F251065

General Info

Members Datasets Scaffolds Average Seq Length
167 120 334 308

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0074843|Ga0453684_0074843_2948_4009
Length 353
Sequence MKGGSQEAALRIPRHAFLLLALRAWTGHFQGVPKLRIVFMGTPDLACASLRALANCPDFEVVGVVTQPDRPKGRDLKLLPPPVKVLALELGLPVLQPEKARHESFVAELRAFAPDLIAVAAFGQILPSSILDLPPHGCLNVHTSLLPRYRGAAPIQWAILNDDQETGVTIMKMDVGLDTGAVVAMESTPIAESDTSQTLHDRLAELGAALLTRTIPGYVGGTIKPVAQSADGVVYAHKIKKQDGLIDWTQPARHIWNRVRGLIPWPGAFTHLPPDPKSTSTRQPHLLKIWQAEVGTASGAPGEILSADKSGIVVACGSGSLRILQLQREGGKRLPPGDFLAGHPLPAGHQFGS

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
15 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
19 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
20 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
21 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
25 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
26 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
27 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
28 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
29 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
30 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
38 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
39 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
40 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
41 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
42 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
45 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
46 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
47 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
48 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
51 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
52 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
53 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
54 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
55 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
56 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
57 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
58 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
59 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
60 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
61 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
63 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
64 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
65 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
66 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
67 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
68 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
69 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
70 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
71 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
72 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
74 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
75 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
76 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
77 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
78 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
79 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
80 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
83 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
84 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
85 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
86 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
89 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
90 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
105 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
108 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
109 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
110 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
111 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
112 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
113 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
114 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
