F246019
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 165 | 133 | 142 | 592 |
Family's Representative Sequence
| Representative Sequence | 3300009098|Ga0105245_10032137|Ga0105245_100321374 |
| Length | 626 |
| Sequence | VSTPADIKGGNTDPARKLSPCDHHSHRAGRDRGRHARRRPPVDAARRVPGAGVAIRHEPWIFTLSTLGSLLFGALTVADAWVLGWATDHAVLPAFRTGETSVGIAVAVIALFLGVAILRAVGIVARRLGAGVMQYRMQALYRREVTRQYLRLPMEWHQRHPTGQLLSNANSDVEAAWSPIAPLPMAVGTIAMMVIAIGQMLYTDVVMAVVGLLVFPLVIVANITYQRLSSPLITRIQALRAEISEIAHESFDGAMVVKTMGREAEETERFRVKAHQLRDMGIRAGRIRAAFDPLLEGLPNIGILFVLGVGVWRVSTQTADAGDVVTVAYLLMIVAFPIRSIGWLVGEFPRSVVGYQRVHRVLDERSGTSYGVASLPDGSTHPAGARLEVDHLGYSYGPGPRLLEDLDLVVEPGRTVALVGATASGKSTLTTLLMRLVDPDAGAIRVDGIDLRDLERGALAREAALVPQSAFLFDDTVRGNVTLGDDVPDEDIWAALRTAQADGFVAALPRGLDSRLGERGTTLSGGQRQRLSLARALVRHPRLLVLDDATSAVDPEVEQRILAAMRQHTGSTTMVLVASRKATIALADEVLFLADGRIADRGTHDELLGRNEAYARLVNAYEGEDA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221561 | Nocardioides sp. Root151 | Isolate | Unclassified |
| 2 | 2643221576 | Nocardioides sp. Root614 | Isolate | Unclassified |
| 3 | 2643221590 | Nocardioides sp. Root682 | Isolate | Unclassified |
| 4 | 2643221604 | Nocardioides sp. Root190 | Isolate | Unclassified |
| 5 | 2643221615 | Nocardioides sp. Root224 | Isolate | Unclassified |
| 6 | 2643221617 | Nocardioides sp. Root79 | Isolate | Unclassified |
| 7 | 2643221620 | Nocardioides sp. Root240 | Isolate | Unclassified |
| 8 | 2643221641 | Nocardioides sp. Root122 | Isolate | Unclassified |
| 9 | 2643221657 | Nocardioides sp. Root1257 | Isolate | Unclassified |
| 10 | 2643221696 | Nocardioides sp. Root140 | Isolate | Unclassified |
| 11 | 2738541305 | Nocardioides sp. CF167 | Isolate | Unclassified |
| 12 | 2739367898 | Nocardioides sp. CF479 | Isolate | Unclassified |
| 13 | 2773857762 | Nocardioides sp. SAI-095 | Isolate | Unclassified |
| 14 | 2808606439 | Nocardioides sp. SLBN-172 | Isolate | Unclassified |
| 15 | 2811994874 | Nocardioides sp. SLBN-35 | Isolate | Unclassified |
| 16 | 2811994878 | Nocardioides sp. SLBN-169 | Isolate | Unclassified |
| 17 | 2855386786 | Nocardioides ferulae EGI 63112 | Isolate | Unclassified |
| 18 | 2857481737 | Nocardioides sp. R-74106 | Isolate | Unclassified |
| 19 | 2891968417 | Nocardioides luteus SAI-037 | Isolate | Unclassified |
| 20 | 2984576629 | Nocardioides zeae SORGH_AS913 | Isolate | Aerial Root |
| 21 | 2990256926 | Nocardioides zeae SORGH_AS885 | Isolate | Aerial Root |
| 22 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 23 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 28 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 29 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 30 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 32 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 33 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 34 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 35 | 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Metagenome | Rhizosphere |
| 36 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 37 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 38 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 39 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 40 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 41 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 42 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 43 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 44 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 45 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 46 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 74 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 76 