F240653

General Info

Members Datasets Scaffolds Average Seq Length
163 108 326 326

Family's Representative Sequence

Representative Sequence 3300003320|rootH2_10171903|rootH2_101719032
Length 372
Sequence MSIKRWIDLRPDFPVGLYSCAIVIRGENPRPATRFQPMSDPVPSIANATIEEIGEVLKNHESFVLISHIRPDGDAIGSQLALGYALIAAGKKVRLINEDGLPESLAFMAGSELIETPPVEPLDVEVAIALDTATRPRLGDHALNAASKAKLWLNIDHHISNPKYGDLNLIDSTSPATGQILYKLILALGLPLPAESRDAIYVAVSTDTGSFQYPSTTAETYDMGADLIRRGLNVGQINSDIYDSHPYRRVGLMRALLNTLEVSESGAVASWEMRDQTRIDLQLRPEDSEGLIDIIRAIRGVLLAVFFEELPDGKIRISMRSKDQRLDVCKIATEFGGGGHTLAAGIRMAGPLEEAKQLVLAAIHRRIAEAGI

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 2162886012 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v1 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005272 Switchgrass rhizosphere microbial communities from Buena Vista Grasslands Wildlife Area, Michigan, USA - BV2.1 v1 Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
44 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
45 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
46 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
69 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
72 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
73 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
74 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
77 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
82 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
83 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
84 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
85 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
90 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
91 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
92 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
93 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
94 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
95 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
96 3300042144 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624F_E14_070516_89 Metagenome Rhizosphere
97 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
98 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
102 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
103 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
104 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
106 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
107 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
108 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.45
Nodule 0
Rhizoplane 0
Rhizosphere 85.28
Stem 0
Stem Tuber 0
Unclassified 20.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10171903 3300003320 Bacteria 1752
2 MBSR1b_contig_1100004 2162886012 Bacteria 2175
3 rootH1_10059745 3300003316 Bacteria 4697
4 rootL2_10056722 3300003322 Bacteria 2826
5 rootH1_10000971 3300003323 Bacteria 3376
6 rootH1_10022887 3300003323 Bacteria 5833
7 Ga0065703_1020616 3300005272 Unclassified 1654
8 Ga0065715_10112324 3300005293 Bacteria 2535
9 Ga0070658_10018265 3300005327 Bacteria 5613
10 Ga0068868_100231186 3300005338 Bacteria 1551
11 Ga0070661_100010016 3300005344 Bacteria 6579
12 Ga0070669_100071320 3300005353 Bacteria 2570
13 Ga0070675_100336634 3300005354 Bacteria 1336
14 Ga0070671_100122325 3300005355 Unclassified 2190
15 Ga0070709_10174761 3300005434 Unclassified 1504
16 Ga0070714_100149997 3300005435 Bacteria 2100
17 Ga0070713_100072829 3300005436 Bacteria 2907
18 Ga0070708_100022810 3300005445 Bacteria 5314
19 Ga0070708_100077544 3300005445 Bacteria 3003