115 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
116 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
117 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
118 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
119 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
120 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.8
Metatranscriptomes 0.6
Isolates 0.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.4
Nodule 0
Rhizoplane 1.2
Rhizosphere 86.83
Stem 0
Stem Tuber 0
Unclassified 7.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0074843 3300044712 Unclassified 4261
2 rootH2_10029980 3300003320 Bacteria 3454
3 rootL2_10300566 3300003322 Bacteria 1700
4 rootL2_10305197 3300003322 Bacteria 2179
5 rootH1_10154891 3300003323 Bacteria 2498
6 Ga0070682_100240504 3300005337 Bacteria 1299
7 Ga0070689_100122288 3300005340 Unclassified 2080
8 Ga0070714_100021880 3300005435 Bacteria 5236
9 Ga0070711_100104413 3300005439 Bacteria 2067
10 Ga0070706_100232506 3300005467 Bacteria 1721
11 Ga0068855_100000854 3300005563 Bacteria 37817
12 Ga0068856_100432671 3300005614 Bacteria 1336
13 Ga0081455_10151527 3300005937 Bacteria 1787
14 Ga0070717_10170575 3300006028 Bacteria 1892
15 Ga0075364_10285304 3300006051 Unclassified 1123
16 Ga0068871_100123570 3300006358 Bacteria 2189
17 Ga0075430_100010345 3300006846 Bacteria 7899
18 Ga0075431_100003107 3300006847 Bacteria 16076
19 Ga0075429_100070192 3300006880 Bacteria 3050
20 Ga0075429_100134787 3300006880 Bacteria 2161
21 Ga0068865_100118801 3300006881 Bacteria 1962
22 Ga0075436_100015819 3300006914 Bacteria 5165
23 Ga0075435_100002126 3300007076 Bacteria 13046
24 Ga0111539_10331735 3300009094 Bacteria 1771
25 Ga0114129_10206669 3300009147 Bacteria 2656
26 Ga0105239_10296775 3300010375 Bacteria 1820
27 Ga0157373_10001725 3300013100 Bacteria 16609
28 Ga0157373_10004265 3300013100 Bacteria 10768
29 Ga0157370_10002832 3300013104 Bacteria 20736
30 Ga0157370_10044468 3300013104 Bacteria 4268
31 Ga0157380_10067630 3300014326 Bacteria 2878
32 Ga0157376_10342614 3300014969 Bacteria 1428
33 Ga0183365_10005 3300015684 Bacteria 249619
34 Ga0207664_10025862 3300025929 Bacteria 4428
35 Ga0207690_10009826 3300025932 Bacteria 5685
36 Ga0207706_10055959 3300025933 Unclassified 3478
37 Ga0207670_10315522 3300025936 Bacteria 1229
38 Ga0207689_10165210 3300025942 Bacteria 1824
39 Ga0207667_10026197 3300025949 Bacteria 6374
40 Ga0207702_10210407 3300026078 Bacteria 1808
41 Ga0207428_10045370 3300027907 Bacteria 3541
42 Ga0265337_1000127 3300028556 Bacteria 38567
43 Ga0265337_1012765 3300028556 Bacteria 2843
44 Ga0265334_10028011 3300028573 Bacteria 2266
45 Ga0265318_10005910 3300028577 Bacteria 5689
46 Ga0265323_10000159 3300028653 Bacteria 40075
47 Ga0265323_10002600 3300028653 Bacteria 8187
48 Ga0265336_10016636 3300028666 Bacteria 2404
49 Ga0265338_10025722 3300028800 Bacteria 5963
50 Ga0265338_10071054 3300028800 Bacteria 2981
51 Ga0265338_10090481 3300028800 Bacteria 2532
52 Ga0265330_10001562 3300031235 Bacteria 13149
53 Ga0265330_10035444 3300031235 Bacteria 2226
54 Ga0265332_10000772 3300031238 Bacteria 19710
55 Ga0265328_10000007 3300031239 Bacteria 224310
56 Ga0265328_10017603 3300031239 Bacteria 2766
57 Ga0265340_10000750 3300031247 Bacteria 18436
58 Ga0265340_10019729 3300031247 Bacteria 3470
59 Ga0265327_10005318 3300031251 Bacteria 10790
60 Ga0265316_10010886 3300031344 Bacteria 8258
61 Ga0265316_10109225 3300031344 Bacteria 2096
62 Ga0307513_10000077 3300031456 Bacteria 134167
63 Ga0307408_100098490 3300031548 Bacteria 2223
64 Ga0316575_10020626 3300031665 Bacteria 2529
65 Ga0316579_10033351 3300031691 Unclassified 2364
66 Ga0316579_10040708 3300031691 Bacteria 2155
67 Ga0265314_10001689 3300031711 Bacteria 24021
68 Ga0316578_10007797 3300031728 Bacteria 5403
69 Ga0316578_10021407 3300031728 Bacteria 3588
70 Ga0316578_10100297 3300031728 Bacteria 1735
71 Ga0316577_10012758 3300031733 Bacteria 4582
72 Ga0307413_10120745 3300031824 Bacteria 1775
73 Ga0307411_10051441 3300032005 Bacteria 2688
74 Ga0316583_10000215 3300032133 Bacteria 15326
75 Ga0316585_10000994 3300032137 Bacteria 7316