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 77 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 78 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 79 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 80 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 81 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 82 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 83 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 84 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 85 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 86 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 87 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 88 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 89 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 90 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 91 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 92 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 93 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 94 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 95 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 96 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 97 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 98 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 99 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 100 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 101 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 102 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 103 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 104 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 105 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 106 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 107 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 108 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 114 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 115 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 116 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 117 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 118 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 119 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 125 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 126 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 127 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 128 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 129 | 3300059424 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 130 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 132 | 8054609563 | Nocardioides astragali CGMCC 4.7327 | Isolate | Nodule |
| 133 | 8056060235 | Nocardiopsis endophytica RSe5-2 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 86.06 |
| Metatranscriptomes | 0 |
| Isolates | 13.94 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.21 |
| Bulb | 0 |
| Endosphere | 18.18 |
| Nodule | 0.61 |
| Rhizoplane | 4.24 |
| Rhizosphere | 62.42 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 13.33 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070683_100019086 | 3300005329 | Bacteria | 6084 |
| 2 | Ga0070692_10009253 | 3300005345 | Bacteria | 4435 |
| 3 | Ga0070674_100003615 | 3300005356 | Bacteria | 8699 |
| 4 | Ga0070700_100006515 | 3300005441 | Bacteria | 6243 |
| 5 | Ga0070663_100071152 | 3300005455 | Bacteria | 2531 |
| 6 | Ga0068867_100004399 | 3300005459 | Bacteria | 9913 |
| 7 | Ga0070707_100025100 | 3300005468 | Bacteria | 5653 |
| 8 | Ga0070698_100011699 | 3300005471 | Bacteria | 9308 |
| 9 | Ga0070672_100002885 | 3300005543 | Bacteria | 11054 |
