F252886

General Info

Members Datasets Scaffolds Average Seq Length
168 103 167 329

Family's Representative Sequence

Representative Sequence 3300028653|Ga0265323_10000024|Ga0265323_100000246
Length 363
Sequence MGRDFRSVAKQAGKPLPVPAGPADRVPAGDARAGMSPRASLSRPPLERMLRIHEELRRDALINCTKLVKVFEVCRKTVVRDIAFMRDRLDLPIEFDPRIQAYRYTQPVNAFPTVQVTEGELLALLVARRALEQYRGTPFHRQLEIAFDKLAGGLKDRISFSPADELRSVSFRNIGLGKADLAVFNALSAAVLRQVEVEFEYRKPGERSASRRHVQPYHLSHRENLWYLVGFDVGRAALRTYALPRIANVVAKKSPFVRPENFSPEKFFASALGILGGEGNYTVVIRFDAAVADRVRERDWHESQQLRDLHSGGLELTLRLGALAEVERWVLGWGSAAEVLEPAELRNRIARTVTSLAAVYGRG

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
49 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
50 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
51 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
54 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
55 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
56 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
57 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
66 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
67 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
68 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
69 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
70 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
71 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
74 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
75 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
76 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
77 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
78 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
79 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
80 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
81 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
82 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
83 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
84 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
85 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
103 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.4
Metatranscriptomes 0
Isolates 0.6

