F249369

General Info

Members Datasets Scaffolds Average Seq Length
166 117 332 140

Family's Representative Sequence

Representative Sequence 3300053092|Ga0500583_0000008|Ga0500583_0000008_45949_46386
Length 145
Sequence MASKIFLDANILLDLTLQRTGYVEAKKILQKGIDGDIQLYTTPAVLHIVSYWITKAYSGAIAKNLILTLLADVHVIDCDHATTLMAINSNINDIEDALQYYAALKYNIIYFISSDKKLKKAAIPQLPVYTAKEFLDELDGENTTQ

Samples

Sample ID Description Type Environment
1 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
44 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
63 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
64 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
65 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
66 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
67 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
71 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
72 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
73 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
74 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
75 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
76 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
77 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
78 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
79 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
80 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
81 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
82 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
85 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
86 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
87 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
88 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
89 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
90 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
91 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
92 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
93 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
94 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
99 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
100 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
101 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
102 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
103 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
104 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
105 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
106 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
107 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
108 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
109 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
110 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
111 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
112 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
113 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
114 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
115 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
116 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
117 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.8
Metatranscriptomes 1.2
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.02
Nodule 0
Rhizoplane 0
Rhizosphere 86.14
Stem 0
Stem Tuber 0
Unclassified 10.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500583_0000008 3300053092 Bacteria 161152
2 JGI24737J22298_10002928 3300001990 Bacteria 6050
3 JGI25406J46586_10011979 3300003203 Bacteria 3780
4 rootH1_10102758 3300003316 Bacteria 1172
5 rootH1_10136599 3300003316 Bacteria 1338
6 rootH2_10241643 3300003320 Unclassified 1218
7 rootH2_10330600 3300003320 Bacteria 1858
8 rootL2_10079530 3300003322 Bacteria 2715
