F252247

General Info

Members Datasets Scaffolds Average Seq Length
168 129 336 999

Family's Representative Sequence

Representative Sequence 3300005577|Ga0068857_100034177|Ga0068857_1000341771
Length 1117
Sequence MSSESFGAVGTIDSVKAGLERDVCQCSADVVAPASLRAGEAASLPPLHRQGETSRAGECGGCKRSWKFILSLSKDFVTGLQGCGRYTPQKLLTHPSASRSVPGTLSYEKVSMIGFIIKKIIGSKNDREVKRLQPMVTQINEVEASLQSKPDEYLREKTAEWKARCSAIQDDAELKAALLEILPEAFAVVKNTCRRLTDRKTEVNVRGYPILWEMIPFDVQLIGGYALHTGRIAEMATGEGKTLVATLPVYLNALSGRGVHLVTVNDYLAARDSEWMGAVYRFLGLTVGCILHDQSPAERRAQYACDITYGTNAEFGFDYLRDNGMAVRAEEQVQRGHYFAIIDEVDSILIDEARTPLIISGPSVINTDHGIYDRFKPQVESLFHAQERLTSRFLNEARDLIKKRQPEDGSNPVSGDELEREIGLLLYRVKLGTPRSDELMQLLEDPENMRLMNKAELALHADQSKRDLYAQKEQLFFAIEEKSHDADLTEKGREFLSPKDPEAFVLPDLAAAFHEIDIGAEKDPHKRLEMKTKLQQQLEGKAQQIHSISQLLKAYGLYLKDIHYIVEEGKVVIVDENTGRKMAGRRWSDGLHQAVEAKEAVEVERETQTYATITIQNYFRLYRKLAGMTGTAETEANEFHDIYKLGVLVVPTNRAVARKDAHDTVYKTRREKFSAVVKEVQTVHAAGRPILLGTVSVESSEMLSKMLKKVGIVHSVLNAKYHQQEAEIVARAGQRGSVTIATNMAGRGTDIKLGAGVADVGGLHVIGTERHEARRIDRQLRGRCARQGDPGSSHFFISLEDDLMRLFGSDKIVKYMEKMGLEEGQELEHPLLNRSIEQAQKRVEQHNFQIRKRTLEYDDVMNKQREVIYGFRNEIIHGEDVRDRLMDVMEEVVLQKTQEFTSAEDPADWNVRGLADWINLTFPLGISEEEIVKVARAGTEEPVSGSLFDGLTAAQFAVCNMIANAIREAYELKVSFEKEDALKSVERYTILSAIDKLWQEHLYAMDGLRSSIGLRAYGQRDPLLEYKGEAFKLFGELMVNIKTEICHNIFRSASSLMAFEQFLRKLPQRKAGSDMVSEANEALAKAKPVRSGPKVGRNDPCPCNSGKKFKNCCGKNG

Samples

Sample ID Description Type Environment
1 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
59 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
60 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
61 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
64 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
65 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
66 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
67 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
68 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
69 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
70 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
71 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
72 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
73 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
74 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
75 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
79 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
82 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
83 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
84 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
85 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
86 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
89 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
90 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
91 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
92 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
93 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
97 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
98 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
103 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
108 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
114 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
117 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
119 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
120 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
121 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
122 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
123 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
124 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
125 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
126 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
127 2718217752 Candidatus Xiphinematobacter sp. Idaho Grape Isolate Unclassified
128 2786546517 Verrucomicrobia bacterium LW23 Isolate Rhizoplane
129 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.21
Metatranscriptomes 0
Isolates 1.79