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.6
Rhizosphere 97.02
Stem 0
Stem Tuber 0
Unclassified 2.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10038830 3300003320 Bacteria 8100
2 rootH1_10033999 3300003323 Bacteria 6368
3 rootH1_10058244 3300003323 Bacteria 9917
4 Ga0070683_100024282 3300005329 Bacteria 5428
5 Ga0070690_100079478 3300005330 Unclassified 2144
6 Ga0068869_100005559 3300005334 Bacteria 7931
7 Ga0070689_100106141 3300005340 Unclassified 2228
8 Ga0070687_100088147 3300005343 Bacteria 1710
9 Ga0070713_100113633 3300005436 Unclassified 2364
10 Ga0070684_100100383 3300005535 Unclassified 2584
11 Ga0070686_100007799 3300005544 Bacteria 5982
12 Ga0070686_100015502 3300005544 Bacteria 4417
13 Ga0070686_100092228 3300005544 Bacteria 2028
14 Ga0070704_100351419 3300005549 Bacteria 1245
15 Ga0068857_100080173 3300005577 Bacteria 2915
16 Ga0068856_100000216 3300005614 Bacteria 62260
17 Ga0068856_100033267 3300005614 Bacteria 5048
18 Ga0068859_100125176 3300005617 Bacteria 2639
19 Ga0068863_100020275 3300005841 Bacteria 6359
20 Ga0070717_10000125 3300006028 Bacteria 57538
21 Ga0097621_100003265 3300006237 Bacteria 11153
22 Ga0068871_100005607 3300006358 Bacteria 8802
23 Ga0075433_10302916 3300006852 Unclassified 1415
24 Ga0068865_100001585 3300006881 Bacteria 13302
25 Ga0097620_100125182 3300006931 Bacteria 2639
26 Ga0105240_10031541 3300009093 Bacteria 6872
27 Ga0111539_10022911 3300009094 Bacteria 7669
28 Ga0111539_10103449 3300009094 Bacteria 3342
29 Ga0111539_10131824 3300009094 Bacteria 2927
30 Ga0105245_10266205 3300009098 Bacteria 1670
31 Ga0105243_10161529 3300009148 Bacteria 1932
32 Ga0105248_10504190 3300009177 Unclassified 1364
33 Ga0105249_10278295 3300009553 Bacteria 1670
34 Ga0157371_10094027 3300013102 Bacteria 2124
35 Ga0157369_10201947 3300013105 Bacteria 2086
36 Ga0157374_10156623 3300013296 Bacteria 2217
37 Ga0157374_10239456 3300013296 Bacteria 1784
38 Ga0163162_10209124 3300013306 Unclassified 2081
39 Ga0157372_10253885 3300013307 Unclassified 2041
40 Ga0157375_10000062 3300013308 Bacteria 113405
41 Ga0163163_10147243 3300014325 Bacteria 2399
42 Ga0163163_10645497 3300014325 Unclassified 1122
43 Ga0157376_10268163 3300014969 Unclassified 1602
44 Ga0207695_10010332 3300025913 Bacteria 11428
45 Ga0207700_10020831 3300025928 Bacteria 4463
46 Ga0207670_10011168 3300025936 Bacteria 5203
47 Ga0207670_10056934 3300025936 Bacteria 2649
48 Ga0207704_10002938 3300025938 Bacteria 7693
49 Ga0207689_10010518 3300025942 Bacteria 7966
50 Ga0207661_10014270 3300025944 Bacteria 5819
51 Ga0207702_10000298 3300026078 Bacteria 57226
52 Ga0207641_10033446 3300026088 Bacteria 4271
53 Ga0207648_10018463 3300026089 Bacteria 6313
54 Ga0207674_10045128 3300026116 Bacteria 4535
55 Ga0207428_10140105 3300027907 Bacteria 1846
56 Ga0265337_1001809 3300028556 Bacteria 10271
57 Ga0265337_1011487 3300028556 Bacteria 3050
58 Ga0265326_10032783 3300028558 Bacteria 1480
59 Ga0265323_10000024 3300028653 Bacteria 82291
60 Ga0265323_10001550 3300028653 Bacteria 11130
61 Ga0265323_10006104 3300028653 Bacteria 5085
62 Ga0265323_10013061 3300028653 Bacteria 3321
63 Ga0265323_10013654 3300028653 Bacteria 3233
64 Ga0265323_10018543 3300028653 Unclassified 2692
65 Ga0265323_10025828 3300028653 Bacteria 2218
66 Ga0265323_10028542 3300028653 Bacteria 2092
67 Ga0265322_10002304 3300028654 Bacteria 5921
68 Ga0265322_10003539 3300028654 Bacteria 4705
69 Ga0265338_10009610 3300028800 Bacteria 11490
70 Ga0265338_10048636 3300028800 Bacteria 3856
71 Ga0265338_10232019 3300028800 Unclassified 1372
72 Ga0265338_10237937 3300028800 Unclassified 1350
73 Ga0265330_10013908 3300031235 Bacteria 3741
74 Ga0265332_10008542 3300031238 Bacteria 4603
75 Ga0265320_10001676 3300031240 Bacteria 15754
76 Ga0265320_10089456 3300031240 Unclassified 1427
77 Ga0265327_10001584 3300031251 Bacteria 27733
78 Ga0265316_10000887 3300031344 Bacteria 32794
79 Ga0265316_10037099 3300031344 Bacteria 3937
80 Ga0265316_10086419 3300031344 Bacteria 2397
81 Ga0265316_10096530 3300031344 Unclassified 2250
82 Ga0265316_10192007 3300031344 Unclassified 1517
