F254064

General Info

Members Datasets Scaffolds Average Seq Length
169 115 338 261

Family's Representative Sequence

Representative Sequence 3300005336|Ga0070680_100186569|Ga0070680_1001865692
Length 317
Sequence MQQNSQRGRMSMIPCAFSTIVTFVRTTPCYNARDFLGHEYTQTDPAPAGIHRRNEMDLQLQGKVALVAAGSKGLGRAVATGLAREGARVALFSRDAERINATADEITAETGADVLPLVADVMHPDQITAAIDATVKRFGRLDVLVTNAGGPPPGSFETVSDADFVNAIELNLLSTIRLCRAAVPHMKANGGSIVTITSISVKQPLQDLILSNTARSGVLGLVKSMANELGKYNIRVNNVGPGPTRTDRILNLARARAERDQIPLEDALTESAMGIPLGRLGEPEEFANAVVFLASPAASYISGQTLLIDGGAYAGTL

Samples

Sample ID Description Type Environment
1 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
40 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
69 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
74 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
75 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
76 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
80 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
81 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
82 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
83 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
84 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
85 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
86 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
87 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
88 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
89 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
92 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
93 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
94 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
98 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
99 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
103 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
104 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
105 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
106 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
107 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
108 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
109 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
110 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
111 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
112 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
113 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
114 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
115 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.67
Metatranscriptomes 0.59
Isolates 4.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.78
Nodule 0.59
Rhizoplane 0.59
Rhizosphere 77.51
Stem 0
Stem Tuber 0
Unclassified 14.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070680_100186569 3300005336 Bacteria 1747
2 JGI25406J46586_10019768 3300003203 Bacteria 2736
3 rootL2_10014734 3300003322 Bacteria 4665
4 rootL2_10299723 3300003322 Unclassified 1308
5 Ga0055532_1001966 3300003758 Bacteria 4819
6 Ga0070690_100157362 3300005330 Unclassified 1554
7 Ga0070670_100025697 3300005331 Bacteria 5066
8 Ga0068869_100149967 3300005334 Bacteria 1807
9 Ga0070666_10000030 3300005335 Bacteria 137543
10 Ga0070666_10329910 3300005335 Unclassified 1089
11 Ga0068868_100111328 3300005338 Bacteria 2225
12 Ga0070668_100053410 3300005347 Bacteria 3116
13 Ga0070668_100205856 3300005347 Bacteria 1617
14 Ga0070671_100027433 3300005355 Bacteria 4688
15 Ga0070671_100286420 3300005355 Bacteria 1402
16 Ga0070673_100026657 3300005364 Unclassified 4272
17 Ga0070667_100007123 3300005367 Bacteria 9298
18 Ga0070667_100019192 3300005367 Bacteria 5669
19 Ga0070694_100170766 3300005444 Bacteria 1602
