F246376

General Info

Members Datasets Scaffolds Average Seq Length
165 132 330 267

Family's Representative Sequence

Representative Sequence 3300026041|Ga0207639_10157478|Ga0207639_101574782
Length 301
Sequence VWPADIGVLSRSRAEHATLPASLISLTTPARQALDAAVQALAAVGVDDPRLDAELLLGEAMGCERSALIADGGVEVPASAGRKFGELVRRRLRREPVAYILGRKGFRHLELAVDARVLIPRPETELLVELALELQPGGVLDVGTDELPEAEVTATDTSAGALEVARGNAERLGLSERVRFVEGTLPDAEGGWDLVLANLPYVAEPDWPSLQPEVSQYEPREALLAGPDGLDAYRVLIPECAPLLSRYAEQMRGALAVEVGEGQAPAVAELMRAAGFGEVETRRDLAGIERVVLGRSVKVEA

Samples

Sample ID Description Type Environment
1 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
42 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
43 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
47 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
48 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
49 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
77 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
78 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
79 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
80 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
84 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
85 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
86 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
87 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
88 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
89 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
90 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
91 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
92 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
95 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
98 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
99 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
100 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
101 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
102 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
103 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
104 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
105 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
110 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
111 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
120 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
121 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
124 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
125 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
126 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
127 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
128 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
129 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
130 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
131 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
132 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.42
Nodule 0
Rhizoplane 11.52
Rhizosphere 83.64
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207639_10157478 3300026041 Bacteria 1910
2 JGI24746J21847_1000325 3300001977 Bacteria 6838
3 rootH2_10282071 3300003320 Bacteria 1576
4 Ga0070683_100007429 3300005329 Bacteria 9261
5 Ga0070683_100051722 3300005329 Bacteria 3804
6 Ga0070670_100108860 3300005331 Bacteria 2388
7 Ga0070682_100024599 3300005337 Bacteria 3585
8 Ga0070675_100000053 3300005354 Bacteria 70601
9 Ga0070674_100000008 3300005356 Bacteria 143844
10 Ga0070674_100000082 3300005356 Bacteria 44418
11 Ga0070688_100000492 3300005365 Bacteria 20007
12 Ga0070714_100242283 3300005435 Bacteria 1664
13 Ga0070713_100000009 3300005436 Bacteria 153056
14 Ga0070678_100197472 3300005456 Bacteria 1658
