F246552

General Info

Members Datasets Scaffolds Average Seq Length
165 58 330 240

Family's Representative Sequence

Representative Sequence 3300033528|Ga0316588_1000686|Ga0316588_10006862
Length 259
Sequence VENGSKWQEGTYLSSLTVVYASVFYLAFLTLLGGLAFKITKYATVPAPLKIPTTPAPVTQGGVVLRIIREVVFFESLFKGAKWIWAFGWLFHISLLLVLLRHTRYFLPWVPEPIVLIQPFGMYAGFTMIVGLAGLWARRFLVDRVRYISAPSDHLILALIILIGLSGLGMKFLVHTDVASVKAFFQGLMTFHWHELPDDPLLVVHLSLVAVLMIIFPYSKLLHAPGIFFSPTRNQIDNPREQRHLSEWARRLEQHEGQG

Samples

Sample ID Description Type Environment
1 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
4 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
5 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
6 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
7 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
8 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
9 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
10 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
11 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
12 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
13 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
14 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
15 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
16 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
17 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
18 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
19 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
20 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
21 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
22 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
23 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
24 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
25 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
26 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
27 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
28 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
29 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
30 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
31 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
32 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
33 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
34 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
35 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
36 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
37 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
38 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
39 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
40 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
41 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
42 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
43 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
44 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
45 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
46 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
47 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
48 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
49 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
50 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
51 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
52 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
53 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
54 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
55 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
56 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
57 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
58 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.33
Metatranscriptomes 26.67
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 0.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316588_1000686 3300033528 Bacteria 4947
