F247302

General Info

Members Datasets Scaffolds Average Seq Length
165 117 136 328

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2857740372|2857743325
Length 351
Sequence VLGGTAFLSAEIARQAVEAGHDVTCLARGSSTNPPDGVTWVRSDRAAGATAFAEINGRWDEVVDVSRDPVQARVALAVLGPFTAHWTFVSSCSVYADHSIPDAGENAALLEPLPEGQSGTPETYGESKSAIEQMTVAAVGEKAHIVRAGLIGGPGDGTDRYGYWPARFAANTDTVLVPDIPDDATQIIDVRDLAAWILQSAEEGLTGIYNALGEVVRFEDYIAESQRAVGTPAGDGISARDRNSAKDRISAKDRAAQDVIRPDEAWLVEHGVEYWSGPDSLPLWLPAGHDGFQARSNRAARERGMVLRPWQETLVATLEDERARGLDRDRKAGLSRETEQRLVALWQLEQR

Samples

Sample ID Description Type Environment
1 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
2 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
3 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
4 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
5 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
6 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
7 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
8 2883821847 Microlunatus elymi KUDC0627 Isolate Rhizosphere
9 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
10 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
11 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
12 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
13 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
14 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
15 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
16 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
17 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
18 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
19 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
20 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
21 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
22 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
23 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
24 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere
25 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
26 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
27 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
28 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
29 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
30 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
31 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
32 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
33 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
34 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
35 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
36 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
44 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
45 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
54 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
55 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
56 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
57 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
58 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
59 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
60 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
61 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
68 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
69 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
70 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
71 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
72 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
73 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
74 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
75 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
76 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
77 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
78 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
79 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
82 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
85 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
86 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
87 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
91 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
92 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
93 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
94 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
95 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
96 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
97 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
104 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
105 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
106 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
107 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
108 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
109 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.42
Metatranscriptomes 0
Isolates 17.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.64
Nodule 0
Rhizoplane 10.3
Rhizosphere 79.39
Stem 0
Stem Tuber 0
Unclassified 6.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25152J39213_1000287 3300002773 Bacteria 33449
2 JGI25151J46595_10023014 3300003187 Bacteria 2576
3 rootL2_10197918 3300003322 Bacteria 2126
4 Ga0070666_10082501 3300005335 Bacteria 2199
5 Ga0070671_100171580 3300005355 Bacteria 1835
6 Ga0070673_100375367 3300005364 Bacteria 1267
7 Ga0075432_10009510 3300006058 Bacteria 3311
8 Ga0105244_10001898 3300009036 Bacteria 16243
9 Ga0105243_10059686 3300009148 Bacteria 3045
10 Ga0105243_10138271 3300009148 Bacteria 2075
11 Ga0105248_10187242 3300009177 Bacteria 2332
12 Ga0105246_10001188 3300011119 Bacteria 15160
13 Ga0157369_10118408 3300013105 Bacteria 2811
14 Ga0157375_10088455 3300013308 Bacteria 3152