| 10 | Ga0070672_100086944 | 3300005543 | Bacteria | 2515 |
| 11 | Ga0068855_100108659 | 3300005563 | Bacteria | 3185 |
| 12 | Ga0068861_100046824 | 3300005719 | Bacteria | 3262 |
| 13 | Ga0068860_100005640 | 3300005843 | Bacteria | 12647 |
| 14 | Ga0081455_10000128 | 3300005937 | Bacteria | 88444 |
| 15 | Ga0081455_10009693 | 3300005937 | Bacteria | 9879 |
| 16 | Ga0081538_10000005 | 3300005981 | Bacteria | 187304 |
| 17 | Ga0081539_10011835 | 3300005985 | Bacteria | 6824 |
| 18 | Ga0075365_10000640 | 3300006038 | Bacteria | 13877 |
| 19 | Ga0075365_10013348 | 3300006038 | Bacteria | 4909 |
| 20 | Ga0075365_10020448 | 3300006038 | Bacteria | 4105 |
| 21 | Ga0075365_10054529 | 3300006038 | Bacteria | 2651 |
| 22 | Ga0075365_10100732 | 3300006038 | Bacteria | 1977 |
| 23 | Ga0075368_10002147 | 3300006042 | Bacteria | 6374 |
| 24 | Ga0075363_100003618 | 3300006048 | Bacteria | 6621 |
| 25 | Ga0075363_100006087 | 3300006048 | Bacteria | 5444 |
| 26 | Ga0075363_100016533 | 3300006048 | Bacteria | 3644 |
| 27 | Ga0075364_10023805 | 3300006051 | Bacteria | 3880 |
| 28 | Ga0075364_10039810 | 3300006051 | Bacteria | 3048 |
| 29 | Ga0075367_10016717 | 3300006178 | Bacteria | 4010 |
| 30 | Ga0075367_10040167 | 3300006178 | Bacteria | 2731 |
| 31 | Ga0075367_10071328 | 3300006178 | Bacteria | 2089 |
| 32 | Ga0075370_10006358 | 3300006353 | Bacteria | 5933 |
| 33 | Ga0075370_10006422 | 3300006353 | Bacteria | 5910 |
| 34 | Ga0075370_10033336 | 3300006353 | Bacteria | 2883 |
| 35 | Ga0075428_100002980 | 3300006844 | Bacteria | 18447 |
| 36 | Ga0075431_100000088 | 3300006847 | Bacteria | 56098 |
| 37 | Ga0075431_100010121 | 3300006847 | Bacteria | 9477 |
| 38 | Ga0075429_100002486 | 3300006880 | Bacteria | 15513 |
| 39 | Ga0111539_10011052 | 3300009094 | Bacteria | 11357 |
| 40 | Ga0105245_10032137 | 3300009098 | Bacteria | 4646 |
| 41 | Ga0105245_10127483 | 3300009098 | Bacteria | 2384 |
| 42 | Ga0114129_10051139 | 3300009147 | Bacteria | 5802 |
| 43 | Ga0105243_10003090 | 3300009148 | Bacteria | 13702 |
| 44 | Ga0105248_10008824 | 3300009177 | Bacteria | 11074 |
| 45 | Ga0105238_10088955 | 3300009551 | Bacteria | 3075 |
| 46 | Ga0105239_10242837 | 3300010375 | Bacteria | 2021 |
| 47 | Ga0105246_10126605 | 3300011119 | Bacteria | 1901 |
| 48 | Ga0157371_10086027 | 3300013102 | Bacteria | 2227 |
| 49 | Ga0157370_10004279 | 3300013104 | Bacteria | 16443 |
| 50 | Ga0157369_10007548 | 3300013105 | Bacteria | 12514 |
| 51 | Ga0157375_10028362 | 3300013308 | Bacteria | 5246 |
| 52 | Ga0163161_10018407 | 3300017792 | Bacteria | 4897 |
| 53 | Ga0207647_10003080 | 3300025904 | Bacteria | 12532 |
| 54 | Ga0207643_10001665 | 3300025908 | Bacteria | 12482 |
| 55 | Ga0207657_10004836 | 3300025919 | Bacteria | 14184 |
| 56 | Ga0207694_10103052 | 3300025924 | Bacteria | 2263 |
| 57 | Ga0207687_10023104 | 3300025927 | Bacteria | 4142 |
| 58 | Ga0207709_10045380 | 3300025935 | Bacteria | 2661 |
| 59 | Ga0207669_10054094 | 3300025937 | Bacteria | 2423 |
| 60 | Ga0207691_10003765 | 3300025940 | Bacteria | 14728 |
| 61 | Ga0207691_10046445 | 3300025940 | Bacteria | 3990 |
| 62 | Ga0207667_10028092 | 3300025949 | Bacteria | 6112 |
| 63 | Ga0207677_10073070 | 3300026023 | Bacteria | 2427 |
| 64 | Ga0207678_10098770 | 3300026067 | Bacteria | 2494 |
| 65 | Ga0207708_10000509 | 3300026075 | Bacteria | 29969 |
| 66 | Ga0207648_10002189 | 3300026089 | Bacteria | 21212 |
| 67 | Ga0207698_10105266 | 3300026142 | Bacteria | 2350 |
| 68 | Ga0207428_10043624 | 3300027907 | Bacteria | 3621 |
| 69 | Ga0268264_10000775 | 3300028381 | Bacteria | 35258 |
| 70 | Ga0307410_10097676 | 3300031852 | Bacteria | 2099 |
| 71 | Ga0307416_100016340 | 3300032002 | Bacteria | 5155 |