2 Ga0065707_10085058 3300005295 Bacteria 6499
3 Ga0265336_10003160 3300028666 Bacteria 6552
4 Ga0265324_10000005 3300029957 Bacteria 347038
5 Ga0265325_10008145 3300031241 Bacteria 6209
6 Ga0265331_10015536 3300031250 Bacteria 4017
7 Ga0265327_10101519 3300031251 Bacteria 1387
8 Ga0265316_10164624 3300031344 Bacteria 1657
9 Ga0265313_10000346 3300031595 Bacteria 50381
10 Ga0316575_10002255 3300031665 Bacteria 6441
11 Ga0316575_10025859 3300031665 Bacteria 2278
12 Ga0316575_10036997 3300031665 Bacteria 1921
13 Ga0316575_10041842 3300031665 Bacteria 1813
14 Ga0265314_10065063 3300031711 Bacteria 2465
15 Ga0316576_10014828 3300031727 Bacteria 5212
16 Ga0316576_10017441 3300031727 Bacteria 4877
17 Ga0316576_10037283 3300031727 Bacteria 3480
18 Ga0316576_10084878 3300031727 Bacteria 2353
19 Ga0316576_10194252 3300031727 Bacteria 1530
20 Ga0316576_10241230 3300031727 Bacteria 1358
21 Ga0316578_10048293 3300031728 Bacteria 2485
22 Ga0316578_10071758 3300031728 Bacteria 2051
23 Ga0316578_10104437 3300031728 Bacteria 1699
24 Ga0316577_10020344 3300031733 Bacteria 3678
25 Ga0316577_10034507 3300031733 Bacteria 2827
26 Ga0316577_10137288 3300031733 Bacteria 1377
27 Ga0316583_10004318 3300032133 Bacteria 5069
28 Ga0316583_10009872 3300032133 Bacteria 3439
29 Ga0316585_10052906 3300032137 Bacteria 1305
30 Ga0316580_10003963 3300032139 Bacteria 4257
31 Ga0316580_10004859 3300032139 Bacteria 3907
32 Ga0316593_10000057 3300032168 Bacteria 12699
33 Ga0316593_10000066 3300032168 Bacteria 12417
34 Ga0316593_10000078 3300032168 Bacteria 11839
35 Ga0316593_10000317 3300032168 Bacteria 8288
36 Ga0316593_10000522 3300032168 Bacteria 7129
37 Ga0316593_10001991 3300032168 Bacteria 4707
38 Ga0316593_10004772 3300032168 Bacteria 3515
39 Ga0316593_10005339 3300032168 Bacteria 3379
40 Ga0316593_10005488 3300032168 Bacteria 3350
41 Ga0316593_10006991 3300032168 Bacteria 3076
42 Ga0316593_10016793 3300032168 Bacteria 2224
43 Ga0316593_10019449 3300032168 Bacteria 2099
44 Ga0316593_10026772 3300032168 Bacteria 1846
45 Ga0316593_10085250 3300032168 Bacteria 1107
46 Ga0316593_10143581 3300032168 Bacteria 865
47 Ga0316592_1002883 3300033524 Bacteria 3028
48 Ga0316592_1009946 3300033524 Bacteria 1910
49 Ga0316592_1011528 3300033524 Bacteria 1798
50 Ga0316592_1021088 3300033524 Bacteria 1386
51 Ga0316586_1000085 3300033527 Bacteria 6668
52 Ga0316586_1000687 3300033527 Bacteria 3416
53 Ga0316586_1001040 3300033527 Bacteria 2998
54 Ga0316586_1002713 3300033527 Bacteria 2242
55 Ga0316588_1003311 3300033528 Bacteria 2921
56 Ga0316588_1004645 3300033528 Bacteria 2616
57 Ga0316588_1005188 3300033528 Bacteria 2520
58 Ga0316588_1014430 3300033528 Bacteria 1729
59 Ga0316587_1000257 3300033529 Bacteria 4795
60 Ga0316587_1000617 3300033529 Bacteria 3762
61 Ga0316587_1007574 3300033529 Bacteria 1688
62 Ga0316596_1000113 3300033541 Bacteria 10478
63 Ga0316596_1000299 3300033541 Bacteria 7862
64 Ga0316596_1003020 3300033541 Bacteria 3653
65 Ga0316596_1005042 3300033541 Bacteria 2996
66 Ga0316596_1005524 3300033541 Bacteria 2893
67 Ga0316596_1008577 3300033541 Bacteria 2441
68 Ga0316596_1009162 3300033541 Bacteria 2372
69 Ga0316596_1009679 3300033541 Bacteria 2314
70 Ga0316596_1011833 3300033541 Bacteria 2139
71 Ga0316596_1011944 3300033541 Bacteria 2130
72 Ga0316596_1013011 3300033541 Bacteria 2052
73 Ga0316596_1016325 3300033541 Unclassified 1859
74 Ga0316596_1073992 3300033541 Bacteria 913
75 Ga0373951_0019965 3300035091 Bacteria 1532
76 Ga0316574_0008415 3300035398 Bacteria 5726
77 Ga0316574_0010207 3300035398 Bacteria 5295
78 Ga0316574_0015247 3300035398 Bacteria 4458
79 Ga0316574_0048692 3300035398 Bacteria 2633
80 Ga0316574_0050674 3300035398 Bacteria 2585
81 Ga0316574_0221595 3300035398 Bacteria 1212