15 Ga0209148_1002181 3300025254 Bacteria 7239
16 Ga0209129_1000129 3300025258 Bacteria 129853
17 Ga0209025_1000279 3300025294 Bacteria 116352
18 Ga0209051_1002347 3300025303 Bacteria 13695
19 Ga0207655_1013244 3300025728 Bacteria 4748
20 Ga0207655_1017241 3300025728 Bacteria 3903
21 Ga0207680_10024890 3300025903 Bacteria 3293
22 Ga0207645_10011369 3300025907 Bacteria 6082
23 Ga0207650_10378168 3300025925 Bacteria 1169
24 Ga0207691_10000576 3300025940 Bacteria 36700
25 Ga0207711_10441150 3300025941 Bacteria 1211
26 Ga0207651_10210161 3300025960 Bacteria 1566
27 Ga0207428_10139648 3300027907 Bacteria 1850
28 Ga0307408_100004238 3300031548 Bacteria 9759
29 Ga0307408_100020862 3300031548 Bacteria 4426
30 Ga0307408_100026238 3300031548 Bacteria 3999
31 Ga0307408_100054425 3300031548 Bacteria 2893
32 Ga0307408_100198748 3300031548 Bacteria 1621
33 Ga0307405_10005033 3300031731 Bacteria 6324
34 Ga0307405_10034272 3300031731 Bacteria 3019
35 Ga0307413_10017541 3300031824 Bacteria 3731
36 Ga0307413_10027096 3300031824 Bacteria 3169
37 Ga0307413_10112566 3300031824 Bacteria 1825
38 Ga0307413_10121580 3300031824 Bacteria 1770
39 Ga0307413_10212241 3300031824 Bacteria 1407
40 Ga0307413_10296531 3300031824 Bacteria 1224
41 Ga0307410_10001378 3300031852 Bacteria 10933
42 Ga0307410_10005324 3300031852 Bacteria 6794
43 Ga0307410_10031369 3300031852 Bacteria 3410
44 Ga0307410_10053035 3300031852 Bacteria 2742
45 Ga0307410_10067806 3300031852 Bacteria 2462
46 Ga0307410_10094013 3300031852 Bacteria 2134
47 Ga0307406_10042287 3300031901 Bacteria 2844
48 Ga0307406_10065484 3300031901 Bacteria 2362
49 Ga0307406_10073535 3300031901 Bacteria 2248
50 Ga0307407_10021567 3300031903 Bacteria 3325
51 Ga0307407_10056592 3300031903 Bacteria 2271
52 Ga0307407_10083481 3300031903 Bacteria 1938
53 Ga0307412_10013455 3300031911 Bacteria 4800
54 Ga0307412_10024715 3300031911 Bacteria 3711
55 Ga0307412_10027335 3300031911 Bacteria 3556
56 Ga0307412_10035631 3300031911 Bacteria 3181
57 Ga0307412_10054115 3300031911 Bacteria 2663
58 Ga0307409_100012575 3300031995 Bacteria 5400
59 Ga0307409_100034341 3300031995 Bacteria 3703
60 Ga0307409_100044709 3300031995 Bacteria 3338
61 Ga0307409_100622446 3300031995 Bacteria 1069
62 Ga0307416_100006971 3300032002 Bacteria 7125
63 Ga0307416_100161352 3300032002 Bacteria 2072
64 Ga0307416_100220947 3300032002 Bacteria 1817
65 Ga0307416_100495061 3300032002 Bacteria 1285
66 Ga0307416_100562978 3300032002 Bacteria 1215
67 Ga0307414_10001424 3300032004 Bacteria 12417
68 Ga0307414_10260077 3300032004 Bacteria 1448
69 Ga0307415_100092928 3300032126 Bacteria 2189
70 Ga0395898_0071103 3300037466 Bacteria 3363
71 Ga0395898_0124972 3300037466 Bacteria 2464
72 Ga0395901_0127342 3300038443 Bacteria 2676
73 Ga0439438_028536 3300041405 Bacteria 1501
74 Ga0439461_0015288 3300041410 Bacteria 1469
75 Ga0439466_0001654 3300041411 Bacteria 8708
76 Ga0439466_0076560 3300041411 Bacteria 1059
77 Ga0439433_0000265 3300041999 Bacteria 8848
78 Ga0439433_0015304 3300041999 Bacteria 1693
79 Ga0439442_000489 3300042002 Bacteria 8982
80 Ga0439442_000645 3300042002 Bacteria 7414
81 Ga0439442_008250 3300042002 Bacteria 2102
82 Ga0439432_048253 3300042006 Bacteria 1334
83 Ga0439449_0004530 3300042007 Bacteria 5368
84 Ga0439449_0091762 3300042007 Bacteria 1121
85 Ga0439457_001587 3300042014 Bacteria 6782
86 Ga0439462_0011856 3300042015 Bacteria 2223
87 Ga0450920_010291 3300042122 Bacteria 1733
88 Ga0450907_000098 3300042146 Bacteria 33569
89 Ga0450907_021582 3300042146 Bacteria 1083
90 Ga0439434_0000611 3300042435 Bacteria 10280
91 Ga0450918_000446 3300042531 Bacteria 8797
92 Ga0495580_0018173 3300046472 Bacteria 5239
93 Ga0495664_0192595 3300046477 Bacteria 1236
94 Ga0495594_0059325 3300046499 Bacteria 2116
95 Ga0495630_0055801 3300046517 Bacteria 2960
96 Ga0495643_0043105 3300046522 Bacteria 2457
97 Ga0495642_0061147 3300046528 Bacteria 1563
98 Ga0495665_0097843 3300046531 Bacteria 1540
99 Ga0495586_0096109 3300046535 Bacteria 1640
100 Ga0495586_0186119 3300046535 Bacteria 1175
101 Ga0495587_0004889 3300046536 Bacteria 8786
102 Ga0495645_0064111 3300046543 Bacteria 2659
103 Ga0495656_0040183 3300046615 Bacteria 1948
104 Ga0495588_0011157 3300046674 Bacteria 4208
105 Ga0495600_0139456 3300046809 Bacteria 1574
106 Ga0495581_0009035 3300047315 Bacteria 5766
107 Ga0495581_0027507 3300047315 Bacteria 3297
108 Ga0495680_0039912 3300047322 Bacteria 3741
109 Ga0495677_0067907 3300047445 Bacteria 1327
110 Ga0495681_0069126 3300047470 Bacteria 1605
111 Ga0495684_0171620 3300047471 Bacteria 1613
112 Ga0496100_0202465 3300048903 Bacteria 1447
113 Ga0496101_0195711 3300048904 Bacteria 1561
114 Ga0496102_0054892 3300048905 Bacteria 3633
115 Ga0496103_0202210 3300048906 Bacteria 1277
116 Ga0496104_0150479 3300048907 Bacteria 2234
117 Ga0496106_0017773 3300048909 Bacteria 5259
118 Ga0496106_0067547 3300048909 Bacteria 2725
119 Ga0496107_0015098 3300048910 Bacteria 5411
120 Ga0496108_0393409 3300048911 Bacteria 1210
121 Ga0496109_0043973 3300048912 Bacteria 4050
122 Ga0496109_0244709 3300048912 Bacteria 1688
123 Ga0496110_0124759 3300048913 Bacteria 2322
124 Ga0496110_0169823 3300048913 Bacteria 1978
125 Ga0496111_0055559 3300048914 Bacteria 2863
126 Ga0496111_0059213 3300048914 Bacteria 2774
127 Ga0496113_0170279 3300048916 Bacteria 1724
128 Ga0496115_0098549 3300048918 Bacteria 2394
129 Ga0501032_0001201 3300049569 Bacteria 20712
130 Ga0501032_0002817 3300049569 Bacteria 13524
131 Ga0501034_0000231 3300049571 Bacteria 104378
132 Ga0501038_0042509 3300049574 Bacteria 3957
133 Ga0501039_0154832 3300049575 Bacteria 1800
134 Ga0501043_0011789 3300049579 Bacteria 6847
135 Ga0501043_0280715 3300049579 Bacteria 1276
136 Ga0501070_0051918 3300049586 Bacteria 3403