83 Ga0307408_100000009 3300031548 Bacteria 426576
84 Ga0265313_10003398 3300031595 Bacteria 12918
85 Ga0265313_10016225 3300031595 Bacteria 4292
86 Ga0265314_10000037 3300031711 Bacteria 225790
87 Ga0265342_10006662 3300031712 Bacteria 8570
88 Ga0265342_10011960 3300031712 Bacteria 5898
89 Ga0307413_10079126 3300031824 Bacteria 2100
90 Ga0307410_10000146 3300031852 Bacteria 25300
91 Ga0307412_10129054 3300031911 Bacteria 1833
92 Ga0307409_100000007 3300031995 Bacteria 81489
93 Ga0307416_100000023 3300032002 Bacteria 186960
94 Ga0395905_0031945 3300037471 Bacteria 4953
95 Ga0395905_0162894 3300037471 Bacteria 2096
96 Ga0395901_0176950 3300038443 Unclassified 2238
97 Ga0451577_0000167 3300042876 Bacteria 144675
98 Ga0451577_0043654 3300042876 Bacteria 4016
99 Ga0451577_0112080 3300042876 Bacteria 2441
100 Ga0451577_0176740 3300042876 Bacteria 1924
101 Ga0451577_0400559 3300042876 Unclassified 1245
102 Ga0451577_0612781 3300042876 Unclassified 988
103 Ga0466961_0036451 3300044693 Bacteria 3157
104 Ga0453684_0001807 3300044712 Bacteria 56696
105 Ga0453684_0068673 3300044712 Bacteria 4499
106 Ga0453684_0126559 3300044712 Bacteria 3074
107 Ga0453684_0181461 3300044712 Unclassified 2471
108 Ga0453684_0223777 3300044712 Bacteria 2178
109 Ga0453684_0521409 3300044712 Bacteria 1313
110 Ga0466957_0051756 3300044842 Unclassified 2500
111 Ga0451576_0000496 3300045051 Bacteria 86363
112 Ga0451576_0000802 3300045051 Bacteria 61527
113 Ga0451576_0032178 3300045051 Bacteria 5589
114 Ga0451576_0051663 3300045051 Bacteria 4309
115 Ga0451576_0187604 3300045051 Bacteria 2159
116 Ga0451576_0292817 3300045051 Bacteria 1702
117 Ga0451576_0435129 3300045051 Bacteria 1376
118 Ga0495662_0036895 3300046476 Bacteria 2359
119 Ga0495630_0000047 3300046517 Bacteria 98136
120 Ga0495666_0007561 3300046526 Bacteria 5436
121 Ga0495640_0219807 3300046533 Bacteria 1198
122 Ga0495586_0000003 3300046535 Bacteria 192041
123 Ga0495586_0115591 3300046535 Bacteria 1496
124 Ga0495598_0081955 3300046537 Bacteria 1037
125 Ga0495634_0003595 3300046642 Bacteria 12384
126 Ga0495613_0045958 3300046689 Bacteria 3229
127 Ga0495674_0006220 3300047319 Bacteria 11451
128 Ga0495676_0021427 3300047321 Bacteria 5644
129 Ga0496107_0006864 3300048910 Bacteria 7843
130 Ga0501031_0010746 3300049568 Bacteria 5964
131 Ga0501032_0000738 3300049569 Bacteria 26578
132 Ga0501032_0001590 3300049569 Bacteria 18093
133 Ga0501032_0074065 3300049569 Unclassified 2269
134 Ga0501033_0002999 3300049570 Bacteria 14094
135 Ga0501033_0004756 3300049570 Bacteria 10854
136 Ga0501033_0027570 3300049570 Bacteria 4270
137 Ga0501033_0253162 3300049570 Bacteria 1248
138 Ga0501034_0068666 3300049571 Bacteria 3554
139 Ga0501034_0209583 3300049571 Unclassified 1904
140 Ga0501036_0012015 3300049572 Bacteria 7177
141 Ga0501036_0021358 3300049572 Bacteria 5441
142 Ga0501037_0030568 3300049573 Unclassified 3979
143 Ga0501038_0000142 3300049574 Bacteria 61439
144 Ga0501038_0004325 3300049574 Bacteria 13205
145 Ga0501039_0062399 3300049575 Bacteria 2887
146 Ga0501042_0054081 3300049578 Unclassified 2864
147 Ga0501042_0187219 3300049578 Unclassified 1493
148 Ga0501043_0006643 3300049579 Bacteria 9256
149 Ga0501043_0121177 3300049579 Bacteria 2051
150 Ga0501043_0354048 3300049579 Bacteria 1115
151 Ga0501046_0002672 3300049580 Bacteria 16625
152 Ga0501046_0009209 3300049580 Bacteria 8549
153 Ga0501047_0007370 3300049581 Bacteria 10344
154 Ga0501047_0169607 3300049581 Bacteria 2051
155 Ga0501048_0095962 3300049582 Bacteria 2091
156 Ga0501083_0000236 3300049744 Bacteria 35550
157 Ga0501083_0000961 3300049744 Bacteria 19059
158 Ga0501083_0093584 3300049744 Unclassified 1984
159 Ga0501035_0009823 3300049822 Bacteria 8889
160 Ga0501035_0020432 3300049822 Bacteria 6080
161 Ga0501035_0261121 3300049822 Unclassified 1468
162 Ga0501044_0003470 3300049823 Bacteria 17763
163 Ga0501044_0013673 3300049823 Bacteria 8771
164 Ga0501044_0045872 3300049823 Bacteria 4526
165 nmdc:mga06r32_261972_c1 3300050510 Unclassified 1716
166 nmdc:mga08y16_17505_c1 3300050511 Bacteria 7547
167 nmdc:mga0a205_91117_c1 3300050515 Bacteria 2945