20 Ga0068867_100000227 3300005459 Bacteria 36839
21 Ga0070706_100052964 3300005467 Bacteria 3745
22 Ga0070706_100089131 3300005467 Unclassified 2860
23 Ga0070706_100278476 3300005467 Unclassified 1561
24 Ga0070707_100056161 3300005468 Bacteria 3776
25 Ga0070707_100079290 3300005468 Unclassified 3169
26 Ga0070707_100104208 3300005468 Unclassified 2749
27 Ga0070698_100001834 3300005471 Bacteria 23658
28 Ga0070698_100016684 3300005471 Bacteria 7748
29 Ga0070699_100054680 3300005518 Bacteria 3456
30 Ga0070699_100124587 3300005518 Bacteria 2268
31 Ga0070697_100000877 3300005536 Bacteria 22621
32 Ga0070697_100002803 3300005536 Bacteria 13427
33 Ga0070697_100017584 3300005536 Bacteria 5628
34 Ga0068853_100000002 3300005539 Bacteria 485323
35 Ga0068853_100054214 3300005539 Unclassified 3455
36 Ga0068855_100000826 3300005563 Bacteria 38309
37 Ga0068855_100361620 3300005563 Bacteria 1597
38 Ga0070664_100000038 3300005564 Bacteria 80276
39 Ga0068863_100212252 3300005841 Unclassified 1864
40 Ga0068858_100202925 3300005842 Unclassified 1875
41 Ga0068858_100344832 3300005842 Bacteria 1426
42 Ga0068860_100000683 3300005843 Bacteria 39240
43 Ga0081539_10008307 3300005985 Bacteria 9086
44 Ga0070717_10004551 3300006028 Bacteria 10032
45 Ga0070717_10013955 3300006028 Bacteria 6170
46 Ga0070717_10155916 3300006028 Bacteria 1978
47 Ga0097621_100239372 3300006237 Unclassified 1586
48 Ga0075436_100049398 3300006914 Unclassified 2903
49 Ga0075436_100049637 3300006914 Bacteria 2896
50 Ga0105240_10000018 3300009093 Bacteria 434461
51 Ga0105240_10331728 3300009093 Unclassified 1731
52 Ga0105243_10000040 3300009148 Bacteria 160788
53 Ga0105242_10040313 3300009176 Unclassified 3763
54 Ga0105237_10005459 3300009545 Bacteria 14337
55 Ga0157373_10040188 3300013100 Bacteria 3348
56 Ga0157370_10000352 3300013104 Bacteria 58319
57 Ga0157374_10000060 3300013296 Bacteria 115293
58 Ga0157378_10229511 3300013297 Unclassified 1768
59 Ga0157376_10000236 3300014969 Bacteria 38605
60 Ga0157376_10005341 3300014969 Bacteria 8970
61 Ga0213872_10026300 3300021361 Bacteria 2673
62 Ga0213872_10047829 3300021361 Unclassified 1944
63 Ga0213872_10075094 3300021361 Bacteria 1521
64 Ga0213876_10004107 3300021384 Bacteria 8177
65 Ga0213876_10032304 3300021384 Bacteria 2761
66 Ga0213871_10000624 3300021441 Bacteria 5045
67 Ga0209050_1000144 3300025298 Bacteria 168793
68 Ga0207699_10157939 3300025906 Unclassified 1507
69 Ga0207705_10001663 3300025909 Bacteria 17676
70 Ga0207684_10059548 3300025910 Bacteria 3243
71 Ga0207695_10000141 3300025913 Bacteria 215831
72 Ga0207671_10004453 3300025914 Bacteria 13389
73 Ga0207646_10000734 3300025922 Bacteria 42601
74 Ga0207646_10007409 3300025922 Bacteria 11154
75 Ga0207646_10074368 3300025922 Bacteria 3035
76 Ga0207681_10066308 3300025923 Bacteria 2499
77 Ga0207650_10021941 3300025925 Unclassified 4518
78 Ga0207700_10016320 3300025928 Bacteria 4931
79 Ga0207644_10087965 3300025931 Unclassified 2310
80 Ga0207709_10000075 3300025935 Bacteria 174404
81 Ga0207667_10005230 3300025949 Bacteria 15829
82 Ga0207677_10207777 3300026023 Bacteria 1561
83 Ga0207703_10043354 3300026035 Unclassified 3611
84 Ga0207703_10461563 3300026035 Bacteria 1188
85 Ga0207639_10000009 3300026041 Bacteria 432727
86 Ga0207641_10183436 3300026088 Unclassified 1918
87 Ga0207648_10000090 3300026089 Bacteria 85618
88 Ga0207674_10394278 3300026116 Unclassified 1338
89 Ga0268265_10087787 3300028380 Bacteria 2476
90 Ga0268264_10003829 3300028381 Bacteria 12902
91 Ga0265325_10007196 3300031241 Bacteria 6692
92 Ga0265331_10004415 3300031250 Bacteria 8794