82 Ga0373924_0000584 3300035410 Bacteria 11229
83 Ga0316582_0047730 3300036647 Bacteria 2705
84 Ga0316582_0080440 3300036647 Bacteria 2127
85 Ga0316582_0090050 3300036647 Bacteria 2018
86 Ga0316582_0094246 3300036647 Bacteria 1975
87 Ga0316582_0108692 3300036647 Bacteria 1844
88 Ga0316582_0161432 3300036647 Bacteria 1518
89 Ga0316582_0179986 3300036647 Bacteria 1438
90 Ga0316582_0286906 3300036647 Bacteria 1130
91 Ga0316584_0020862 3300036712 Bacteria 4757
92 Ga0316584_0038370 3300036712 Bacteria 3563
93 Ga0316584_0041454 3300036712 Bacteria 3431
94 Ga0316584_0055175 3300036712 Bacteria 2975
95 Ga0316584_0071835 3300036712 Bacteria 2593
96 Ga0316584_0110512 3300036712 Bacteria 2057
97 Ga0395899_0138395 3300037312 Bacteria 1734
98 Ga0395900_0015964 3300037418 Bacteria 7651
99 Ga0395905_0043287 3300037471 Bacteria 4224
100 Ga0439435_0000113 3300042436 Bacteria 10379
101 Ga0451577_0000002 3300042876 Bacteria 1731375
102 Ga0451577_0000613 3300042876 Bacteria 57448
103 Ga0451577_0002704 3300042876 Bacteria 20631
104 Ga0451577_0038670 3300042876 Bacteria 4290
105 Ga0451577_0178323 3300042876 Bacteria 1915
106 Ga0451577_0463293 3300042876 Bacteria 1151
107 Ga0453683_0000003 3300044673 Bacteria 942572
108 Ga0453683_0011037 3300044673 Bacteria 5971
109 Ga0453683_0029423 3300044673 Bacteria 3473
110 Ga0453683_0143260 3300044673 Bacteria 1509
111 Ga0453684_0000002 3300044712 Bacteria 1731375
112 Ga0453684_0000005 3300044712 Bacteria 1431632
113 Ga0453684_0000029 3300044712 Bacteria 757969
114 Ga0453684_0000048 3300044712 Bacteria 559743
115 Ga0453684_0000077 3300044712 Bacteria 435536
116 Ga0453684_0003047 3300044712 Bacteria 38939
117 Ga0453684_0011034 3300044712 Bacteria 15264
118 Ga0453684_0049571 3300044712 Bacteria 5535
119 Ga0453684_0067349 3300044712 Bacteria 4553
120 Ga0453684_0276978 3300044712 Bacteria 1915
121 Ga0453684_0277067 3300044712 Bacteria 1914
122 Ga0453684_0348989 3300044712 Bacteria 1669
123 Ga0451576_0000004 3300045051 Bacteria 1312238
124 Ga0451576_0001076 3300045051 Bacteria 50068
125 Ga0451576_0007974 3300045051 Bacteria 12523
126 Ga0451576_0008656 3300045051 Bacteria 11917
127 Ga0451576_0061535 3300045051 Bacteria 3914
128 Ga0451576_0062045 3300045051 Bacteria 3897
129 Ga0451576_0078190 3300045051 Bacteria 3443
130 Ga0451576_0079842 3300045051 Bacteria 3404
131 Ga0451576_0341106 3300045051 Bacteria 1569
132 Ga0451576_0418684 3300045051 Bacteria 1405
133 Ga0495586_0034019 3300046535 Bacteria 2736
134 Ga0501033_0080551 3300049570 Bacteria 2389
135 Ga0501038_0146036 3300049574 Bacteria 1931
136 Ga0501038_0272476 3300049574 Bacteria 1334
137 Ga0501040_0111841 3300049576 Bacteria 1910
138 Ga0501041_0007501 3300049577 Bacteria 6401
139 Ga0501041_0233103 3300049577 Bacteria 1156
140 Ga0501042_0228773 3300049578 Bacteria 1341
141 Ga0501046_0025685 3300049580 Bacteria 4818
142 Ga0501046_0187423 3300049580 Bacteria 1545
143 Ga0501048_0023067 3300049582 Bacteria 4549
144 Ga0501071_0006723 3300049587 Bacteria 7480
145 Ga0501072_0014542 3300049588 Bacteria 6030
146 Ga0501072_0017327 3300049588 Bacteria 5535
147 Ga0501074_0121869 3300049590 Bacteria 1865
148 Ga0501075_0116895 3300049591 Bacteria 2027
149 Ga0501076_0000535 3300049592 Bacteria 24232
150 Ga0501076_0050905 3300049592 Bacteria 3277
151 Ga0501077_0020284 3300049593 Bacteria 4207
152 Ga0501077_0022540 3300049593 Bacteria 3989
153 Ga0501079_0004263 3300049741 Bacteria 10610
154 Ga0501079_0027310 3300049741 Bacteria 4375
155 Ga0501080_0010091 3300049742 Bacteria 8635
156 Ga0501080_0026361 3300049742 Bacteria 5401
157 Ga0501081_0126640 3300049743 Bacteria 1822
158 Ga0501083_0333502 3300049744 Bacteria 986
159 Ga0501035_0084463 3300049822 Bacteria 2800
160 Ga0501045_0000126 3300049824 Bacteria 40036
161 Ga0501084_0010373 3300054114 Bacteria 7707
162 Ga0501082_0003598 3300060353 Bacteria 13538
