F251891
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 168 | 147 | 134 | 1047 |
Family's Representative Sequence
| Representative Sequence | 3300005330|Ga0070690_100002958|Ga0070690_1000029582 |
| Length | 1127 |
| Sequence | MTVHGVLLMRGATLARMIHQSGELPARSAPDRVRTRIGKRATIRGHDMPAKLLIANRGEVAVRVAQAAAELAIPTVAIYSDDDAHALHVRRATAAVALGGAGAPAYLDGPRIIAIARDTGCDAIHPGYGFLSEHAGFARACLAAGLTFVGPRPEVLELFGDKARARRFAADCHAPILPGTQHATSLGEAHEILRALGAGGAIMVKGVRAVTSPAALDEAYARCRSEAQAAFGLADVYVERWLPRARHIEVQIAGDGKHGVALFERECTLQRRHQKLVELAPTPSLPGELRAAIVGAACRMAEASSYDSLGTFEFLVELDPAGAPIAFFFIEANPRLQVEHTVTEEVLGQDLVQIQLALAGGRSLAELGLADGVPPPTGYALQLRINMETMDARGVASPAAGTLTAFELPFGAGIRVDTFGYPGYQTSTAFDSLLAKLIVHTRSRDFADVVRKAEAALAQFRIEGVATNLAFLQALLRHPDVIANRVTTRFVEDHAAELVASAAAMVPAGLPGAAPTPARPPNTVAIVAPMQGKVVGISVGDAEHVRPGQAVAVVEAMKMEVVVTADDGGIVRAIAAAPGDIVMAGEPLVFLEPAEIAADAARAETAADAEAIRADLAEVRARHAIGLDPARPAAVARRHDTGRQTARENVAALVDPGSFTEYGALALAAQRRRRGLADLIEATPADGLVTGIATVNRELFGPEATRCMVAAYDYTVLAGTQGYMNHKKLDRMLALALERRLPFVLFAEGGGGRPGDTDAFGIGLDVPTFAQFARLSGLVPVVGIAAGRCFAGNAALLGCCDVIIATEDSSIGMGGPAMIEGGGLGRCAPDDVGPARVQAPNGVIDVLVASEAQAAAAARQYLSYFQGTTPTWDCCDQRLLRRAIPENRMRVYDVRAVIRDLADTGSVLELRAAFGAGIITALVRVEGRPLGVIANNPHHLGGAIDAPAADKAARFVQLCDAHDVPILALCDTPGFMVGPQAETTALVRHTSRMFVTAASLTVPYLTIVLRKAYGLGAIAMAGGDFHGCVFTIAWPTGEFGSMGLEGAVKLGYRKELEAIADPAERAAYYDKMVARYYEEGKAINAASYVEIDEVIDPAQTRRWIIAGLGTRPPGPRPERKRPCVDPW |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2522572158 | Azospirillum halopraeferens DSM 3675 | Isolate | Unclassified |
| 2 | 2547132424 | Nocardia nova SH22a | Isolate | Unclassified |
| 3 | 2596583598 | Ralstonia sp. UNCCL144 | Isolate | Unclassified |
| 4 | 2599185178 | Ralstonia sp. NFACC01 | Isolate | Rhizoplane |
| 5 | 2606217733 | Pseudomonas aeruginosa NFHH01 | Isolate | Rhizoplane |
| 6 | 2643221585 | Pelomonas sp. Root662 | Isolate | Unclassified |
| 7 | 2643221656 | Pelomonas sp. Root405 | Isolate | Unclassified |
| 8 | 2738541337 | Pelomonas sp. BT06 | Isolate | Unclassified |
| 9 | 2738543020 | Pseudomonas sp. GV054 | Isolate | Unclassified |
| 10 | 2738543021 | Pseudomonas sp. GV071 | Isolate | Unclassified |
| 11 | 2744054611 | Aldersonia kunmingensis DSM 45001 | Isolate | Rhizosphere |
| 12 | 2811994881 | Pseudomonas sp. SLBN-26 | Isolate | Unclassified |
| 13 | 2824600985 | Bradyrhizobium sp.HAMBI 2135 | Isolate | Unclassified |
| 14 | 2824609381 | Bradyrhizobium sp. HAMBI 2134 | Isolate | Unclassified |
| 15 | 2824653114 | Bradyrhizobium sp. HAMBI 2142 | Isolate | Unclassified |
| 16 | 2841957949 | Bradyrhizobium sp. CIR1 | Isolate | Nodule |
| 17 | 2842805378 | Pseudomonas sp. R-72599 | Isolate | Unclassified |
| 18 | 2857710386 | Brevibacterium sp. R-73093 | Isolate | Unclassified |
| 19 | 2862574272 | Streptomyces sp. AcE210 | Isolate | Nodule |
| 20 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 21 | 2874628541 | Bradyrhizobium betae Opo-243 | Isolate | Unclassified |
| 22 | 2885266251 | Ralstonia sp. SET104 | Isolate | Nodule |
| 23 | 2888419890 | Bradyrhizobium sp. 1(2017) 63S1MB | Isolate | Unclassified |
| 24 | 2900577576 | Ralstonia sp. TCR112 | Isolate | Rhizosphere |
| 25 | 2923519811 | Pseudomonas otitidis SLBN-103 | Isolate | Rhizosphere |
| 26 | 2928058823 | Ralstonia sp. 1138 | Isolate | Unclassified |
| 27 | 2941531003 | Bradyrhizobium sp. LB11.1 | Isolate | Nodule |
| 28 | 2990196909 | Pseudomonas mangrovi TC-11 | Isolate | Unclassified |
| 29 | 2995392953 | Martelella limonii NBRC 109441 | Isolate | Unclassified |
| 30 | 3001889506 | Janibacter sp. YIM B02568 | Isolate | Unclassified |
| 31 | 3002998708 | Actinomadura barringtoniae GKU 128 | Isolate | Unclassified |
| 32 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 33 | 3300003323 | Sugarcane root Sample H1 | Metagenome | Unclassified |
