F237657

General Info

Members Datasets Scaffolds Average Seq Length
161 84 160 277

Family's Representative Sequence

Representative Sequence 3300046472|Ga0495580_0312964|Ga0495580_0312964_45_935
Length 296
Sequence LANPQRALAESATFGQERRMSALQAIVIAILQGATELFPVSSLGHAVVLPALLHWPLDQRSPEFLPFLVMLHLGTATALLAFFWRDWWSLATGVLGLASPHQISESRRVFLLIVIATIPAVIVGFLLEKFVRGLFGTPLVAAVFLMVNAVLLLAGEKLRGHSHRPLAGLTMMDALTIGCWQCTALIPGISRSGATIVGGLLRGIDHEGAAHFSFLIATPIILGATVLEVPHLLHESVPAGVFELSLVAAVLAGITAYASTWFLMRYFRQHDAWALNPFAYYCAVIGAGSLLLLLVG

Samples

Sample ID Description Type Environment
1 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
13 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
14 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
15 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
16 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
17 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
18 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
19 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
20 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
21 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
22 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
23 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
24 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
25 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
37 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
38 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
39 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
40 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
41 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
42 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
43 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
44 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
45 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
46 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
47 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
48 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
49 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
50 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
51 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
52 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
53 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
54 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
55 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
56 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
57 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
58 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
59 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
60 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
61 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
62 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
63 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
64 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
65 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
66 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
67 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
68 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
69 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
70 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
71 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
72 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
73 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
74 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
75 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
76 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
82 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
83 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
84 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.38
Metatranscriptomes 0