163 Ga0501082_0283064 3300060353 Bacteria 1443
164 Ga0530510_0000258 3300061734 Bacteria 33289
165 Ga0530510_0002004 3300061734 Bacteria 13980
166 Ga0316588_1000686
167 Ga0065707_10085058
168 Ga0265336_10003160
169 Ga0265324_10000005
170 Ga0265325_10008145
171 Ga0265331_10015536
172 Ga0265327_10101519
173 Ga0265316_10164624
174 Ga0265313_10000346
175 Ga0316575_10002255
176 Ga0316575_10025859
177 Ga0316575_10036997
178 Ga0316575_10041842
179 Ga0265314_10065063
180 Ga0316576_10014828
181 Ga0316576_10017441
182 Ga0316576_10037283
183 Ga0316576_10084878
184 Ga0316576_10194252
185 Ga0316576_10241230
186 Ga0316578_10048293
187 Ga0316578_10071758
188 Ga0316578_10104437
189 Ga0316577_10020344
190 Ga0316577_10034507
191 Ga0316577_10137288
192 Ga0316583_10004318
193 Ga0316583_10009872
194 Ga0316585_10052906
195 Ga0316580_10003963
196 Ga0316580_10004859
197 Ga0316593_10000057
198 Ga0316593_10000066
199 Ga0316593_10000078
200 Ga0316593_10000317
201 Ga0316593_10000522
202 Ga0316593_10001991
203 Ga0316593_10004772
204 Ga0316593_10005339
205 Ga0316593_10005488
206 Ga0316593_10006991
207 Ga0316593_10016793
208 Ga0316593_10019449
209 Ga0316593_10026772
210 Ga0316593_10085250
211 Ga0316593_10143581
212 Ga0316592_1002883
213 Ga0316592_1009946
214 Ga0316592_1011528
215 Ga0316592_1021088
216 Ga0316586_1000085
217 Ga0316586_1000687
218 Ga0316586_1001040
219 Ga0316586_1002713
220 Ga0316588_1003311
221 Ga0316588_1004645
222 Ga0316588_1005188
223 Ga0316588_1014430
224 Ga0316587_1000257
225 Ga0316587_1000617
226 Ga0316587_1007574
227 Ga0316596_1000113
228 Ga0316596_1000299
229 Ga0316596_1003020
230 Ga0316596_1005042
231 Ga0316596_1005524
232 Ga0316596_1008577
233 Ga0316596_1009162
234 Ga0316596_1009679
235 Ga0316596_1011833
236 Ga0316596_1011944
237 Ga0316596_1013011
238 Ga0316596_1016325
239 Ga0316596_1073992
240 Ga0373951_0019965
241 Ga0316574_0008415
242 Ga0316574_0010207
243 Ga0316574_0015247
244 Ga0316574_0048692
245 Ga0316574_0050674
246 Ga0316574_0221595
247 Ga0373924_0000584
248 Ga0316582_0047730
249 Ga0316582_0080440
250 Ga0316582_0090050
251 Ga0316582_0094246
252 Ga0316582_0108692
253 Ga0316582_0161432
254 Ga0316582_0179986
255 Ga0316582_0286906
256 Ga0316584_0020862
257 Ga0316584_0038370
258 Ga0316584_0041454
259 Ga0316584_0055175
260 Ga0316584_0071835
261 Ga0316584_0110512
262 Ga0395899_0138395
263 Ga0395900_0015964
264 Ga0395905_0043287
265 Ga0439435_0000113
266 Ga0451577_0000002
267 Ga0451577_0000613
268 Ga0451577_0002704
269 Ga0451577_0038670
270 Ga0451577_0178323
271 Ga0451577_0463293
272 Ga0453683_0000003
273 Ga0453683_0011037
274 Ga0453683_0029423
275 Ga0453683_0143260
276 Ga0453684_0000002
277 Ga0453684_0000005
278 Ga0453684_0000029
279 Ga0453684_0000048
280 Ga0453684_0000077
281 Ga0453684_0003047
282 Ga0453684_0011034
283 Ga0453684_0049571
284 Ga0453684_0067349
285 Ga0453684_0276978
286 Ga0453684_0277067
287 Ga0453684_0348989
288 Ga0451576_0000004
289 Ga0451576_0001076
290 Ga0451576_0007974
291 Ga0451576_0008656
292 Ga0451576_0061535
293 Ga0451576_0062045
294 Ga0451576_0078190
295 Ga0451576_0079842
296 Ga0451576_0341106
297 Ga0451576_0418684
298 Ga0495586_0034019
299 Ga0501033_0080551
300 Ga0501038_0146036
301 Ga0501038_0272476
302 Ga0501040_0111841
303 Ga0501041_0007501
304 Ga0501041_0233103
305 Ga0501042_0228773
306 Ga0501046_0025685
307 Ga0501046_0187423
308 Ga0501048_0023067
309 Ga0501071_0006723
310 Ga0501072_0014542
311 Ga0501072_0017327
312 Ga0501074_0121869
313 Ga0501075_0116895
314 Ga0501076_0000535
315 Ga0501076_0050905
316 Ga0501077_0020284
317 Ga0501077_0022540
318 Ga0501079_0004263
319 Ga0501079_0027310
320 Ga0501080_0010091
321 Ga0501080_0026361
322 Ga0501081_0126640
323 Ga0501083_0333502
324 Ga0501035_0084463
325 Ga0501045_0000126
326 Ga0501084_0010373
327 Ga0501082_0003598
328 Ga0501082_0283064
329 Ga0530510_0000258
330 Ga0530510_0002004