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.38
Nodule 0
Rhizoplane 6.55
Rhizosphere 88.1
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068857_100034177 3300005577 Bacteria 4498
2 JGI25406J46586_10000189 3300003203 Bacteria 27494
3 rootH2_10002966 3300003320 Bacteria 63709
4 Ga0070658_10028904 3300005327 Bacteria 4451
5 Ga0070670_100021870 3300005331 Bacteria 5501
6 Ga0070689_100002597 3300005340 Bacteria 11836
7 Ga0070661_100000715 3300005344 Bacteria 24345
8 Ga0070671_100037640 3300005355 Bacteria 4013
9 Ga0070673_100007675 3300005364 Bacteria 7136
10 Ga0070659_100004786 3300005366 Bacteria 9678
11 Ga0070705_100013760 3300005440 Bacteria 4144
12 Ga0070681_10039731 3300005458 Bacteria 4715
13 Ga0070706_100000035 3300005467 Bacteria 152107
14 Ga0070706_100000343 3300005467 Bacteria 56046
15 Ga0070706_100009888 3300005467 Bacteria 8858
16 Ga0070707_100002278 3300005468 Bacteria 18346
17 Ga0070707_100010859 3300005468 Bacteria 8481
18 Ga0070698_100004983 3300005471 Bacteria 14549
19 Ga0070699_100005264 3300005518 Bacteria 11360
20 Ga0070699_100045148 3300005518 Bacteria 3813
21 Ga0070697_100026557 3300005536 Bacteria 4627
22 Ga0068853_100000002 3300005539 Bacteria 485323
23 Ga0068855_100024243 3300005563 Bacteria 7263
24 Ga0068857_100002726 3300005577 Bacteria 14491
25 Ga0068856_100000106 3300005614 Bacteria 81717
26 Ga0068856_100021071 3300005614 Bacteria 6335
27 Ga0068859_100032923 3300005617 Bacteria 5206
28 Ga0068858_100015803 3300005842 Bacteria 7099
29 Ga0081455_10000770 3300005937 Bacteria 41373
30 Ga0081539_10000287 3300005985 Bacteria 113988
31 Ga0070717_10015243 3300006028 Bacteria 5931
32 Ga0075428_100007808 3300006844 Bacteria 11859
33 Ga0075431_100028166 3300006847 Bacteria 5769
34 Ga0097620_100032923 3300006931 Bacteria 5206
35 Ga0105240_10026502 3300009093 Bacteria 7606
36 Ga0111539_10029437 3300009094 Bacteria 6688
37 Ga0114129_10000442 3300009147 Bacteria 49250
38 Ga0105243_10000415 3300009148 Bacteria 44837
39 Ga0105242_10012205 3300009176 Bacteria 6612
40 Ga0105238_10004185 3300009551 Bacteria 14323
41 Ga0105239_10005911 3300010375 Bacteria 14252
42 Ga0157373_10010600 3300013100 Bacteria 6783
43 Ga0157374_10000026 3300013296 Bacteria 238236
44 Ga0157378_10027818 3300013297 Bacteria 4987
45 Ga0157378_10068427 3300013297 Bacteria 3184
46 Ga0157376_10000500 3300014969 Bacteria 25354
47 Ga0207645_10011153 3300025907 Bacteria 6147
48 Ga0207705_10022935 3300025909 Bacteria 4451
49 Ga0207684_10000043 3300025910 Bacteria 259939
50 Ga0207684_10004414 3300025910 Bacteria 13249
51 Ga0207707_10017305 3300025912 Bacteria 6283
52 Ga0207663_10004258 3300025916 Bacteria 7099
53 Ga0207649_10001156 3300025920 Bacteria 15890
54 Ga0207646_10004744 3300025922 Bacteria 14638
55 Ga0207646_10005562 3300025922 Bacteria 13229
56 Ga0207646_10012526 3300025922 Bacteria 8143
57 Ga0207650_10042717 3300025925 Bacteria 3326
58 Ga0207690_10008936 3300025932 Bacteria 5947
59 Ga0207709_10015664 3300025935 Bacteria 4206
60 Ga0207665_10021079 3300025939 Bacteria 4283
61 Ga0207639_10000009 3300026041 Bacteria 432727
62 Ga0207708_10002220 3300026075 Bacteria 14360
63 Ga0207702_10000897 3300026078 Bacteria 30919
64 Ga0207641_10019393 3300026088 Bacteria 5582
65 Ga0207674_10004446 3300026116 Bacteria 16849
66 Ga0207674_10036497 3300026116 Bacteria 5118
67 Ga0265323_10000506 3300028653 Bacteria 21837
68 Ga0265338_10000008 3300028800 Bacteria 481542
69 Ga0265338_10000041 3300028800 Bacteria 230676
70 Ga0265338_10000067 3300028800 Bacteria 186731
71 Ga0265338_10001258 3300028800 Bacteria 41771
72 Ga0265338_10002175 3300028800 Bacteria 30108
73 Ga0265338_10004000 3300028800 Bacteria 20259
74 Ga0265338_10005852 3300028800 Bacteria 15871
75 Ga0265338_10011663 3300028800 Bacteria 10123
76 Ga0265338_10015756 3300028800 Bacteria 8279
77 Ga0265324_10000603 3300029957 Bacteria 24608
78 Ga0265320_10000157 3300031240 Bacteria 56450
79 Ga0265325_10014148 3300031241 Bacteria 4518
80 Ga0265329_10000433 3300031242 Bacteria 22025