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046531 Ga0495665_0097843 Ga0495665_0097843_581_1474 278
2 3300049579 Ga0501043_0011789 Ga0501043_0011789_45_959 281
3 3300041411 Ga0439466_0076560 Ga0439466_0076560_43_903 285
4 3300042015 Ga0439462_0011856 Ga0439462_0011856_107_967 285
5 3300042146 Ga0450907_021582 Ga0450907_021582_184_1044 285
6 3300042435 Ga0439434_0000611 Ga0439434_0000611_9377_10237 285
7 3300003322 rootL2_10197918 rootL2_101979181 306
8 3300041410 Ga0439461_0015288 Ga0439461_0015288_328_1326 307
9 3300041411 Ga0439466_0001654 Ga0439466_0001654_3130_4128 307
10 3300041999 Ga0439433_0000265 Ga0439433_0000265_4454_5452 307
11 3300042002 Ga0439442_008250 Ga0439442_008250_529_1527 307
12 3300042007 Ga0439449_0004530 Ga0439449_0004530_684_1682 307
13 3300042014 Ga0439457_001587 Ga0439457_001587_478_1476 307
14 3300046499 Ga0495594_0059325 Ga0495594_0059325_150_1175 308
15 3300046528 Ga0495642_0061147 Ga0495642_0061147_156_1181 308
16 3300047315 Ga0495581_0027507 Ga0495581_0027507_1226_2251 308
17 3300031548 Ga0307408_100004238 Ga0307408_1000042383 309
18 3300031824 Ga0307413_10027096 Ga0307413_100270964 309
19 3300031852 Ga0307410_10001378 Ga0307410_1000137813 309
20 3300031903 Ga0307407_10083481 Ga0307407_100834812 309
21 3300031911 Ga0307412_10035631 Ga0307412_100356314 309
22 3300031995 Ga0307409_100012575 Ga0307409_1000125758 309
23 3300032002 Ga0307416_100006971 Ga0307416_1000069712 309
24 3300032126 Ga0307415_100092928 Ga0307415_1000929282 309
25 3300009148 Ga0105243_10059686 Ga0105243_100596863 311
26 3300011119 Ga0105246_10001188 Ga0105246_1000118814 311
27 3300037466 Ga0395898_0071103 Ga0395898_0071103_41_1072 312
28 3300031824 Ga0307413_10296531 Ga0307413_102965311 313
29 3300031852 Ga0307410_10067806 Ga0307410_100678062 313
30 3300025941 Ga0207711_10441150 Ga0207711_104411502 315
31 3300031911 Ga0307412_10027335 Ga0307412_100273352 315
32 3300046472 Ga0495580_0018173 Ga0495580_0018173_3527_4495 316
33 3300046522 Ga0495643_0043105 Ga0495643_0043105_610_1635 316
34 3300048907 Ga0496104_0150479 Ga0496104_0150479_889_1914 316
35 3300048909 Ga0496106_0067547 Ga0496106_0067547_12_1037 316
36 3300048911 Ga0496108_0393409 Ga0496108_0393409_167_1192 316
37 3300009036 Ga0105244_10001898 Ga0105244_100018983 317
38 3300025303 Ga0209051_1002347 Ga0209051_10023474 317
39 3300025728 Ga0207655_1017241 Ga0207655_10172413 317
40 3300038443 Ga0395901_0127342 Ga0395901_0127342_755_1753 318
41 3300049569 Ga0501032_0002817 Ga0501032_0002817_2140_3165 318
42 3300049571 Ga0501034_0000231 Ga0501034_0000231_24584_25609 318
43 3300031852 Ga0307410_10094013 Ga0307410_100940132 319
44 3300006058 Ga0075432_10009510 Ga0075432_100095103 322
45 3300027907 Ga0207428_10139648 Ga0207428_101396482 322
46 3300046477 Ga0495664_0192595 Ga0495664_0192595_124_1149 322
47 3300046517 Ga0495630_0055801 Ga0495630_0055801_799_1824 322
48 3300046535 Ga0495586_0186119 Ga0495586_0186119_88_1113 322
49 3300046536 Ga0495587_0004889 Ga0495587_0004889_6337_7362 322
50 3300046543 Ga0495645_0064111 Ga0495645_0064111_182_1207 322
51 3300047322 Ga0495680_0039912 Ga0495680_0039912_881_1906 322
52 3300047471 Ga0495684_0171620 Ga0495684_0171620_532_1557 322