20 Ga0070681_10062034 3300005458 Unclassified 3712
21 Ga0070679_100002808 3300005530 Bacteria 15822
22 Ga0070704_100018690 3300005549 Bacteria 4438
23 Ga0068852_100002647 3300005616 Bacteria 12375
24 Ga0068859_100000003 3300005617 Bacteria 479218
25 Ga0068859_100014742 3300005617 Bacteria 7855
26 Ga0068864_100005897 3300005618 Bacteria 10041
27 Ga0068864_100065445 3300005618 Unclassified 3153
28 Ga0068864_100725612 3300005618 Unclassified 972
29 Ga0068851_10010752 3300005834 Bacteria 4277
30 Ga0068863_100011563 3300005841 Bacteria 8537
31 Ga0068863_100012369 3300005841 Bacteria 8242
32 Ga0068858_100008442 3300005842 Bacteria 9903
33 Ga0068860_100002886 3300005843 Bacteria 17826
34 Ga0068860_100019291 3300005843 Bacteria 6618
35 Ga0081539_10000977 3300005985 Bacteria 53347
36 Ga0081539_10012711 3300005985 Bacteria 6445
37 Ga0097621_100002110 3300006237 Bacteria 13621
38 Ga0097621_100033321 3300006237 Bacteria 4101
39 Ga0068871_100048270 3300006358 Unclassified 3436
40 Ga0068871_100064890 3300006358 Bacteria 2990
41 Ga0075428_100116366 3300006844 Bacteria 2912
42 Ga0075431_100047627 3300006847 Unclassified 4419
43 Ga0068865_100037619 3300006881 Bacteria 3269
44 Ga0097620_100000003 3300006931 Bacteria 479218
45 Ga0097620_100014742 3300006931 Bacteria 7855
46 Ga0111539_11030623 3300009094 Bacteria 957
47 Ga0114129_10232631 3300009147 Unclassified 2481
48 Ga0105241_10000831 3300009174 Bacteria 23378
49 Ga0105237_10024777 3300009545 Bacteria 6138
50 Ga0105237_10916114 3300009545 Bacteria 883
51 Ga0105249_10004198 3300009553 Bacteria 12448
52 Ga0105239_10026257 3300010375 Bacteria 6410
53 Ga0105246_10039780 3300011119 Bacteria 3170
54 Ga0105246_10040257 3300011119 Bacteria 3153
55 Ga0157374_10316945 3300013296 Bacteria 1545
56 Ga0157378_10040288 3300013297 Bacteria 4142
57 Ga0157378_10065610 3300013297 Bacteria 3249
58 Ga0157378_10102731 3300013297 Unclassified 2611
59 Ga0157378_10420454 3300013297 Bacteria 1321
60 Ga0163162_10000824 3300013306 Bacteria 28851
61 Ga0157375_10276668 3300013308 Unclassified 1841
62 Ga0157375_10339061 3300013308 Bacteria 1669
63 Ga0157377_10468288 3300014745 Bacteria 874
64 Ga0157379_10036425 3300014968 Bacteria 4387
65 Ga0157379_10162551 3300014968 Bacteria 2015
66 Ga0157379_10245236 3300014968 Bacteria 1625
67 Ga0157376_10002378 3300014969 Bacteria 12704
68 Ga0157376_10338215 3300014969 Bacteria 1437
69 Ga0163161_10056084 3300017792 Bacteria 2861
70 Ga0213876_10124872 3300021384 Unclassified 1367
71 Ga0209147_100042 3300025229 Bacteria 301263
72 Ga0207680_10000014 3300025903 Bacteria 179035
73 Ga0207654_10003212 3300025911 Bacteria 8259
74 Ga0207707_10280716 3300025912 Bacteria 1443
75 Ga0207671_10003727 3300025914 Bacteria 15021
76 Ga0207660_10065546 3300025917 Bacteria 2625
77 Ga0207652_10033243 3300025921 Unclassified 4341
78 Ga0207650_10010774 3300025925 Bacteria 6277
79 Ga0207650_10093872 3300025925 Bacteria 2297
80 Ga0207644_10021985 3300025931 Bacteria 4352
81 Ga0207704_10125109 3300025938 Bacteria 1768
82 Ga0207689_10003533 3300025942 Bacteria 14285
83 Ga0207651_10080138 3300025960 Bacteria 2349
84 Ga0207651_10086458 3300025960 Bacteria 2279
85 Ga0207668_10076183 3300025972 Bacteria 2414
86 Ga0207668_10221256 3300025972 Bacteria 1520
87 Ga0207658_10015598 3300025986 Bacteria 5213
88 Ga0207658_10040835 3300025986 Bacteria 3356
89 Ga0207677_10125468 3300026023 Bacteria 1939
90 Ga0207677_10262054 3300026023 Bacteria 1409
91 Ga0207703_10011545 3300026035 Bacteria 6870
92 Ga0207641_10000015 3300026088 Bacteria 321332
93 Ga0207641_10003543 3300026088 Bacteria 13815
94 Ga0207676_10694977 3300026095 Unclassified 985