9 rootL2_10169782 3300003322 Unclassified 1043
10 rootL2_10300928 3300003322 Bacteria 1030
11 rootH1_10015297 3300003323 Bacteria 4719
12 rootH1_10082538 3300003323 Unclassified 1431
13 rootH1_10096130 3300003323 Bacteria 11202
14 rootH1_10096535 3300003323 Bacteria 2838
15 rootH1_10327246 3300003323 Bacteria 1172
16 Ga0070658_10218587 3300005327 Bacteria 1611
17 Ga0070683_100022713 3300005329 Bacteria 5610
18 Ga0070683_100075908 3300005329 Bacteria 3141
19 Ga0070670_100761784 3300005331 Bacteria 873
20 Ga0070692_10861054 3300005345 Bacteria 623
21 Ga0070675_100882211 3300005354 Bacteria 819
22 Ga0070663_100096477 3300005455 Bacteria 2199
23 Ga0070681_10069840 3300005458 Bacteria 3478
24 Ga0070679_100179272 3300005530 Bacteria 2091
25 Ga0070684_100044648 3300005535 Bacteria 3834
26 Ga0068855_100037672 3300005563 Bacteria 5749
27 Ga0068855_100162259 3300005563 Bacteria 2536
28 Ga0068855_100208668 3300005563 Unclassified 2196
29 Ga0070664_100058083 3300005564 Bacteria 3290
30 Ga0068857_100526982 3300005577 Bacteria 1111
31 Ga0068856_100185609 3300005614 Bacteria 2093
32 Ga0068852_100416690 3300005616 Bacteria 1324
33 Ga0068852_102121152 3300005616 Unclassified 584
34 Ga0068863_100633925 3300005841 Bacteria 1059
35 Ga0068860_100108872 3300005843 Unclassified 2648
36 Ga0081540_1008965 3300005983 Bacteria 6923
37 Ga0081539_10000345 3300005985 Bacteria 102083
38 Ga0075366_10034584 3300006195 Bacteria 2977
39 Ga0105240_10336505 3300009093 Bacteria 1716
40 Ga0105237_10027549 3300009545 Bacteria 5798
41 Ga0105237_10264004 3300009545 Bacteria 1725
42 Ga0105237_10947959 3300009545 Bacteria 867
43 Ga0105238_10588823 3300009551 Unclassified 1119
44 Ga0105239_10000048 3300010375 Bacteria 177855
45 Ga0105246_10447819 3300011119 Bacteria 1084
46 Ga0157373_10001854 3300013100 Bacteria 16054
47 Ga0157373_10008115 3300013100 Bacteria 7805
48 Ga0157371_10003409 3300013102 Bacteria 14436
49 Ga0157371_10054387 3300013102 Unclassified 2843
50 Ga0157370_10102408 3300013104 Bacteria 2681
51 Ga0157370_10163686 3300013104 Bacteria 2069
52 Ga0157370_10176587 3300013104 Bacteria 1985
53 Ga0157370_10292891 3300013104 Bacteria 1503
54 Ga0157370_10563126 3300013104 Bacteria 1044
55 Ga0157369_10039628 3300013105 Bacteria 5148
56 Ga0157369_10202683 3300013105 Bacteria 2082
57 Ga0157369_10227507 3300013105 Bacteria 1951
58 Ga0157369_10634805 3300013105 Bacteria 1102
59 Ga0157374_10000001 3300013296 Bacteria 1077351
60 Ga0157374_10413925 3300013296 Bacteria 1346
61 Ga0157374_10718285 3300013296 Bacteria 1013
62 Ga0157378_10015749 3300013297 Bacteria 6622
63 Ga0163162_10499121 3300013306 Bacteria 1347
64 Ga0163162_11017507 3300013306 Bacteria 937
65 Ga0157372_10000243 3300013307 Bacteria 60266
66 Ga0157372_10002035 3300013307 Bacteria 21994
67 Ga0157372_10004815 3300013307 Bacteria 14349
68 Ga0157372_10027634 3300013307 Bacteria 6182
69 Ga0157372_10095689 3300013307 Bacteria 3384
70 Ga0157372_10396686 3300013307 Bacteria 1608
71 Ga0157372_10520897 3300013307 Bacteria 1386
72 Ga0157372_12622480 3300013307 Bacteria 578
73 Ga0157372_12927247 3300013307 Bacteria 546
74 Ga0157375_10114596 3300013308 Bacteria 2797
75 Ga0157376_10002300 3300014969 Bacteria 12901
76 Ga0206351_10617513 3300020077 Bacteria 1198
77 Ga0209233_1003340 3300025261 Bacteria 5678
78 Ga0207647_10150890 3300025904 Unclassified 1358
79 Ga0207647_10432128 3300025904 Unclassified 739
80 Ga0207705_10012052 3300025909 Bacteria 6245
81 Ga0207707_10010049 3300025912 Bacteria 8208
82 Ga0207695_10238078 3300025913 Bacteria 1722
83 Ga0207671_10022391 3300025914 Bacteria 4779
84 Ga0207660_10018984 3300025917 Bacteria 4592
85 Ga0207657_10550734 3300025919 Bacteria 902
86 Ga0207652_10000055 3300025921 Bacteria 115420
87 Ga0207661_10060471 3300025944 Bacteria 3057
