F250583

General Info

Members Datasets Scaffolds Average Seq Length
167 111 166 230

Family's Representative Sequence

Representative Sequence 3300021361|Ga0213872_10021610|Ga0213872_100216104
Length 262
Sequence MTARTRTITNLREPPRILIYLCAFASLREIFPMFVSEIFHSIQGEGELTGVPTVFVRTSGCNLRCSWCDTKYASWTPEGEEMDIEEIATKVDESACRHVVLTGGEPMVAKGIHQLAARLKELGKHITIETAATILPDGIACDLASLSPKLSNSTPDATVAGAWRDRHEQRRLQPAVIRDWIRNYDYQLKFVVASEKDLEEIHELLSGVDAEIAPAKILLMPEGTDADTIRKRSLPLIDICKHHGYRYCDRLHIHLFGNTRGT

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
54 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
55 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
56 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
57 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
58 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
59 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
60 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
61 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
62 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
63 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
64 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
65 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
66 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
67 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
68 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
69 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
70 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
71 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
74 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
75 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
78 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
79 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
82 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
83 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
84 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
85 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
86 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
87 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
88 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
89 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
94 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
107 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
108 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
109 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.8
Metatranscriptomes 0.6
Isolates 0.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 92.81
Stem 0
Stem Tuber 0
Unclassified 7.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10000303 3300003320 Bacteria 11311
2 rootH2_10092826 3300003320 Bacteria 32546
3 rootL2_10031957 3300003322 Bacteria 1822
4 rootH1_10024725 3300003323 Bacteria 1438
5 rootH1_10135770 3300003323 Bacteria 9307
6 Ga0070658_10194956 3300005327 Bacteria 1708
7 Ga0070683_100020281 3300005329 Bacteria 5915
8 Ga0068869_100000001 3300005334 Bacteria 178472
9 Ga0068868_100003708 3300005338 Bacteria 10672
10 Ga0068868_100047070 3300005338 Bacteria 3378
11 Ga0070691_10222401 3300005341 Bacteria 1001
12 Ga0070692_10340962 3300005345 Bacteria 928
13 Ga0070709_10190234 3300005434 Unclassified 1447
14 Ga0070714_100306332 3300005435 Bacteria 1482
15 Ga0070713_100053615 3300005436 Bacteria 3342
16 Ga0070710_10094398 3300005437 Bacteria 1770
17 Ga0070708_100000647 3300005445 Bacteria 26332
18 Ga0070678_100406231 3300005456 Bacteria 1184
19 Ga0068867_100010382 3300005459 Bacteria 6571
