F239659

General Info

Members Datasets Scaffolds Average Seq Length
162 132 324 504

Family's Representative Sequence

Representative Sequence 3300031911|Ga0307412_10011869|Ga0307412_100118694
Length 553
Sequence LPKLSQSKKGFPLKSGCEQFNVEKALSRFKNLDKADEKLISLKKTYDILVIGSGLGGLVSALILAKEGLKVCVLEKNNQYGGNLQTFSRDKLIFDTGVHYLGGLSKGQNLHQFFSYLEIIDDLELQKMDENGYDKITFEGDKIEYPHAQGYENFVEQLSKYFPDERENIENYCEEIQRICNHFPRYNVIGKDNYNEEILHLNTKRFIESITSNKKLQSVLLGSNFLYAGDSENVPFYVHALTVNSYIQSAYKCVKGGSQISKLLIRKLRQYGAEVHKHSEVSEFIFNENNTLIGAKTKSGQEYSAKQIISNIEIRSTIKLIGEDRLKKSFLNRVLSWEPVSSCFSVYLVLKPHAVLNFNYNIYHYSSEELVWNAYRYDKQAWPETYMLSSTASKHHPEFAESLTAISYMDFDEVKKWQNTFNTVADEHGRGKQYEKFKQEKAEKMIDVLEKKIPDLRDSIKNIYTSSPLSYRDYIGSFDGNMYGYIKSSENPLKTMVSPRTKIDNLFLTGQSVNMHRILGCTIGAFNTCAEILGKDVVDQRLTEMINKNRSEK

Samples

Sample ID Description Type Environment
1 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
22 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
23 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
34 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
35 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
36 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
37 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
38 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
39 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
40 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
60 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
61 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
65 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
66 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
67 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
68 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
69 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
70 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
71 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
72 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
73 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
74 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
75 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
76 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
77 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
78 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
79 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
80 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
81 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
82 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
83 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
84 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
85 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
86 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
87 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
88 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
89 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
90 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
91 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
92 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
93 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
94 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
95 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
96 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
97 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
98 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
99 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
100 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
101 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
102 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
103 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
104 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
105 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
106 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
107 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
108 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
109 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
110 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
111 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
112 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
113 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
114 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
115 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
116 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
117 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
118 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
119 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
120 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
121 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
122 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
123 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
124 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
125 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
126 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
127 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
128 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
129 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
130 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
131 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
132 8036736890 Flavobacterium dauae TCH3-2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.6
Metatranscriptomes 0
Isolates 28.4