Isolates 0.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.24
Rhizosphere 82.61
Stem 0
Stem Tuber 0
Unclassified 16.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10244301 3300005327 Bacteria 1522
2 Ga0070680_100545757 3300005336 Bacteria 993
3 Ga0070714_100025685 3300005435 Bacteria 4863
4 Ga0070713_100274232 3300005436 Bacteria 1546
5 Ga0070713_100347331 3300005436 Bacteria 1376
6 Ga0070710_10052979 3300005437 Bacteria 2283
7 Ga0070711_100130078 3300005439 Bacteria 1874
8 Ga0070698_100616404 3300005471 Bacteria 1026
9 Ga0070679_100010437 3300005530 Bacteria 8810
10 Ga0070679_100049152 3300005530 Unclassified 4201
11 Ga0070679_100066190 3300005530 Bacteria 3601
12 Ga0070684_100268289 3300005535 Bacteria 1562
13 Ga0070684_100719632 3300005535 Unclassified 931
14 Ga0068856_100032657 3300005614 Bacteria 5097
15 Ga0068856_100077033 3300005614 Unclassified 3304
16 Ga0068856_100101576 3300005614 Bacteria 2869
17 Ga0068856_100197713 3300005614 Bacteria 2025
18 Ga0070715_10247630 3300006163 Bacteria 930
19 Ga0070712_100005704 3300006175 Bacteria 7698
20 Ga0075436_100136965 3300006914 Bacteria 1719
21 Ga0105248_10365260 3300009177 Bacteria 1625
22 Ga0105239_10104109 3300010375 Bacteria 3142
23 Ga0157370_10007187 3300013104 Bacteria 12151
24 Ga0157370_10058144 3300013104 Bacteria 3675
25 Ga0157369_10200790 3300013105 Bacteria 2093
26 Ga0157369_10369327 3300013105 Bacteria 1489
27 Ga0157372_10284583 3300013307 Bacteria 1922
28 Ga0182008_10026778 3300014497 Bacteria 2923
29 Ga0157376_10107668 3300014969 Bacteria 2447
30 Ga0213872_10001085 3300021361 Bacteria 18704
31 Ga0213872_10006731 3300021361 Bacteria 5725
32 Ga0213872_10008958 3300021361 Bacteria 4813
33 Ga0213872_10015941 3300021361 Bacteria 3490
34 Ga0213872_10020632 3300021361 Bacteria 3037
35 Ga0213872_10023397 3300021361 Bacteria 2843
36 Ga0213872_10047213 3300021361 Bacteria 1958
37 Ga0213872_10054198 3300021361 Unclassified 1818
38 Ga0213875_10001358 3300021388 Bacteria 16097
39 Ga0213875_10001769 3300021388 Bacteria 13535
40 Ga0213875_10002046 3300021388 Bacteria 12388
41 Ga0213875_10007955 3300021388 Bacteria 5451
42 Ga0213875_10029267 3300021388 Bacteria 2613
43 Ga0213875_10070923 3300021388 Bacteria 1626
44 Ga0213875_10096687 3300021388 Bacteria 1377
45 Ga0213871_10015741 3300021441 Bacteria 1813
46 Ga0213871_10023480 3300021441 Bacteria 1553
47 Ga0207699_10100580 3300025906 Bacteria 1834
48 Ga0207707_10010489 3300025912 Bacteria 8040
49 Ga0207695_10168996 3300025913 Bacteria 2113
50 Ga0207693_10005883 3300025915 Bacteria 10178
51 Ga0207663_10018893 3300025916 Bacteria 3872
52 Ga0207660_10143720 3300025917 Bacteria 1826
53 Ga0207652_10015315 3300025921 Bacteria 6227
54 Ga0207652_10284937 3300025921 Bacteria 1490
55 Ga0207700_10078452 3300025928 Bacteria 2569
56 Ga0207700_10253871 3300025928 Bacteria 1503
57 Ga0207711_10337145 3300025941 Bacteria 1395
58 Ga0207702_10063173 3300026078 Unclassified 3166
59 Ga0207702_10099025 3300026078 Bacteria 2569
60 Ga0207702_10176349 3300026078 Bacteria 1964
61 Ga0207674_10343613 3300026116 Bacteria 1443
62 Ga0265338_10006442 3300028800 Bacteria 14964
63 Ga0265325_10117164 3300031241 Bacteria 1288
64 Ga0265313_10022661 3300031595 Bacteria 3401
65 Ga0373953_0155617 3300035117 Bacteria 981
66 Ga0373946_0120417 3300035171 Bacteria 1198
67 Ga0373933_0041406 3300035724 Bacteria 2719
68 Ga0373933_0147677 3300035724 Bacteria 1487
69 Ga0373937_0002217 3300036401 Bacteria 16235
70 Ga0373937_0006269 3300036401 Bacteria 10257
71 Ga0373937_0006962 3300036401 Bacteria 9764
72 Ga0373937_0103147 3300036401 Unclassified 2649
73 Ga0373937_0331685 3300036401 Bacteria 1440
74 Ga0373925_0111844 3300037068 Bacteria 2111
75 Ga0373925_0117240 3300037068 Bacteria 2063
76 Ga0436364_0051505 3300037853 Bacteria 8024
77 Ga0436364_0363342 3300037853 Bacteria 39414
78 Ga0436364_0501824 3300037853 Bacteria 29512