15 Ga0070685_10000018 3300005466 Bacteria 110132
16 Ga0070684_100007568 3300005535 Bacteria 8458
17 Ga0070684_100079423 3300005535 Bacteria 2900
18 Ga0068853_100186165 3300005539 Bacteria 1885
19 Ga0070665_100000244 3300005548 Bacteria 90284
20 Ga0068854_100000031 3300005578 Bacteria 107298
21 Ga0068854_100076643 3300005578 Bacteria 2458
22 Ga0068856_100002478 3300005614 Bacteria 19005
23 Ga0068856_100109100 3300005614 Bacteria 2764
24 Ga0068852_100000012 3300005616 Bacteria 140734
25 Ga0068864_100000045 3300005618 Bacteria 154739
26 Ga0068866_10000001 3300005718 Bacteria 519680
27 Ga0068866_10000170 3300005718 Bacteria 30223
28 Ga0068861_100108165 3300005719 Bacteria 2224
29 Ga0068861_100582812 3300005719 Bacteria 1024
30 Ga0068851_10000333 3300005834 Bacteria 21364
31 Ga0068858_100000109 3300005842 Bacteria 86772
32 Ga0068858_100000450 3300005842 Bacteria 43091
33 Ga0068860_100003539 3300005843 Bacteria 16070
34 Ga0068862_100003250 3300005844 Bacteria 14059
35 Ga0075365_10152313 3300006038 Bacteria 1609
36 Ga0070712_100127392 3300006175 Bacteria 1925
37 Ga0075428_100217835 3300006844 Bacteria 2062
38 Ga0075431_100000548 3300006847 Bacteria 31565
39 Ga0075434_100000991 3300006871 Bacteria 22987
40 Ga0068865_100000402 3300006881 Bacteria 24075
41 Ga0075435_100053254 3300007076 Bacteria 3263
42 Ga0111539_10012827 3300009094 Bacteria 10490
43 Ga0105245_10000180 3300009098 Bacteria 59695
44 Ga0105245_10000619 3300009098 Bacteria 32213
45 Ga0105245_10075642 3300009098 Bacteria 3066
46 Ga0114129_10011633 3300009147 Bacteria 12527
47 Ga0114129_10339528 3300009147 Bacteria 1993
48 Ga0105242_10017273 3300009176 Bacteria 5619
49 Ga0105248_10000118 3300009177 Bacteria 90018
50 Ga0105249_10593304 3300009553 Bacteria 1162
51 Ga0105239_10601736 3300010375 Bacteria 1254
52 Ga0157371_10007587 3300013102 Bacteria 8752
53 Ga0157370_10207194 3300013104 Bacteria 1818
54 Ga0157369_10000142 3300013105 Bacteria 101760
55 Ga0157374_10004501 3300013296 Bacteria 11709
56 Ga0157372_10003159 3300013307 Bacteria 17764
57 Ga0157375_10000367 3300013308 Bacteria 41173
58 Ga0163163_10058292 3300014325 Bacteria 3818
59 Ga0207426_1006386 3300025302 Bacteria 5138
60 Ga0207656_10000537 3300025321 Bacteria 12555
61 Ga0207642_10000006 3300025899 Bacteria 230268
62 Ga0207642_10000007 3300025899 Bacteria 226017
63 Ga0207642_10000100 3300025899 Bacteria 22988
64 Ga0207693_10142209 3300025915 Bacteria 1886
65 Ga0207652_10350489 3300025921 Bacteria 1332
66 Ga0207650_10054560 3300025925 Bacteria 2965
67 Ga0207659_10000010 3300025926 Bacteria 286639
68 Ga0207687_10000007 3300025927 Bacteria 604185
69 Ga0207687_10000269 3300025927 Bacteria 35470
70 Ga0207700_10000025 3300025928 Bacteria 147429
71 Ga0207686_10010918 3300025934 Bacteria 4954
72 Ga0207669_10000004 3300025937 Bacteria 196828
73 Ga0207669_10000012 3300025937 Bacteria 138242
74 Ga0207704_10000190 3300025938 Bacteria 32246
75 Ga0207665_10214010 3300025939 Bacteria 1409
76 Ga0207711_10000020 3300025941 Bacteria 363325
77 Ga0207661_10005133 3300025944 Bacteria 9197
78 Ga0207661_10013905 3300025944 Bacteria 5883
79 Ga0207712_10393869 3300025961 Bacteria 1162
80 Ga0207640_10000015 3300025981 Bacteria 215411
81 Ga0207703_10000040 3300026035 Bacteria 168191
82 Ga0207703_10000322 3300026035 Bacteria 52048
83 Ga0207702_10000016 3300026078 Bacteria 226633
84 Ga0207676_10000016 3300026095 Bacteria 311561
85 Ga0207674_10201798 3300026116 Bacteria 1938
86 Ga0207675_100242969 3300026118 Bacteria 1740
87 Ga0207683_10078156 3300026121 Bacteria 2932
88 Ga0207698_10000012 3300026142 Bacteria 260061
89 Ga0207428_10182978 3300027907 Bacteria 1583
90 Ga0268266_10000020 3300028379 Bacteria 527065