20 Ga0070706_100413615 3300005467 Unclassified 1255
21 Ga0070707_100080644 3300005468 Unclassified 3141
22 Ga0070707_101104222 3300005468 Unclassified 759
23 Ga0070698_100000740 3300005471 Bacteria 35156
24 Ga0070698_100008937 3300005471 Bacteria 10777
25 Ga0070698_100024204 3300005471 Bacteria 6336
26 Ga0070698_100412765 3300005471 Bacteria 1284
27 Ga0070699_100161277 3300005518 Bacteria 1984
28 Ga0070697_100109861 3300005536 Bacteria 2297
29 Ga0070697_100244848 3300005536 Bacteria 1532
30 Ga0068855_100004252 3300005563 Bacteria 17488
31 Ga0068857_100017718 3300005577 Bacteria 6246
32 Ga0068857_100036371 3300005577 Bacteria 4362
33 Ga0068856_100010097 3300005614 Bacteria 9175
34 Ga0068856_100249662 3300005614 Bacteria 1789
35 Ga0068863_100013168 3300005841 Bacteria 7980
36 Ga0070717_10000071 3300006028 Bacteria 84759
37 Ga0070717_10060267 3300006028 Bacteria 3142
38 Ga0097621_100005424 3300006237 Bacteria 8991
39 Ga0068871_100006541 3300006358 Bacteria 8256
40 Ga0068865_100050180 3300006881 Bacteria 2881
41 Ga0105240_10001022 3300009093 Bacteria 49888
42 Ga0157372_10200348 3300013307 Bacteria 2312
43 Ga0213872_10021610 3300021361 Bacteria 2965
44 Ga0213872_10030266 3300021361 Unclassified 2482
45 Ga0213876_10002726 3300021384 Bacteria 10293
46 Ga0213876_10015518 3300021384 Bacteria 4031
47 Ga0224712_10015056 3300022467 Bacteria 2509
48 Ga0207642_10117163 3300025899 Bacteria 1367
49 Ga0207699_10509756 3300025906 Bacteria 869
50 Ga0207705_10010527 3300025909 Bacteria 6726
51 Ga0207684_10047844 3300025910 Unclassified 3627
52 Ga0207684_10095739 3300025910 Unclassified 2533
53 Ga0207695_10000908 3300025913 Bacteria 53344
54 Ga0207652_10062459 3300025921 Bacteria 3219
55 Ga0207646_10050971 3300025922 Bacteria 3704
56 Ga0207704_10215664 3300025938 Bacteria 1416
57 Ga0207689_10000048 3300025942 Bacteria 90313
58 Ga0207661_10038921 3300025944 Bacteria 3730
59 Ga0207667_10010257 3300025949 Bacteria 10967
60 Ga0207677_10026578 3300026023 Bacteria 3633
61 Ga0207677_10039961 3300026023 Bacteria 3089
62 Ga0207702_10000050 3300026078 Bacteria 140110
63 Ga0207641_10416757 3300026088 Bacteria 1292
64 Ga0207648_10017004 3300026089 Bacteria 6629
65 Ga0207674_10003986 3300026116 Bacteria 17947
66 Ga0207674_10329120 3300026116 Bacteria 1477
67 Ga0207683_10443445 3300026121 Bacteria 1196
68 Ga0265337_1016834 3300028556 Bacteria 2356
69 Ga0265319_1000423 3300028563 Bacteria 30438
70 Ga0265319_1019123 3300028563 Bacteria 2565
71 Ga0265319_1036375 3300028563 Bacteria 1684
72 Ga0265319_1097410 3300028563 Archaea 925
73 Ga0265318_10052719 3300028577 Unclassified 1526
74 Ga0265318_10077508 3300028577 Bacteria 1229
75 Ga0265323_10012619 3300028653 Bacteria 3383
76 Ga0265322_10026446 3300028654 Archaea 1659
77 Ga0265336_10003491 3300028666 Bacteria 6151
78 Ga0307515_10161950 3300028794 Bacteria 2277
79 Ga0265330_10007902 3300031235 Bacteria 5154
80 Ga0265330_10008345 3300031235 Bacteria 4988
81 Ga0265332_10102557 3300031238 Archaea 1206
82 Ga0265320_10000552 3300031240 Bacteria 28868
83 Ga0265320_10003140 3300031240 Bacteria 11209
84 Ga0265320_10004359 3300031240 Bacteria 9286
85 Ga0265320_10075783 3300031240 Bacteria 1577
86 Ga0265320_10077804 3300031240 Archaea 1552
87 Ga0265329_10150224 3300031242 Archaea 755
88 Ga0265327_10035510 3300031251 Bacteria 2753
89 Ga0265327_10212939 3300031251 Bacteria 871
90 Ga0265316_10026812 3300031344 Bacteria 4785
91 Ga0265316_10315124 3300031344 Archaea 1137
92 Ga0307509_10401544 3300031507 Bacteria 1077