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02665

Nitrate_red_gam

Nitrate reductase gamma subunit

75

233

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1y5i-assembly1.cif.gz_C the crystal structure of the narghi mutant nari-k86a 0.7262 11 211
1y4z-assembly1.cif.gz_C the crystal structure of nitrate reductase a, narghi, in complex with the q-site inhibitor pentachlorophenol 0.7259 11 211
1y5n-assembly1.cif.gz_C the crystal structure of the narghi mutant nari-k86a in complex with pentachlorophenol 0.6931 11 211
1siw-assembly1.cif.gz_C crystal structure of the apomolybdo-narghi 0.6836 11 211
3ir5-assembly1.cif.gz_C crystal structure of narghi mutant narg-h49c 0.6782 11 211
ID Description Score Start End Superfamily
1siwC01 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.6836 11 211 1.20.950.20
af_Q2FVM4_1_215_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.683 10 215 1.20.950.20
af_O06562_6_220_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.6516 5 212 1.20.950.20
af_Q2FVM4_1_215_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.6363 10 215 1.20.950.20
1siwC01 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.6178 11 211 1.20.950.20
ID Description Score Start End GO Terms
AF-A0A1F3X1Y8-F1-model_v4 Nitrate reductase 0.9709 1 225 GO:0005886
GO:0016491
AF-A0A3B1BBD4-F1-model_v4 Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC) 0.9665 2 228 GO:0005886
GO:0016491
AF-A0A1F3X1Y8-F1-model_v4 Nitrate reductase 0.9625 1 225 GO:0005886
GO:0016491
AF-A0A3B1BBD4-F1-model_v4 Sulfite reduction-associated complex DsrMKJOP protein DsrM (= HmeC) 0.9582 2 228 GO:0005886
GO:0016491
AF-I3CF67-F1-model_v4 Nitrate reductase gamma subunit 0.9532 4 228 GO:0005886
GO:0008940
GO:0009055
GO:0019645
GO:0020037

Map