| 72 | Ga0307415_100013444 | 3300032126 | Bacteria | 4779 |
| 73 | Ga0307415_100055558 | 3300032126 | Bacteria | 2710 |
| 74 | Ga0436364_0974452 | 3300037853 | Bacteria | 2834 |
| 75 | Ga0395901_0083093 | 3300038443 | Bacteria | 3347 |
| 76 | Ga0466972_0001402 | 3300044658 | Bacteria | 11685 |
| 77 | Ga0466965_0017437 | 3300044683 | Bacteria | 3433 |
| 78 | Ga0466965_0061271 | 3300044683 | Bacteria | 1881 |
| 79 | Ga0466961_0045038 | 3300044693 | Bacteria | 2823 |
| 80 | Ga0466963_0059880 | 3300044694 | Bacteria | 2542 |
| 81 | Ga0466971_0012369 | 3300044719 | Bacteria | 3739 |
| 82 | Ga0466971_0021744 | 3300044719 | Bacteria | 2854 |
| 83 | Ga0466970_0003597 | 3300044765 | Bacteria | 7558 |
| 84 | Ga0466970_0014173 | 3300044765 | Bacteria | 4088 |
| 85 | Ga0466957_0042244 | 3300044842 | Bacteria | 2758 |
| 86 | Ga0466960_0000248 | 3300044901 | Bacteria | 18604 |
| 87 | Ga0466958_0026244 | 3300045836 | Bacteria | 3442 |
| 88 | Ga0496101_0047759 | 3300048904 | Bacteria | 3074 |
| 89 | Ga0496102_0032593 | 3300048905 | Bacteria | 4681 |
| 90 | Ga0496107_0041870 | 3300048910 | Bacteria | 3290 |
| 91 | Ga0496108_0136075 | 3300048911 | Bacteria | 2114 |
| 92 | Ga0496110_0029824 | 3300048913 | Bacteria | 4699 |
| 93 | Ga0496114_0042853 | 3300048917 | Bacteria | 3752 |
| 94 | Ga0496115_0043254 | 3300048918 | Bacteria | 3592 |
| 95 | Ga0496124_0020222 | 3300048927 | Bacteria | 6161 |
| 96 | Ga0501031_0001468 | 3300049568 | Bacteria | 14634 |
| 97 | Ga0501036_0008607 | 3300049572 | Bacteria | 8371 |
| 98 | Ga0501036_0043360 | 3300049572 | Bacteria | 3809 |
| 99 | Ga0501037_0025924 | 3300049573 | Bacteria | 4330 |
| 100 | Ga0501039_0018086 | 3300049575 | Bacteria | 5409 |
| 101 | Ga0501040_0042791 | 3300049576 | Bacteria | 3086 |
| 102 | Ga0501041_0077714 | 3300049577 | Bacteria | 2042 |
| 103 | Ga0501042_0017393 | 3300049578 | Bacteria | 4958 |
| 104 | Ga0501042_0028049 | 3300049578 | Bacteria | 3962 |
| 105 | Ga0501042_0068969 | 3300049578 | Bacteria | 2529 |
| 106 | Ga0501048_0067073 | 3300049582 | Bacteria | 2537 |
| 107 | Ga0501067_0050978 | 3300049583 | Bacteria | 2294 |
| 108 | Ga0501068_0043738 | 3300049584 | Bacteria | 2695 |
| 109 | Ga0501070_0001705 | 3300049586 | Bacteria | 19486 |
| 110 | Ga0501070_0029552 | 3300049586 | Bacteria | 4594 |
| 111 | Ga0501074_0041394 | 3300049590 | Bacteria | 3336 |
| 112 | Ga0501079_0119824 | 3300049741 | Bacteria | 2046 |
| 113 | Ga0501080_0034891 | 3300049742 | Bacteria | 4698 |
| 114 | Ga0501080_0104342 | 3300049742 | Bacteria | 2629 |
| 115 | Ga0501035_0010336 | 3300049822 | Bacteria | 8655 |
| 116 | Ga0501044_0001740 | 3300049823 | Bacteria | 25430 |
| 117 | Ga0501045_0019698 | 3300049824 | Bacteria | 4814 |
| 118 | Ga0501045_0021299 | 3300049824 | Bacteria | 4637 |
| 119 | nmdc:mga03n38_4172_c1 | 3300050490 | Bacteria | 4752 |
| 120 | nmdc:mga03n38_6857_c1 | 3300050490 | Bacteria | 3992 |
| 121 | nmdc:mga00v17_19224_c1 | 3300050491 | Bacteria | 3897 |
| 122 | nmdc:mga00v17_24973_c1 | 3300050491 | Bacteria | 3468 |
| 123 | nmdc:mga00v17_6228_c1 | 3300050491 | Bacteria | 6327 |
| 124 | nmdc:mga0yw44_10520_c1 | 3300050492 | Bacteria | 4731 |
| 125 | nmdc:mga0yw44_49405_c1 | 3300050492 | Bacteria | 2539 |
| 126 | nmdc:mga06z11_21294_c1 | 3300050494 | Bacteria | 3011 |
| 127 | nmdc:mga07m45_6839_c1 | 3300050496 | Bacteria | 5799 |
| 128 | nmdc:mga05p37_688_c1 | 3300050507 | Bacteria | 37481 |
| 129 | nmdc:mga09592_457_c1 | 3300050508 | Bacteria | 30409 |
| 130 | nmdc:mga06r32_13420_c1 | 3300050510 | Bacteria | 7418 |
| 131 | nmdc:mga06r32_282_c1 | 3300050510 | Bacteria | 42388 |
| 132 | nmdc:mga08y16_11386_c1 | 3300050511 | Bacteria | 9348 |