| 34 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 35 | 3300003758 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 | Metagenome | Endosphere |
| 36 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 37 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 38 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 39 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 40 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 42 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 43 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 44 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 45 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 46 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 47 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 48 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 49 | 3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300015261 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG | Metagenome | Rhizosphere |
| 57 | 3300025224 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025225 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025228 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025229 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 65 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 67 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 68 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 69 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 70 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 71 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 72 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 90 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 91 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 92 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 93 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 94 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 95 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 96 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 97 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 98 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 99 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 100 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 101 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 102 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 103 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 104 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 105 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 106 | 3300039062 | Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 | Metagenome | Unclassified |
| 107 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 108 | 3300042010 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 | Metagenome | Rhizosphere |
| 109 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 110 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 111 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 112 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 113 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 114 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 115 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 116 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 117 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 118 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 119 | 3300046455 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046558 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 128 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 129 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 130 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 131 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 134 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 135 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 136 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 137 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 139 | 3300053095 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere | Metagenome | Endosphere |
| 140 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 141 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
| 142 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 143 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 144 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 145 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 146 | 8016630954 | Bradyrhizobium sp. F1.13.1 | Isolate | Nodule |
| 147 | 8054472261 | Pseudonocardia terrae RS11V-5 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 79.76 |
| Metatranscriptomes | 0 |
| Isolates | 20.24 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 19.64 |
| Nodule | 2.98 |
| Rhizoplane | 1.79 |
| Rhizosphere | 55.95 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 19.64 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10000458 | 3300001979 | Bacteria | 17461 |
| 2 | JGI24740J21852_10000572 | 3300001979 | Bacteria | 15812 |
| 3 | rootH1_10031172 | 3300003323 | Bacteria | 9702 |
| 4 | Ga0055539_1000110 | 3300003752 | Bacteria | 90594 |
| 5 | Ga0055532_1000028 | 3300003758 | Bacteria | 234512 |
| 6 | Ga0055525_1000162 | 3300003759 | Bacteria | 87273 |
| 7 | Ga0055535_1000022 | 3300003761 | Bacteria | 234512 |
| 8 | Ga0055529_1000063 | 3300003763 | Bacteria | 181573 |
| 9 | Ga0055531_10000001 | 3300003794 | Bacteria | 543586 |
| 10 | Ga0070658_10000664 | 3300005327 | Bacteria | 29735 |
| 11 | Ga0070690_100002958 | 3300005330 | Bacteria | 9184 |
| 12 | Ga0070661_100000127 | 3300005344 | Bacteria | 63148 |
| 13 | Ga0070661_100000819 | 3300005344 | Bacteria | 22359 |
| 14 | Ga0070710_10000271 | 3300005437 | Bacteria | 24519 |
| 15 | Ga0070663_100000005 | 3300005455 | Bacteria | 251758 |
| 16 | Ga0070664_100000001 | 3300005564 | Bacteria | 551832 |
| 17 | Ga0068856_100000231 | 3300005614 | Bacteria | 60650 |
| 18 | Ga0068858_100001606 | 3300005842 | Bacteria | 23071 |
| 19 | Ga0068858_100002093 | 3300005842 | Bacteria | 20270 |
| 20 | Ga0081455_10000102 | 3300005937 | Bacteria | 93385 |
| 21 | Ga0105251_10005981 | 3300009011 | Bacteria | 7851 |
| 22 | Ga0111539_10006883 | 3300009094 | Bacteria | 14605 |
| 23 | Ga0111539_10048037 | 3300009094 | Bacteria | 5098 |
| 24 | Ga0105248_10003249 | 3300009177 | Bacteria | 18025 |
| 25 | Ga0157370_10000021 | 3300013104 | Bacteria | 166168 |
| 26 | Ga0157370_10000199 | 3300013104 | Bacteria | 75511 |
| 27 | Ga0157369_10004490 | 3300013105 | Bacteria | 16446 |
| 28 | Ga0157372_10000136 | 3300013307 | Bacteria | 81136 |
| 29 | Ga0157379_10022861 | 3300014968 | Bacteria | 5541 |
| 30 | Ga0182006_1001779 | 3300015261 | Bacteria | 12449 |
| 31 | Ga0182006_1002680 | 3300015261 | Bacteria | 9587 |
| 32 | Ga0209784_100014 | 3300025224 | Bacteria | 496182 |
| 33 | Ga0209784_100724 | 3300025224 | Bacteria | 8597 |
| 34 | Ga0209566_100011 | 3300025225 | Bacteria | 496182 |
| 35 | Ga0209566_100976 | 3300025225 | Bacteria | 12644 |
| 36 | Ga0209674_100032 | 3300025226 | Bacteria | 426888 |
| 37 | Ga0209674_100178 | 3300025226 | Bacteria | 77795 |
| 38 | Ga0209674_101285 | 3300025226 | Bacteria | 6998 |
| 39 | Ga0209672_100410 | 3300025228 | Bacteria | 25374 |
| 40 | Ga0209147_100002 | 3300025229 | Bacteria | 2158988 |
| 41 | Ga0209563_100029 | 3300025230 | Bacteria | 496182 |
| 42 | Ga0209258_100002 | 3300025242 | Bacteria | 2158988 |
| 43 | Ga0209646_1000058 | 3300025246 | Bacteria | 259999 |
| 44 | Ga0209677_100042 | 3300025253 | Bacteria | 225037 |
| 45 | Ga0209148_1000043 | 3300025254 | Bacteria | 461531 |