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005330 Ga0070690_100079478 Ga0070690_1000794782 291
2 3300005436 Ga0070713_100113633 Ga0070713_1001136332 292
3 3300042876 Ga0451577_0112080 Ga0451577_0112080_1467_2405 292
4 3300045051 Ga0451576_0051663 Ga0451576_0051663_16_906 295
5 3300025928 Ga0207700_10020831 Ga0207700_100208313 307
6 3300044712 Ga0453684_0521409 Ga0453684_0521409_145_1134 308
7 iso_pu_bacteria 2786546940 2788434572 310
8 3300009098 Ga0105245_10266205 Ga0105245_102662052 311
9 3300013102 Ga0157371_10094027 Ga0157371_100940272 311
10 3300013307 Ga0157372_10253885 Ga0157372_102538852 311
11 3300014325 Ga0163163_10645497 Ga0163163_106454971 311
12 3300031238 Ga0265332_10008542 Ga0265332_100085422 311
13 3300009094 Ga0111539_10131824 Ga0111539_101318243 312
14 3300028556 Ga0265337_1011487 Ga0265337_10114873 312
15 3300031711 Ga0265314_10000037 Ga0265314_100000373 312
16 3300037471 Ga0395905_0162894 Ga0395905_0162894_880_1830 312
17 3300044712 Ga0453684_0001807 Ga0453684_0001807_27967_28905 312
18 3300046535 Ga0495586_0115591 Ga0495586_0115591_103_1041 312
19 3300005340 Ga0070689_100106141 Ga0070689_1001061412 313
20 3300009093 Ga0105240_10031541 Ga0105240_100315411 313
21 3300013105 Ga0157369_10201947 Ga0157369_102019472 313
22 3300013296 Ga0157374_10239456 Ga0157374_102394562 313
23 3300027907 Ga0207428_10140105 Ga0207428_101401051 313
24 3300028653 Ga0265323_10006104 Ga0265323_100061043 313
25 3300042876 Ga0451577_0612781 Ga0451577_0612781_21_962 313
26 3300044712 Ga0453684_0068673 Ga0453684_0068673_53_997 313
27 3300045051 Ga0451576_0000496 Ga0451576_0000496_64526_65467 313
28 3300045051 Ga0451576_0435129 Ga0451576_0435129_219_1163 313
29 3300050511 nmdc:mga08y16_17505_c1 nmdc:mga08y16_17505_c1_87_1040 313
30 3300005544 Ga0070686_100007799 Ga0070686_1000077993 314
31 3300006028 Ga0070717_10000125 Ga0070717_100001254 314
32 3300009177 Ga0105248_10504190 Ga0105248_105041902 314
33 3300009553 Ga0105249_10278295 Ga0105249_102782953 314
34 3300013306 Ga0163162_10209124 Ga0163162_102091243 314
35 3300013308 Ga0157375_10000062 Ga0157375_1000006264 314
36 3300014325 Ga0163163_10147243 Ga0163163_101472432 314
37 3300028800 Ga0265338_10048636 Ga0265338_100486363 314
38 3300031235 Ga0265330_10013908 Ga0265330_100139084 314
39 3300042876 Ga0451577_0000167 Ga0451577_0000167_140873_141832 314
40 3300044693 Ga0466961_0036451 Ga0466961_0036451_2003_2962 314
41 3300044712 Ga0453684_0223777 Ga0453684_0223777_562_1518 314
42 3300049570 Ga0501033_0002999 Ga0501033_0002999_1417_2373 314
43 3300049571 Ga0501034_0209583 Ga0501034_0209583_349_1323 314
44 3300049579 Ga0501043_0121177 Ga0501043_0121177_308_1282 314
45 3300049581 Ga0501047_0169607 Ga0501047_0169607_308_1282 314
46 3300049822 Ga0501035_0261121 Ga0501035_0261121_236_1183 314
47 3300013296 Ga0157374_10156623 Ga0157374_101566232 316
48 3300049744 Ga0501083_0093584 Ga0501083_0093584_101_1066 321
49 3300046537 Ga0495598_0081955 Ga0495598_0081955_13_987 323
50 3300005544 Ga0070686_100092228 Ga0070686_1000922281 325
51 3300006852 Ga0075433_10302916 Ga0075433_103029163 325
52 3300028653 Ga0265323_10001550 Ga0265323_100015509 325
53 3300028654 Ga0265322_10003539 Ga0265322_100035392 325
54 3300031344 Ga0265316_10000887 Ga0265316_100008872 325
55 3300050510 nmdc:mga06r32_261972_c1 nmdc:mga06r32_261972_c1_387_1376 325
56 3300050515 nmdc:mga0a205_91117_c1 nmdc:mga0a205_91117_c1_444_1433 325