81 Ga0265340_10000437 3300031247 Bacteria 22458
82 Ga0265339_10002554 3300031249 Bacteria 12979
83 Ga0265327_10001414 3300031251 Bacteria 30563
84 Ga0265327_10006645 3300031251 Bacteria 9186
85 Ga0265327_10020618 3300031251 Bacteria 4008
86 Ga0265316_10007921 3300031344 Bacteria 9937
87 Ga0265313_10001801 3300031595 Bacteria 19585
88 Ga0265314_10000073 3300031711 Bacteria 148691
89 Ga0373926_0004356 3300035083 Bacteria 4644
90 Ga0373928_0000071 3300035084 Bacteria 17769
91 Ga0373944_0001853 3300035089 Bacteria 5336
92 Ga0373932_0000008 3300035112 Bacteria 167879
93 Ga0373962_0000016 3300035242 Bacteria 48133
94 Ga0373931_0000011 3300035691 Bacteria 304643
95 Ga0373935_0004211 3300035692 Bacteria 8431
96 Ga0373947_0004756 3300035725 Bacteria 7959
97 Ga0373937_0002365 3300036401 Bacteria 15706
98 Ga0373937_0022768 3300036401 Bacteria 5636
99 Ga0373925_0000752 3300037068 Bacteria 29787
100 Ga0373925_0023641 3300037068 Bacteria 4484
101 Ga0395899_0000020 3300037312 Bacteria 404354
102 Ga0395898_0000005 3300037466 Bacteria 621247
103 Ga0395901_0087322 3300038443 Bacteria 3261
104 Ga0436365_1198295 3300039437 Bacteria 7257
105 Ga0436360_0179365 3300039438 Bacteria 8879
106 Ga0466965_0002020 3300044683 Bacteria 8499
107 Ga0466971_0000006 3300044719 Bacteria 128202
108 Ga0451576_0024910 3300045051 Bacteria 6456
109 Ga0451576_0043495 3300045051 Bacteria 4739
110 Ga0495618_0001378 3300046514 Bacteria 16347
111 Ga0495630_0000190 3300046517 Bacteria 48119
112 Ga0495630_0007766 3300046517 Bacteria 7680
113 Ga0495630_0021395 3300046517 Bacteria 4776
114 Ga0495643_0001473 3300046522 Bacteria 21510
115 Ga0495666_0020434 3300046526 Bacteria 3281
116 Ga0495652_0008016 3300046529 Bacteria 9684
117 Ga0495640_0025611 3300046533 Bacteria 4275
118 Ga0495586_0000060 3300046535 Bacteria 65891
119 Ga0495586_0001207 3300046535 Bacteria 14528
120 Ga0495634_0008126 3300046642 Bacteria 7821
121 Ga0495634_0038805 3300046642 Bacteria 3245
122 Ga0495658_0006052 3300046683 Bacteria 5944
123 Ga0495658_0009095 3300046683 Bacteria 4939
124 Ga0495613_0009066 3300046689 Bacteria 7380
125 Ga0495674_0008194 3300047319 Bacteria 9971
126 Ga0495676_0019195 3300047321 Bacteria 6015
127 Ga0495684_0028370 3300047471 Bacteria 4297
128 Ga0496102_0000650 3300048905 Bacteria 35051
129 Ga0496103_0007084 3300048906 Bacteria 6695
130 Ga0496104_0007730 3300048907 Bacteria 9521
131 Ga0496104_0058168 3300048907 Bacteria 3659
132 Ga0496106_0006905 3300048909 Bacteria 8399
133 Ga0496109_0000241 3300048912 Bacteria 53091
134 Ga0496109_0004377 3300048912 Bacteria 11799
135 Ga0496112_0015454 3300048915 Bacteria 7125
136 Ga0496113_0019921 3300048916 Bacteria 4704
137 Ga0496115_0023789 3300048918 Bacteria 4757
138 Ga0496125_0000148 3300048928 Bacteria 154612
139 Ga0501031_0000017 3300049568 Bacteria 106972
140 Ga0501032_0000020 3300049569 Bacteria 148483
141 Ga0501032_0012589 3300049569 Bacteria 6039
142 Ga0501033_0000001 3300049570 Bacteria 795921
143 Ga0501033_0000020 3300049570 Bacteria 192214
144 Ga0501033_0000611 3300049570 Bacteria 33102
145 Ga0501037_0000010 3300049573 Bacteria 200115
146 Ga0501037_0022088 3300049573 Bacteria 4709
147 Ga0501038_0000861 3300049574 Bacteria 26893
148 Ga0501039_0001089 3300049575 Bacteria 19895
149 Ga0501043_0000827 3300049579 Bacteria 27468
150 Ga0501043_0001429 3300049579 Bacteria 20863
151 Ga0501043_0034981 3300049579 Bacteria 3951
152 Ga0501047_0001145 3300049581 Bacteria 26300
153 Ga0501083_0001242 3300049744 Bacteria 17303
154 Ga0501035_0000001 3300049822 Bacteria 1037138
155 Ga0501044_0000265 3300049823 Bacteria 66253
156 Ga0501044_0000275 3300049823 Bacteria 65642
157 Ga0501044_0034001 3300049823 Bacteria 5351
158 nmdc:mga0k408_392_c1 3300050493 Bacteria 23945
159 nmdc:mga05p37_11627_c1 3300050507 Bacteria 10490
160 nmdc:mga06r32_32063_c1 3300050510 Bacteria 4939
161 Ga0495601_0013114 3300053077 Bacteria 4982
162 Ga0500555_000003 3300053103 Bacteria 392994
163 Ga0500556_0000205 3300053104 Bacteria 48547
164 Ga0500616_0003907 3300053153 Bacteria 10960