88 Ga0207661_10232409 3300025944 Bacteria 1633
89 Ga0207679_10011639 3300025945 Bacteria 5709
90 Ga0207667_10016480 3300025949 Bacteria 8349
91 Ga0207667_10054321 3300025949 Bacteria 4213
92 Ga0207667_10060959 3300025949 Bacteria 3948
93 Ga0207677_10054358 3300026023 Bacteria 2732
94 Ga0207702_10588291 3300026078 Bacteria 1091
95 Ga0207641_10824909 3300026088 Bacteria 918
96 Ga0207676_10500582 3300026095 Bacteria 1154
97 Ga0207674_10467396 3300026116 Bacteria 1219
98 Ga0207698_10471269 3300026142 Bacteria 1216
99 Ga0268264_10006755 3300028381 Bacteria 9641
100 Ga0316183_1113409 3300030742 Bacteria 24440
101 Ga0316181_1045037 3300030744 Bacteria 24752
102 Ga0265327_10067230 3300031251 Bacteria 1806
103 Ga0307408_100003191 3300031548 Bacteria 11288
104 Ga0307408_100006365 3300031548 Bacteria 7834
105 Ga0307405_10014793 3300031731 Bacteria 4207
106 Ga0307405_10020695 3300031731 Bacteria 3681
107 Ga0307412_10027970 3300031911 Bacteria 3522
108 Ga0307412_11328458 3300031911 Bacteria 648
109 Ga0307416_100061249 3300032002 Bacteria 3070
110 Ga0307414_10291738 3300032004 Bacteria 1375
111 Ga0307414_11414634 3300032004 Unclassified 646
112 Ga0307507_10004880 3300033179 Bacteria 22985
113 Ga0373941_0011116 3300035115 Bacteria 2320
114 Ga0395899_0012888 3300037312 Bacteria 6401
115 Ga0395900_0013581 3300037418 Bacteria 8320
116 Ga0395900_0152884 3300037418 Bacteria 2357
117 Ga0395900_0446756 3300037418 Viruses 1250
118 Ga0395905_0000169 3300037471 Bacteria 106579
119 Ga0395901_0018591 3300038443 Bacteria 7098
120 Ga0395901_0033508 3300038443 Bacteria 5303
121 Ga0395901_0196520 3300038443 Bacteria 2115
122 Ga0439457_173100 3300042014 Bacteria 525
123 Ga0466969_0001132 3300044656 Bacteria 14351
124 Ga0466966_0202829 3300044684 Bacteria 1200
125 Ga0466961_0908511 3300044693 Unclassified 524
126 Ga0466964_0171152 3300044706 Bacteria 1023
127 Ga0466968_0021268 3300044735 Bacteria 2626
128 Ga0466970_0018840 3300044765 Bacteria 3576
129 Ga0466959_0000013 3300045049 Bacteria 157000
130 Ga0466959_0275627 3300045049 Bacteria 1155
131 Ga0466958_0052473 3300045836 Bacteria 2472
132 Ga0495592_0216565 3300046454 Bacteria 1283
133 Ga0495638_0236310 3300046460 Bacteria 1014
134 Ga0495585_0006629 3300046492 Bacteria 7154
135 Ga0495616_0018420 3300046513 Bacteria 3833
136 Ga0495609_0345331 3300046538 Bacteria 601
137 Ga0495625_0003409 3300046660 Bacteria 15897
138 Ga0495625_0005748 3300046660 Bacteria 11212
139 Ga0495677_0247914 3300047445 Bacteria 696
140 Ga0495678_020054 3300049459 Bacteria 2969
141 Ga0495682_0046507 3300049460 Bacteria 1584
142 Ga0501335_019612 3300049551 Bacteria 715
143 Ga0501034_0071695 3300049571 Bacteria 3474
144 Ga0501047_0093956 3300049581 Bacteria 2878
145 Ga0501048_0269905 3300049582 Unclassified 1209
146 Ga0501216_088251 3300049660 Unclassified 666
147 Ga0501223_000588 3300049663 Bacteria 8724
148 Ga0501227_039557 3300049665 Bacteria 1161
149 Ga0501238_021341 3300049671 Bacteria 917
150 Ga0501240_002346 3300049673 Bacteria 1998
151 Ga0501242_022534 3300049674 Bacteria 818
152 Ga0501219_000004 3300049703 Bacteria 38713
153 Ga0501225_0076978 3300049705 Bacteria 954
154 Ga0501080_0356974 3300049742 Bacteria 1319
155 Ga0501241_000814 3300049758 Bacteria 6630
156 Ga0501241_018410 3300049758 Unclassified 1279
157 Ga0501044_0040998 3300049823 Bacteria 4821
158 Ga0501284_00009 3300050005 Bacteria 142855
159 nmdc:mga0k408_6400_c1 3300050493 Bacteria 6282
160 Ga0500578_0315358 3300053086 Unclassified 923
161 Ga0500651_0000543 3300053093 Bacteria 19210
162 Ga0500655_004979 3300053133 Bacteria 2389
163 Ga0500561_0102122 3300053137 Bacteria 860
164 Ga0500568_0052604 3300053139 Bacteria 1598
165 Ga0500616_0015516 3300053153 Unclassified 4354
166 Ga0466962_0012547 3300061719 Bacteria 4075