93 Ga0265327_10001045 3300031251 Bacteria 38741
94 Ga0265327_10027958 3300031251 Bacteria 3236
95 Ga0307408_100000036 3300031548 Bacteria 197635
96 Ga0307408_100011559 3300031548 Bacteria 5834
97 Ga0307408_100325464 3300031548 Bacteria 1296
98 Ga0316575_10019822 3300031665 Unclassified 2575
99 Ga0316576_10023531 3300031727 Bacteria 4293
100 Ga0316578_10006194 3300031728 Bacteria 5880
101 Ga0316577_10001366 3300031733 Bacteria 11491
102 Ga0316577_10148309 3300031733 Unclassified 1322
103 Ga0307406_10000226 3300031901 Bacteria 34345
104 Ga0307407_10000068 3300031903 Bacteria 40539
105 Ga0307407_10015896 3300031903 Bacteria 3734
106 Ga0307412_10000052 3300031911 Bacteria 150085
107 Ga0307409_100001909 3300031995 Bacteria 10629
108 Ga0307416_100006302 3300032002 Bacteria 7414
109 Ga0307414_10000013 3300032004 Bacteria 310222
110 Ga0307414_10109132 3300032004 Bacteria 2101
111 Ga0307414_10256721 3300032004 Unclassified 1456
112 Ga0316574_0001995 3300035398 Bacteria 10039
113 Ga0373947_0212393 3300035725 Bacteria 1269
114 Ga0316582_0000783 3300036647 Bacteria 12827
115 Ga0316584_0000271 3300036712 Bacteria 26258
116 Ga0316584_0016046 3300036712 Bacteria 5365
117 Ga0316584_0195111 3300036712 Bacteria 1496
118 Ga0436364_0084654 3300037853 Bacteria 3945
119 Ga0436364_0652696 3300037853 Bacteria 5510
120 Ga0395901_0111872 3300038443 Bacteria 2868
121 Ga0400483_014821 3300039062 Bacteria 37522
122 Ga0400483_217429 3300039062 Bacteria 28854
123 Ga0436365_0042250 3300039437 Bacteria 60076
124 Ga0436365_0557686 3300039437 Bacteria 5543
125 Ga0436365_0864940 3300039437 Bacteria 14267
126 Ga0436365_1150834 3300039437 Bacteria 43496
127 Ga0436365_1654920 3300039437 Bacteria 4035
128 Ga0436360_0073007 3300039438 Unclassified 1555
129 Ga0436360_0127682 3300039438 Bacteria 3268
130 Ga0436360_0134735 3300039438 Bacteria 7059
131 Ga0436360_0369325 3300039438 Unclassified 2838
132 Ga0436360_0386171 3300039438 Bacteria 2718
133 Ga0436361_0056732 3300039447 Bacteria 3371
134 Ga0436361_0173956 3300039447 Unclassified 1596
135 Ga0436361_0299155 3300039447 Unclassified 1064
136 Ga0436361_0538102 3300039447 Bacteria 6166
137 Ga0436361_0812530 3300039447 Unclassified 1860
138 Ga0436361_0891629 3300039447 Bacteria 2863
139 Ga0436361_0893445 3300039447 Unclassified 1832
140 Ga0436361_0900742 3300039447 Bacteria 1524
141 Ga0436361_1105818 3300039447 Bacteria 1223
142 Ga0436363_1247318 3300039450 Bacteria 13861
143 Ga0436363_1580914 3300039450 Bacteria 1989
144 Ga0436362_0740283 3300039453 Unclassified 1996
145 Ga0436362_0927392 3300039453 Unclassified 1670
146 Ga0450888_007983 3300042126 Bacteria 1183
147 Ga0450890_000010 3300042127 Bacteria 61254
148 Ga0450892_000378 3300042130 Bacteria 5292
149 Ga0450889_003602 3300042144 Bacteria 1530
150 Ga0450893_0000012 3300042532 Bacteria 17927
151 Ga0450893_0002059 3300042532 Bacteria 3131
152 Ga0453683_0010662 3300044673 Bacteria 6086
153 Ga0453684_0000074 3300044712 Bacteria 438364
154 Ga0451576_0000263 3300045051 Bacteria 128339
155 Ga0495643_0000474 3300046522 Bacteria 51197
156 Ga0496121_0035641 3300048924 Bacteria 4454
157 Ga0496123_0146467 3300048926 Bacteria 1282
158 Ga0501032_0039465 3300049569 Bacteria 3211
159 Ga0501080_0011129 3300049742 Bacteria 8236
160 nmdc:mga08x19_23065_c1 3300050514 Bacteria 3859
161 Ga0500559_0001097 3300053136 Bacteria 16401
162 Ga0500616_0002347 3300053153 Bacteria 15920
163 Ga0500616_0069462 3300053153 Bacteria 1801
164 rootH2_10171903
165 MBSR1b_contig_1100004
166 rootH1_10059745
167 rootL2_10056722
168 rootH1_10000971
169 rootH1_10022887
170 Ga0065703_1020616