| 133 | Ga0495601_0009096 | 3300053077 | Bacteria | 5865 |
| 134 | Ga0500644_0000009 | 3300053088 | Bacteria | 127269 |
| 135 | Ga0500641_0004591 | 3300053096 | Bacteria | 4880 |
| 136 | Ga0500556_0000534 | 3300053104 | Bacteria | 25901 |
| 137 | Ga0500593_000177 | 3300053117 | Bacteria | 25732 |
| 138 | Ga0501084_0043964 | 3300054114 | Bacteria | 3738 |
| 139 | Ga0590075_009605 | 3300059424 | Bacteria | 2321 |
| 140 | Ga0501082_0062564 | 3300060353 | Bacteria | 3204 |
| 141 | Ga0466962_0006047 | 3300061719 | Bacteria | 5823 |
| 142 | Ga0466962_0045209 | 3300061719 | Bacteria | 2105 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300044683 | Ga0466965_0061271 | Ga0466965_0061271_296_1864 | 488 |
| 2 | 3300049582 | Ga0501048_0067073 | Ga0501048_0067073_905_2527 | 512 |
| 3 | 3300053117 | Ga0500593_000177 | Ga0500593_000177_19582_21336 | 541 |
| 4 | 3300059424 | Ga0590075_009605 | Ga0590075_009605_264_2102 | 555 |
| 5 | 3300050491 | nmdc:mga00v17_6228_c1 | nmdc:mga00v17_6228_c1_10_1716 | 557 |
| 6 | 3300053096 | Ga0500641_0004591 | Ga0500641_0004591_206_2029 | 559 |
| 7 | 3300005937 | Ga0081455_10000128 | Ga0081455_1000012874 | 560 |
| 8 | 3300006844 | Ga0075428_100002980 | Ga0075428_1000029807 | 560 |
| 9 | 3300006847 | Ga0075431_100010121 | Ga0075431_1000101212 | 560 |
| 10 | 3300006880 | Ga0075429_100002486 | Ga0075429_10000248612 | 560 |
| 11 | 3300009094 | Ga0111539_10011052 | Ga0111539_100110523 | 560 |
| 12 | 3300009147 | Ga0114129_10051139 | Ga0114129_100511394 | 560 |
| 13 | 3300027907 | Ga0207428_10043624 | Ga0207428_100436243 | 560 |
| 14 | 3300050507 | nmdc:mga05p37_688_c1 | nmdc:mga05p37_688_c1_32331_34160 | 560 |
| 15 | 3300050508 | nmdc:mga09592_457_c1 | nmdc:mga09592_457_c1_939_2768 | 560 |
| 16 | 3300050510 | nmdc:mga06r32_282_c1 | nmdc:mga06r32_282_c1_11661_13490 | 560 |
| 17 | 3300050511 | nmdc:mga08y16_11386_c1 | nmdc:mga08y16_11386_c1_6116_7945 | 560 |
| 18 | 3300005468 | Ga0070707_100025100 | Ga0070707_1000251002 | 561 |
| 19 | 3300005471 | Ga0070698_100011699 | Ga0070698_1000116998 | 561 |
| 20 | 3300006038 | Ga0075365_10000640 | Ga0075365_1000064015 | 561 |
| 21 | 3300050492 | nmdc:mga0yw44_10520_c1 | nmdc:mga0yw44_10520_c1_1765_3597 | 561 |
| 22 | 3300005563 | Ga0068855_100108659 | Ga0068855_1001086592 | 562 |
| 23 | 3300013104 | Ga0157370_10004279 | Ga0157370_1000427915 | 562 |
| 24 | 3300013105 | Ga0157369_10007548 | Ga0157369_100075487 | 562 |
| 25 | 3300025949 | Ga0207667_10028092 | Ga0207667_100280926 | 562 |
| 26 | 3300044765 | Ga0466970_0014173 | Ga0466970_0014173_14_1753 | 563 |
| 27 | 3300025904 | Ga0207647_10003080 | Ga0207647_100030805 | 566 |
| 28 | 3300025919 | Ga0207657_10004836 | Ga0207657_1000483613 | 566 |
| 29 | 3300032002 | Ga0307416_100016340 | Ga0307416_1000163403 | 566 |
| 30 | 3300032126 | Ga0307415_100013444 | Ga0307415_1000134444 | 566 |
| 31 | 3300044693 | Ga0466961_0045038 | Ga0466961_0045038_615_2369 | 567 |
| 32 | 3300049576 | Ga0501040_0042791 | Ga0501040_0042791_334_2187 | 567 |
| 33 | 3300005937 | Ga0081455_10009693 | Ga0081455_100096937 | 568 |
| 34 | 3300053077 | Ga0495601_0009096 | Ga0495601_0009096_1927_3750 | 568 |
| 35 | 3300005981 | Ga0081538_10000005 | Ga0081538_10000005138 | 569 |
| 36 | 3300049586 | Ga0501070_0001705 | Ga0501070_0001705_2462_4354 | 569 |
| 37 | 3300049742 | Ga0501080_0034891 | Ga0501080_0034891_1249_3141 | 569 |
| 38 | 3300006353 | Ga0075370_10033336 | Ga0075370_100333362 | 570 |
| 39 | 3300044765 | Ga0466970_0003597 | Ga0466970_0003597_2283_4130 | 570 |
| 40 | 3300049575 | Ga0501039_0018086 | Ga0501039_0018086_1236_3032 | 570 |
| 41 | iso_pu_bacteria | 2811994874 | 2812332408 | 570 |