53 3300049569 Ga0501032_0001201 Ga0501032_0001201_11538_12554 322
54 3300049574 Ga0501038_0042509 Ga0501038_0042509_1853_2869 322
55 3300049575 Ga0501039_0154832 Ga0501039_0154832_498_1514 322
56 3300049579 Ga0501043_0280715 Ga0501043_0280715_148_1164 322
57 3300049586 Ga0501070_0051918 Ga0501070_0051918_1485_2501 322
58 iso_pu_bacteria 2946024296 2946026064 322
59 iso_pu_bacteria 8054107350 8054107985 322
60 3300032002 Ga0307416_100562978 Ga0307416_1005629781 324
61 iso_pu_bacteria 2883821847 2883824111 324
62 iso_pu_bacteria 2933418574 2933421897 324
63 iso_pu_bacteria 2690315906 2691514293 325
64 iso_pu_bacteria 2775506735 2775656597 325
65 iso_pu_bacteria 2808606357 2808831534 325
66 iso_pu_bacteria 2808606360 2808852741 325
67 iso_pu_bacteria 2808606370 2808891609 325
68 iso_pu_bacteria 2811994871 2812320852 325
69 iso_pu_bacteria 2857740372 2857743325 325
70 iso_pu_bacteria 2904497146 2904497972 325
71 iso_pu_bacteria 2904776348 2904777326 325
72 iso_pu_bacteria 2910809715 2910812169 325
73 iso_pu_bacteria 2919034639 2919034682 325
74 iso_pu_bacteria 2919059106 2919062341 325
75 iso_pu_bacteria 2919538618 2919540166 325
76 iso_pu_bacteria 2932426870 2932427997 325
77 iso_pu_bacteria 2939598168 2939598342 325
78 iso_pu_bacteria 2939647034 2939648414 325
79 iso_pu_bacteria 2939674588 2939675538 325
80 iso_pu_bacteria 2945916053 2945918603 325
81 iso_pu_bacteria 2945920336 2945921117 325
82 iso_pu_bacteria 2945941187 2945942762 325
83 iso_pu_bacteria 2945956166 2945959422 325
84 iso_pu_bacteria 2946037020 2946038641 325
85 iso_pu_bacteria 2946059875 2946062465 325
86 iso_pu_bacteria 2953998280 2953999930 325
87 iso_pu_bacteria 2974302888 2974306625 325
88 3300031548 Ga0307408_100026238 Ga0307408_1000262385 328
89 3300031824 Ga0307413_10121580 Ga0307413_101215802 328
90 3300031995 Ga0307409_100034341 Ga0307409_1000343411 328
91 3300002773 JGI25152J39213_1000287 JGI25152J39213_100028710 329
92 3300003187 JGI25151J46595_10023014 JGI25151J46595_100230141 329
93 3300005335 Ga0070666_10082501 Ga0070666_100825011 329
94 3300005355 Ga0070671_100171580 Ga0070671_1001715801 329
95 3300005364 Ga0070673_100375367 Ga0070673_1003753671 329
96 3300009148 Ga0105243_10138271 Ga0105243_101382712 329
97 3300009177 Ga0105248_10187242 Ga0105248_101872422 329
98 3300013105 Ga0157369_10118408 Ga0157369_101184084 329
99 3300013308 Ga0157375_10088455 Ga0157375_100884552 329
100 3300025254 Ga0209148_1002181 Ga0209148_10021815 329
101 3300025258 Ga0209129_1000129 Ga0209129_1000129112 329
102 3300025294 Ga0209025_1000279 Ga0209025_100027992 329
103 3300025728 Ga0207655_1013244 Ga0207655_10132443 329
104 3300025903 Ga0207680_10024890 Ga0207680_100248904 329
105 3300025907 Ga0207645_10011369 Ga0207645_100113694 329
106 3300025925 Ga0207650_10378168 Ga0207650_103781681 329
107 3300025940 Ga0207691_10000576 Ga0207691_1000057613 329
108 3300025960 Ga0207651_10210161 Ga0207651_102101612 329
109 3300031548 Ga0307408_100020862 Ga0307408_1000208623 329
110 3300031548 Ga0307408_100054425 Ga0307408_1000544254 329
111 3300031548 Ga0307408_100198748 Ga0307408_1001987481 329
112 3300031731 Ga0307405_10005033 Ga0307405_100050331 329
113 3300031731 Ga0307405_10034272 Ga0307405_100342723 329
