F246276

General Info

Members Datasets Scaffolds Average Seq Length
165 108 330 413

Family's Representative Sequence

Representative Sequence 3300025303|Ga0209051_1029595|Ga0209051_10295952
Length 431
Sequence VLYAYMSQFLIFPANFMTGMIETKVCIIGAGPGGATAALQLVQLGIDCVVVDKAVFPRDKVCGDGLSGKVLTALEAIDKGVAERLRQYAQKLGSWGVTFVSPGRVAMEVAYKPNYDRQVDEPAGFVCKRIHFDNFLVDELKRRPEIRLFEGIAIDKYELQEDGYLVTDTTGNFSVKAQLLIVANGAHSSFTKEVANIRMEPAYYAAGVRAYYKNVTGTHADNFIELHFLKPLLPGYLWIFPLPNGEANVGMDMISEAVRSRKVNLKKLLTETLENDPVFKERFRNAEMTSSIEGYGLPLGSKKRKLSGDRYMLVGDAAYLVDPFTGEGIGNALYAGRLAAQQAAAALEANDLSAAGLAPYDENVYRVLGPELQLSHRLQKLVKYPWLFNLLMKMGTRNKQLKELISCMFYEVDLRKKLARPSFYIKLLLNK

Samples

Sample ID Description Type Environment
1 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
6 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
16 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
29 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
30 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
33 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
34 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
35 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
37 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
38 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
41 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
43 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
45 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
49 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
50 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
51 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
52 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
53 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
54 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
55 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
58 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
59 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
60 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
61 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
62 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
63 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
64 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
65 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
66 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
69 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
70 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
71 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
72 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
73 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
74 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
75 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
76 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
77 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
78 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
79 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
80 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
81 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
82 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
83 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
84 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
85 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
86 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
87 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
88 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
89 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
90 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
91 2738541278 Niastella sp. CF465 Isolate Unclassified
92 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
93 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
94 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
95 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
96 2840677318 Chitinophaga alhagiae T22 Isolate Unclassified
97 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
98 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
99 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
100 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
101 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
102 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
103 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
104 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
105 2929921140 Chitinophaga sp. R-72609 Hybrid assembly Isolate Unclassified
106 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
107 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
108 8003151029 Chitinophaga sp. GbtcB8 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 86.06
Metatranscriptomes 0
Isolates 13.94