167 Ga0500583_0000008
168 JGI24737J22298_10002928
169 JGI25406J46586_10011979
170 rootH1_10102758
171 rootH1_10136599
172 rootH2_10241643
173 rootH2_10330600
174 rootL2_10079530
175 rootL2_10169782
176 rootL2_10300928
177 rootH1_10015297
178 rootH1_10082538
179 rootH1_10096130
180 rootH1_10096535
181 rootH1_10327246
182 Ga0070658_10218587
183 Ga0070683_100022713
184 Ga0070683_100075908
185 Ga0070670_100761784
186 Ga0070692_10861054
187 Ga0070675_100882211
188 Ga0070663_100096477
189 Ga0070681_10069840
190 Ga0070679_100179272
191 Ga0070684_100044648
192 Ga0068855_100037672
193 Ga0068855_100162259
194 Ga0068855_100208668
195 Ga0070664_100058083
196 Ga0068857_100526982
197 Ga0068856_100185609
198 Ga0068852_100416690
199 Ga0068852_102121152
200 Ga0068863_100633925
201 Ga0068860_100108872
202 Ga0081540_1008965
203 Ga0081539_10000345
204 Ga0075366_10034584
205 Ga0105240_10336505
206 Ga0105237_10027549
207 Ga0105237_10264004
208 Ga0105237_10947959
209 Ga0105238_10588823
210 Ga0105239_10000048
211 Ga0105246_10447819
212 Ga0157373_10001854
213 Ga0157373_10008115
214 Ga0157371_10003409
215 Ga0157371_10054387
216 Ga0157370_10102408
217 Ga0157370_10163686
218 Ga0157370_10176587
219 Ga0157370_10292891
220 Ga0157370_10563126
221 Ga0157369_10039628
222 Ga0157369_10202683
223 Ga0157369_10227507
224 Ga0157369_10634805
225 Ga0157374_10000001
226 Ga0157374_10413925
227 Ga0157374_10718285
228 Ga0157378_10015749
229 Ga0163162_10499121
230 Ga0163162_11017507
231 Ga0157372_10000243
232 Ga0157372_10002035
233 Ga0157372_10004815
234 Ga0157372_10027634
235 Ga0157372_10095689
236 Ga0157372_10396686
237 Ga0157372_10520897
238 Ga0157372_12622480
239 Ga0157372_12927247
240 Ga0157375_10114596
241 Ga0157376_10002300
242 Ga0206351_10617513
243 Ga0209233_1003340
244 Ga0207647_10150890
245 Ga0207647_10432128
246 Ga0207705_10012052
247 Ga0207707_10010049
248 Ga0207695_10238078
249 Ga0207671_10022391
250 Ga0207660_10018984
251 Ga0207657_10550734
252 Ga0207652_10000055
253 Ga0207661_10060471
254 Ga0207661_10232409
255 Ga0207679_10011639
256 Ga0207667_10016480
257 Ga0207667_10054321
258 Ga0207667_10060959
259 Ga0207677_10054358
260 Ga0207702_10588291
261 Ga0207641_10824909
262 Ga0207676_10500582
263 Ga0207674_10467396
264 Ga0207698_10471269
265 Ga0268264_10006755
266 Ga0316183_1113409
267 Ga0316181_1045037
268 Ga0265327_10067230
269 Ga0307408_100003191
270 Ga0307408_100006365
271 Ga0307405_10014793
272 Ga0307405_10020695
273 Ga0307412_10027970
274 Ga0307412_11328458
275 Ga0307416_100061249
276 Ga0307414_10291738
277 Ga0307414_11414634
278 Ga0307507_10004880
279 Ga0373941_0011116
280 Ga0395899_0012888
281 Ga0395900_0013581
282 Ga0395900_0152884
283 Ga0395900_0446756
284 Ga0395905_0000169
285 Ga0395901_0018591
286 Ga0395901_0033508
287 Ga0395901_0196520
288 Ga0439457_173100
289 Ga0466969_0001132
290 Ga0466966_0202829
291 Ga0466961_0908511
292 Ga0466964_0171152
293 Ga0466968_0021268
294 Ga0466970_0018840
295 Ga0466959_0000013
296 Ga0466959_0275627
297 Ga0466958_0052473
298 Ga0495592_0216565
299 Ga0495638_0236310
300 Ga0495585_0006629
301 Ga0495616_0018420
302 Ga0495609_0345331
303 Ga0495625_0003409
304 Ga0495625_0005748
305 Ga0495677_0247914
306 Ga0495678_020054
307 Ga0495682_0046507
308 Ga0501335_019612
309 Ga0501034_0071695
310 Ga0501047_0093956
311 Ga0501048_0269905
312 Ga0501216_088251
313 Ga0501223_000588
314 Ga0501227_039557
315 Ga0501238_021341
316 Ga0501240_002346
317 Ga0501242_022534
318 Ga0501219_000004
319 Ga0501225_0076978
320 Ga0501080_0356974
321 Ga0501241_000814
322 Ga0501241_018410
323 Ga0501044_0040998
324 Ga0501284_00009
325 nmdc:mga0k408_6400_c1
326 Ga0500578_0315358
327 Ga0500651_0000543
328 Ga0500655_004979
329 Ga0500561_0102122
330 Ga0500568_0052604
331 Ga0500616_0015516
332 Ga0466962_0012547