114 3300031824 Ga0307413_10017541 Ga0307413_100175414 329
115 3300031824 Ga0307413_10112566 Ga0307413_101125662 329
116 3300031824 Ga0307413_10212241 Ga0307413_102122411 329
117 3300031852 Ga0307410_10005324 Ga0307410_100053243 329
118 3300031852 Ga0307410_10031369 Ga0307410_100313695 329
119 3300031852 Ga0307410_10053035 Ga0307410_100530353 329
120 3300031901 Ga0307406_10042287 Ga0307406_100422873 329
121 3300031901 Ga0307406_10065484 Ga0307406_100654843 329
122 3300031901 Ga0307406_10073535 Ga0307406_100735352 329
123 3300031903 Ga0307407_10021567 Ga0307407_100215673 329
124 3300031903 Ga0307407_10056592 Ga0307407_100565922 329
125 3300031911 Ga0307412_10013455 Ga0307412_100134553 329
126 3300031911 Ga0307412_10024715 Ga0307412_100247153 329
127 3300031911 Ga0307412_10054115 Ga0307412_100541153 329
128 3300031995 Ga0307409_100044709 Ga0307409_1000447093 329
129 3300031995 Ga0307409_100622446 Ga0307409_1006224461 329
130 3300032002 Ga0307416_100161352 Ga0307416_1001613523 329
131 3300032002 Ga0307416_100220947 Ga0307416_1002209472 329
132 3300032002 Ga0307416_100495061 Ga0307416_1004950612 329
133 3300032004 Ga0307414_10001424 Ga0307414_1000142412 329
134 3300032004 Ga0307414_10260077 Ga0307414_102600771 329
135 3300037466 Ga0395898_0124972 Ga0395898_0124972_1179_2177 329
136 3300041405 Ga0439438_028536 Ga0439438_028536_426_1418 329
137 3300041999 Ga0439433_0015304 Ga0439433_0015304_282_1274 329
138 3300042002 Ga0439442_000489 Ga0439442_000489_6371_7378 329
139 3300042002 Ga0439442_000645 Ga0439442_000645_6343_7335 329
140 3300042006 Ga0439432_048253 Ga0439432_048253_103_1095 329
141 3300042007 Ga0439449_0091762 Ga0439449_0091762_77_1069 329
142 3300042122 Ga0450920_010291 Ga0450920_010291_679_1671 329
143 3300042146 Ga0450907_000098 Ga0450907_000098_17931_18923 329
144 3300042531 Ga0450918_000446 Ga0450918_000446_7351_8343 329
145 3300046535 Ga0495586_0096109 Ga0495586_0096109_113_1126 329
146 3300046615 Ga0495656_0040183 Ga0495656_0040183_492_1505 329
147 3300046674 Ga0495588_0011157 Ga0495588_0011157_2714_3727 329
148 3300046809 Ga0495600_0139456 Ga0495600_0139456_514_1527 329
149 3300047315 Ga0495581_0009035 Ga0495581_0009035_3957_4970 329
150 3300047445 Ga0495677_0067907 Ga0495677_0067907_177_1190 329
151 3300047470 Ga0495681_0069126 Ga0495681_0069126_381_1394 329
152 3300048903 Ga0496100_0202465 Ga0496100_0202465_212_1234 329
153 3300048904 Ga0496101_0195711 Ga0496101_0195711_45_1070 329
154 3300048905 Ga0496102_0054892 Ga0496102_0054892_2046_3059 329
155 3300048906 Ga0496103_0202210 Ga0496103_0202210_45_1070 329
156 3300048909 Ga0496106_0017773 Ga0496106_0017773_3023_4045 329
157 3300048910 Ga0496107_0015098 Ga0496107_0015098_3205_4227 329
158 3300048912 Ga0496109_0043973 Ga0496109_0043973_1763_2785 329
159 3300048912 Ga0496109_0244709 Ga0496109_0244709_619_1644 329
160 3300048913 Ga0496110_0124759 Ga0496110_0124759_201_1223 329
161 3300048913 Ga0496110_0169823 Ga0496110_0169823_828_1850 329
162 3300048914 Ga0496111_0055559 Ga0496111_0055559_1439_2461 329
163 3300048914 Ga0496111_0059213 Ga0496111_0059213_1717_2742 329
164 3300048916 Ga0496113_0170279 Ga0496113_0170279_197_1222 329
165 3300048918 Ga0496115_0098549 Ga0496115_0098549_943_1965 329