| 42 | 3300006847 | Ga0075431_100000088 | Ga0075431_10000008819 | 571 |
| 43 | 3300049578 | Ga0501042_0068969 | Ga0501042_0068969_208_2046 | 571 |
| 44 | 3300050510 | nmdc:mga06r32_13420_c1 | nmdc:mga06r32_13420_c1_1069_2883 | 571 |
| 45 | 3300038443 | Ga0395901_0083093 | Ga0395901_0083093_1488_3218 | 572 |
| 46 | 3300049586 | Ga0501070_0029552 | Ga0501070_0029552_426_2225 | 572 |
| 47 | 3300006038 | Ga0075365_10013348 | Ga0075365_100133482 | 573 |
| 48 | 3300006048 | Ga0075363_100016533 | Ga0075363_1000165332 | 573 |
| 49 | 3300006178 | Ga0075367_10071328 | Ga0075367_100713281 | 573 |
| 50 | 3300044694 | Ga0466963_0059880 | Ga0466963_0059880_256_2022 | 573 |
| 51 | 3300050491 | nmdc:mga00v17_19224_c1 | nmdc:mga00v17_19224_c1_1497_3353 | 573 |
| 52 | 3300005843 | Ga0068860_100005640 | Ga0068860_1000056409 | 574 |
| 53 | 3300005985 | Ga0081539_10011835 | Ga0081539_100118352 | 574 |
| 54 | 3300006038 | Ga0075365_10054529 | Ga0075365_100545292 | 574 |
| 55 | 3300006042 | Ga0075368_10002147 | Ga0075368_100021472 | 574 |
| 56 | 3300006048 | Ga0075363_100006087 | Ga0075363_1000060872 | 574 |
| 57 | 3300006178 | Ga0075367_10016717 | Ga0075367_100167173 | 574 |
| 58 | 3300028381 | Ga0268264_10000775 | Ga0268264_1000077514 | 574 |
| 59 | 3300031852 | Ga0307410_10097676 | Ga0307410_100976762 | 574 |
| 60 | 3300050490 | nmdc:mga03n38_4172_c1 | nmdc:mga03n38_4172_c1_994_2859 | 574 |
| 61 | 3300050491 | nmdc:mga00v17_24973_c1 | nmdc:mga00v17_24973_c1_1361_3202 | 574 |
| 62 | 3300044683 | Ga0466965_0017437 | Ga0466965_0017437_1234_3036 | 575 |
| 63 | 3300048927 | Ga0496124_0020222 | Ga0496124_0020222_806_2653 | 575 |
| 64 | 3300053104 | Ga0500556_0000534 | Ga0500556_0000534_23456_25270 | 575 |
| 65 | iso_pu_bacteria | 2643221561 | 2643825611 | 576 |
| 66 | iso_pu_bacteria | 2643221696 | 2644531608 | 576 |
| 67 | 3300049572 | Ga0501036_0043360 | Ga0501036_0043360_1844_3598 | 578 |
| 68 | 3300049573 | Ga0501037_0025924 | Ga0501037_0025924_478_2232 | 578 |
| 69 | 3300049578 | Ga0501042_0028049 | Ga0501042_0028049_1349_3103 | 578 |
| 70 | 3300049822 | Ga0501035_0010336 | Ga0501035_0010336_1860_3614 | 578 |
| 71 | 3300049823 | Ga0501044_0001740 | Ga0501044_0001740_17077_18831 | 578 |
| 72 | 3300032126 | Ga0307415_100055558 | Ga0307415_1000555582 | 579 |
| 73 | iso_pu_bacteria | 2738541305 | 2738869686 | 580 |
| 74 | 3300044658 | Ga0466972_0001402 | Ga0466972_0001402_2612_4393 | 581 |
| 75 | 3300044719 | Ga0466971_0021744 | Ga0466971_0021744_595_2376 | 581 |
| 76 | 3300045836 | Ga0466958_0026244 | Ga0466958_0026244_1375_3156 | 581 |
| 77 | 3300061719 | Ga0466962_0006047 | Ga0466962_0006047_1416_3197 | 581 |
| 78 | iso_pu_bacteria | 2855386786 | 2855387837 | 583 |
| 79 | iso_pu_bacteria | 2643221576 | 2643888961 | 584 |
| 80 | iso_pu_bacteria | 2643221590 | 2643958016 | 584 |
| 81 | 3300005455 | Ga0070663_100071152 | Ga0070663_1000711522 | 586 |
| 82 | 3300005543 | Ga0070672_100086944 | Ga0070672_1000869442 | 586 |
| 83 | 3300011119 | Ga0105246_10126605 | Ga0105246_101266051 | 586 |
| 84 | 3300013308 | Ga0157375_10028362 | Ga0157375_100283626 | 586 |
| 85 | 3300017792 | Ga0163161_10018407 | Ga0163161_100184075 | 586 |
| 86 | 3300025940 | Ga0207691_10046445 | Ga0207691_100464453 | 586 |
| 87 | 3300026067 | Ga0207678_10098770 | Ga0207678_100987702 | 586 |
| 88 | 3300006038 | Ga0075365_10020448 | Ga0075365_100204483 | 587 |
| 89 | 3300048904 | Ga0496101_0047759 | Ga0496101_0047759_396_2177 | 587 |
| 90 | 3300048905 | Ga0496102_0032593 | Ga0496102_0032593_2119_3900 | 587 |
| 91 | 3300048910 | Ga0496107_0041870 | Ga0496107_0041870_639_2420 | 587 |
| 92 | 3300048913 | Ga0496110_0029824 | Ga0496110_0029824_1061_2842 | 587 |