91 Ga0268265_10052047 3300028380 Bacteria 3094
92 Ga0268264_10034313 3300028381 Bacteria 4173
93 Ga0307415_100009738 3300032126 Bacteria 5407
94 Ga0400483_211822 3300039062 Bacteria 1046
95 Ga0451839_1211566 3300041496 Bacteria 1926
96 Ga0466963_0344734 3300044694 Bacteria 1049
97 Ga0466957_0000501 3300044842 Bacteria 19646
98 Ga0466967_0226556 3300045976 Bacteria 1778
99 Ga0466967_0302883 3300045976 Bacteria 1538
100 Ga0466967_0445243 3300045976 Bacteria 1265
101 Ga0495592_0151101 3300046454 Bacteria 1606
102 Ga0495603_0007931 3300046455 Bacteria 6407
103 Ga0495629_0000189 3300046459 Bacteria 55743
104 Ga0495641_0053512 3300046461 Bacteria 1836
105 Ga0495582_0000029 3300046473 Bacteria 77919
106 Ga0495606_0000221 3300046507 Bacteria 101157
107 Ga0495608_0000031 3300046511 Bacteria 145255
108 Ga0495610_0048100 3300046512 Bacteria 2095
109 Ga0495628_0190651 3300046516 Bacteria 1548
110 Ga0495630_0086434 3300046517 Bacteria 2368
111 Ga0495644_0000535 3300046523 Bacteria 16123
112 Ga0495652_0004947 3300046529 Bacteria 12631
113 Ga0495621_0030870 3300046539 Bacteria 1834
114 Ga0495645_0069625 3300046543 Bacteria 2540
115 Ga0495657_0000024 3300046675 Bacteria 145255
116 Ga0495647_0000025 3300046681 Bacteria 65184
117 Ga0495647_0091398 3300046681 Bacteria 1248
118 Ga0495658_0000026 3300046683 Bacteria 77681
119 Ga0495658_0065703 3300046683 Bacteria 2093
120 Ga0495613_0138581 3300046689 Bacteria 1739
121 Ga0495604_0000019 3300047317 Bacteria 175064
122 Ga0495604_0002440 3300047317 Bacteria 14879
123 Ga0495676_0288914 3300047321 Bacteria 1108
124 Ga0495680_0000061 3300047322 Bacteria 90676
125 Ga0495675_0002603 3300047444 Bacteria 10813
126 Ga0495675_0097953 3300047444 Bacteria 1837
127 Ga0495593_0011767 3300047673 Bacteria 5018
128 Ga0495602_0000021 3300048088 Bacteria 168585
129 Ga0496100_0000002 3300048903 Bacteria 489057
130 Ga0496101_0000001 3300048904 Bacteria 489057
131 Ga0496104_0000009 3300048907 Bacteria 488055
132 Ga0496104_0035548 3300048907 Bacteria 4652
133 Ga0496105_0000027 3300048908 Bacteria 148197
134 Ga0496105_0027203 3300048908 Bacteria 4670
135 Ga0496106_0000149 3300048909 Bacteria 51656
136 Ga0496106_0022376 3300048909 Bacteria 4695
137 Ga0496107_0000013 3300048910 Bacteria 178284
138 Ga0496108_0000107 3300048911 Bacteria 86395
139 Ga0496108_0000132 3300048911 Bacteria 73888
140 Ga0496109_0000007 3300048912 Bacteria 247554
141 Ga0496109_0000190 3300048912 Bacteria 61169
142 Ga0496109_0299920 3300048912 Bacteria 1515
143 Ga0496110_0005142 3300048913 Bacteria 10223
144 Ga0496112_0016191 3300048915 Bacteria 6977
145 Ga0496113_0000234 3300048916 Bacteria 26164
146 Ga0496114_0000014 3300048917 Bacteria 297902
147 Ga0496115_0000316 3300048918 Bacteria 41025
148 Ga0496124_0038418 3300048927 Bacteria 4158
149 Ga0501044_0581939 3300049823 Bacteria 1014
150 nmdc:mga0yw44_17767_c1 3300050492 Bacteria 3879
151 nmdc:mga05p37_12014_c1 3300050507 Bacteria 10330
152 nmdc:mga06r32_2921_c1 3300050510 Bacteria 15326
153 nmdc:mga08y16_12684_c1 3300050511 Bacteria 8865
154 nmdc:mga0n895_119184_c1 3300050512 Bacteria 2660
155 nmdc:mga0rr50_19408_c1 3300050513 Bacteria 4587
156 Ga0495601_0000039 3300053077 Bacteria 79594
157 Ga0495601_0000258 3300053077 Bacteria 28539
158 Ga0495612_0000811 3300053078 Bacteria 12734
159 Ga0495612_0003045 3300053078 Bacteria 6953
160 Ga0495612_0008696 3300053078 Bacteria 4118
161 Ga0495655_0000001 3300053083 Bacteria 419518
162 Ga0495595_0000014 3300053084 Bacteria 145255
163 Ga0495619_0000055 3300053085 Bacteria 95570
164 Ga0495619_0000147 3300053085 Bacteria 51947
165 Ga0500628_000017 3300053129 Bacteria 90481
166 Ga0207639_10157478
167 JGI24746J21847_1000325
168 rootH2_10282071
169 Ga0070683_100007429