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13470

PIN_3

PIN domain

4

117

0.95

PF01850

PIN

PIN domain

5

124

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vwo-assembly3.cif.gz_I ta complex from mycobacterium tuberculosis 0.8008 5 131
7by2-assembly1.cif.gz_B-2 toxin-antitoxin complex from klebsiella pneumoniae 0.7825 5 130
5x3t-assembly1.cif.gz_H vapbc from mycobacterium tuberculosis 0.7729 3 124
7by2-assembly1.cif.gz_B-2 toxin-antitoxin complex from klebsiella pneumoniae 0.7651 5 130
4xgq-assembly2.cif.gz_G crystal structure of addiction module from mycobacterial species 0.756 5 119
ID Description Score Start End Superfamily
af_P9WFB3_1_135_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8537 5 131 3.40.50.1010
af_P9WF55_1_133_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.808 5 117 3.40.50.1010
af_O53501_3_137_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.807 7 118 3.40.50.1010
af_P9WF49_1_125_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8058 5 118 3.40.50.1010
af_Q60288_5_153_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8052 5 130 3.40.50.1010
ID Description Score Start End GO Terms
AF-A0A191TJR0-F1-model_v4 PIN domain-containing protein 0.9964 1 138 GO:0016020
AF-A0A2U2PAD9-F1-model_v4 PIN domain-containing protein 0.9868 1 137
AF-A0A1M5FIZ9-F1-model_v4 Predicted nucleic acid-binding protein, contains PIN domain 0.9868 1 137
AF-A0A7G9BN25-F1-model_v4 Type II toxin-antitoxin system VapC family toxin 0.9859 1 137
AF-A0A1G7QNT7-F1-model_v4 PIN domain-containing protein 0.9851 1 137

Map