| 93 | 3300048917 | Ga0496114_0042853 | Ga0496114_0042853_373_2154 | 587 |
| 94 | 3300049583 | Ga0501067_0050978 | Ga0501067_0050978_118_1899 | 587 |
| 95 | iso_pu_bacteria | 2643221604 | 2644034506 | 587 |
| 96 | iso_pu_bacteria | 2643221615 | 2644089559 | 587 |
| 97 | iso_pu_bacteria | 2643221641 | 2644228910 | 587 |
| 98 | iso_pu_bacteria | 2643221657 | 2644319404 | 587 |
| 99 | iso_pu_bacteria | 2857481737 | 2857482638 | 587 |
| 100 | iso_pu_bacteria | 2984576629 | 2984579843 | 587 |
| 101 | iso_pu_bacteria | 2990256926 | 2990257449 | 587 |
| 102 | iso_pu_bacteria | 8054609563 | 8054612770 | 587 |
| 103 | 3300053088 | Ga0500644_0000009 | Ga0500644_0000009_16649_18430 | 588 |
| 104 | iso_pu_bacteria | 2643221617 | 2644098857 | 588 |
| 105 | iso_pu_bacteria | 2643221620 | 2644114738 | 588 |
| 106 | iso_pu_bacteria | 2739367898 | 2740167031 | 588 |
| 107 | iso_pu_bacteria | 2773857762 | 2774393358 | 588 |
| 108 | iso_pu_bacteria | 2808606439 | 2809195754 | 588 |
| 109 | iso_pu_bacteria | 2811994878 | 2812350651 | 588 |
| 110 | iso_pu_bacteria | 2891968417 | 2891971749 | 588 |
| 111 | 3300049584 | Ga0501068_0043738 | Ga0501068_0043738_475_2280 | 589 |
| 112 | 3300044901 | Ga0466960_0000248 | Ga0466960_0000248_11543_13345 | 590 |
| 113 | 3300049824 | Ga0501045_0019698 | Ga0501045_0019698_1507_3324 | 590 |
| 114 | 3300006178 | Ga0075367_10040167 | Ga0075367_100401673 | 592 |
| 115 | 3300044842 | Ga0466957_0042244 | Ga0466957_0042244_29_1891 | 592 |
| 116 | 3300049568 | Ga0501031_0001468 | Ga0501031_0001468_7272_9080 | 592 |
| 117 | 3300049572 | Ga0501036_0008607 | Ga0501036_0008607_4495_6303 | 592 |
| 118 | 3300049577 | Ga0501041_0077714 | Ga0501041_0077714_188_1996 | 592 |
| 119 | 3300049578 | Ga0501042_0017393 | Ga0501042_0017393_95_1903 | 592 |
| 120 | 3300049741 | Ga0501079_0119824 | Ga0501079_0119824_83_1891 | 592 |
| 121 | 3300049742 | Ga0501080_0104342 | Ga0501080_0104342_799_2607 | 592 |
| 122 | 3300049824 | Ga0501045_0021299 | Ga0501045_0021299_1471_3279 | 592 |
| 123 | 3300050492 | nmdc:mga0yw44_49405_c1 | nmdc:mga0yw44_49405_c1_683_2524 | 592 |
| 124 | 3300054114 | Ga0501084_0043964 | Ga0501084_0043964_1376_3184 | 592 |
| 125 | 3300060353 | Ga0501082_0062564 | Ga0501082_0062564_424_2232 | 592 |
| 126 | 3300006051 | Ga0075364_10039810 | Ga0075364_100398102 | 593 |
| 127 | 3300044719 | Ga0466971_0012369 | Ga0466971_0012369_460_2298 | 594 |
| 128 | 3300006038 | Ga0075365_10100732 | Ga0075365_101007322 | 595 |
| 129 | 3300009098 | Ga0105245_10127483 | Ga0105245_101274831 | 595 |
| 130 | 3300050494 | nmdc:mga06z11_21294_c1 | nmdc:mga06z11_21294_c1_638_2452 | 595 |
| 131 | 3300006048 | Ga0075363_100003618 | Ga0075363_1000036183 | 596 |
| 132 | 3300006051 | Ga0075364_10023805 | Ga0075364_100238054 | 596 |
| 133 | 3300006353 | Ga0075370_10006358 | Ga0075370_100063587 | 596 |
| 134 | 3300006353 | Ga0075370_10006422 | Ga0075370_100064224 | 596 |
| 135 | 3300010375 | Ga0105239_10242837 | Ga0105239_102428372 | 596 |
| 136 | 3300048918 | Ga0496115_0043254 | Ga0496115_0043254_153_1955 | 596 |
| 137 | 3300049590 | Ga0501074_0041394 | Ga0501074_0041394_807_2687 | 596 |
| 138 | 3300050490 | nmdc:mga03n38_6857_c1 | nmdc:mga03n38_6857_c1_1238_3082 | 596 |
| 139 | 3300050496 | nmdc:mga07m45_6839_c1 | nmdc:mga07m45_6839_c1_107_1942 | 597 |
| 140 | iso_pu_bacteria | 8056060235 | 8056061985 | 597 |
| 141 | 3300061719 | Ga0466962_0045209 | Ga0466962_0045209_179_1999 | 598 |
| 142 | 3300037853 | Ga0436364_0974452 | Ga0436364_0974452_636_2537 | 603 |
| 143 | 3300005329 | Ga0070683_100019086 | Ga0070683_1000190862 | 606 |
| 144 | 3300005345 | Ga0070692_10009253 | Ga0070692_100092534 | 606 |