79 Ga0436364_0561354 3300037853 Bacteria 3779
80 Ga0436364_0616116 3300037853 Bacteria 1585
81 Ga0436364_0812794 3300037853 Bacteria 1508
82 Ga0436364_0816734 3300037853 Bacteria 1862
83 Ga0436364_0857825 3300037853 Bacteria 2521
84 Ga0436364_0877321 3300037853 Bacteria 3462
85 Ga0436364_1317413 3300037853 Bacteria 1915
86 Ga0436364_1329714 3300037853 Bacteria 45658
87 Ga0436364_1350504 3300037853 Bacteria 1901
88 Ga0436365_1101749 3300039437 Bacteria 3178
89 Ga0436365_1190103 3300039437 Bacteria 2825
90 Ga0436365_1567361 3300039437 Bacteria 1058
91 Ga0436365_1925866 3300039437 Unclassified 1839
92 Ga0436360_0151940 3300039438 Bacteria 1212
93 Ga0436360_0196936 3300039438 Bacteria 4861
94 Ga0436360_0391985 3300039438 Bacteria 7370
95 Ga0436360_0450576 3300039438 Bacteria 4133
96 Ga0436360_0487773 3300039438 Bacteria 4715
97 Ga0436361_0007395 3300039447 Bacteria 7490
98 Ga0436361_0202442 3300039447 Bacteria 3063
99 Ga0436361_0379514 3300039447 Bacteria 1099
100 Ga0436361_0526688 3300039447 Bacteria 2928
101 Ga0436361_0560152 3300039447 Bacteria 4110
102 Ga0436361_0649950 3300039447 Bacteria 6313
103 Ga0436361_0682247 3300039447 Bacteria 18159
104 Ga0436361_0698880 3300039447 Unclassified 2749
105 Ga0436361_0720042 3300039447 Bacteria 1376
106 Ga0436361_0837909 3300039447 Bacteria 3931
107 Ga0436361_0855788 3300039447 Bacteria 5249
108 Ga0436361_0965962 3300039447 Bacteria 3503
109 Ga0436361_1023258 3300039447 Bacteria 1675
110 Ga0436361_1086036 3300039447 Bacteria 2303
111 Ga0436361_1214455 3300039447 Bacteria 3151
112 Ga0436361_1220350 3300039447 Bacteria 4468
113 Ga0436363_1011055 3300039450 Unclassified 1079
114 Ga0436363_1307145 3300039450 Bacteria 1662
115 Ga0436362_0468143 3300039453 Bacteria 2603
116 Ga0436362_0519431 3300039453 Bacteria 1782
117 Ga0466963_0252086 3300044694 Bacteria 1239
118 Ga0466957_0112442 3300044842 Bacteria 1728
119 Ga0466959_0193545 3300045049 Bacteria 1418
120 Ga0466958_0001504 3300045836 Bacteria 11148
121 Ga0466967_0323479 3300045976 Bacteria 1488
122 Ga0495629_0090098 3300046459 Bacteria 2140
123 Ga0495651_0003738 3300046462 Bacteria 11655
124 Ga0495651_0092102 3300046462 Bacteria 2271
125 Ga0495580_0312964 3300046472 Bacteria 1068
126 Ga0495664_0005493 3300046477 Bacteria 6959
127 Ga0495608_0023736 3300046511 Bacteria 4199
128 Ga0495628_0112893 3300046516 Bacteria 2089
129 Ga0495628_0273337 3300046516 Bacteria 1256
130 Ga0495652_0086529 3300046529 Bacteria 2573
131 Ga0495652_0101094 3300046529 Bacteria 2338
132 Ga0495640_0147199 3300046533 Bacteria 1515
133 Ga0495640_0280668 3300046533 Bacteria 1037
134 Ga0495587_0010075 3300046536 Bacteria 6031
135 Ga0495645_0002159 3300046543 Bacteria 13352
136 Ga0495667_0006216 3300046559 Bacteria 8090
137 Ga0495667_0009870 3300046559 Bacteria 6467
138 Ga0495634_0188744 3300046642 Bacteria 1287
139 Ga0495599_0063132 3300046678 Bacteria 2314
140 Ga0495646_0127445 3300046680 Unclassified 1435
141 Ga0495600_0126246 3300046809 Unclassified 1664
142 Ga0495674_0040347 3300047319 Bacteria 4176
143 Ga0495675_0005276 3300047444 Bacteria 7871
144 Ga0495675_0209751 3300047444 Unclassified 1183
145 Ga0495602_0000709 3300048088 Bacteria 31388
146 Ga0495602_0059807 3300048088 Bacteria 3324
147 Ga0496112_0246604 3300048915 Unclassified 1738
148 Ga0496115_0111933 3300048918 Bacteria 2243
149 Ga0496119_0111776 3300048922 Bacteria 1515
150 Ga0501037_0154883 3300049573 Bacteria 1636
151 Ga0501038_0123167 3300049574 Bacteria 2136
152 Ga0501047_0067553 3300049581 Bacteria 3445
153 Ga0501074_0082802 3300049590 Bacteria 2301
154 Ga0501080_0370319 3300049742 Bacteria 1292
155 Ga0501044_0218899 3300049823 Bacteria 1855
156 Ga0495601_0024075 3300053077 Bacteria 3747
157 Ga0495601_0239809 3300053077 Bacteria 1184
158 Ga0495612_0008465 3300053078 Bacteria 4172
159 Ga0495595_0014661 3300053084 Bacteria 3329
160 Ga0495595_0313333 3300053084 Bacteria 790