93 Ga0307408_100000011 3300031548 Bacteria 414737
94 Ga0265313_10013684 3300031595 Bacteria 4847
95 Ga0265314_10038836 3300031711 Bacteria 3436
96 Ga0265342_10009982 3300031712 Bacteria 6635
97 Ga0265342_10030172 3300031712 Bacteria 3362
98 Ga0265342_10265656 3300031712 Bacteria 912
99 Ga0307410_10000003 3300031852 Bacteria 140139
100 Ga0307412_10157854 3300031911 Bacteria 1681
101 Ga0307409_100000072 3300031995 Bacteria 36405
102 Ga0307416_100015091 3300032002 Bacteria 5321
103 Ga0307414_10056468 3300032004 Bacteria 2754
104 Ga0307414_10453116 3300032004 Unclassified 1126
105 Ga0373954_0007813 3300035118 Bacteria 4684
106 Ga0373956_0000244 3300035119 Bacteria 21525
107 Ga0373935_0123566 3300035692 Bacteria 1732
108 Ga0373927_0000042 3300035695 Bacteria 94293
109 Ga0395905_0000026 3300037471 Bacteria 315051
110 Ga0436364_0571146 3300037853 Bacteria 1606
111 Ga0436365_0508539 3300039437 Bacteria 12619
112 Ga0436360_1111747 3300039438 Viruses 4006
113 Ga0436360_1365370 3300039438 Bacteria 3642
114 Ga0436361_0102583 3300039447 Bacteria 8683
115 Ga0436361_0116629 3300039447 Bacteria 2649
116 Ga0436361_0241348 3300039447 Bacteria 3557
117 Ga0436361_0308939 3300039447 Bacteria 8668
118 Ga0436361_0309750 3300039447 Bacteria 3141
119 Ga0436361_1179734 3300039447 Bacteria 1790
120 Ga0436362_0167694 3300039453 Bacteria 828
121 Ga0439442_062529 3300042002 Bacteria 790
122 Ga0451577_0594125 3300042876 Unclassified 1004
123 Ga0453683_0000215 3300044673 Bacteria 76688
124 Ga0466961_0004102 3300044693 Bacteria 9093
125 Ga0453684_0078049 3300044712 Unclassified 4146
126 Ga0453684_0242765 3300044712 Unclassified 2073
127 Ga0453684_0256045 3300044712 Bacteria 2007
128 Ga0466957_0542772 3300044842 Unclassified 810
129 Ga0451576_0000052 3300045051 Bacteria 310414
130 Ga0451576_0000985 3300045051 Bacteria 52711
131 Ga0451576_0064273 3300045051 Bacteria 3823
132 Ga0451576_0244529 3300045051 Bacteria 1875
133 Ga0451576_0366345 3300045051 Bacteria 1509
134 Ga0466967_0069882 3300045976 Unclassified 3140
135 Ga0501031_0004740 3300049568 Bacteria 8827
136 Ga0501032_0002285 3300049569 Bacteria 15057
137 Ga0501032_0017568 3300049569 Bacteria 5021
138 Ga0501032_0150099 3300049569 Bacteria 1533
139 Ga0501033_0001541 3300049570 Bacteria 20374
140 Ga0501033_0003540 3300049570 Bacteria 12774
141 Ga0501034_0478635 3300049571 Bacteria 1160
142 Ga0501037_0008207 3300049573 Bacteria 7654
143 Ga0501038_0241274 3300049574 Bacteria 1435
144 Ga0501039_0011597 3300049575 Bacteria 6711
145 Ga0501042_0006990 3300049578 Bacteria 7367
146 Ga0501043_0027585 3300049579 Bacteria 4457
147 Ga0501046_0009162 3300049580 Bacteria 8574
148 Ga0501046_0196915 3300049580 Bacteria 1500
149 Ga0501047_0020756 3300049581 Bacteria 6310
150 Ga0501047_0038421 3300049581 Bacteria 4631
151 Ga0501047_0071937 3300049581 Bacteria 3328
152 Ga0501047_0150935 3300049581 Bacteria 2200
153 Ga0501048_0011239 3300049582 Bacteria 6675
154 Ga0501048_0679851 3300049582 Bacteria 739
155 Ga0501070_0068529 3300049586 Bacteria 2937
156 Ga0501070_0227495 3300049586 Bacteria 1529
157 Ga0501080_0059692 3300049742 Bacteria 3549
158 Ga0501083_0002342 3300049744 Bacteria 12957
159 Ga0501083_0025084 3300049744 Bacteria 4129
160 Ga0501083_0126521 3300049744 Bacteria 1675
161 Ga0501035_0009941 3300049822 Bacteria 8834
162 Ga0501035_0026856 3300049822 Bacteria 5264
163 Ga0501035_0124928 3300049822 Bacteria 2247
164 Ga0501035_0249595 3300049822 Bacteria 1507
165 Ga0501044_0001526 3300049823 Bacteria 27149
166 Ga0501045_0200166 3300049824 Bacteria 1488