Biome Distribution

Category Percentage (%)
Aerial Root 1.23
Bulb 0
Endosphere 2.47
Nodule 0.62
Rhizoplane 0
Rhizosphere 74.69
Stem 0
Stem Tuber 0
Unclassified 3.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307412_10011869 3300031911 Bacteria 5059
2 JGI24741J21665_1002214 3300001915 Bacteria 5160
3 rootH2_10050665 3300003320 Bacteria 10767
4 rootL2_10098668 3300003322 Unclassified 4722
5 rootH1_10016087 3300003323 Bacteria 6929
6 rootH1_10078422 3300003323 Bacteria 6499
7 Ga0065714_10064456 3300005288 Bacteria 70947
8 Ga0065704_10070819 3300005289 Bacteria 15708
9 Ga0065704_10071263 3300005289 Bacteria 12153
10 Ga0070683_100001467 3300005329 Bacteria 18149
11 Ga0070670_100042565 3300005331 Bacteria 3904
12 Ga0068869_100031852 3300005334 Unclassified 3712
13 Ga0068869_100033023 3300005334 Bacteria 3651
14 Ga0070682_100000133 3300005337 Bacteria 61302
15 Ga0068868_100020243 3300005338 Bacteria 4995
16 Ga0070668_100047370 3300005347 Bacteria 3305
17 Ga0070668_100055532 3300005347 Bacteria 3057
18 Ga0070671_100102074 3300005355 Bacteria 2407
19 Ga0070667_100003107 3300005367 Bacteria 14285
20 Ga0070667_100146769 3300005367 Bacteria 2069
21 Ga0070678_100087826 3300005456 Unclassified 2375
22 Ga0070665_100038752 3300005548 Bacteria 4791
23 Ga0068861_100044964 3300005719 Bacteria 3323
24 Ga0068863_100011948 3300005841 Bacteria 8390
25 Ga0068860_100009371 3300005843 Bacteria 9734
26 Ga0068860_100048035 3300005843 Bacteria 4068
27 Ga0068862_100059604 3300005844 Bacteria 3278
28 Ga0105244_10000013 3300009036 Bacteria 258350
29 Ga0105250_10018414 3300009092 Bacteria 2828
30 Ga0105242_10014637 3300009176 Bacteria 6073
31 Ga0105249_10053190 3300009553 Bacteria 3701
32 Ga0157373_10000017 3300013100 Bacteria 173186
33 Ga0157371_10075859 3300013102 Bacteria 2381
34 Ga0157371_10093369 3300013102 Bacteria 2132
35 Ga0157371_10124604 3300013102 Bacteria 1832
36 Ga0157370_10004398 3300013104 Bacteria 16165
37 Ga0157370_10135374 3300013104 Bacteria 2297
38 Ga0157369_10000136 3300013105 Bacteria 104612
39 Ga0157374_10027367 3300013296 Bacteria 5142
40 Ga0157378_10005955 3300013297 Bacteria 10688
41 Ga0157378_10011173 3300013297 Bacteria 7855
42 Ga0157375_10000334 3300013308 Bacteria 42495
43 Ga0182008_10000036 3300014497 Bacteria 130349
44 Ga0182006_1000001 3300015261 Bacteria 1091090
45 Ga0163161_10038188 3300017792 Bacteria 3444
46 Ga0209436_101488 3300025208 Bacteria 8112
47 Ga0209130_1000665 3300025284 Bacteria 31274
48 Ga0209675_1000034 3300025291 Bacteria 267827
49 Ga0207426_1000051 3300025302 Bacteria 391700
50 Ga0207655_1000031 3300025728 Bacteria 392265
51 Ga0207642_10086597 3300025899 Bacteria 1536
52 Ga0207680_10012441 3300025903 Bacteria 4333
53 Ga0207645_10000496 3300025907 Bacteria 32469
54 Ga0207643_10044255 3300025908 Unclassified 2513
55 Ga0207709_10000216 3300025935 Bacteria 73193
56 Ga0207691_10014972 3300025940 Bacteria 7386
57 Ga0207689_10005978 3300025942 Bacteria 10766
58 Ga0207689_10021338 3300025942 Bacteria 5446
59 Ga0207689_10174079 3300025942 Bacteria 1775
60 Ga0207712_10055174 3300025961 Bacteria 2793
61 Ga0207668_10016486 3300025972 Bacteria 4612
62 Ga0207668_10124703 3300025972 Unclassified 1956
63 Ga0207658_10075453 3300025986 Bacteria 2565
64 Ga0207677_10014294 3300026023 Bacteria 4631
65 Ga0207641_10044315 3300026088 Bacteria 3741
66 Ga0207648_10024163 3300026089 Bacteria 5430
67 Ga0207676_10034680 3300026095 Bacteria 3822
68 Ga0207683_10012816 3300026121 Bacteria 7156
69 Ga0268264_10017599 3300028381 Bacteria 5853
70 Ga0268264_10151803 3300028381 Bacteria 2077
71 Ga0265327_10000298 3300031251 Bacteria 96149
72 Ga0307412_10000215 3300031911 Bacteria 39239
73 Ga0307416_100000016 3300032002 Bacteria 205465