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037853 Ga0436364_0561354 Ga0436364_0561354_350_1201 235
2 3300036401 Ga0373937_0331685 Ga0373937_0331685_21_770 248
3 3300053084 Ga0495595_0313333 Ga0495595_0313333_23_772 248
4 3300005336 Ga0070680_100545757 Ga0070680_1005457571 252
5 3300045976 Ga0466967_0323479 Ga0466967_0323479_67_900 253
6 3300039453 Ga0436362_0519431 Ga0436362_0519431_292_1143 255
7 3300039438 Ga0436360_0391985 Ga0436360_0391985_4373_5224 257
8 3300039450 Ga0436363_1011055 Ga0436363_1011055_13_810 264
9 3300021361 Ga0213872_10015941 Ga0213872_100159413 265
10 3300039447 Ga0436361_0560152 Ga0436361_0560152_2747_3592 265
11 3300021388 Ga0213875_10029267 Ga0213875_100292672 266
12 3300037853 Ga0436364_0501824 Ga0436364_0501824_11773_12615 266
13 3300037853 Ga0436364_0857825 Ga0436364_0857825_1662_2498 266
14 3300021388 Ga0213875_10001358 Ga0213875_1000135811 267
15 3300037853 Ga0436364_0363342 Ga0436364_0363342_32795_33628 267
16 3300039437 Ga0436365_1925866 Ga0436365_1925866_215_1051 267
17 3300039447 Ga0436361_1023258 Ga0436361_1023258_397_1233 267
18 3300021361 Ga0213872_10001085 Ga0213872_100010856 268
19 3300039447 Ga0436361_0965962 Ga0436361_0965962_1078_1923 268
20 3300039447 Ga0436361_1214455 Ga0436361_1214455_1623_2468 268
21 3300021361 Ga0213872_10006731 Ga0213872_100067314 270
22 3300039447 Ga0436361_0649950 Ga0436361_0649950_1943_2788 270
23 3300039447 Ga0436361_1086036 Ga0436361_1086036_48_893 270
24 3300044694 Ga0466963_0252086 Ga0466963_0252086_17_865 270
25 3300039447 Ga0436361_1220350 Ga0436361_1220350_418_1254 274
26 3300049742 Ga0501080_0370319 Ga0501080_0370319_223_1065 274
27 3300005535 Ga0070684_100719632 Ga0070684_1007196321 275
28 3300005614 Ga0068856_100077033 Ga0068856_1000770332 275
29 3300005614 Ga0068856_100101576 Ga0068856_1001015762 275
30 3300009177 Ga0105248_10365260 Ga0105248_103652602 275
31 3300010375 Ga0105239_10104109 Ga0105239_101041092 275
32 3300013105 Ga0157369_10369327 Ga0157369_103693272 275
33 3300014969 Ga0157376_10107668 Ga0157376_101076683 275
34 3300025941 Ga0207711_10337145 Ga0207711_103371452 275
35 3300026078 Ga0207702_10063173 Ga0207702_100631734 275
36 3300026078 Ga0207702_10176349 Ga0207702_101763492 275
37 3300035724 Ga0373933_0147677 Ga0373933_0147677_67_897 275
38 3300037068 Ga0373925_0111844 Ga0373925_0111844_239_1069 275
39 3300037853 Ga0436364_0616116 Ga0436364_0616116_671_1501 275
40 3300046462 Ga0495651_0003738 Ga0495651_0003738_3676_4506 275
41 3300046516 Ga0495628_0273337 Ga0495628_0273337_89_919 275
42 3300046529 Ga0495652_0101094 Ga0495652_0101094_1076_1906 275
43 3300046533 Ga0495640_0280668 Ga0495640_0280668_12_842 275
44 3300046678 Ga0495599_0063132 Ga0495599_0063132_1237_2067 275
45 3300048915 Ga0496112_0246604 Ga0496112_0246604_527_1357 275
46 iso_pu_bacteria 2883291878 2883294481 275
47 3300005530 Ga0070679_100049152 Ga0070679_1000491523 276
48 3300021361 Ga0213872_10008958 Ga0213872_100089586 276
49 3300021361 Ga0213872_10047213 Ga0213872_100472132 276
50 3300021388 Ga0213875_10002046 Ga0213875_100020464 276
51 3300021388 Ga0213875_10070923 Ga0213875_100709232 276
52 3300021388 Ga0213875_10096687 Ga0213875_100966871 276
53 3300021441 Ga0213871_10023480 Ga0213871_100234803 276
54 3300025928 Ga0207700_10253871 Ga0207700_102538713 276