57 3300005544 Ga0070686_100015502 Ga0070686_1000155022 326
58 3300042876 Ga0451577_0043654 Ga0451577_0043654_2082_3080 326
59 3300045051 Ga0451576_0187604 Ga0451576_0187604_475_1473 326
60 3300046476 Ga0495662_0036895 Ga0495662_0036895_125_1108 326
61 3300046517 Ga0495630_0000047 Ga0495630_0000047_73131_74114 326
62 3300046526 Ga0495666_0007561 Ga0495666_0007561_4079_5062 326
63 3300046533 Ga0495640_0219807 Ga0495640_0219807_160_1143 326
64 3300046535 Ga0495586_0000003 Ga0495586_0000003_158194_159177 326
65 3300046642 Ga0495634_0003595 Ga0495634_0003595_9319_10302 326
66 3300046689 Ga0495613_0045958 Ga0495613_0045958_267_1250 326
67 3300047319 Ga0495674_0006220 Ga0495674_0006220_7657_8640 326
68 3300047321 Ga0495676_0021427 Ga0495676_0021427_2919_3902 326
69 3300005329 Ga0070683_100024282 Ga0070683_1000242823 327
70 3300005535 Ga0070684_100100383 Ga0070684_1001003831 327
71 3300005614 Ga0068856_100033267 Ga0068856_1000332674 327
72 3300025944 Ga0207661_10014270 Ga0207661_100142703 327
73 3300028800 Ga0265338_10009610 Ga0265338_1000961010 327
74 3300031251 Ga0265327_10001584 Ga0265327_1000158418 327
75 3300037471 Ga0395905_0031945 Ga0395905_0031945_1358_2374 327
76 3300038443 Ga0395901_0176950 Ga0395901_0176950_918_1934 327
77 3300048910 Ga0496107_0006864 Ga0496107_0006864_67_1056 327
78 3300003323 rootH1_10033999 rootH1_100339994 328
79 3300005334 Ga0068869_100005559 Ga0068869_1000055596 328
80 3300005577 Ga0068857_100080173 Ga0068857_1000801732 328
81 3300005614 Ga0068856_100000216 Ga0068856_10000021617 328
82 3300005617 Ga0068859_100125176 Ga0068859_1001251762 328
83 3300005841 Ga0068863_100020275 Ga0068863_1000202755 328
84 3300006237 Ga0097621_100003265 Ga0097621_1000032655 328
85 3300006358 Ga0068871_100005607 Ga0068871_1000056075 328
86 3300006881 Ga0068865_100001585 Ga0068865_1000015858 328
87 3300006931 Ga0097620_100125182 Ga0097620_1001251822 328
88 3300009148 Ga0105243_10161529 Ga0105243_101615292 328
89 3300025913 Ga0207695_10010332 Ga0207695_100103324 328
90 3300025936 Ga0207670_10056934 Ga0207670_100569342 328
91 3300025938 Ga0207704_10002938 Ga0207704_100029386 328
92 3300025942 Ga0207689_10010518 Ga0207689_100105182 328
93 3300026078 Ga0207702_10000298 Ga0207702_100002987 328
94 3300026088 Ga0207641_10033446 Ga0207641_100334462 328
95 3300026089 Ga0207648_10018463 Ga0207648_100184634 328
96 3300026116 Ga0207674_10045128 Ga0207674_100451282 328
97 3300028558 Ga0265326_10032783 Ga0265326_100327832 328
98 3300028653 Ga0265323_10013061 Ga0265323_100130613 328
99 3300028653 Ga0265323_10013654 Ga0265323_100136541 328
100 3300028653 Ga0265323_10018543 Ga0265323_100185432 328
101 3300028653 Ga0265323_10025828 Ga0265323_100258281 328
102 3300028653 Ga0265323_10028542 Ga0265323_100285421 328
103 3300028800 Ga0265338_10232019 Ga0265338_102320192 328
104 3300028800 Ga0265338_10237937 Ga0265338_102379372 328
105 3300031240 Ga0265320_10089456 Ga0265320_100894561 328
106 3300031344 Ga0265316_10037099 Ga0265316_100370992 328
107 3300031344 Ga0265316_10086419 Ga0265316_100864193 328
108 3300031595 Ga0265313_10003398 Ga0265313_100033988 328
109 3300031595 Ga0265313_10016225 Ga0265313_100162252 328
110 3300031712 Ga0265342_10006662 Ga0265342_100066625 328
111 3300042876 Ga0451577_0176740 Ga0451577_0176740_151_1143 328
112 3300042876 Ga0451577_0400559 Ga0451577_0400559_56_1048 328
113 3300044712 Ga0453684_0126559 Ga0453684_0126559_1243_2235 328