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 38.18
Nodule 0
Rhizoplane 0
Rhizosphere 36.36
Stem 0
Stem Tuber 0
Unclassified 4.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209051_1029595 3300025303 Bacteria 2140
2 SwRhRL2b_contig_1875796 2162886007 Unclassified 2468
3 JGI24740J21852_10000655 3300001979 Bacteria 14950
4 JGI24739J22299_10000559 3300001989 Bacteria 13370
5 JGI24739J22299_10001770 3300001989 Bacteria 8219
6 JGI25154J39366_1000023 3300002738 Bacteria 219569
7 JGI25154J39366_1000041 3300002738 Bacteria 144221
8 JGI25157J39369_1003039 3300002741 Bacteria 3646
9 JGI25153J46596_10003607 3300003215 Bacteria 8591
10 rootH1_10132177 3300003316 Bacteria 6344
11 rootH2_10078441 3300003320 Bacteria 11723
12 rootH2_10149900 3300003320 Bacteria 2643
13 rootL2_10025672 3300003322 Bacteria 9188
14 rootL2_10025674 3300003322 Bacteria 8042
15 rootL2_10245398 3300003322 Bacteria 4305
16 rootH1_10011868 3300003323 Bacteria 18970
17 rootH1_10012890 3300003323 Bacteria 33300
18 rootH1_10024659 3300003323 Bacteria 5272
19 rootH1_10031833 3300003323 Bacteria 9754
20 rootH1_10105587 3300003323 Bacteria 2913
21 rootH1_10119321 3300003323 Bacteria 2484
22 rootH1_10191834 3300003323 Bacteria 10571
23 rootH1_10208777 3300003323 Bacteria 6913
24 JGI25160J50197_1000961 3300003354 Bacteria 15091
25 JGI25160J50197_1001406 3300003354 Bacteria 12071
26 JGI25160J50197_1006729 3300003354 Bacteria 4613
27 JGI25160J50197_1015340 3300003354 Bacteria 2519
28 Ga0055526_1007095 3300003771 Bacteria 5915
29 Ga0055526_1009583 3300003771 Unclassified 4634
30 Ga0055528_1000177 3300003790 Bacteria 53906
31 Ga0055528_1000327 3300003790 Bacteria 39958
32 Ga0055530_10000118 3300003791 Bacteria 68596
33 Ga0055530_10002240 3300003791 Bacteria 12734
34 Ga0055531_10000054 3300003794 Bacteria 123684
35 Ga0055531_10013993 3300003794 Bacteria 3651
36 Ga0055531_10028717 3300003794 Bacteria 1911
37 Ga0065165_1000022 3300005262 Bacteria 253404
38 Ga0065165_1000027 3300005262 Bacteria 228507
39 Ga0065165_1003435 3300005262 Bacteria 11138
40 Ga0065165_1024056 3300005262 Bacteria 2054
41 Ga0065714_10074092 3300005288 Bacteria 3084
42 Ga0065704_10070892 3300005289 Bacteria 14935
43 Ga0065704_10076641 3300005289 Bacteria 5039
44 Ga0070672_100200374 3300005543 Bacteria 1669
45 Ga0097621_100021855 3300006237 Bacteria 4958
46 Ga0075428_100020803 3300006844 Bacteria 7264
47 Ga0105240_10000020 3300009093 Bacteria 399699
48 Ga0111539_10009973 3300009094 Bacteria 11974
49 Ga0111539_10237983 3300009094 Unclassified 2119
50 Ga0105242_10059809 3300009176 Bacteria 3127
51 Ga0105239_10184576 3300010375 Bacteria 2334
52 Ga0157378_10194343 3300013297 Bacteria 1916
53 Ga0163162_10070713 3300013306 Bacteria 3541
54 Ga0157372_10176329 3300013307 Unclassified 2474
55 Ga0157372_10305534 3300013307 Bacteria 1851
56 Ga0157375_10092395 3300013308 Unclassified 3090
57 Ga0163163_10226972 3300014325 Bacteria 1916
58 Ga0157380_10002401 3300014326 Bacteria 12598
59 Ga0182005_1000043 3300015265 Bacteria 140285
60 Ga0209436_100378 3300025208 Bacteria 20060
61 Ga0209436_100778 3300025208 Bacteria 13214
62 Ga0209258_100302 3300025242 Bacteria 79794
63 Ga0209646_1000004 3300025246 Bacteria 786587
64 Ga0209646_1000122 3300025246 Bacteria 144486
65 Ga0209646_1003420 3300025246 Bacteria 3139
66 Ga0209026_1000095 3300025250 Bacteria 164309
67 Ga0209026_1000329 3300025250 Bacteria 47539
68 Ga0209148_1000131 3300025254 Bacteria 174079
69 Ga0209673_1000078 3300025273 Bacteria 227727
70 Ga0209673_1000287 3300025273 Bacteria 94132
71 Ga0209130_1000679 3300025284 Bacteria 30691
72 Ga0209130_1022859 3300025284 Bacteria 1388
73 Ga0209564_1002562 3300025295 Bacteria 13980
74 Ga0209564_1003909 3300025295 Bacteria 9547
75 Ga0209564_1006314 3300025295 Bacteria 6445
76 Ga0209758_1003272 3300025297 Bacteria 15020