55 3300028800 Ga0265338_10006442 Ga0265338_100064426 276
56 3300031241 Ga0265325_10117164 Ga0265325_101171642 276
57 3300031595 Ga0265313_10022661 Ga0265313_100226611 276
58 3300035117 Ga0373953_0155617 Ga0373953_0155617_26_859 276
59 3300035171 Ga0373946_0120417 Ga0373946_0120417_267_1100 276
60 3300036401 Ga0373937_0103147 Ga0373937_0103147_479_1318 276
61 3300037068 Ga0373925_0117240 Ga0373925_0117240_1108_1941 276
62 3300037853 Ga0436364_0816734 Ga0436364_0816734_554_1387 276
63 3300037853 Ga0436364_0877321 Ga0436364_0877321_1691_2524 276
64 3300037853 Ga0436364_1317413 Ga0436364_1317413_36_869 276
65 3300037853 Ga0436364_1350504 Ga0436364_1350504_618_1451 276
66 3300039437 Ga0436365_1190103 Ga0436365_1190103_769_1602 276
67 3300039437 Ga0436365_1567361 Ga0436365_1567361_139_987 276
68 3300039438 Ga0436360_0151940 Ga0436360_0151940_334_1167 276
69 3300039438 Ga0436360_0487773 Ga0436360_0487773_2767_3600 276
70 3300039447 Ga0436361_0379514 Ga0436361_0379514_115_957 276
71 3300039447 Ga0436361_0698880 Ga0436361_0698880_588_1430 276
72 3300039447 Ga0436361_0720042 Ga0436361_0720042_275_1111 276
73 3300046472 Ga0495580_0312964 Ga0495580_0312964_45_935 276
74 3300047444 Ga0495675_0209751 Ga0495675_0209751_318_1157 276
75 3300048088 Ga0495602_0059807 Ga0495602_0059807_410_1249 276
76 3300048922 Ga0496119_0111776 Ga0496119_0111776_502_1335 276
77 3300049573 Ga0501037_0154883 Ga0501037_0154883_123_971 276
78 3300049574 Ga0501038_0123167 Ga0501038_0123167_1081_1929 276
79 3300049581 Ga0501047_0067553 Ga0501047_0067553_2091_2939 276
80 3300049823 Ga0501044_0218899 Ga0501044_0218899_809_1657 276
81 3300053077 Ga0495601_0239809 Ga0495601_0239809_306_1139 276
82 3300005435 Ga0070714_100025685 Ga0070714_1000256853 277
83 3300005436 Ga0070713_100274232 Ga0070713_1002742322 277
84 3300005436 Ga0070713_100347331 Ga0070713_1003473311 277
85 3300005437 Ga0070710_10052979 Ga0070710_100529793 277
86 3300005439 Ga0070711_100130078 Ga0070711_1001300782 277
87 3300005614 Ga0068856_100032657 Ga0068856_1000326574 277
88 3300006163 Ga0070715_10247630 Ga0070715_102476301 277
89 3300006175 Ga0070712_100005704 Ga0070712_1000057045 277
90 3300006914 Ga0075436_100136965 Ga0075436_1001369652 277
91 3300013105 Ga0157369_10200790 Ga0157369_102007902 277
92 3300021361 Ga0213872_10020632 Ga0213872_100206324 277
93 3300021361 Ga0213872_10023397 Ga0213872_100233974 277
94 3300021361 Ga0213872_10054198 Ga0213872_100541982 277
95 3300021388 Ga0213875_10001769 Ga0213875_100017695 277
96 3300021388 Ga0213875_10007955 Ga0213875_100079555 277
97 3300021441 Ga0213871_10015741 Ga0213871_100157411 277
98 3300025906 Ga0207699_10100580 Ga0207699_101005802 277
99 3300025915 Ga0207693_10005883 Ga0207693_100058836 277
100 3300025916 Ga0207663_10018893 Ga0207663_100188934 277
101 3300025928 Ga0207700_10078452 Ga0207700_100784523 277
102 3300026078 Ga0207702_10099025 Ga0207702_100990252 277
103 3300036401 Ga0373937_0006269 Ga0373937_0006269_7693_8529 277
104 3300036401 Ga0373937_0006962 Ga0373937_0006962_5386_6222 277
105 3300037853 Ga0436364_0051505 Ga0436364_0051505_3524_4360 277
106 3300037853 Ga0436364_1329714 Ga0436364_1329714_3031_3885 277
107 3300039438 Ga0436360_0196936 Ga0436360_0196936_2543_3379 277
108 3300039447 Ga0436361_0007395 Ga0436361_0007395_2078_2923 277