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005445 Ga0070708_100000647 Ga0070708_10000064726 184
2 3300042876 Ga0451577_0594125 Ga0451577_0594125_209_862 208
3 3300044712 Ga0453684_0242765 Ga0453684_0242765_154_807 208
4 3300003320 rootH2_10092826 rootH2_1009282611 215
5 3300005563 Ga0068855_100004252 Ga0068855_10000425218 215
6 3300025949 Ga0207667_10010257 Ga0207667_1001025710 215
7 3300005341 Ga0070691_10222401 Ga0070691_102224012 216
8 3300005345 Ga0070692_10340962 Ga0070692_103409621 216
9 3300005467 Ga0070706_100413615 Ga0070706_1004136151 216
10 3300005468 Ga0070707_100080644 Ga0070707_1000806443 216
11 3300005468 Ga0070707_101104222 Ga0070707_1011042221 216
12 3300005471 Ga0070698_100000740 Ga0070698_10000074032 216
13 3300005471 Ga0070698_100008937 Ga0070698_1000089375 216
14 3300005471 Ga0070698_100024204 Ga0070698_1000242041 216
15 3300005471 Ga0070698_100412765 Ga0070698_1004127652 216
16 3300005518 Ga0070699_100161277 Ga0070699_1001612772 216
17 3300005536 Ga0070697_100109861 Ga0070697_1001098613 216
18 3300005536 Ga0070697_100244848 Ga0070697_1002448483 216
19 3300005577 Ga0068857_100017718 Ga0068857_1000177186 216
20 3300006028 Ga0070717_10060267 Ga0070717_100602674 216
21 3300013307 Ga0157372_10200348 Ga0157372_102003482 216
22 3300022467 Ga0224712_10015056 Ga0224712_100150562 216
23 3300025910 Ga0207684_10047844 Ga0207684_100478445 216
24 3300025910 Ga0207684_10095739 Ga0207684_100957393 216
25 3300025921 Ga0207652_10062459 Ga0207652_100624593 216
26 3300025922 Ga0207646_10050971 Ga0207646_100509712 216
27 3300026116 Ga0207674_10003986 Ga0207674_1000398611 216
28 3300028563 Ga0265319_1097410 Ga0265319_10974102 216
29 3300028577 Ga0265318_10052719 Ga0265318_100527193 216
30 3300028654 Ga0265322_10026446 Ga0265322_100264461 216
31 3300031238 Ga0265332_10102557 Ga0265332_101025572 216
32 3300031240 Ga0265320_10075783 Ga0265320_100757832 216
33 3300031240 Ga0265320_10077804 Ga0265320_100778041 216
34 3300031242 Ga0265329_10150224 Ga0265329_101502241 216
35 3300031712 Ga0265342_10009982 Ga0265342_100099826 216
36 3300035118 Ga0373954_0007813 Ga0373954_0007813_403_1098 216
37 3300035119 Ga0373956_0000244 Ga0373956_0000244_15678_16373 216
38 3300035695 Ga0373927_0000042 Ga0373927_0000042_69908_70603 216
39 iso_pu_bacteria 2786546940 2788436275 226
40 3300021361 Ga0213872_10030266 Ga0213872_100302662 227
41 3300039438 Ga0436360_1111747 Ga0436360_1111747_2652_3335 227
42 3300003320 rootH2_10000303 rootH2_100003035 230
43 3300003322 rootL2_10031957 rootL2_100319572 230
44 3300003323 rootH1_10024725 rootH1_100247251 230
45 3300003323 rootH1_10135770 rootH1_101357706 230
46 3300005327 Ga0070658_10194956 Ga0070658_101949561 230
47 3300005329 Ga0070683_100020281 Ga0070683_1000202812 230
48 3300005334 Ga0068869_100000001 Ga0068869_100000001108 230
49 3300005338 Ga0068868_100003708 Ga0068868_1000037084 230
50 3300005338 Ga0068868_100047070 Ga0068868_1000470703 230
51 3300005434 Ga0070709_10190234 Ga0070709_101902341 230
52 3300005435 Ga0070714_100306332 Ga0070714_1003063322 230
53 3300005436 Ga0070713_100053615 Ga0070713_1000536154 230
54 3300005437 Ga0070710_10094398 Ga0070710_100943982 230
55 3300005456 Ga0070678_100406231 Ga0070678_1004062311 230
56 3300005459 Ga0068867_100010382 Ga0068867_1000103823 230
57 3300005577 Ga0068857_100036371 Ga0068857_1000363714 230