77 Ga0209758_1003999 3300025297 Bacteria 12761
78 Ga0209758_1006817 3300025297 Bacteria 8011
79 Ga0209758_1012838 3300025297 Unclassified 4640
80 Ga0209050_1000097 3300025298 Bacteria 239919
81 Ga0209050_1001109 3300025298 Bacteria 32601
82 Ga0207426_1000033 3300025302 Bacteria 455976
83 Ga0207426_1000456 3300025302 Bacteria 64765
84 Ga0207426_1000530 3300025302 Bacteria 55033
85 Ga0207426_1002202 3300025302 Bacteria 13112
86 Ga0209051_1011003 3300025303 Bacteria 4510
87 Ga0209257_1000070 3300025304 Bacteria 336454
88 Ga0209257_1001571 3300025304 Bacteria 26354
89 Ga0209257_1001992 3300025304 Bacteria 21936
90 Ga0207674_10098041 3300026116 Bacteria 2915
91 Ga0207428_10049395 3300027907 Bacteria 3371
92 Ga0307515_10000001 3300028794 Bacteria 4259510
93 Ga0265327_10000055 3300031251 Bacteria 247188
94 Ga0265327_10000714 3300031251 Bacteria 52495
95 Ga0265327_10002935 3300031251 Bacteria 17056
96 Ga0316584_0038438 3300036712 Bacteria 3560
97 Ga0439431_0000069 3300041997 Bacteria 16446
98 Ga0439445_0000674 3300042004 Bacteria 7076
99 Ga0466972_0000066 3300044658 Bacteria 103012
100 Ga0466972_0054636 3300044658 Bacteria 1921
101 Ga0466965_0051590 3300044683 Unclassified 2041
102 Ga0453684_0015856 3300044712 Bacteria 11846
103 Ga0466959_0010924 3300045049 Bacteria 6511
104 Ga0495627_008642 3300046453 Bacteria 3799
105 Ga0495638_0098211 3300046460 Bacteria 1755
106 Ga0495633_0000133 3300046558 Bacteria 100207
107 Ga0495668_0000423 3300046616 Bacteria 55097
108 Ga0495625_0143283 3300046660 Bacteria 1611
109 Ga0495636_0000312 3300047318 Bacteria 18829
110 Ga0495686_0000265 3300047472 Bacteria 93838
111 Ga0496121_0000081 3300048924 Bacteria 229506
112 Ga0496126_0004402 3300048929 Bacteria 16878
113 Ga0501034_0275331 3300049571 Bacteria 1623
114 Ga0501047_0049877 3300049581 Bacteria 4042
115 Ga0501047_0089130 3300049581 Bacteria 2962
116 Ga0501219_000840 3300049703 Bacteria 3926
117 Ga0501225_0004424 3300049705 Bacteria 4184
118 Ga0501269_003376 3300049766 Bacteria 1933
119 Ga0501035_0129983 3300049822 Bacteria 2196
120 Ga0501044_0096185 3300049823 Bacteria 2983
121 Ga0501044_0130706 3300049823 Bacteria 2505
122 Ga0501284_00031 3300050005 Bacteria 67688
123 nmdc:mga08y16_156788_c1 3300050511 Bacteria 2366
124 Ga0500578_0000074 3300053086 Bacteria 109442
125 Ga0500578_0000245 3300053086 Bacteria 67264
126 Ga0500578_0074542 3300053086 Bacteria 2162
127 Ga0500644_0000026 3300053088 Bacteria 93328
128 Ga0500646_0002629 3300053090 Bacteria 4650
129 Ga0500583_0002366 3300053092 Bacteria 5649
130 Ga0500651_0015149 3300053093 Bacteria 4727
131 Ga0500569_000333 3300053109 Bacteria 7539
132 Ga0500652_014538 3300053131 Bacteria 2817
133 Ga0500658_0002988 3300053134 Bacteria 6491
134 Ga0500559_0021276 3300053136 Bacteria 2748
135 Ga0500577_0000168 3300053142 Bacteria 16566
136 Ga0500589_021862 3300053147 Bacteria 2938
137 Ga0500616_0003096 3300053153 Bacteria 13042
138 Ga0500616_0004864 3300053153 Bacteria 9358
139 Ga0500622_0000157 3300053156 Bacteria 71381
140 Ga0500627_0001811 3300053158 Bacteria 6091
141 Ga0500633_0000092 3300053160 Bacteria 12594
142 Ga0500634_0018551 3300053161 Bacteria 3739
143 2738729671 2738541278 Bacteria 9755573
144 2740033640 2739367866 Bacteria 4215900
145 2819574873 2818991442 Bacteria 8318214
146 2819676809 2818991460 Bacteria 7595395
147 2821140972 2821136567 Bacteria 8080116
148 2840678896 2840677318 Bacteria 2664183
149 2883068055 2883068021 Bacteria 6192739
150 2883069068 2883068021 Bacteria 6192739
151 2884796662 2884791551 Bacteria 8511252
152 2896086712 2896085136 Bacteria 6129793
153 2896089463 2896085136 Bacteria 6129793
154 2896112957 2896109856 Bacteria 7140722
155 2896114443 2896109856 Bacteria 7140722
156 2904471472 2904467357 Bacteria 8057758
157 2929156211 2929154850 Bacteria 6753285
158 2929177818 2929177148 Bacteria 7883697