109 3300039447 Ga0436361_0202442 Ga0436361_0202442_932_1777 277
110 3300039447 Ga0436361_0526688 Ga0436361_0526688_1124_1969 277
111 3300039447 Ga0436361_0682247 Ga0436361_0682247_14342_15187 277
112 3300039447 Ga0436361_0837909 Ga0436361_0837909_1478_2323 277
113 3300039447 Ga0436361_0855788 Ga0436361_0855788_3362_4207 277
114 3300039450 Ga0436363_1307145 Ga0436363_1307145_125_961 277
115 3300039453 Ga0436362_0468143 Ga0436362_0468143_908_1753 277
116 3300044842 Ga0466957_0112442 Ga0466957_0112442_657_1505 277
117 3300045049 Ga0466959_0193545 Ga0466959_0193545_357_1202 277
118 3300045836 Ga0466958_0001504 Ga0466958_0001504_4978_5826 277
119 3300046459 Ga0495629_0090098 Ga0495629_0090098_586_1422 277
120 3300046462 Ga0495651_0092102 Ga0495651_0092102_536_1372 277
121 3300046477 Ga0495664_0005493 Ga0495664_0005493_2016_2852 277
122 3300046511 Ga0495608_0023736 Ga0495608_0023736_776_1612 277
123 3300046516 Ga0495628_0112893 Ga0495628_0112893_100_936 277
124 3300046529 Ga0495652_0086529 Ga0495652_0086529_209_1045 277
125 3300046533 Ga0495640_0147199 Ga0495640_0147199_435_1271 277
126 3300046536 Ga0495587_0010075 Ga0495587_0010075_323_1159 277
127 3300046543 Ga0495645_0002159 Ga0495645_0002159_7671_8507 277
128 3300046559 Ga0495667_0006216 Ga0495667_0006216_2148_2984 277
129 3300046559 Ga0495667_0009870 Ga0495667_0009870_5098_5934 277
130 3300046642 Ga0495634_0188744 Ga0495634_0188744_132_968 277
131 3300046680 Ga0495646_0127445 Ga0495646_0127445_154_990 277
132 3300046809 Ga0495600_0126246 Ga0495600_0126246_352_1188 277
133 3300047319 Ga0495674_0040347 Ga0495674_0040347_2113_2949 277
134 3300047444 Ga0495675_0005276 Ga0495675_0005276_6572_7408 277
135 3300048088 Ga0495602_0000709 Ga0495602_0000709_24122_24958 277
136 3300053077 Ga0495601_0024075 Ga0495601_0024075_2573_3409 277
137 3300053078 Ga0495612_0008465 Ga0495612_0008465_2493_3329 277
138 3300053084 Ga0495595_0014661 Ga0495595_0014661_751_1587 277
139 3300037853 Ga0436364_0812794 Ga0436364_0812794_202_1050 278
140 3300039437 Ga0436365_1101749 Ga0436365_1101749_2298_3146 278
141 3300039438 Ga0436360_0450576 Ga0436360_0450576_3066_3914 278
142 3300005327 Ga0070658_10244301 Ga0070658_102443012 279
143 3300005471 Ga0070698_100616404 Ga0070698_1006164041 279
144 3300005530 Ga0070679_100010437 Ga0070679_1000104372 279
145 3300005530 Ga0070679_100066190 Ga0070679_1000661903 279
146 3300005535 Ga0070684_100268289 Ga0070684_1002682892 279
147 3300005614 Ga0068856_100197713 Ga0068856_1001977132 279
148 3300013104 Ga0157370_10007187 Ga0157370_100071877 279
149 3300013104 Ga0157370_10058144 Ga0157370_100581443 279
150 3300013307 Ga0157372_10284583 Ga0157372_102845832 279
151 3300014497 Ga0182008_10026778 Ga0182008_100267782 279
152 3300025912 Ga0207707_10010489 Ga0207707_100104893 279
153 3300025913 Ga0207695_10168996 Ga0207695_101689963 279
154 3300025917 Ga0207660_10143720 Ga0207660_101437202 279
155 3300025921 Ga0207652_10015315 Ga0207652_100153155 279
156 3300025921 Ga0207652_10284937 Ga0207652_102849372 279
157 3300026116 Ga0207674_10343613 Ga0207674_103436131 279
158 3300035724 Ga0373933_0041406 Ga0373933_0041406_1803_2642 279
159 3300036401 Ga0373937_0002217 Ga0373937_0002217_4453_5292 279
160 3300048918 Ga0496115_0111933 Ga0496115_0111933_1179_2018 279
161 3300049590 Ga0501074_0082802 Ga0501074_0082802_1412_2254 279