| 145 | 3300005356 | Ga0070674_100003615 | Ga0070674_1000036152 | 606 |
| 146 | 3300005441 | Ga0070700_100006515 | Ga0070700_1000065152 | 606 |
| 147 | 3300005459 | Ga0068867_100004399 | Ga0068867_10000439911 | 606 |
| 148 | 3300005543 | Ga0070672_100002885 | Ga0070672_10000288511 | 606 |
| 149 | 3300005719 | Ga0068861_100046824 | Ga0068861_1000468242 | 606 |
| 150 | 3300009098 | Ga0105245_10032137 | Ga0105245_100321374 | 606 |
| 151 | 3300009148 | Ga0105243_10003090 | Ga0105243_100030905 | 606 |
| 152 | 3300009177 | Ga0105248_10008824 | Ga0105248_1000882411 | 606 |
| 153 | 3300009551 | Ga0105238_10088955 | Ga0105238_100889552 | 606 |
| 154 | 3300013102 | Ga0157371_10086027 | Ga0157371_100860271 | 606 |
| 155 | 3300025908 | Ga0207643_10001665 | Ga0207643_1000166510 | 606 |
| 156 | 3300025924 | Ga0207694_10103052 | Ga0207694_101030521 | 606 |
| 157 | 3300025927 | Ga0207687_10023104 | Ga0207687_100231043 | 606 |
| 158 | 3300025935 | Ga0207709_10045380 | Ga0207709_100453802 | 606 |
| 159 | 3300025937 | Ga0207669_10054094 | Ga0207669_100540941 | 606 |
| 160 | 3300025940 | Ga0207691_10003765 | Ga0207691_1000376512 | 606 |
| 161 | 3300026023 | Ga0207677_10073070 | Ga0207677_100730701 | 606 |
| 162 | 3300026075 | Ga0207708_10000509 | Ga0207708_1000050915 | 606 |
| 163 | 3300026089 | Ga0207648_10002189 | Ga0207648_100021898 | 606 |
| 164 | 3300026142 | Ga0207698_10105266 | Ga0207698_101052662 | 606 |
| 165 | 3300048911 | Ga0496108_0136075 | Ga0496108_0136075_183_2003 | 606 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2ixe-assembly1.cif.gz_A | crystal structure of the atpase domain of tap1 with atp (d645n mutant) | 0.9374 | 363 | 599 |
| 3vx4-assembly1.cif.gz_A | crystal structure of the nucleotide-binding domain of s. mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway | 0.9247 | 365 | 599 |
| 2ixg-assembly1.cif.gz_A | crystal structure of the atpase domain of tap1 with atp (s621a, g622v, d645n mutant) | 0.919 | 351 | 600 |
| 5dgx-assembly1.cif.gz_A | 1.73 angstrom resolution crystal structure of the abc-atpase domain (residues 357-609) of lipid a transport protein (msba) from francisella tularensis subsp. tularensis schu s4 in complex with adp | 0.9141 | 351 | 600 |
| 1jj7-assembly1.cif.gz_A | crystal structure of the c-terminal atpase domain of human tap1 | 0.914 | 351 | 599 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D6Q2V7_231_304_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9406 | 363 | 430 | 3.40.50.300 |
| af_P9WQJ1_326_578_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9401 | 366 | 602 | 3.40.50.300 |
| 4k8oA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9332 | 365 | 598 | 3.40.50.300 |
| af_P33311_437_692_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.926 | 362 | 603 | 3.40.50.300 |
| af_P77265_327_585_3.40.50.300 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9245 | 363 | 602 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A6N8UUM8-F1-model_v4 | ATP-binding cassette domain-containing protein | 0.9308 | 383 | 600 |
GO:0005524
GO:0016887 GO:0034040 |
| AF-A0A520GYC0-F1-model_v4 | ABC transporter ATP-binding protein | 0.93 | 363 | 597 |
GO:0005524
GO:0016887 GO:0034040 |
| AF-A0A2M6Z094-F1-model_v4 | ABC transporter ATP-binding protein | 0.9188 | 393 | 602 |
GO:0005524
GO:0015421 GO:0016887 GO:0090374 |
| AF-A0A6N8UUM8-F1-model_v4 | ATP-binding cassette domain-containing protein | 0.9187 | 383 | 600 |
GO:0005524
GO:0016887 GO:0034040 |
| AF-R6XWV0-F1-model_v4 | ABC transporter ATP-binding protein | 0.918 | 396 | 602 |
GO:0005524
GO:0016887 GO:0034040 |
Predicted Structure (AlphaFold2)
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