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

1

211

0.7

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j34-assembly1.cif.gz_A crystal structure of kynurenine 3-monooxygenase - truncated at position 394 plus his tag cleaved. 0.9155 2 30
3ka7-assembly1.cif.gz_A crystal structure of an oxidoreductase from methanosarcina mazei. northeast structural genomics consortium target id mar208 0.8996 1 32
3int-assembly3.cif.gz_B structure of udp-galactopyranose mutase bound to udp-galactose (reduced) 0.8813 2 30
1u7w-assembly2.cif.gz_C-2 phosphopantothenoylcysteine synthetase from e. coli, ctp-complex 0.7786 1 94
4lw8-assembly1.cif.gz_B crystal structure of a putative epimerase from burkholderia cenocepacia j2315 0.7674 2 303
ID Description Score Start End Superfamily
3zdnC01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9173 2 30 3.50.50.60
af_P76113_12_234_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8574 2 34 3.40.50.2300
4j36B00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8479 2 30 3.50.50.60
6b4oA02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8464 2 30 3.50.50.60
af_C0H4M9_5_398_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8458 2 34 3.50.50.60
ID Description Score Start End GO Terms
AF-A9WUY0-F1-model_v4 NAD dependent epimerase/dehydratase 0.9792 149 326
AF-A0A2R7RC12-F1-model_v4 Epimerase 0.9683 164 326
AF-A0A4Q8URL9-F1-model_v4 Epimerase 0.9653 1 329 GO:0004029
GO:0005737
AF-A0A4R4KVC4-F1-model_v4 Oxidoreductase 0.9641 177 327
AF-A0A4R4NWB6-F1-model_v4 Oxidoreductase 0.9581 1 154

Feature Viewer

pLDDT pTM Quality
90.93 0.91 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map