171 Ga0065715_10112324
172 Ga0070658_10018265
173 Ga0068868_100231186
174 Ga0070661_100010016
175 Ga0070669_100071320
176 Ga0070675_100336634
177 Ga0070671_100122325
178 Ga0070709_10174761
179 Ga0070714_100149997
180 Ga0070713_100072829
181 Ga0070708_100022810
182 Ga0070708_100077544
183 Ga0068867_100000227
184 Ga0070706_100052964
185 Ga0070706_100089131
186 Ga0070706_100278476
187 Ga0070707_100056161
188 Ga0070707_100079290
189 Ga0070707_100104208
190 Ga0070698_100001834
191 Ga0070698_100016684
192 Ga0070699_100054680
193 Ga0070699_100124587
194 Ga0070697_100000877
195 Ga0070697_100002803
196 Ga0070697_100017584
197 Ga0068853_100000002
198 Ga0068853_100054214
199 Ga0068855_100000826
200 Ga0068855_100361620
201 Ga0070664_100000038
202 Ga0068863_100212252
203 Ga0068858_100202925
204 Ga0068858_100344832
205 Ga0068860_100000683
206 Ga0081539_10008307
207 Ga0070717_10004551
208 Ga0070717_10013955
209 Ga0070717_10155916
210 Ga0097621_100239372
211 Ga0075436_100049398
212 Ga0075436_100049637
213 Ga0105240_10000018
214 Ga0105240_10331728
215 Ga0105243_10000040
216 Ga0105242_10040313
217 Ga0105237_10005459
218 Ga0157373_10040188
219 Ga0157370_10000352
220 Ga0157374_10000060
221 Ga0157378_10229511
222 Ga0157376_10000236
223 Ga0157376_10005341
224 Ga0213872_10026300
225 Ga0213872_10047829
226 Ga0213872_10075094
227 Ga0213876_10004107
228 Ga0213876_10032304
229 Ga0213871_10000624
230 Ga0209050_1000144
231 Ga0207699_10157939
232 Ga0207705_10001663
233 Ga0207684_10059548
234 Ga0207695_10000141
235 Ga0207671_10004453
236 Ga0207646_10000734
237 Ga0207646_10007409
238 Ga0207646_10074368
239 Ga0207681_10066308
240 Ga0207650_10021941
241 Ga0207700_10016320
242 Ga0207644_10087965
243 Ga0207709_10000075
244 Ga0207667_10005230
245 Ga0207677_10207777
246 Ga0207703_10043354
247 Ga0207703_10461563
248 Ga0207639_10000009
249 Ga0207641_10183436
250 Ga0207648_10000090
251 Ga0207674_10394278
252 Ga0268265_10087787
253 Ga0268264_10003829
254 Ga0265325_10007196
255 Ga0265331_10004415
256 Ga0265327_10001045
257 Ga0265327_10027958
258 Ga0307408_100000036
259 Ga0307408_100011559
260 Ga0307408_100325464
261 Ga0316575_10019822
262 Ga0316576_10023531
263 Ga0316578_10006194
264 Ga0316577_10001366
265 Ga0316577_10148309
266 Ga0307406_10000226
267 Ga0307407_10000068
268 Ga0307407_10015896
269 Ga0307412_10000052
270 Ga0307409_100001909
271 Ga0307416_100006302
272 Ga0307414_10000013
273 Ga0307414_10109132
274 Ga0307414_10256721
275 Ga0316574_0001995
276 Ga0373947_0212393
277 Ga0316582_0000783
278 Ga0316584_0000271
279 Ga0316584_0016046
280 Ga0316584_0195111
281 Ga0436364_0084654
282 Ga0436364_0652696
283 Ga0395901_0111872
284 Ga0400483_014821
285 Ga0400483_217429
286 Ga0436365_0042250
287 Ga0436365_0557686
288 Ga0436365_0864940
289 Ga0436365_1150834
290 Ga0436365_1654920
291 Ga0436360_0073007
292 Ga0436360_0127682
293 Ga0436360_0134735
294 Ga0436360_0369325
295 Ga0436360_0386171
296 Ga0436361_0056732
297 Ga0436361_0173956
298 Ga0436361_0299155
299 Ga0436361_0538102
300 Ga0436361_0812530
301 Ga0436361_0891629
302 Ga0436361_0893445
303 Ga0436361_0900742
304 Ga0436361_1105818
305 Ga0436363_1247318
306 Ga0436363_1580914
307 Ga0436362_0740283
308 Ga0436362_0927392
309 Ga0450888_007983
310 Ga0450890_000010
311 Ga0450892_000378
312 Ga0450889_003602
313 Ga0450893_0000012
314 Ga0450893_0002059
315 Ga0453683_0010662
316 Ga0453684_0000074
317 Ga0451576_0000263
318 Ga0495643_0000474
319 Ga0496121_0035641
320 Ga0496123_0146467
321 Ga0501032_0039465
322 Ga0501080_0011129
323 nmdc:mga08x19_23065_c1
324 Ga0500559_0001097
325 Ga0500616_0002347
326 Ga0500616_0069462