170 Ga0070683_100051722
171 Ga0070670_100108860
172 Ga0070682_100024599
173 Ga0070675_100000053
174 Ga0070674_100000008
175 Ga0070674_100000082
176 Ga0070688_100000492
177 Ga0070714_100242283
178 Ga0070713_100000009
179 Ga0070678_100197472
180 Ga0070685_10000018
181 Ga0070684_100007568
182 Ga0070684_100079423
183 Ga0068853_100186165
184 Ga0070665_100000244
185 Ga0068854_100000031
186 Ga0068854_100076643
187 Ga0068856_100002478
188 Ga0068856_100109100
189 Ga0068852_100000012
190 Ga0068864_100000045
191 Ga0068866_10000001
192 Ga0068866_10000170
193 Ga0068861_100108165
194 Ga0068861_100582812
195 Ga0068851_10000333
196 Ga0068858_100000109
197 Ga0068858_100000450
198 Ga0068860_100003539
199 Ga0068862_100003250
200 Ga0075365_10152313
201 Ga0070712_100127392
202 Ga0075428_100217835
203 Ga0075431_100000548
204 Ga0075434_100000991
205 Ga0068865_100000402
206 Ga0075435_100053254
207 Ga0111539_10012827
208 Ga0105245_10000180
209 Ga0105245_10000619
210 Ga0105245_10075642
211 Ga0114129_10011633
212 Ga0114129_10339528
213 Ga0105242_10017273
214 Ga0105248_10000118
215 Ga0105249_10593304
216 Ga0105239_10601736
217 Ga0157371_10007587
218 Ga0157370_10207194
219 Ga0157369_10000142
220 Ga0157374_10004501
221 Ga0157372_10003159
222 Ga0157375_10000367
223 Ga0163163_10058292
224 Ga0207426_1006386
225 Ga0207656_10000537
226 Ga0207642_10000006
227 Ga0207642_10000007
228 Ga0207642_10000100
229 Ga0207693_10142209
230 Ga0207652_10350489
231 Ga0207650_10054560
232 Ga0207659_10000010
233 Ga0207687_10000007
234 Ga0207687_10000269
235 Ga0207700_10000025
236 Ga0207686_10010918
237 Ga0207669_10000004
238 Ga0207669_10000012
239 Ga0207704_10000190
240 Ga0207665_10214010
241 Ga0207711_10000020
242 Ga0207661_10005133
243 Ga0207661_10013905
244 Ga0207712_10393869
245 Ga0207640_10000015
246 Ga0207703_10000040
247 Ga0207703_10000322
248 Ga0207702_10000016
249 Ga0207676_10000016
250 Ga0207674_10201798
251 Ga0207675_100242969
252 Ga0207683_10078156
253 Ga0207698_10000012
254 Ga0207428_10182978
255 Ga0268266_10000020
256 Ga0268265_10052047
257 Ga0268264_10034313
258 Ga0307415_100009738
259 Ga0400483_211822
260 Ga0451839_1211566
261 Ga0466963_0344734
262 Ga0466957_0000501
263 Ga0466967_0226556
264 Ga0466967_0302883
265 Ga0466967_0445243
266 Ga0495592_0151101
267 Ga0495603_0007931
268 Ga0495629_0000189
269 Ga0495641_0053512
270 Ga0495582_0000029
271 Ga0495606_0000221
272 Ga0495608_0000031
273 Ga0495610_0048100
274 Ga0495628_0190651
275 Ga0495630_0086434
276 Ga0495644_0000535
277 Ga0495652_0004947
278 Ga0495621_0030870
279 Ga0495645_0069625
280 Ga0495657_0000024
281 Ga0495647_0000025
282 Ga0495647_0091398
283 Ga0495658_0000026
284 Ga0495658_0065703
285 Ga0495613_0138581
286 Ga0495604_0000019
287 Ga0495604_0002440
288 Ga0495676_0288914
289 Ga0495680_0000061
290 Ga0495675_0002603
291 Ga0495675_0097953
292 Ga0495593_0011767
293 Ga0495602_0000021
294 Ga0496100_0000002
295 Ga0496101_0000001
296 Ga0496104_0000009
297 Ga0496104_0035548
298 Ga0496105_0000027
299 Ga0496105_0027203
300 Ga0496106_0000149
301 Ga0496106_0022376
302 Ga0496107_0000013
303 Ga0496108_0000107
304 Ga0496108_0000132
305 Ga0496109_0000007
306 Ga0496109_0000190
307 Ga0496109_0299920
308 Ga0496110_0005142
309 Ga0496112_0016191
310 Ga0496113_0000234
311 Ga0496114_0000014
312 Ga0496115_0000316
313 Ga0496124_0038418
314 Ga0501044_0581939
315 nmdc:mga0yw44_17767_c1
316 nmdc:mga05p37_12014_c1
317 nmdc:mga06r32_2921_c1
318 nmdc:mga08y16_12684_c1
319 nmdc:mga0n895_119184_c1
320 nmdc:mga0rr50_19408_c1
321 Ga0495601_0000039
322 Ga0495601_0000258
323 Ga0495612_0000811
324 Ga0495612_0003045
325 Ga0495612_0008696
326 Ga0495655_0000001
327 Ga0495595_0000014
328 Ga0495619_0000055
329 Ga0495619_0000147
330 Ga0500628_000017