| 46 | Ga0209148_1001931 | 3300025254 | Bacteria | 8431 |
| 47 | Ga0209455_1000009 | 3300025272 | Bacteria | 1042273 |
| 48 | Ga0209675_1002112 | 3300025291 | Bacteria | 10533 |
| 49 | Ga0209675_1003501 | 3300025291 | Bacteria | 7424 |
| 50 | Ga0209025_1001344 | 3300025294 | Bacteria | 33173 |
| 51 | Ga0209564_1000297 | 3300025295 | Bacteria | 100091 |
| 52 | Ga0209758_1015156 | 3300025297 | Bacteria | 4019 |
| 53 | Ga0209257_1000033 | 3300025304 | Bacteria | 671006 |
| 54 | Ga0207692_10000110 | 3300025898 | Bacteria | 24396 |
| 55 | Ga0207710_10000079 | 3300025900 | Bacteria | 140820 |
| 56 | Ga0207705_10000603 | 3300025909 | Bacteria | 30106 |
| 57 | Ga0207695_10002175 | 3300025913 | Bacteria | 29641 |
| 58 | Ga0207649_10000185 | 3300025920 | Bacteria | 51071 |
| 59 | Ga0207690_10001358 | 3300025932 | Bacteria | 15357 |
| 60 | Ga0207711_10013769 | 3300025941 | Bacteria | 6714 |
| 61 | Ga0207689_10001736 | 3300025942 | Bacteria | 20587 |
| 62 | Ga0207679_10000003 | 3300025945 | Bacteria | 597553 |
| 63 | Ga0207640_10000045 | 3300025981 | Bacteria | 100696 |
| 64 | Ga0207703_10001301 | 3300026035 | Bacteria | 23085 |
| 65 | Ga0207703_10001773 | 3300026035 | Bacteria | 19268 |
| 66 | Ga0207678_10000002 | 3300026067 | Bacteria | 371723 |
| 67 | Ga0207678_10019320 | 3300026067 | Bacteria | 5985 |
| 68 | Ga0207702_10001227 | 3300026078 | Bacteria | 25928 |
| 69 | Ga0207648_10038008 | 3300026089 | Bacteria | 4237 |
| 70 | Ga0207674_10023133 | 3300026116 | Bacteria | 6663 |
| 71 | Ga0207675_100002917 | 3300026118 | Bacteria | 16822 |
| 72 | Ga0207428_10019431 | 3300027907 | Bacteria | 5793 |
| 73 | Ga0307515_10016644 | 3300028794 | Bacteria | 13446 |
| 74 | Ga0265331_10000011 | 3300031250 | Bacteria | 308171 |
| 75 | Ga0265331_10002000 | 3300031250 | Bacteria | 14202 |
| 76 | Ga0265327_10000007 | 3300031251 | Bacteria | 678515 |
| 77 | Ga0307513_10004844 | 3300031456 | Bacteria | 17866 |
| 78 | Ga0307509_10000011 | 3300031507 | Bacteria | 298257 |
| 79 | Ga0307514_10023516 | 3300031649 | Bacteria | 4999 |
| 80 | Ga0265314_10006240 | 3300031711 | Bacteria | 10586 |
| 81 | Ga0307516_10000030 | 3300031730 | Bacteria | 159694 |
| 82 | Ga0373936_0000002 | 3300035113 | Bacteria | 452874 |
| 83 | Ga0373954_0005178 | 3300035118 | Bacteria | 5631 |
| 84 | Ga0373956_0001672 | 3300035119 | Bacteria | 9132 |
| 85 | Ga0373961_0000014 | 3300035241 | Bacteria | 111529 |
| 86 | Ga0373927_0001871 | 3300035695 | Bacteria | 15569 |
| 87 | Ga0395899_0004453 | 3300037312 | Bacteria | 10925 |
| 88 | Ga0395900_0006281 | 3300037418 | Bacteria | 12398 |
| 89 | Ga0395900_0010035 | 3300037418 | Bacteria | 9689 |
| 90 | Ga0395905_0005669 | 3300037471 | Bacteria | 12700 |
| 91 | Ga0400483_254075 | 3300039062 | Bacteria | 11697 |
| 92 | Ga0439432_003426 | 3300042006 | Bacteria | 5887 |
| 93 | Ga0439452_001841 | 3300042010 | Bacteria | 8209 |
| 94 | Ga0439434_0001908 | 3300042435 | Bacteria | 6050 |
| 95 | Ga0466969_0015669 | 3300044656 | Bacteria | 3972 |
| 96 | Ga0466972_0002373 | 3300044658 | Bacteria | 9287 |
| 97 | Ga0466972_0003002 | 3300044658 | Bacteria | 8362 |
| 98 | Ga0466972_0003196 | 3300044658 | Bacteria | 8133 |
| 99 | Ga0466965_0000506 | 3300044683 | Bacteria | 13888 |
| 100 | Ga0466961_0000163 | 3300044693 | Bacteria | 45084 |
| 101 | Ga0466963_0006684 | 3300044694 | Bacteria | 6850 |
| 102 | Ga0466970_0002378 | 3300044765 | Bacteria | 9093 |
| 103 | Ga0466957_0014876 | 3300044842 | Bacteria | 4537 |
| 104 | Ga0466959_0001079 | 3300045049 | Bacteria | 16310 |
| 105 | Ga0466967_0027935 | 3300045976 | Bacteria | 4702 |
| 106 | Ga0495603_0011345 | 3300046455 | Bacteria | 5395 |
| 107 | Ga0495606_0000271 | 3300046507 | Bacteria | 90916 |
| 108 | Ga0495643_0000175 | 3300046522 | Bacteria | 102200 |
| 109 | Ga0495643_0002450 | 3300046522 | Bacteria | 14685 |