76 Ga0316593_10000035 3300032168 Bacteria 14394
77 Ga0373944_0000081 3300035089 Bacteria 16516
78 Ga0373949_0000684 3300035090 Bacteria 11036
79 Ga0373951_0008605 3300035091 Bacteria 2300
80 Ga0373932_0000003 3300035112 Bacteria 459351
81 Ga0373962_0000093 3300035242 Bacteria 19352
82 Ga0316574_0013371 3300035398 Bacteria 4717
83 Ga0373931_0000017 3300035691 Bacteria 207733
84 Ga0373927_0024942 3300035695 Bacteria 3909
85 Ga0373927_0059867 3300035695 Bacteria 2463
86 Ga0316582_0010364 3300036647 Bacteria 5101
87 Ga0316582_0023531 3300036647 Bacteria 3673
88 Ga0316582_0272428 3300036647 Bacteria 1161
89 Ga0316584_0108433 3300036712 Bacteria 2077
90 Ga0316584_0138766 3300036712 Bacteria 1814
91 Ga0316584_0187847 3300036712 Bacteria 1528
92 Ga0373925_0001468 3300037068 Bacteria 20314
93 Ga0395905_0000156 3300037471 Bacteria 112215
94 Ga0395905_0259049 3300037471 Unclassified 1624
95 Ga0395905_0489911 3300037471 Unclassified 1129
96 Ga0436364_0132834 3300037853 Bacteria 2766
97 Ga0436364_0389359 3300037853 Bacteria 1903
98 Ga0400484_22926 3300038725 Bacteria 5509
99 Ga0400490_31505 3300038726 Bacteria 5069
100 Ga0400488_20928 3300038741 Unclassified 1310
101 Ga0400486_32026 3300038742 Bacteria 1377
102 Ga0400483_046191 3300039062 Bacteria 1407
103 Ga0400489_15069 3300039093 Bacteria 5818
104 Ga0400489_46790 3300039093 Bacteria 1512
105 Ga0451577_0087152 3300042876 Bacteria 2785
106 Ga0466969_0009308 3300044656 Bacteria 5207
107 Ga0466966_0000762 3300044684 Bacteria 20435
108 Ga0453684_0019356 3300044712 Bacteria 10368
109 Ga0466971_0005399 3300044719 Bacteria 5544
110 Ga0466970_0030411 3300044765 Bacteria 2847
111 Ga0466957_0031156 3300044842 Bacteria 3186
112 Ga0466959_0004048 3300045049 Bacteria 9749
113 Ga0466959_0028676 3300045049 Bacteria 4127
114 Ga0451576_0000006 3300045051 Bacteria 949698
115 Ga0451576_0000320 3300045051 Bacteria 116612
116 Ga0451576_0001458 3300045051 Bacteria 40210
117 Ga0451576_0050529 3300045051 Unclassified 4360
118 Ga0451576_0127470 3300045051 Bacteria 2652
119 Ga0451576_0138353 3300045051 Bacteria 2540
120 Ga0466958_0001116 3300045836 Bacteria 12377
121 Ga0495613_0004913 3300046689 Bacteria 10050
122 Ga0496108_0023659 3300048911 Bacteria 5056
123 Ga0496109_0037627 3300048912 Bacteria 4372
124 Ga0501031_0000004 3300049568 Bacteria 202781
125 Ga0501031_0000452 3300049568 Bacteria 23757
126 Ga0501032_0000672 3300049569 Bacteria 27779
127 Ga0501032_0012683 3300049569 Bacteria 6010
128 Ga0501032_0046072 3300049569 Bacteria 2947
129 Ga0501033_0000030 3300049570 Bacteria 157953
130 Ga0501033_0000212 3300049570 Bacteria 55695
131 Ga0501033_0099393 3300049570 Bacteria 2125
132 Ga0501033_0228411 3300049570 Bacteria 1323
133 Ga0501034_0000167 3300049571 Bacteria 122702
134 Ga0501034_0039345 3300049571 Bacteria 4790
135 Ga0501036_0016152 3300049572 Bacteria 6238
136 Ga0501037_0002599 3300049573 Bacteria 13036
137 Ga0501038_0002231 3300049574 Bacteria 18013
138 Ga0501038_0047131 3300049574 Bacteria 3734
139 Ga0501039_0000291 3300049575 Bacteria 35584
140 Ga0501039_0212323 3300049575 Bacteria 1522
141 Ga0501043_0000413 3300049579 Bacteria 38424
142 Ga0501047_0212945 3300049581 Unclassified 1790
143 Ga0501048_0086389 3300049582 Bacteria 2213
144 Ga0501048_0105269 3300049582 Unclassified 1991
145 Ga0501069_0060980 3300049585 Bacteria 2106
146 Ga0501035_0001896 3300049822 Bacteria 21033
147 Ga0501035_0002904 3300049822 Bacteria 16500
148 Ga0501035_0004974 3300049822 Bacteria 12600
149 Ga0501044_0000024 3300049823 Bacteria 194302
150 Ga0501044_0000525 3300049823 Bacteria 46720
151 Ga0501044_0145408 3300049823 Bacteria 2357
152 Ga0501045_0000007 3300049824 Bacteria 79663
153 nmdc:mga00v17_258526_c1 3300050491 Unclassified 1129
154 nmdc:mga05p37_186143_c1 3300050507 Bacteria 2524
155 nmdc:mga09592_362609_c1 3300050508 Bacteria 1254
156 nmdc:mga09592_97783_c1 3300050508 Bacteria 2512
157 nmdc:mga0qj67_2309_c1 3300050509 Bacteria 13554
158 nmdc:mga06r32_106881_c1 3300050510 Bacteria 2750
159 nmdc:mga08y16_13305_c1 3300050511 Bacteria 8653
160 nmdc:mga0rr50_440416_c1 3300050513 Bacteria 1104