95 Ga0207698_10007124 3300026142 Bacteria 7003
96 Ga0268264_10001332 3300028381 Bacteria 23235
97 Ga0268264_10001606 3300028381 Bacteria 20910
98 Ga0307515_10000031 3300028794 Bacteria 358648
99 Ga0265320_10018358 3300031240 Bacteria 3854
100 Ga0265327_10014999 3300031251 Bacteria 5037
101 Ga0307509_10039361 3300031507 Bacteria 5152
102 Ga0307509_10134410 3300031507 Unclassified 2422
103 Ga0307508_10004344 3300031616 Bacteria 13864
104 Ga0307508_10088218 3300031616 Bacteria 2686
105 Ga0316576_10000424 3300031727 Bacteria 19508
106 Ga0316576_10056683 3300031727 Bacteria 2862
107 Ga0316576_10269365 3300031727 Bacteria 1277
108 Ga0316576_10345112 3300031727 Bacteria 1108
109 Ga0316578_10036874 3300031728 Bacteria 2815
110 Ga0316593_10047665 3300032168 Bacteria 1441
111 Ga0316584_0029218 3300036712 Bacteria 4069
112 Ga0316584_0135371 3300036712 Bacteria 1839
113 Ga0395899_0134282 3300037312 Unclassified 1765
114 Ga0395898_0065594 3300037466 Bacteria 3520
115 Ga0400484_13120 3300038725 Bacteria 4553
116 Ga0400484_27919 3300038725 Bacteria 4662
117 Ga0400490_44805 3300038726 Unclassified 4764
118 Ga0400490_53620 3300038726 Bacteria 2238
119 Ga0400491_09043 3300038727 Bacteria 3015
120 Ga0400485_10998 3300038735 Bacteria 17645
121 Ga0400485_21004 3300038735 Bacteria 14422
122 Ga0400488_59780 3300038741 Bacteria 3414
123 Ga0400486_22622 3300038742 Bacteria 8232
124 Ga0400486_23720 3300038742 Bacteria 8222
125 Ga0400486_32996 3300038742 Bacteria 52919
126 Ga0400483_059851 3300039062 Unclassified 1657
127 Ga0400483_113407 3300039062 Bacteria 6008
128 Ga0400483_213826 3300039062 Bacteria 6026
129 Ga0400483_222292 3300039062 Bacteria 27014
130 Ga0400483_248980 3300039062 Bacteria 1236
131 Ga0400489_09926 3300039093 Bacteria 13169
132 Ga0400487_07751 3300039110 Unclassified 1611
133 Ga0400487_56171 3300039110 Bacteria 2279
134 Ga0436365_0403157 3300039437 Bacteria 30073
135 Ga0436365_0671019 3300039437 Unclassified 2304
136 Ga0451577_0000726 3300042876 Bacteria 51060
137 Ga0451577_0003803 3300042876 Bacteria 16434
138 Ga0453684_0000003 3300044712 Bacteria 1481694
139 Ga0453684_0075163 3300044712 Bacteria 4248
140 Ga0453684_0261900 3300044712 Bacteria 1980
141 Ga0495625_0090405 3300046660 Bacteria 2118
142 Ga0495613_0174299 3300046689 Bacteria 1525
143 Ga0496108_0610922 3300048911 Bacteria 950
144 Ga0501033_0024479 3300049570 Unclassified 4554
145 Ga0501034_0008546 3300049571 Bacteria 10807
146 Ga0501034_0011782 3300049571 Bacteria 9049
147 Ga0501038_0279783 3300049574 Bacteria 1314
148 Ga0501068_0111158 3300049584 Bacteria 1704
149 Ga0501069_0266018 3300049585 Bacteria 1002
150 Ga0501076_0308121 3300049592 Bacteria 1299
151 Ga0501080_0083166 3300049742 Bacteria 2974
152 Ga0501080_0163779 3300049742 Bacteria 2053
153 Ga0501081_0332996 3300049743 Bacteria 1117
154 Ga0501044_0083850 3300049823 Bacteria 3222
155 Ga0501044_0096295 3300049823 Unclassified 2981
156 Ga0501044_0769077 3300049823 Bacteria 844
157 nmdc:mga05p37_298815_c1 3300050507 Unclassified 1914
158 nmdc:mga08y16_868892_c1 3300050511 Bacteria 890
159 Ga0500616_0026929 3300053153 Bacteria 3177
160 Ga0501084_0179382 3300054114 Bacteria 1788
161 Ga0530510_0004001 3300061734 Bacteria 10177
162 2511179875 2510917027 Bacteria 5287437
163 2512638581 2512564013 Bacteria 6286191
164 2857461718 2857460504 Bacteria 5194327
165 2857469832 2857465823 Bacteria 6772595
166 2857591833 2857591370 Bacteria 6569758
167 2915601166 2915597211 Bacteria 6475886
168 2915607414 2915606848 Bacteria 6032732
169 2929186306 2929183550 Bacteria 6377511
170 Ga0070680_100186569
171 JGI25406J46586_10019768
172 rootL2_10014734
173 rootL2_10299723
174 Ga0055532_1001966
175 Ga0070690_100157362