| 110 | Ga0495648_0000414 | 3300046524 | Bacteria | 47090 |
| 111 | Ga0495597_0000748 | 3300046542 | Bacteria | 25709 |
| 112 | Ga0495633_0001588 | 3300046558 | Bacteria | 17288 |
| 113 | Ga0495625_0026394 | 3300046660 | Bacteria | 4390 |
| 114 | Ga0495649_0000186 | 3300046694 | Bacteria | 54356 |
| 115 | Ga0496110_0014941 | 3300048913 | Bacteria | 6454 |
| 116 | Ga0496120_0001355 | 3300048923 | Bacteria | 30072 |
| 117 | Ga0496121_0033561 | 3300048924 | Bacteria | 4641 |
| 118 | Ga0496126_0034090 | 3300048929 | Bacteria | 4785 |
| 119 | Ga0501031_0024358 | 3300049568 | Bacteria | 3945 |
| 120 | Ga0501032_0005559 | 3300049569 | Bacteria | 9350 |
| 121 | Ga0501034_0000336 | 3300049571 | Bacteria | 81926 |
| 122 | Ga0501036_0002660 | 3300049572 | Bacteria | 14098 |
| 123 | Ga0501047_0030004 | 3300049581 | Bacteria | 5243 |
| 124 | Ga0501047_0090365 | 3300049581 | Bacteria | 2939 |
| 125 | Ga0501080_0005762 | 3300049742 | Bacteria | 11079 |
| 126 | Ga0501035_0018003 | 3300049822 | Bacteria | 6513 |
| 127 | nmdc:mga08y16_2854_c1 | 3300050511 | Bacteria | 17771 |
| 128 | Ga0500640_000022 | 3300053095 | Bacteria | 22800 |
| 129 | Ga0500595_000065 | 3300053119 | Bacteria | 74208 |
| 130 | Ga0500614_000284 | 3300053123 | Bacteria | 13159 |
| 131 | Ga0500559_0003428 | 3300053136 | Bacteria | 7802 |
| 132 | Ga0500637_0000094 | 3300053178 | Bacteria | 31819 |
| 133 | Ga0500645_005360 | 3300053730 | Bacteria | 4739 |
| 134 | Ga0501084_0002365 | 3300054114 | Bacteria | 15173 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300044842 | Ga0466957_0014876 | Ga0466957_0014876_1751_4504 | 826 |
| 2 | 3300049581 | Ga0501047_0090365 | Ga0501047_0090365_16_2862 | 861 |
| 3 | 3300049568 | Ga0501031_0024358 | Ga0501031_0024358_32_2857 | 863 |
| 4 | 3300049822 | Ga0501035_0018003 | Ga0501035_0018003_47_2872 | 863 |
| 5 | 3300048913 | Ga0496110_0014941 | Ga0496110_0014941_38_3013 | 874 |
| 6 | 3300053730 | Ga0500645_005360 | Ga0500645_005360_1742_4720 | 901 |
| 7 | 3300005437 | Ga0070710_10000271 | Ga0070710_100002711 | 907 |
| 8 | 3300025898 | Ga0207692_10000110 | Ga0207692_100001104 | 907 |
| 9 | 3300044658 | Ga0466972_0002373 | Ga0466972_0002373_5851_8862 | 907 |
| 10 | 3300044683 | Ga0466965_0000506 | Ga0466965_0000506_2525_5536 | 907 |
| 11 | 3300009094 | Ga0111539_10006883 | Ga0111539_100068835 | 918 |
| 12 | 3300027907 | Ga0207428_10019431 | Ga0207428_100194313 | 918 |
| 13 | 3300050511 | nmdc:mga08y16_2854_c1 | nmdc:mga08y16_2854_c1_3306_6572 | 918 |
| 14 | 3300003323 | rootH1_10031172 | rootH1_100311726 | 922 |
| 15 | 3300031250 | Ga0265331_10000011 | Ga0265331_10000011131 | 933 |
| 16 | 3300031711 | Ga0265314_10006240 | Ga0265314_100062402 | 933 |
| 17 | 3300053095 | Ga0500640_000022 | Ga0500640_000022_3770_7123 | 943 |
| 18 | 3300053119 | Ga0500595_000065 | Ga0500595_000065_47433_50786 | 943 |
| 19 | 3300053123 | Ga0500614_000284 | Ga0500614_000284_9319_12672 | 943 |
| 20 | 3300053136 | Ga0500559_0003428 | Ga0500559_0003428_1313_4666 | 943 |
| 21 | 3300031649 | Ga0307514_10023516 | Ga0307514_100235162 | 949 |
| 22 | 3300037471 | Ga0395905_0005669 | Ga0395905_0005669_57_3233 | 949 |
| 23 | 3300035241 | Ga0373961_0000014 | Ga0373961_0000014_18426_21713 | 952 |
| 24 | iso_pu_bacteria | 2857710386 | 2857712262 | 961 |
| 25 | 3300031507 | Ga0307509_10000011 | Ga0307509_10000011163 | 966 |
| 26 | iso_pu_bacteria | 2866552031 | 2866552076 | 967 |
| 27 | iso_pu_bacteria | 2547132424 | 2548696276 | 970 |
| 28 | iso_pu_bacteria | 2738541337 | 2739056213 | 970 |
| 29 | iso_pu_bacteria | 3001889506 | 3001890549 | 970 |
| 30 | 3300003794 | Ga0055531_10000001 | Ga0055531_10000001197 | 971 |
| 31 | 3300025304 | Ga0209257_1000033 | Ga0209257_1000033284 | 971 |
| 32 | 3300028794 | Ga0307515_10016644 | Ga0307515_100166444 | 971 |