159 2929240176 2929239360 Bacteria 7745570
160 2929921887 2929921140 Bacteria 8649150
161 2929925289 2929921140 Bacteria 8649150
162 2945980166 2945977869 Bacteria 7777518
163 2946013972 2946013367 Bacteria 7766675
164 8003154046 8003151029 Bacteria 8187759
165 8003154215 8003151029 Bacteria 8187759
166 Ga0209051_1029595
167 SwRhRL2b_contig_1875796
168 JGI24740J21852_10000655
169 JGI24739J22299_10000559
170 JGI24739J22299_10001770
171 JGI25154J39366_1000023
172 JGI25154J39366_1000041
173 JGI25157J39369_1003039
174 JGI25153J46596_10003607
175 rootH1_10132177
176 rootH2_10078441
177 rootH2_10149900
178 rootL2_10025672
179 rootL2_10025674
180 rootL2_10245398
181 rootH1_10011868
182 rootH1_10012890
183 rootH1_10024659
184 rootH1_10031833
185 rootH1_10105587
186 rootH1_10119321
187 rootH1_10191834
188 rootH1_10208777
189 JGI25160J50197_1000961
190 JGI25160J50197_1001406
191 JGI25160J50197_1006729
192 JGI25160J50197_1015340
193 Ga0055526_1007095
194 Ga0055526_1009583
195 Ga0055528_1000177
196 Ga0055528_1000327
197 Ga0055530_10000118
198 Ga0055530_10002240
199 Ga0055531_10000054
200 Ga0055531_10013993
201 Ga0055531_10028717
202 Ga0065165_1000022
203 Ga0065165_1000027
204 Ga0065165_1003435
205 Ga0065165_1024056
206 Ga0065714_10074092
207 Ga0065704_10070892
208 Ga0065704_10076641
209 Ga0070672_100200374
210 Ga0097621_100021855
211 Ga0075428_100020803
212 Ga0105240_10000020
213 Ga0111539_10009973
214 Ga0111539_10237983
215 Ga0105242_10059809
216 Ga0105239_10184576
217 Ga0157378_10194343
218 Ga0163162_10070713
219 Ga0157372_10176329
220 Ga0157372_10305534
221 Ga0157375_10092395
222 Ga0163163_10226972
223 Ga0157380_10002401
224 Ga0182005_1000043
225 Ga0209436_100378
226 Ga0209436_100778
227 Ga0209258_100302
228 Ga0209646_1000004
229 Ga0209646_1000122
230 Ga0209646_1003420
231 Ga0209026_1000095
232 Ga0209026_1000329
233 Ga0209148_1000131
234 Ga0209673_1000078
235 Ga0209673_1000287
236 Ga0209130_1000679
237 Ga0209130_1022859
238 Ga0209564_1002562
239 Ga0209564_1003909
240 Ga0209564_1006314
241 Ga0209758_1003272
242 Ga0209758_1003999
243 Ga0209758_1006817
244 Ga0209758_1012838
245 Ga0209050_1000097
246 Ga0209050_1001109
247 Ga0207426_1000033
248 Ga0207426_1000456
249 Ga0207426_1000530
250 Ga0207426_1002202
251 Ga0209051_1011003
252 Ga0209257_1000070
253 Ga0209257_1001571
254 Ga0209257_1001992
255 Ga0207674_10098041
256 Ga0207428_10049395
257 Ga0307515_10000001
258 Ga0265327_10000055
259 Ga0265327_10000714
260 Ga0265327_10002935
261 Ga0316584_0038438
262 Ga0439431_0000069
263 Ga0439445_0000674
264 Ga0466972_0000066
265 Ga0466972_0054636
266 Ga0466965_0051590
267 Ga0453684_0015856
268 Ga0466959_0010924
269 Ga0495627_008642
270 Ga0495638_0098211
271 Ga0495633_0000133
272 Ga0495668_0000423
273 Ga0495625_0143283
274 Ga0495636_0000312
275 Ga0495686_0000265
276 Ga0496121_0000081
277 Ga0496126_0004402
278 Ga0501034_0275331
279 Ga0501047_0049877
280 Ga0501047_0089130
281 Ga0501219_000840
282 Ga0501225_0004424
283 Ga0501269_003376
284 Ga0501035_0129983
285 Ga0501044_0096185
286 Ga0501044_0130706
287 Ga0501284_00031
288 nmdc:mga08y16_156788_c1
289 Ga0500578_0000074
290 Ga0500578_0000245
291 Ga0500578_0074542
292 Ga0500644_0000026
293 Ga0500646_0002629
294 Ga0500583_0002366
295 Ga0500651_0015149
296 Ga0500569_000333
297 Ga0500652_014538
298 Ga0500658_0002988
299 Ga0500559_0021276
300 Ga0500577_0000168
301 Ga0500589_021862
302 Ga0500616_0003096
303 Ga0500616_0004864
304 Ga0500622_0000157
305 Ga0500627_0001811
306 Ga0500633_0000092
307 Ga0500634_0018551
308 2738729671
309 2740033640
310 2819574873
311 2819676809
312 2821140972
313 2840678896
314 2883068055
315 2883069068
316 2884796662
317 2896086712
318 2896089463
319 2896112957
320 2896114443
321 2904471472
322 2929156211
323 2929177818
324 2929240176
325 2929921887
326 2929925289
327 2945980166
328 2946013972
329 8003154046
330 8003154215