74 Ga0307414_10000224 3300032004 Bacteria 37374
75 Ga0307414_10001937 3300032004 Bacteria 10711
76 Ga0307414_10132563 3300032004 Bacteria 1937
77 Ga0395905_0000051 3300037471 Bacteria 223416
78 Ga0439465_0000003 3300041413 Bacteria 72076
79 Ga0451577_0149501 3300042876 Bacteria 2101
80 Ga0453684_0021049 3300044712 Bacteria 9776
81 Ga0453684_0063449 3300044712 Bacteria 4725
82 Ga0466959_0023333 3300045049 Bacteria 4578
83 Ga0495627_000030 3300046453 Bacteria 228883
84 Ga0495606_0004789 3300046507 Bacteria 13302
85 Ga0495606_0007660 3300046507 Bacteria 9577
86 Ga0495610_0000036 3300046512 Bacteria 186904
87 Ga0495632_0002228 3300046519 Bacteria 14958
88 Ga0495663_0000014 3300046525 Bacteria 149657
89 Ga0495654_0000142 3300046530 Bacteria 74610
90 Ga0495609_0000137 3300046538 Bacteria 77538
91 Ga0495633_0000001 3300046558 Bacteria 801972
92 Ga0495633_0001869 3300046558 Bacteria 15433
93 Ga0495625_0000818 3300046660 Bacteria 42880
94 Ga0495686_0000327 3300047472 Bacteria 78430
95 Ga0495686_0000955 3300047472 Bacteria 35740
96 Ga0496116_0000068 3300048919 Bacteria 259724
97 Ga0496117_0000062 3300048920 Bacteria 257535
98 Ga0496118_0000113 3300048921 Bacteria 150726
99 Ga0496119_0000024 3300048922 Bacteria 257750
100 Ga0496121_0000020 3300048924 Bacteria 498732
101 Ga0496121_0052423 3300048924 Bacteria 3427
102 Ga0496122_0000245 3300048925 Bacteria 121737
103 Ga0496122_0000530 3300048925 Bacteria 79156
104 Ga0496122_0000666 3300048925 Bacteria 69147
105 Ga0496122_0002619 3300048925 Bacteria 25205
106 Ga0496122_0003993 3300048925 Bacteria 18811
107 Ga0496123_0000474 3300048926 Bacteria 69869
108 Ga0496123_0006331 3300048926 Bacteria 11497
109 Ga0496123_0013299 3300048926 Bacteria 6928
110 Ga0496124_0002620 3300048927 Bacteria 23177
111 Ga0496125_0000454 3300048928 Bacteria 73947
112 Ga0496125_0008307 3300048928 Bacteria 10902
113 Ga0496125_0023347 3300048928 Bacteria 5711
114 Ga0496126_0000957 3300048929 Bacteria 49532
115 Ga0501241_000004 3300049758 Bacteria 177326
116 Ga0501269_000256 3300049766 Bacteria 15195
117 2511233481 2511231000 Bacteria 4488346
118 2585141934 2582581278 Bacteria 5296881
119 2585157766 2582581281 Bacteria 4487904
120 2585162101 2582581282 Bacteria 4495830
121 2585426370 2582581873 Bacteria 3032664
122 2587680331 2585428045 Bacteria 5203023
123 2587747414 2585428060 Bacteria 5304711
124 2587752797 2585428061 Bacteria 3939663
125 2587866444 2585428095 Bacteria 3789702
126 2587944746 2585428115 Bacteria 4420269
127 2588212033 2585428182 Bacteria 5007281
128 2588216303 2585428183 Bacteria 5166119
129 2588221127 2585428184 Bacteria 4978681
130 2588225577 2585428185 Bacteria 4969476
131 2588231955 2585428187 Bacteria 4629388
132 2588448084 2588253712 Bacteria 5403181
133 2590604014 2588254255 Bacteria 5014294
134 2590609363 2588254257 Bacteria 5436094
135 2729203090 2728369107 Bacteria 5082720
136 2740059645 2739367874 Bacteria 4872888
137 2753674767 2751185877 Bacteria 4921427
138 2765574824 2765235839 Bacteria 5314748
139 2772606172 2772190705 Bacteria 4666226
140 2775675033 2775506739 Bacteria 3855222
141 2816876109 2816332188 Bacteria 5133218
142 2819680819 2818991460 Bacteria 7595395
143 2821137012 2821136567 Bacteria 8080116
144 2842087088 2842083920 Bacteria 4857652
145 2871721570 2871720351 Bacteria 4862476
146 2889294623 2889290771 Bacteria 5530962
147 2904468246 2904467357 Bacteria 8057758
148 2906002736 2905999023 Bacteria 4591259
149 2919100291 2919097161 Bacteria 3860339
150 2919402080 2919399522 Bacteria 5164947
151 2929178852 2929177148 Bacteria 7883697
152 2945925506 2945924605 Bacteria 4296724
153 2945981256 2945977869 Bacteria 7777518
154 2946019343 2946013367 Bacteria 7766675