58 3300005614 Ga0068856_100010097 Ga0068856_1000100978 230
59 3300005614 Ga0068856_100249662 Ga0068856_1002496623 230
60 3300005841 Ga0068863_100013168 Ga0068863_1000131689 230
61 3300006028 Ga0070717_10000071 Ga0070717_1000007163 230
62 3300006237 Ga0097621_100005424 Ga0097621_1000054247 230
63 3300006358 Ga0068871_100006541 Ga0068871_1000065413 230
64 3300006881 Ga0068865_100050180 Ga0068865_1000501802 230
65 3300009093 Ga0105240_10001022 Ga0105240_1000102230 230
66 3300021361 Ga0213872_10021610 Ga0213872_100216104 230
67 3300021384 Ga0213876_10002726 Ga0213876_1000272610 230
68 3300021384 Ga0213876_10015518 Ga0213876_100155182 230
69 3300025899 Ga0207642_10117163 Ga0207642_101171632 230
70 3300025906 Ga0207699_10509756 Ga0207699_105097561 230
71 3300025909 Ga0207705_10010527 Ga0207705_100105275 230
72 3300025913 Ga0207695_10000908 Ga0207695_100009086 230
73 3300025938 Ga0207704_10215664 Ga0207704_102156642 230
74 3300025942 Ga0207689_10000048 Ga0207689_1000004870 230
75 3300025944 Ga0207661_10038921 Ga0207661_100389213 230
76 3300026023 Ga0207677_10026578 Ga0207677_100265782 230
77 3300026023 Ga0207677_10039961 Ga0207677_100399612 230
78 3300026078 Ga0207702_10000050 Ga0207702_10000050100 230
79 3300026088 Ga0207641_10416757 Ga0207641_104167572 230
80 3300026089 Ga0207648_10017004 Ga0207648_100170045 230
81 3300026116 Ga0207674_10329120 Ga0207674_103291201 230
82 3300026121 Ga0207683_10443445 Ga0207683_104434452 230
83 3300028556 Ga0265337_1016834 Ga0265337_10168344 230
84 3300028563 Ga0265319_1000423 Ga0265319_100042314 230
85 3300028563 Ga0265319_1019123 Ga0265319_10191232 230
86 3300028563 Ga0265319_1036375 Ga0265319_10363752 230
87 3300028577 Ga0265318_10077508 Ga0265318_100775082 230
88 3300028653 Ga0265323_10012619 Ga0265323_100126194 230
89 3300028666 Ga0265336_10003491 Ga0265336_100034911 230
90 3300028794 Ga0307515_10161950 Ga0307515_101619502 230
91 3300031235 Ga0265330_10007902 Ga0265330_100079024 230
92 3300031235 Ga0265330_10008345 Ga0265330_100083454 230
93 3300031240 Ga0265320_10000552 Ga0265320_1000055212 230
94 3300031240 Ga0265320_10003140 Ga0265320_100031408 230
95 3300031240 Ga0265320_10004359 Ga0265320_100043594 230
96 3300031251 Ga0265327_10035510 Ga0265327_100355103 230
97 3300031251 Ga0265327_10212939 Ga0265327_102129391 230
98 3300031344 Ga0265316_10026812 Ga0265316_100268125 230
99 3300031344 Ga0265316_10315124 Ga0265316_103151241 230
100 3300031507 Ga0307509_10401544 Ga0307509_104015442 230
101 3300031548 Ga0307408_100000011 Ga0307408_100000011328 230
102 3300031595 Ga0265313_10013684 Ga0265313_100136843 230
103 3300031711 Ga0265314_10038836 Ga0265314_100388363 230
104 3300031712 Ga0265342_10030172 Ga0265342_100301722 230
105 3300031712 Ga0265342_10265656 Ga0265342_102656561 230
106 3300031852 Ga0307410_10000003 Ga0307410_1000000321 230
107 3300031911 Ga0307412_10157854 Ga0307412_101578542 230
108 3300031995 Ga0307409_100000072 Ga0307409_10000007211 230
109 3300032002 Ga0307416_100015091 Ga0307416_1000150913 230
110 3300032004 Ga0307414_10056468 Ga0307414_100564684 230
111 3300032004 Ga0307414_10453116 Ga0307414_104531162 230
112 3300035692 Ga0373935_0123566 Ga0373935_0123566_169_864 230
113 3300037471 Ga0395905_0000026 Ga0395905_0000026_166647_167339 230
114 3300037853 Ga0436364_0571146 Ga0436364_0571146_466_1158 230
115 3300039437 Ga0436365_0508539 Ga0436365_0508539_8528_9220 230