176 Ga0070670_100025697
177 Ga0068869_100149967
178 Ga0070666_10000030
179 Ga0070666_10329910
180 Ga0068868_100111328
181 Ga0070668_100053410
182 Ga0070668_100205856
183 Ga0070671_100027433
184 Ga0070671_100286420
185 Ga0070673_100026657
186 Ga0070667_100007123
187 Ga0070667_100019192
188 Ga0070694_100170766
189 Ga0070681_10062034
190 Ga0070679_100002808
191 Ga0070704_100018690
192 Ga0068852_100002647
193 Ga0068859_100000003
194 Ga0068859_100014742
195 Ga0068864_100005897
196 Ga0068864_100065445
197 Ga0068864_100725612
198 Ga0068851_10010752
199 Ga0068863_100011563
200 Ga0068863_100012369
201 Ga0068858_100008442
202 Ga0068860_100002886
203 Ga0068860_100019291
204 Ga0081539_10000977
205 Ga0081539_10012711
206 Ga0097621_100002110
207 Ga0097621_100033321
208 Ga0068871_100048270
209 Ga0068871_100064890
210 Ga0075428_100116366
211 Ga0075431_100047627
212 Ga0068865_100037619
213 Ga0097620_100000003
214 Ga0097620_100014742
215 Ga0111539_11030623
216 Ga0114129_10232631
217 Ga0105241_10000831
218 Ga0105237_10024777
219 Ga0105237_10916114
220 Ga0105249_10004198
221 Ga0105239_10026257
222 Ga0105246_10039780
223 Ga0105246_10040257
224 Ga0157374_10316945
225 Ga0157378_10040288
226 Ga0157378_10065610
227 Ga0157378_10102731
228 Ga0157378_10420454
229 Ga0163162_10000824
230 Ga0157375_10276668
231 Ga0157375_10339061
232 Ga0157377_10468288
233 Ga0157379_10036425
234 Ga0157379_10162551
235 Ga0157379_10245236
236 Ga0157376_10002378
237 Ga0157376_10338215
238 Ga0163161_10056084
239 Ga0213876_10124872
240 Ga0209147_100042
241 Ga0207680_10000014
242 Ga0207654_10003212
243 Ga0207707_10280716
244 Ga0207671_10003727
245 Ga0207660_10065546
246 Ga0207652_10033243
247 Ga0207650_10010774
248 Ga0207650_10093872
249 Ga0207644_10021985
250 Ga0207704_10125109
251 Ga0207689_10003533
252 Ga0207651_10080138
253 Ga0207651_10086458
254 Ga0207668_10076183
255 Ga0207668_10221256
256 Ga0207658_10015598
257 Ga0207658_10040835
258 Ga0207677_10125468
259 Ga0207677_10262054
260 Ga0207703_10011545
261 Ga0207641_10000015
262 Ga0207641_10003543
263 Ga0207676_10694977
264 Ga0207698_10007124
265 Ga0268264_10001332
266 Ga0268264_10001606
267 Ga0307515_10000031
268 Ga0265320_10018358
269 Ga0265327_10014999
270 Ga0307509_10039361
271 Ga0307509_10134410
272 Ga0307508_10004344
273 Ga0307508_10088218
274 Ga0316576_10000424
275 Ga0316576_10056683
276 Ga0316576_10269365
277 Ga0316576_10345112
278 Ga0316578_10036874
279 Ga0316593_10047665
280 Ga0316584_0029218
281 Ga0316584_0135371
282 Ga0395899_0134282
283 Ga0395898_0065594
284 Ga0400484_13120
285 Ga0400484_27919
286 Ga0400490_44805
287 Ga0400490_53620
288 Ga0400491_09043
289 Ga0400485_10998
290 Ga0400485_21004
291 Ga0400488_59780
292 Ga0400486_22622
293 Ga0400486_23720
294 Ga0400486_32996
295 Ga0400483_059851
296 Ga0400483_113407
297 Ga0400483_213826
298 Ga0400483_222292
299 Ga0400483_248980
300 Ga0400489_09926
301 Ga0400487_07751
302 Ga0400487_56171
303 Ga0436365_0403157
304 Ga0436365_0671019
305 Ga0451577_0000726
306 Ga0451577_0003803
307 Ga0453684_0000003
308 Ga0453684_0075163
309 Ga0453684_0261900
310 Ga0495625_0090405
311 Ga0495613_0174299
312 Ga0496108_0610922
313 Ga0501033_0024479
314 Ga0501034_0008546
315 Ga0501034_0011782
316 Ga0501038_0279783
317 Ga0501068_0111158
318 Ga0501069_0266018
319 Ga0501076_0308121
320 Ga0501080_0083166
321 Ga0501080_0163779
322 Ga0501081_0332996
323 Ga0501044_0083850
324 Ga0501044_0096295
325 Ga0501044_0769077
326 nmdc:mga05p37_298815_c1
327 nmdc:mga08y16_868892_c1
328 Ga0500616_0026929
329 Ga0501084_0179382
330 Ga0530510_0004001
331 2511179875
332 2512638581
333 2857461718
334 2857469832
335 2857591833
336 2915601166
337 2915607414
338 2929186306