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17827

PrmC_N

PrmC N-terminal domain

32

102

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1t43-assembly1.cif.gz_A crystal structure analysis of e.coli protein (n5)-glutamine methyltransferase (hemk) 0.8156 22 262
1sg9-assembly2.cif.gz_B crystal structure of thermotoga maritima protein hemk, an n5-glutamine methyltransferase 0.7666 25 264
1nv8-assembly2.cif.gz_B n5-glutamine methyltransferase, hemk 0.7662 25 264
1nv9-assembly1.cif.gz_A hemk, apo structure 0.7574 25 265
1vq1-assembly1.cif.gz_A crystal structure of n5-glutamine methyltransferase, hemk(ec 2.1.1.-) (tm0488) from thermotoga maritima at 2.80 a resolution 0.7463 21 265
ID Description Score Start End Superfamily
af_P0ACC1_1_83_1.10.8.10 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Ubiquitin-associated (UBA) domain 0.9701 21 104 1.10.8.10
2b3tA01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Ubiquitin-associated (UBA) domain 0.949 21 106 1.10.8.10
af_P0ACC1_1_83_1.10.8.10 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Ubiquitin-associated (UBA) domain 0.9475 21 104 1.10.8.10
2b3tA01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Ubiquitin-associated (UBA) domain 0.9383 21 106 1.10.8.10
1t43A01 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Ubiquitin-associated (UBA) domain 0.9311 22 106 1.10.8.10
ID Description Score Start End GO Terms
AF-A0A4Q2Z388-F1-model_v4 Peptide chain release factor N(5)-glutamine methyltransferase 0.9525 21 114 GO:0008168
GO:0032259
AF-A0A2V9L145-F1-model_v4 Release factor glutamine methyltransferase N-terminal domain-containing protein 0.9515 21 110
AF-A0A3B9M715-F1-model_v4 Peptide chain release factor N(5)-glutamine methyltransferase 0.9489 21 106 GO:0008168
GO:0032259
AF-A0A2V9L145-F1-model_v4 Release factor glutamine methyltransferase N-terminal domain-containing protein 0.9415 21 110
AF-A0A536FT08-F1-model_v4 Peptide chain release factor N(5)-glutamine methyltransferase 0.9389 22 107 GO:0008168
GO:0032259

Map