| 33 | 3300005327 | Ga0070658_10000664 | Ga0070658_1000066423 | 972 |
| 34 | 3300025909 | Ga0207705_10000603 | Ga0207705_100006033 | 972 |
| 35 | 3300048929 | Ga0496126_0034090 | Ga0496126_0034090_651_3995 | 972 |
| 36 | 3300031456 | Ga0307513_10004844 | Ga0307513_1000484414 | 975 |
| 37 | 3300013105 | Ga0157369_10004490 | Ga0157369_1000449011 | 977 |
| 38 | iso_pu_bacteria | 2744054611 | 2744958679 | 977 |
| 39 | iso_pu_bacteria | 8054472261 | 8054472610 | 977 |
| 40 | iso_pu_bacteria | 3002998708 | 3003006487 | 979 |
| 41 | 3300046542 | Ga0495597_0000748 | Ga0495597_0000748_3851_7147 | 980 |
| 42 | 3300049742 | Ga0501080_0005762 | Ga0501080_0005762_5130_8408 | 980 |
| 43 | iso_pu_bacteria | 2643221585 | 2643932648 | 980 |
| 44 | iso_pu_bacteria | 2643221656 | 2644313898 | 980 |
| 45 | 3300025291 | Ga0209675_1002112 | Ga0209675_10021123 | 984 |
| 46 | 3300044658 | Ga0466972_0003002 | Ga0466972_0003002_103_3312 | 984 |
| 47 | 3300049572 | Ga0501036_0002660 | Ga0501036_0002660_5227_8475 | 984 |
| 48 | 3300005842 | Ga0068858_100001606 | Ga0068858_10000160620 | 985 |
| 49 | 3300009011 | Ga0105251_10005981 | Ga0105251_100059815 | 985 |
| 50 | 3300009177 | Ga0105248_10003249 | Ga0105248_100032499 | 985 |
| 51 | 3300014968 | Ga0157379_10022861 | Ga0157379_100228615 | 985 |
| 52 | 3300025900 | Ga0207710_10000079 | Ga0207710_10000079122 | 985 |
| 53 | 3300025941 | Ga0207711_10013769 | Ga0207711_100137696 | 985 |
| 54 | 3300026035 | Ga0207703_10001301 | Ga0207703_100013015 | 985 |
| 55 | 3300048923 | Ga0496120_0001355 | Ga0496120_0001355_11101_14331 | 985 |
| 56 | 3300048924 | Ga0496121_0033561 | Ga0496121_0033561_1348_4578 | 985 |
| 57 | 3300049581 | Ga0501047_0030004 | Ga0501047_0030004_953_4165 | 985 |
| 58 | 3300031730 | Ga0307516_10000030 | Ga0307516_1000003062 | 986 |
| 59 | 3300046558 | Ga0495633_0001588 | Ga0495633_0001588_13500_16781 | 986 |
| 60 | 3300049569 | Ga0501032_0005559 | Ga0501032_0005559_4905_8174 | 986 |
| 61 | 3300025942 | Ga0207689_10001736 | Ga0207689_1000173615 | 988 |
| 62 | 3300026089 | Ga0207648_10038008 | Ga0207648_100380082 | 988 |
| 63 | 3300026118 | Ga0207675_100002917 | Ga0207675_10000291713 | 988 |
| 64 | 3300049571 | Ga0501034_0000336 | Ga0501034_0000336_1457_4783 | 991 |
| 65 | 3300005937 | Ga0081455_10000102 | Ga0081455_1000010213 | 992 |
| 66 | iso_pu_bacteria | 8054472261 | 8054476992 | 992 |
| 67 | 3300035113 | Ga0373936_0000002 | Ga0373936_0000002_219721_223011 | 994 |
| 68 | 3300037418 | Ga0395900_0010035 | Ga0395900_0010035_4095_7394 | 994 |
| 69 | iso_pu_bacteria | 2862574272 | 2862580597 | 995 |
| 70 | 3300046522 | Ga0495643_0002450 | Ga0495643_0002450_8883_12164 | 996 |
| 71 | 3300046455 | Ga0495603_0011345 | Ga0495603_0011345_173_3505 | 997 |
| 72 | 3300046507 | Ga0495606_0000271 | Ga0495606_0000271_41049_44330 | 998 |
| 73 | 3300046694 | Ga0495649_0000186 | Ga0495649_0000186_50045_53326 | 998 |
| 74 | 3300005330 | Ga0070690_100002958 | Ga0070690_1000029582 | 1000 |
| 75 | 3300026067 | Ga0207678_10019320 | Ga0207678_100193203 | 1001 |
| 76 | 3300037312 | Ga0395899_0004453 | Ga0395899_0004453_4443_7763 | 1001 |
| 77 | 3300045976 | Ga0466967_0027935 | Ga0466967_0027935_742_4014 | 1001 |
| 78 | 3300046522 | Ga0495643_0000175 | Ga0495643_0000175_56044_59325 | 1004 |
| 79 | 3300046660 | Ga0495625_0026394 | Ga0495625_0026394_184_3465 | 1004 |
| 80 | 3300025294 | Ga0209025_1001344 | Ga0209025_100134416 | 1005 |
| 81 | 3300053178 | Ga0500637_0000094 | Ga0500637_0000094_305_3631 | 1005 |
| 82 | 3300003758 | Ga0055532_1000028 | Ga0055532_100002896 | 1006 |
| 83 | 3300003761 | Ga0055535_1000022 | Ga0055535_100002296 | 1006 |
| 84 | 3300003763 | Ga0055529_1000063 | Ga0055529_100006351 | 1006 |
| 85 | 3300015261 | Ga0182006_1001779 | Ga0182006_10017799 | 1006 |