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02673

BacA

Bacitracin resistance protein BacA

25

288

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fmt-assembly1.cif.gz_A imisx-ep of hg-baca soaking sad 0.8853 3 271
6fmt-assembly1.cif.gz_A imisx-ep of hg-baca soaking sad 0.8555 3 271
6cb2-assembly1.cif.gz_A crystal structure of escherichia coli uppp 0.8306 3 276
6cb2-assembly1.cif.gz_A crystal structure of escherichia coli uppp 0.8161 3 276
6i1z-assembly1.cif.gz_A outward facing structure of apo cst 0.3793 1 278
ID Description Score Start End Superfamily
af_Q9VDS2_130_561_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.4057 36 272 1.20.1250.20
af_Q8IIV4_234_415_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3957 48 274 1.20.1250.20
af_Q8MRB2_303_503_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3945 29 272 1.20.1250.20
af_A0A1D6EX20_272_408_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3923 57 206 1.20.1250.20
af_Q4DUI2_260_469_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.3916 40 272 1.20.1250.20
ID Description Score Start End GO Terms
AF-Q5FUS6-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.9688 1 276 GO:0005886
GO:0008360
GO:0009252
GO:0046677
GO:0050380
GO:0071555
AF-A0A1L3RX49-F1-model_v4 deleted 0.9582 1 277
AF-A0A1D2RHW4-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl pyrophosphate phosphatase) 0.958 1 277 GO:0005886
GO:0050380
AF-A0A177GBT7-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.9563 1 216 GO:0005886
GO:0046677
GO:0050380
AF-Q5FUS6-F1-model_v4 Undecaprenyl-diphosphatase (EC 3.6.1.27) (Bacitracin resistance protein) (Undecaprenyl pyrophosphate phosphatase) 0.9552 1 276 GO:0005886
GO:0008360
GO:0009252
GO:0046677
GO:0050380
GO:0071555

Feature Viewer

pLDDT pTM Quality
89.51 0.88 High
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Predicted Structure (AlphaFold2)

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