155 2946023284 2946019816 Bacteria 4621265
156 2965322533 2965320100 Bacteria 3975600
157 2977244342 2977243572 Bacteria 4374394
158 2984573766 2984572630 Bacteria 4186940
159 2984607206 2984606641 Bacteria 4186971
160 2993375811 2993372514 Bacteria 4214139
161 2993482673 2993480792 Bacteria 4022225
162 8036736922 8036736890 Bacteria 2944828
163 Ga0307412_10011869
164 JGI24741J21665_1002214
165 rootH2_10050665
166 rootL2_10098668
167 rootH1_10016087
168 rootH1_10078422
169 Ga0065714_10064456
170 Ga0065704_10070819
171 Ga0065704_10071263
172 Ga0070683_100001467
173 Ga0070670_100042565
174 Ga0068869_100031852
175 Ga0068869_100033023
176 Ga0070682_100000133
177 Ga0068868_100020243
178 Ga0070668_100047370
179 Ga0070668_100055532
180 Ga0070671_100102074
181 Ga0070667_100003107
182 Ga0070667_100146769
183 Ga0070678_100087826
184 Ga0070665_100038752
185 Ga0068861_100044964
186 Ga0068863_100011948
187 Ga0068860_100009371
188 Ga0068860_100048035
189 Ga0068862_100059604
190 Ga0105244_10000013
191 Ga0105250_10018414
192 Ga0105242_10014637
193 Ga0105249_10053190
194 Ga0157373_10000017
195 Ga0157371_10075859
196 Ga0157371_10093369
197 Ga0157371_10124604
198 Ga0157370_10004398
199 Ga0157370_10135374
200 Ga0157369_10000136
201 Ga0157374_10027367
202 Ga0157378_10005955
203 Ga0157378_10011173
204 Ga0157375_10000334
205 Ga0182008_10000036
206 Ga0182006_1000001
207 Ga0163161_10038188
208 Ga0209436_101488
209 Ga0209130_1000665
210 Ga0209675_1000034
211 Ga0207426_1000051
212 Ga0207655_1000031
213 Ga0207642_10086597
214 Ga0207680_10012441
215 Ga0207645_10000496
216 Ga0207643_10044255
217 Ga0207709_10000216
218 Ga0207691_10014972
219 Ga0207689_10005978
220 Ga0207689_10021338
221 Ga0207689_10174079
222 Ga0207712_10055174
223 Ga0207668_10016486
224 Ga0207668_10124703
225 Ga0207658_10075453
226 Ga0207677_10014294
227 Ga0207641_10044315
228 Ga0207648_10024163
229 Ga0207676_10034680
230 Ga0207683_10012816
231 Ga0268264_10017599
232 Ga0268264_10151803
233 Ga0265327_10000298
234 Ga0307412_10000215
235 Ga0307416_100000016
236 Ga0307414_10000224
237 Ga0307414_10001937
238 Ga0307414_10132563
239 Ga0395905_0000051
240 Ga0439465_0000003
241 Ga0451577_0149501
242 Ga0453684_0021049
243 Ga0453684_0063449
244 Ga0466959_0023333
245 Ga0495627_000030
246 Ga0495606_0004789
247 Ga0495606_0007660
248 Ga0495610_0000036
249 Ga0495632_0002228
250 Ga0495663_0000014
251 Ga0495654_0000142
252 Ga0495609_0000137
253 Ga0495633_0000001
254 Ga0495633_0001869
255 Ga0495625_0000818
256 Ga0495686_0000327
257 Ga0495686_0000955
258 Ga0496116_0000068
259 Ga0496117_0000062
260 Ga0496118_0000113
261 Ga0496119_0000024
262 Ga0496121_0000020
263 Ga0496121_0052423
264 Ga0496122_0000245
265 Ga0496122_0000530
266 Ga0496122_0000666
267 Ga0496122_0002619
268 Ga0496122_0003993
269 Ga0496123_0000474
270 Ga0496123_0006331
271 Ga0496123_0013299
272 Ga0496124_0002620
273 Ga0496125_0000454
274 Ga0496125_0008307
275 Ga0496125_0023347
276 Ga0496126_0000957
277 Ga0501241_000004
278 Ga0501269_000256
279 2511233481
280 2585141934
281 2585157766
282 2585162101
283 2585426370
284 2587680331
285 2587747414
286 2587752797
287 2587866444
288 2587944746
289 2588212033
290 2588216303
291 2588221127
292 2588225577
293 2588231955
294 2588448084
295 2590604014
296 2590609363
297 2729203090
298 2740059645
299 2753674767
300 2765574824
301 2772606172
302 2775675033
303 2816876109
304 2819680819
305 2821137012
306 2842087088
307 2871721570
308 2889294623
309 2904468246
310 2906002736
311 2919100291
312 2919402080
313 2929178852
314 2945925506
315 2945981256
316 2946019343
317 2946023284
318 2965322533
319 2977244342
320 2984573766
321 2984607206
322 2993375811
323 2993482673
324 8036736922