| 86 | 3300025226 | Ga0209674_101285 | Ga0209674_1012852 | 1006 |
| 87 | 3300025228 | Ga0209672_100410 | Ga0209672_10041014 | 1006 |
| 88 | 3300025229 | Ga0209147_100002 | Ga0209147_100002648 | 1006 |
| 89 | 3300025242 | Ga0209258_100002 | Ga0209258_100002648 | 1006 |
| 90 | 3300025254 | Ga0209148_1001931 | Ga0209148_10019312 | 1006 |
| 91 | 3300025272 | Ga0209455_1000009 | Ga0209455_1000009529 | 1006 |
| 92 | 3300025913 | Ga0207695_10002175 | Ga0207695_1000217514 | 1006 |
| 93 | 3300025981 | Ga0207640_10000045 | Ga0207640_1000004581 | 1006 |
| 94 | 3300026116 | Ga0207674_10023133 | Ga0207674_100231332 | 1006 |
| 95 | 3300035118 | Ga0373954_0005178 | Ga0373954_0005178_624_3941 | 1006 |
| 96 | 3300035119 | Ga0373956_0001672 | Ga0373956_0001672_3813_7130 | 1006 |
| 97 | 3300037418 | Ga0395900_0006281 | Ga0395900_0006281_6793_10104 | 1006 |
| 98 | 3300054114 | Ga0501084_0002365 | Ga0501084_0002365_11688_14951 | 1006 |
| 99 | 3300025291 | Ga0209675_1003501 | Ga0209675_10035014 | 1007 |
| 100 | iso_pu_bacteria | 2811994881 | 2812368937 | 1007 |
| 101 | iso_pu_bacteria | 2923519811 | 2923523012 | 1007 |
| 102 | 3300003752 | Ga0055539_1000110 | Ga0055539_100011075 | 1008 |
| 103 | 3300003759 | Ga0055525_1000162 | Ga0055525_100016273 | 1008 |
| 104 | 3300005842 | Ga0068858_100002093 | Ga0068858_10000209312 | 1008 |
| 105 | 3300009094 | Ga0111539_10048037 | Ga0111539_100480371 | 1008 |
| 106 | 3300013104 | Ga0157370_10000021 | Ga0157370_10000021119 | 1008 |
| 107 | 3300025224 | Ga0209784_100014 | Ga0209784_100014372 | 1008 |
| 108 | 3300025225 | Ga0209566_100011 | Ga0209566_100011372 | 1008 |
| 109 | 3300025226 | Ga0209674_100032 | Ga0209674_100032113 | 1008 |
| 110 | 3300025230 | Ga0209563_100029 | Ga0209563_100029113 | 1008 |
| 111 | 3300025253 | Ga0209677_100042 | Ga0209677_10004299 | 1008 |
| 112 | 3300026035 | Ga0207703_10001773 | Ga0207703_100017738 | 1008 |
| 113 | 3300039062 | Ga0400483_254075 | Ga0400483_254075_1498_4938 | 1008 |
| 114 | iso_pu_bacteria | 2522572158 | 2523106030 | 1008 |
| 115 | 3300005344 | Ga0070661_100000127 | Ga0070661_10000012724 | 1009 |
| 116 | 3300005455 | Ga0070663_100000005 | Ga0070663_100000005104 | 1009 |
| 117 | 3300005564 | Ga0070664_100000001 | Ga0070664_10000000164 | 1009 |
| 118 | 3300005614 | Ga0068856_100000231 | Ga0068856_10000023141 | 1009 |
| 119 | 3300013307 | Ga0157372_10000136 | Ga0157372_100001369 | 1009 |
| 120 | 3300015261 | Ga0182006_1002680 | Ga0182006_10026802 | 1009 |
| 121 | 3300025920 | Ga0207649_10000185 | Ga0207649_1000018524 | 1009 |
| 122 | 3300025945 | Ga0207679_10000003 | Ga0207679_10000003460 | 1009 |
| 123 | 3300026067 | Ga0207678_10000002 | Ga0207678_10000002327 | 1009 |
| 124 | 3300026078 | Ga0207702_10001227 | Ga0207702_1000122715 | 1009 |
| 125 | 3300042006 | Ga0439432_003426 | Ga0439432_003426_2104_5373 | 1009 |
| 126 | 3300042010 | Ga0439452_001841 | Ga0439452_001841_803_4072 | 1009 |
| 127 | 3300042435 | Ga0439434_0001908 | Ga0439434_0001908_1504_4773 | 1009 |
| 128 | iso_pu_bacteria | 2842805378 | 2842808367 | 1009 |
| 129 | iso_pu_bacteria | 2990196909 | 2990198204 | 1009 |
| 130 | 3300005344 | Ga0070661_100000819 | Ga0070661_10000081916 | 1010 |
| 131 | 3300031250 | Ga0265331_10002000 | Ga0265331_100020008 | 1010 |
| 132 | 3300031251 | Ga0265327_10000007 | Ga0265327_1000000772 | 1010 |
| 133 | iso_pu_bacteria | 2738543020 | 2739287030 | 1011 |
| 134 | iso_pu_bacteria | 2738543021 | 2739292343 | 1011 |
| 135 | iso_pu_bacteria | 2606217733 | 2608380264 | 1012 |
| 136 | iso_pu_bacteria | 2995392953 | 2995396121 | 1012 |
| 137 | 3300013104 | Ga0157370_10000199 | Ga0157370_1000019919 | 1013 |
| 138 | 3300025295 | Ga0209564_1000297 | Ga0209564_100029761 | 1013 |
| 139 | iso_pu_bacteria | 2824600985 | 2824604314 | 1013 |