161 nmdc:mga08x19_160607_c1 3300050514 Unclassified 1526
162 nmdc:mga08x19_20102_c2 3300050514 Bacteria 3788
163 Ga0500556_0001963 3300053104 Bacteria 7258
164 Ga0500608_000199 3300053122 Bacteria 23889
165 Ga0501082_0243887 3300060353 Bacteria 1564
166 Ga0466962_0000823 3300061719 Bacteria 13945
167 2739792044 2739367756 Bacteria 4553612
168 Ga0453684_0074843
169 rootH2_10029980
170 rootL2_10300566
171 rootL2_10305197
172 rootH1_10154891
173 Ga0070682_100240504
174 Ga0070689_100122288
175 Ga0070714_100021880
176 Ga0070711_100104413
177 Ga0070706_100232506
178 Ga0068855_100000854
179 Ga0068856_100432671
180 Ga0081455_10151527
181 Ga0070717_10170575
182 Ga0075364_10285304
183 Ga0068871_100123570
184 Ga0075430_100010345
185 Ga0075431_100003107
186 Ga0075429_100070192
187 Ga0075429_100134787
188 Ga0068865_100118801
189 Ga0075436_100015819
190 Ga0075435_100002126
191 Ga0111539_10331735
192 Ga0114129_10206669
193 Ga0105239_10296775
194 Ga0157373_10001725
195 Ga0157373_10004265
196 Ga0157370_10002832
197 Ga0157370_10044468
198 Ga0157380_10067630
199 Ga0157376_10342614
200 Ga0183365_10005
201 Ga0207664_10025862
202 Ga0207690_10009826
203 Ga0207706_10055959
204 Ga0207670_10315522
205 Ga0207689_10165210
206 Ga0207667_10026197
207 Ga0207702_10210407
208 Ga0207428_10045370
209 Ga0265337_1000127
210 Ga0265337_1012765
211 Ga0265334_10028011
212 Ga0265318_10005910
213 Ga0265323_10000159
214 Ga0265323_10002600
215 Ga0265336_10016636
216 Ga0265338_10025722
217 Ga0265338_10071054
218 Ga0265338_10090481
219 Ga0265330_10001562
220 Ga0265330_10035444
221 Ga0265332_10000772
222 Ga0265328_10000007
223 Ga0265328_10017603
224 Ga0265340_10000750
225 Ga0265340_10019729
226 Ga0265327_10005318
227 Ga0265316_10010886
228 Ga0265316_10109225
229 Ga0307513_10000077
230 Ga0307408_100098490
231 Ga0316575_10020626
232 Ga0316579_10033351
233 Ga0316579_10040708
234 Ga0265314_10001689
235 Ga0316578_10007797
236 Ga0316578_10021407
237 Ga0316578_10100297
238 Ga0316577_10012758
239 Ga0307413_10120745
240 Ga0307411_10051441
241 Ga0316583_10000215
242 Ga0316585_10000994
243 Ga0316593_10000035
244 Ga0373944_0000081
245 Ga0373949_0000684
246 Ga0373951_0008605
247 Ga0373932_0000003
248 Ga0373962_0000093
249 Ga0316574_0013371
250 Ga0373931_0000017
251 Ga0373927_0024942
252 Ga0373927_0059867
253 Ga0316582_0010364
254 Ga0316582_0023531
255 Ga0316582_0272428
256 Ga0316584_0108433
257 Ga0316584_0138766
258 Ga0316584_0187847
259 Ga0373925_0001468
260 Ga0395905_0000156
261 Ga0395905_0259049
262 Ga0395905_0489911
263 Ga0436364_0132834
264 Ga0436364_0389359
265 Ga0400484_22926
266 Ga0400490_31505
267 Ga0400488_20928
268 Ga0400486_32026
269 Ga0400483_046191
270 Ga0400489_15069
271 Ga0400489_46790
272 Ga0451577_0087152
273 Ga0466969_0009308
274 Ga0466966_0000762
275 Ga0453684_0019356
276 Ga0466971_0005399
277 Ga0466970_0030411
278 Ga0466957_0031156
279 Ga0466959_0004048
280 Ga0466959_0028676
281 Ga0451576_0000006
282 Ga0451576_0000320
283 Ga0451576_0001458
284 Ga0451576_0050529
285 Ga0451576_0127470
286 Ga0451576_0138353
287 Ga0466958_0001116
288 Ga0495613_0004913
289 Ga0496108_0023659
290 Ga0496109_0037627
291 Ga0501031_0000004
292 Ga0501031_0000452
293 Ga0501032_0000672
294 Ga0501032_0012683
295 Ga0501032_0046072
296 Ga0501033_0000030
297 Ga0501033_0000212
298 Ga0501033_0099393
299 Ga0501033_0228411
300 Ga0501034_0000167
301 Ga0501034_0039345
302 Ga0501036_0016152
303 Ga0501037_0002599
304 Ga0501038_0002231
305 Ga0501038_0047131
306 Ga0501039_0000291
307 Ga0501039_0212323
308 Ga0501043_0000413
309 Ga0501047_0212945
310 Ga0501048_0086389
311 Ga0501048_0105269
312 Ga0501069_0060980
313 Ga0501035_0001896
314 Ga0501035_0002904
315 Ga0501035_0004974
316 Ga0501044_0000024
317 Ga0501044_0000525
318 Ga0501044_0145408
319 Ga0501045_0000007
320 nmdc:mga00v17_258526_c1
321 nmdc:mga05p37_186143_c1
322 nmdc:mga09592_362609_c1
323 nmdc:mga09592_97783_c1
324 nmdc:mga0qj67_2309_c1
325 nmdc:mga06r32_106881_c1
326 nmdc:mga08y16_13305_c1
327 nmdc:mga0rr50_440416_c1
328 nmdc:mga08x19_160607_c1
329 nmdc:mga08x19_20102_c2
330 Ga0500556_0001963
331 Ga0500608_000199
332 Ga0501082_0243887
333 Ga0466962_0000823
334 2739792044