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

50

117

0.98

PF00890

FAD_binding_2

FAD binding domain

47

88

0.95

PF01494

FAD_binding_3

FAD binding domain

45

84

0.93

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

55

404

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ajj-assembly3.cif.gz_B-2 crystal structure of the disulfide reductase mera from staphylococcus aureus 0.9433 5 39
4zn0-assembly2.cif.gz_B structure of the nadph-dependent thioredoxin reductase from methanosarcina mazei 0.9342 3 37
3itj-assembly1.cif.gz_D-2 crystal structure of saccharomyces cerevisiae thioredoxin reductase 1 (trr1) 0.918 4 34
3ado-assembly1.cif.gz_A crystal structure of the rabbit l-gulonate 3-dehydrogenase 0.9172 6 37
7o1g-assembly1.cif.gz_A-2 structure of mycobacterium tuberculosis beta-oxidation trifunctional enzyme alpha-e141a-h462a, beta-c92a mutant 0.9162 5 36
ID Description Score Start End Superfamily
4zn0A01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9817 4 36 3.50.50.60
2ivdA01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.969 6 41 3.50.50.60
4i58A01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9683 5 40 3.50.50.60
5z2gB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.968 6 34 3.50.50.60
4dnaB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9621 6 39 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A381FM68-F1-model_v4 Protoporphyrinogen oxidase 0.988 1 344 GO:0005092
GO:0007264
AF-A0A7K3MXR8-F1-model_v4 NAD(P)/FAD-dependent oxidoreductase 0.9813 1 443
AF-A0A2K1E300-F1-model_v4 All-trans-retinol 13,14-reductase 0.9801 1 504
AF-A0A1M3GHP9-F1-model_v4 deleted 0.9793 3 501
AF-L1PPM2-F1-model_v4 FAD dependent oxidoreductase 0.9793 3 399 GO:0016491

Map