114 3300044842 Ga0466957_0051756 Ga0466957_0051756_612_1613 328
115 3300045051 Ga0451576_0000802 Ga0451576_0000802_38030_39031 328
116 3300045051 Ga0451576_0292817 Ga0451576_0292817_271_1332 328
117 3300049569 Ga0501032_0000738 Ga0501032_0000738_8241_9257 328
118 3300049569 Ga0501032_0074065 Ga0501032_0074065_1253_2251 328
119 3300049570 Ga0501033_0027570 Ga0501033_0027570_2352_3368 328
120 3300049572 Ga0501036_0012015 Ga0501036_0012015_2658_3674 328
121 3300049574 Ga0501038_0000142 Ga0501038_0000142_53317_54333 328
122 3300049578 Ga0501042_0054081 Ga0501042_0054081_264_1280 328
123 3300049579 Ga0501043_0354048 Ga0501043_0354048_17_1015 328
124 3300049580 Ga0501046_0002672 Ga0501046_0002672_14191_15189 328
125 3300049744 Ga0501083_0000236 Ga0501083_0000236_21844_22830 328
126 3300049744 Ga0501083_0000961 Ga0501083_0000961_13733_14719 328
127 3300049822 Ga0501035_0020432 Ga0501035_0020432_3263_4279 328
128 3300049823 Ga0501044_0003470 Ga0501044_0003470_15183_16178 328
129 3300049823 Ga0501044_0045872 Ga0501044_0045872_1020_2036 328
130 3300003320 rootH2_10038830 rootH2_100388302 329
131 3300003323 rootH1_10058244 rootH1_100582448 329
132 3300005343 Ga0070687_100088147 Ga0070687_1000881472 329
133 3300005549 Ga0070704_100351419 Ga0070704_1003514191 329
134 3300009094 Ga0111539_10022911 Ga0111539_100229116 329
135 3300009094 Ga0111539_10103449 Ga0111539_101034492 329
136 3300014969 Ga0157376_10268163 Ga0157376_102681632 329
137 3300025936 Ga0207670_10011168 Ga0207670_100111682 329
138 3300028556 Ga0265337_1001809 Ga0265337_10018093 329
139 3300028653 Ga0265323_10000024 Ga0265323_100000246 329
140 3300028654 Ga0265322_10002304 Ga0265322_100023042 329
141 3300031240 Ga0265320_10001676 Ga0265320_100016762 329
142 3300031344 Ga0265316_10096530 Ga0265316_100965302 329
143 3300031344 Ga0265316_10192007 Ga0265316_101920072 329
144 3300031548 Ga0307408_100000009 Ga0307408_100000009316 329
145 3300031712 Ga0265342_10011960 Ga0265342_100119604 329
146 3300031824 Ga0307413_10079126 Ga0307413_100791262 329
147 3300031852 Ga0307410_10000146 Ga0307410_100001467 329
148 3300031911 Ga0307412_10129054 Ga0307412_101290541 329
149 3300031995 Ga0307409_100000007 Ga0307409_10000000755 329
150 3300032002 Ga0307416_100000023 Ga0307416_10000002318 329
151 3300044712 Ga0453684_0181461 Ga0453684_0181461_705_1715 329
152 3300045051 Ga0451576_0032178 Ga0451576_0032178_279_1289 329
153 3300049568 Ga0501031_0010746 Ga0501031_0010746_4127_5158 329
154 3300049569 Ga0501032_0001590 Ga0501032_0001590_9443_10474 329
155 3300049570 Ga0501033_0004756 Ga0501033_0004756_7308_8339 329
156 3300049570 Ga0501033_0253162 Ga0501033_0253162_18_1019 329
157 3300049571 Ga0501034_0068666 Ga0501034_0068666_889_1920 329
158 3300049572 Ga0501036_0021358 Ga0501036_0021358_1399_2430 329
159 3300049573 Ga0501037_0030568 Ga0501037_0030568_148_1179 329
160 3300049574 Ga0501038_0004325 Ga0501038_0004325_3511_4542 329
161 3300049575 Ga0501039_0062399 Ga0501039_0062399_1294_2325 329
162 3300049578 Ga0501042_0187219 Ga0501042_0187219_118_1149 329
163 3300049579 Ga0501043_0006643 Ga0501043_0006643_7235_8266 329
164 3300049580 Ga0501046_0009209 Ga0501046_0009209_354_1385 329
165 3300049581 Ga0501047_0007370 Ga0501047_0007370_1527_2558 329
166 3300049582 Ga0501048_0095962 Ga0501048_0095962_735_1766 329
167 3300049822 Ga0501035_0009823 Ga0501035_0009823_7289_8320 329
168 3300049823 Ga0501044_0013673 Ga0501044_0013673_324_1355 329