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01494

FAD_binding_3

FAD binding domain

22

229

0.85

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

23

197

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
6eod-assembly1.cif.gz_H structure of reductive aminase from aspergillus terreus in complex with nadph 0.9701 7 37
6eod-assembly3.cif.gz_D structure of reductive aminase from aspergillus terreus in complex with nadph 0.9652 7 37
6eod-assembly4.cif.gz_E structure of reductive aminase from aspergillus terreus in complex with nadph 0.965 7 37
6eod-assembly2.cif.gz_B structure of reductive aminase from aspergillus terreus in complex with nadph 0.9647 7 37
6eod-assembly3.cif.gz_C structure of reductive aminase from aspergillus terreus in complex with nadph 0.9629 7 37
ID Description Score Start End Superfamily
6eodD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9652 7 37 3.40.50.720
2vq3B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9271 8 34 3.40.50.720
af_O69721_5_180_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.909 7 39 3.40.50.720
af_Q4D0X5_1_185_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.906 8 37 3.40.50.720
3h2sB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9056 8 37 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A3S1D0G6-F1-model_v4 Geranylgeranyl reductase family protein 0.9686 6 411 GO:0016628
GO:0071949
AF-A0A3S1D0G6-F1-model_v4 Geranylgeranyl reductase family protein 0.9546 6 411 GO:0016628
GO:0071949
AF-A0A2N5ZVM1-F1-model_v4 Uncharacterized protein 0.9543 4 390 GO:0016628
AF-A0A3B8W5R3-F1-model_v4 FAD-binding domain-containing protein 0.9526 33 300
AF-A0A2N5ZVM1-F1-model_v4 Uncharacterized protein 0.9519 4 390 GO:0016628

Map