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00551

Formyl_trans_N

Formyl transferase

35

215

0.93

PF02911

Formyl_trans_C

Formyl transferase, C-terminal domain

238

344

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4iqf-assembly2.cif.gz_B crystal structure of methyionyl-trna formyltransferase from bacillus anthracis 0.945 1 309
5uai-assembly1.cif.gz_A crystal structure of methionyl-trna formyltransferase from pseudomonas aeruginosa 0.9403 2 310
3tqq-assembly1.cif.gz_A structure of the methionyl-trna formyltransferase (fmt) from coxiella burnetii 0.9392 2 310
4iqf-assembly2.cif.gz_B crystal structure of methyionyl-trna formyltransferase from bacillus anthracis 0.9391 1 309
3q0i-assembly1.cif.gz_A methionyl-trna formyltransferase from vibrio cholerae 0.9286 1 310
ID Description Score Start End Superfamily
3tqqA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9756 2 204 3.40.50.170
af_B4FRN6_28_246_3.40.50.170 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9675 2 204 3.40.50.170
3rfoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9639 2 204 3.40.50.170
3tqqA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9607 2 204 3.40.50.170
3rfoA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Formyl transferase, N-terminal domain 0.9408 2 204 3.40.50.170
ID Description Score Start End GO Terms
AF-A0A7U9WVT5-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9886 1 117 GO:0004479
GO:0005829
AF-A0A3A8LUR5-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9866 26 191 GO:0004479
GO:0005829
AF-A0A258BH43-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.985 1 127 GO:0004479
GO:0005829
AF-A0A2V7K666-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.984 1 124 GO:0004479
GO:0005829
AF-A0A3M1ABA1-F1-model_v4 methionyl-tRNA formyltransferase (EC 2.1.2.9) 0.9808 1 205 GO:0004479
GO:0005829

Map