116 3300039438 Ga0436360_1365370 Ga0436360_1365370_1476_2168 230
117 3300039447 Ga0436361_0102583 Ga0436361_0102583_7158_7850 230
118 3300039447 Ga0436361_0116629 Ga0436361_0116629_425_1117 230
119 3300039447 Ga0436361_0241348 Ga0436361_0241348_2259_2951 230
120 3300039447 Ga0436361_0308939 Ga0436361_0308939_1540_2232 230
121 3300039447 Ga0436361_0309750 Ga0436361_0309750_326_1018 230
122 3300039447 Ga0436361_1179734 Ga0436361_1179734_157_849 230
123 3300039453 Ga0436362_0167694 Ga0436362_0167694_39_731 230
124 3300042002 Ga0439442_062529 Ga0439442_062529_58_750 230
125 3300044673 Ga0453683_0000215 Ga0453683_0000215_58189_58881 230
126 3300044693 Ga0466961_0004102 Ga0466961_0004102_2419_3114 230
127 3300044712 Ga0453684_0078049 Ga0453684_0078049_1718_2413 230
128 3300044712 Ga0453684_0256045 Ga0453684_0256045_960_1652 230
129 3300044842 Ga0466957_0542772 Ga0466957_0542772_36_731 230
130 3300045051 Ga0451576_0000052 Ga0451576_0000052_266736_267428 230
131 3300045051 Ga0451576_0000985 Ga0451576_0000985_19410_20102 230
132 3300045051 Ga0451576_0064273 Ga0451576_0064273_853_1548 230
133 3300045051 Ga0451576_0244529 Ga0451576_0244529_890_1585 230
134 3300045051 Ga0451576_0366345 Ga0451576_0366345_744_1439 230
135 3300045976 Ga0466967_0069882 Ga0466967_0069882_2280_2972 230
136 3300049568 Ga0501031_0004740 Ga0501031_0004740_4290_4982 230
137 3300049569 Ga0501032_0002285 Ga0501032_0002285_7400_8092 230
138 3300049569 Ga0501032_0017568 Ga0501032_0017568_699_1436 230
139 3300049569 Ga0501032_0150099 Ga0501032_0150099_473_1168 230
140 3300049570 Ga0501033_0001541 Ga0501033_0001541_8480_9175 230
141 3300049570 Ga0501033_0003540 Ga0501033_0003540_5623_6315 230
142 3300049571 Ga0501034_0478635 Ga0501034_0478635_15_707 230
143 3300049573 Ga0501037_0008207 Ga0501037_0008207_5992_6729 230
144 3300049574 Ga0501038_0241274 Ga0501038_0241274_326_1063 230
145 3300049575 Ga0501039_0011597 Ga0501039_0011597_6006_6698 230
146 3300049578 Ga0501042_0006990 Ga0501042_0006990_91_783 230
147 3300049579 Ga0501043_0027585 Ga0501043_0027585_1828_2520 230
148 3300049580 Ga0501046_0009162 Ga0501046_0009162_4974_5711 230
149 3300049580 Ga0501046_0196915 Ga0501046_0196915_370_1065 230
150 3300049581 Ga0501047_0020756 Ga0501047_0020756_2207_2902 230
151 3300049581 Ga0501047_0038421 Ga0501047_0038421_2112_2804 230
152 3300049581 Ga0501047_0071937 Ga0501047_0071937_2557_3252 230
153 3300049581 Ga0501047_0150935 Ga0501047_0150935_366_1061 230
154 3300049582 Ga0501048_0011239 Ga0501048_0011239_1606_2298 230
155 3300049582 Ga0501048_0679851 Ga0501048_0679851_17_712 230
156 3300049586 Ga0501070_0068529 Ga0501070_0068529_1566_2258 230
157 3300049586 Ga0501070_0227495 Ga0501070_0227495_351_1046 230
158 3300049742 Ga0501080_0059692 Ga0501080_0059692_930_1625 230
159 3300049744 Ga0501083_0002342 Ga0501083_0002342_5252_5947 230
160 3300049744 Ga0501083_0025084 Ga0501083_0025084_2490_3185 230
161 3300049744 Ga0501083_0126521 Ga0501083_0126521_596_1288 230
162 3300049822 Ga0501035_0009941 Ga0501035_0009941_4672_5367 230
163 3300049822 Ga0501035_0026856 Ga0501035_0026856_2259_2951 230
164 3300049822 Ga0501035_0124928 Ga0501035_0124928_752_1447 230
165 3300049822 Ga0501035_0249595 Ga0501035_0249595_148_843 230
166 3300049823 Ga0501044_0001526 Ga0501044_0001526_19406_20101 230
167 3300049824 Ga0501045_0200166 Ga0501045_0200166_74_766 230