| 140 | iso_pu_bacteria | 2824609381 | 2824614213 | 1013 |
| 141 | iso_pu_bacteria | 2824653114 | 2824653430 | 1013 |
| 142 | iso_pu_bacteria | 2874628541 | 2874631538 | 1013 |
| 143 | iso_pu_bacteria | 2888419890 | 2888421522 | 1013 |
| 144 | iso_pu_bacteria | 2941531003 | 2941532760 | 1013 |
| 145 | iso_pu_bacteria | 8016630954 | 8016638489 | 1013 |
| 146 | iso_pu_bacteria | 2841957949 | 2841965958 | 1014 |
| 147 | 3300025932 | Ga0207690_10001358 | Ga0207690_1000135811 | 1015 |
| 148 | 3300025297 | Ga0209758_1015156 | Ga0209758_10151562 | 1017 |
| 149 | 3300035695 | Ga0373927_0001871 | Ga0373927_0001871_10849_14154 | 1019 |
| 150 | 3300046524 | Ga0495648_0000414 | Ga0495648_0000414_3404_6721 | 1021 |
| 151 | 3300044656 | Ga0466969_0015669 | Ga0466969_0015669_288_3605 | 1023 |
| 152 | 3300044658 | Ga0466972_0003196 | Ga0466972_0003196_2857_6174 | 1023 |
| 153 | 3300044694 | Ga0466963_0006684 | Ga0466963_0006684_1454_4771 | 1023 |
| 154 | 3300044765 | Ga0466970_0002378 | Ga0466970_0002378_1574_4891 | 1023 |
| 155 | 3300045049 | Ga0466959_0001079 | Ga0466959_0001079_8904_12221 | 1023 |
| 156 | iso_pu_bacteria | 2596583598 | 2597029894 | 1024 |
| 157 | iso_pu_bacteria | 2599185178 | 2599443749 | 1024 |
| 158 | iso_pu_bacteria | 2885266251 | 2885267364 | 1024 |
| 159 | iso_pu_bacteria | 2900577576 | 2900579589 | 1024 |
| 160 | iso_pu_bacteria | 2928058823 | 2928062013 | 1024 |
| 161 | 3300025224 | Ga0209784_100724 | Ga0209784_1007244 | 1027 |
| 162 | 3300025226 | Ga0209674_100178 | Ga0209674_10017872 | 1027 |
| 163 | 3300025246 | Ga0209646_1000058 | Ga0209646_1000058166 | 1027 |
| 164 | 3300025254 | Ga0209148_1000043 | Ga0209148_1000043363 | 1027 |
| 165 | 3300001979 | JGI24740J21852_10000458 | JGI24740J21852_100004588 | 1028 |
| 166 | 3300001979 | JGI24740J21852_10000572 | JGI24740J21852_100005725 | 1028 |
| 167 | 3300025225 | Ga0209566_100976 | Ga0209566_1009764 | 1028 |
| 168 | 3300044693 | Ga0466961_0000163 | Ga0466961_0000163_29456_32773 | 1028 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3g8d-assembly1.cif.gz_A | crystal structure of the biotin carboxylase subunit, e296a mutant, of acetyl-coa carboxylase from escherichia coli | 0.9475 | 2 | 452 |
| 3rv3-assembly1.cif.gz_B | crystal structure of e.coli biotin carboxylase in complex with two adp and one mg ion | 0.946 | 4 | 453 |
| 3va7-assembly1.cif.gz_A | crystal structure of the kluyveromyces lactis urea carboxylase | 0.9456 | 3 | 451 |
| 5i8i-assembly2.cif.gz_D | crystal structure of the k. lactis urea amidolyase | 0.9456 | 3 | 451 |
| 3jzf-assembly1.cif.gz_A | crystal structure of biotin carboxylase from e. coli in complex with benzimidazoles series | 0.9454 | 2 | 453 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5h80B01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9548 | 5 | 127 | 3.40.50.20 |
| 5h80B03 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9491 | 201 | 456 | 3.30.470.20 |
| 5mlkB02 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9487 | 200 | 446 | 3.30.470.20 |
| af_A0A2R8PV58_229_474_3.30.470.20 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.9467 | 201 | 451 | 3.30.470.20 |
| 2w6pB02 | Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain | 0.942 | 200 | 453 | 3.30.470.20 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A2S6D9V9-F1-model_v4 | deleted | 0.9842 | 200 | 287 |
|
| AF-A0A2E8VS64-F1-model_v4 | Biotin carboxylation domain-containing protein | 0.9784 | 1 | 81 |
GO:0005524
GO:0016874 |
| AF-A0A2S6D9V9-F1-model_v4 | deleted | 0.9726 | 200 | 287 |
|
| AF-A0A4Q2L629-F1-model_v4 | deleted | 0.9662 | 183 | 273 |
|
| AF-X1VRZ5-F1-model_v4 | CoA carboxyltransferase C-terminal domain-containing protein | 0.9653 | 795 | 887 |
GO:0004658
|
Predicted Structure (AlphaFold2)
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