165 Ga0466962_0000013 3300061719 Bacteria 115412
166 2718716100 2718217752 Bacteria 915884
167 2787437462 2786546517 Bacteria 6614109
168 2787508639 2786546548 Bacteria 4745694
169 Ga0068857_100034177
170 JGI25406J46586_10000189
171 rootH2_10002966
172 Ga0070658_10028904
173 Ga0070670_100021870
174 Ga0070689_100002597
175 Ga0070661_100000715
176 Ga0070671_100037640
177 Ga0070673_100007675
178 Ga0070659_100004786
179 Ga0070705_100013760
180 Ga0070681_10039731
181 Ga0070706_100000035
182 Ga0070706_100000343
183 Ga0070706_100009888
184 Ga0070707_100002278
185 Ga0070707_100010859
186 Ga0070698_100004983
187 Ga0070699_100005264
188 Ga0070699_100045148
189 Ga0070697_100026557
190 Ga0068853_100000002
191 Ga0068855_100024243
192 Ga0068857_100002726
193 Ga0068856_100000106
194 Ga0068856_100021071
195 Ga0068859_100032923
196 Ga0068858_100015803
197 Ga0081455_10000770
198 Ga0081539_10000287
199 Ga0070717_10015243
200 Ga0075428_100007808
201 Ga0075431_100028166
202 Ga0097620_100032923
203 Ga0105240_10026502
204 Ga0111539_10029437
205 Ga0114129_10000442
206 Ga0105243_10000415
207 Ga0105242_10012205
208 Ga0105238_10004185
209 Ga0105239_10005911
210 Ga0157373_10010600
211 Ga0157374_10000026
212 Ga0157378_10027818
213 Ga0157378_10068427
214 Ga0157376_10000500
215 Ga0207645_10011153
216 Ga0207705_10022935
217 Ga0207684_10000043
218 Ga0207684_10004414
219 Ga0207707_10017305
220 Ga0207663_10004258
221 Ga0207649_10001156
222 Ga0207646_10004744
223 Ga0207646_10005562
224 Ga0207646_10012526
225 Ga0207650_10042717
226 Ga0207690_10008936
227 Ga0207709_10015664
228 Ga0207665_10021079
229 Ga0207639_10000009
230 Ga0207708_10002220
231 Ga0207702_10000897
232 Ga0207641_10019393
233 Ga0207674_10004446
234 Ga0207674_10036497
235 Ga0265323_10000506
236 Ga0265338_10000008
237 Ga0265338_10000041
238 Ga0265338_10000067
239 Ga0265338_10001258
240 Ga0265338_10002175
241 Ga0265338_10004000
242 Ga0265338_10005852
243 Ga0265338_10011663
244 Ga0265338_10015756
245 Ga0265324_10000603
246 Ga0265320_10000157
247 Ga0265325_10014148
248 Ga0265329_10000433
249 Ga0265340_10000437
250 Ga0265339_10002554
251 Ga0265327_10001414
252 Ga0265327_10006645
253 Ga0265327_10020618
254 Ga0265316_10007921
255 Ga0265313_10001801
256 Ga0265314_10000073
257 Ga0373926_0004356
258 Ga0373928_0000071
259 Ga0373944_0001853
260 Ga0373932_0000008
261 Ga0373962_0000016
262 Ga0373931_0000011
263 Ga0373935_0004211
264 Ga0373947_0004756
265 Ga0373937_0002365
266 Ga0373937_0022768
267 Ga0373925_0000752
268 Ga0373925_0023641
269 Ga0395899_0000020
270 Ga0395898_0000005
271 Ga0395901_0087322
272 Ga0436365_1198295
273 Ga0436360_0179365
274 Ga0466965_0002020
275 Ga0466971_0000006
276 Ga0451576_0024910
277 Ga0451576_0043495
278 Ga0495618_0001378
279 Ga0495630_0000190
280 Ga0495630_0007766
281 Ga0495630_0021395
282 Ga0495643_0001473
283 Ga0495666_0020434
284 Ga0495652_0008016
285 Ga0495640_0025611
286 Ga0495586_0000060
287 Ga0495586_0001207
288 Ga0495634_0008126
289 Ga0495634_0038805
290 Ga0495658_0006052
291 Ga0495658_0009095
292 Ga0495613_0009066
293 Ga0495674_0008194
294 Ga0495676_0019195
295 Ga0495684_0028370
296 Ga0496102_0000650
297 Ga0496103_0007084
298 Ga0496104_0007730
299 Ga0496104_0058168
300 Ga0496106_0006905
301 Ga0496109_0000241
302 Ga0496109_0004377
303 Ga0496112_0015454
304 Ga0496113_0019921
305 Ga0496115_0023789
306 Ga0496125_0000148
307 Ga0501031_0000017
308 Ga0501032_0000020
309 Ga0501032_0012589
310 Ga0501033_0000001
311 Ga0501033_0000020
312 Ga0501033_0000611
313 Ga0501037_0000010
314 Ga0501037_0022088
315 Ga0501038_0000861
316 Ga0501039_0001089
317 Ga0501043_0000827
318 Ga0501043_0001429
319 Ga0501043_0034981
320 Ga0501047_0001145
321 Ga0501083_0001242
322 Ga0501035_0000001
323 Ga0501044_0000265
324 Ga0501044_0000275
325 Ga0501044_0034001
326 nmdc:mga0k408_392_c1
327 nmdc:mga05p37_11627_c1
328 nmdc:mga06r32_32063_c1
329 Ga0495601_0013114
330 Ga0500555_000003
331 Ga0500556_0000205
332 Ga0500616_0003907
333 Ga0466962_0000013
334 2718716100
335 2787437462
336 2787508639