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02272

DHHA1

DHHA1 domain

277

363

0.83

PF01368

DHH

DHH family

62

204

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
5o25-assembly1.cif.gz_A structure of wildtype t.maritima pde (tm1595) in ligand-free state 0.923 4 325
5o25-assembly1.cif.gz_A structure of wildtype t.maritima pde (tm1595) in ligand-free state 0.9202 4 325
5o4z-assembly1.cif.gz_A structure of the inactive t.maritima pde (tm1595) d80n d154n mutant with substrate 5'-papa 0.8976 4 324
5jju-assembly1.cif.gz_B crystal structure of rv2837c complexed with 5'-papa and 5'-amp 0.8876 1 326
5jju-assembly1.cif.gz_B crystal structure of rv2837c complexed with 5'-papa and 5'-amp 0.885 1 326
ID Description Score Start End Superfamily
4ls9B01 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core);inorganic pyrophosphatase (n-terminal core) 0.9228 1 195 3.90.1640.10
af_Q2FXM3_201_313_3.10.310.30 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1; 0.9138 208 321 3.10.310.30
4ls9B01 Alpha Beta;Alpha-Beta Complex;inorganic pyrophosphatase (n-terminal core);inorganic pyrophosphatase (n-terminal core) 0.9137 1 195 3.90.1640.10
4py9A02 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1; 0.9042 201 324 3.10.310.30
5ippA02 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1; 0.8799 208 323 3.10.310.30
ID Description Score Start End GO Terms
AF-A0A2V5QKR9-F1-model_v4 Bifunctional oligoribonuclease/PAP phosphatase NrnA 0.988 243 324 GO:0003676
AF-A0A2V5M4R8-F1-model_v4 DDH domain-containing protein 0.9777 2 134
AF-A0A4V1S6H3-F1-model_v4 DDH domain-containing protein 0.9714 1 209
AF-A0A7X9GBH0-F1-model_v4 Bifunctional oligoribonuclease/PAP phosphatase NrnA 0.9668 200 321 GO:0003676
AF-A0A2V5M4R8-F1-model_v4 DDH domain-containing protein 0.9634 2 134

Map