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

63

257

0.98

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

68

313

0.92

PF08659

KR

KR domain

64

202

0.83

PF23441

58

314

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jhb-assembly1.cif.gz_B-2 crystal structure of nadph and 4-hydroxyphenylpyruvic acid bound aerf from microcystis aeruginosa 0.9732 1 258
6jha-assembly1.cif.gz_B-2 crystal structure of nadph bound aerf from microcystis aeruginosa 0.9666 1 262
8hax-assembly1.cif.gz_A brucella melitensis 7alpha-hydroxysteroid dehydrogenase mutant-i258m/k262t 0.9665 1 256
8hs9-assembly2.cif.gz_E brucella melitensis 7-alpha-hydroxysteroid dehydrogenase mutant:i258m/k262t 0.9664 1 256
8hax-assembly1.cif.gz_D brucella melitensis 7alpha-hydroxysteroid dehydrogenase mutant-i258m/k262t 0.9657 3 256
ID Description Score Start End Superfamily
af_Q6PKH6_18_219_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9726 5 186 3.40.50.720
3ftpC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9623 5 259 3.40.50.720
3ai1A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.955 1 262 3.40.50.720
6ixmB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9549 5 261 3.40.50.720
5jy1D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9549 5 258 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A661UD25-F1-model_v4 3-oxoacyl-ACP reductase 0.9891 1 262
AF-A0A661UD25-F1-model_v4 3-oxoacyl-ACP reductase 0.9853 1 262
AF-A0A6B1CEC0-F1-model_v4 deleted 0.9844 1 262
AF-A0A7Y2FWX9-F1-model_v4 SDR family oxidoreductase 0.9828 87 261
AF-A0A7G1PF30-F1-model_v4 3-oxoacyl-ACP reductase 0.9732 13 262

Map