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21090

P-loop_SecA

SecA P-loop domain

655

758

0.98

PF02810

SEC-C

SEC-C motif

1097

1115

0.97

PF21090

P-loop_SecA

SecA P-loop domain

754

824

0.97

PF07517

SecA_DEAD

SecA DEAD-like domain

117

640

0.95

PF07516

SecA_SW

SecA Wing and Scaffold domain

826

1053

0.91

PF01043

SecA_PP_bind

SecA preprotein cross-linking domain

453

596

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bxz-assembly1.cif.gz_A crystal structure of the isolated dead motor domains from escherichia coli seca 0.8836 11 635
3bxz-assembly1.cif.gz_A crystal structure of the isolated dead motor domains from escherichia coli seca 0.8797 11 635
3dl8-assembly1.cif.gz_A structure of the complex of aquifex aeolicus secyeg and bacillus subtilis seca 0.8655 14 863
3dl8-assembly1.cif.gz_A structure of the complex of aquifex aeolicus secyeg and bacillus subtilis seca 0.8551 14 863
5eul-assembly1.cif.gz_A structure of the seca-secy complex with a translocating polypeptide substrate 0.8201 16 863
ID Description Score Start End Superfamily
af_A0A1D6MS70_87_296_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9528 20 250 3.40.50.300
1m74A03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9487 488 654 3.40.50.300
af_A0A1D6MS70_87_296_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.944 20 250 3.40.50.300
2ibmB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9401 14 487 3.40.50.300
2ibmB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9332 14 487 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2V5JYK1-F1-model_v4 Preprotein translocase subunit SecA 0.9879 1 201 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0017038
GO:0031522
GO:0043952
AF-A0A2V5JYK1-F1-model_v4 Preprotein translocase subunit SecA 0.9783 1 201 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0017038
GO:0031522
GO:0043952
AF-A0A6G0EWN3-F1-model_v4 deleted 0.9734 506 587
AF-A0A3D6BUK6-F1-model_v4 Preprotein translocase subunit SecA 0.9689 65 238 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0017038
GO:0031522
GO:0043952
AF-A0A354U311-F1-model_v4 deleted 0.9681 476 580

Map