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

55

227

0.93

PF13353

Fer4_12

4Fe-4S single cluster domain

42

174

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
5th5-assembly1.cif.gz_A crystal structure of quee from bacillus subtilis with 6-carboxypterin-5'-deoxyadenosyl ester bound 0.7543 1 230
6nhl-assembly1.cif.gz_A crystal structure of quee from escherichia coli 0.7524 2 218
5th5-assembly1.cif.gz_A crystal structure of quee from bacillus subtilis with 6-carboxypterin-5'-deoxyadenosyl ester bound 0.7514 1 230
5tgs-assembly1.cif.gz_A crystal structure of quee from bacillus subtilis with methionine bound 0.734 1 224
5tgs-assembly1.cif.gz_B crystal structure of quee from bacillus subtilis with methionine bound 0.7322 1 226
ID Description Score Start End Superfamily
af_Q2G1X7_4_231_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7442 1 224 3.20.20.70
af_Q2G1X7_4_231_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7296 1 224 3.20.20.70
af_P64554_2_223_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.728 2 223 3.20.20.70
af_Q59026_29_239_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7122 3 189 3.20.20.70
af_P64554_2_223_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.71 2 223 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A847YEX4-F1-model_v4 7-carboxy-7-deazaguanine synthase QueE 0.9539 2 174 GO:0016829
GO:0046872
GO:0051539
AF-A0A535BFI6-F1-model_v4 7-carboxy-7-deazaguanine synthase QueE 0.9466 1 155 GO:0016829
GO:0046872
GO:0051539
AF-A0A7Z9L820-F1-model_v4 7-carboxy-7-deazaguanine synthase QueE 0.9463 1 193 GO:0016829
GO:0046872
GO:0051539
AF-A0A7Y2AHE2-F1-model_v4 7-carboxy-7-deazaguanine synthase QueE 0.9463 17 197 GO:0016829
GO:0046872
GO:0051539
AF-A0A0M2UV84-F1-model_v4 Radical SAM core domain-containing protein 0.9456 1 102 GO:0003824
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
92.37 0.89 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map