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13280

WYL

WYL domain

182

357

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4awx-assembly1.cif.gz_B moonlighting functions of feoc in the regulation of ferrous iron transport in feo 0.8198 16 71
7u02-assembly1.cif.gz_M structure of the c. crescentus drid c-domain bound to ssdna 0.8155 147 328
3f72-assembly1.cif.gz_A crystal structure of the staphylococcus aureus pi258 cadc metal binding site 2 mutant 0.8055 14 71
3j8c-assembly1.cif.gz_C model of the human eif3 pci-mpn octamer docked into the 43s em map 0.7927 29 73
4wcg-assembly1.cif.gz_A the binding mode of cyprinid herpesvirus3 orf112-zalpha to z-dna 0.7874 13 71
ID Description Score Start End Superfamily
af_P0ACL0_1_57_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9396 11 55 1.10.10.10
4a0zA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9374 12 53 1.10.10.10
1j5yA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9167 12 71 1.10.10.10
4a12C01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9099 11 53 1.10.10.10
2e1cA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9096 14 55 1.10.10.10
ID Description Score Start End GO Terms
AF-G9PV77-F1-model_v4 deleted 0.9747 150 220
AF-A0A2W4KCI8-F1-model_v4 deleted 0.9706 183 329
AF-L8M9P8-F1-model_v4 WYL domain-containing protein 0.9505 200 327
AF-A0A2M8N575-F1-model_v4 WYL domain-containing protein 0.9488 153 221
AF-A0A7C2SAJ0-F1-model_v4 WYL domain-containing protein 0.9484 153 219

Feature Viewer

pLDDT pTM Quality
75.73 0.51 Medium
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Predicted Structure (AlphaFold2)

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