F255504

General Info

Members Datasets Scaffolds Average Seq Length
169 128 338 283

Family's Representative Sequence

Representative Sequence 3300049568|Ga0501031_0066974|Ga0501031_0066974_445_1413
Length 322
Sequence VIPLSQLPEDRPQGQGFGGTQRIGEVFWFMDSRKTDVESVRAAYAREMMEASGSDDPRLEQAFAEVPREDFVGPGPWRIMGLKSALAGDRYVETPSADPAHLYRNALVALDAEKGINNGEPALHAAWIGAVAPRPGETVSHLGAGTGYYTAILSRLVLPGGDVHAFEIEPELAERARINLAALVNVEVVEGDAASLPLPASDIIYVNAGVVAPPTGWLHALKPGGRLIFPWRPSEDVALSMLVTRRAAGFEAKPLMPSWFIPCIGASFAERGAKLPNRAEARNIRSVWVKAERPPDATATAIIGDVWFSPEPIAETRSSTSG

Samples

Sample ID Description Type Environment
1 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
4 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
5 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
6 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
7 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
8 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
22 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
23 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
27 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
29 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
30 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
31 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
33 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
34 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
43 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
44 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
45 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
46 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
47 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
48 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
49 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
50 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
51 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
52 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
53 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
54 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
55 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
58 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
59 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
60 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
61 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
62 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
63 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
64 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
65 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
66 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
67 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
68 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
69 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
78 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
79 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
80 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
81 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
82 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
83 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
84 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
85 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
87 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
88 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
89 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
90 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
91 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
92 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
93 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
94 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
95 2508501114 Microvirga lotononidis WSM3557 Isolate Nodule
96 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
97 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
98 2617270742 Rhizobium miluonense HAMBI 2971 Isolate Nodule
99 2693429783 Mesorhizobium sp. LCM 4577 Isolate Rhizosphere
100 2693429784 Mesorhizobium sp. LCM 4576 Isolate Rhizosphere
101 2773857925 Microvirga vignae BR3299 Isolate Unclassified
102 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
103 2775507266 Rhizobium tropici PRF 81 Isolate Nodule
104 2818991448 Rhizobium miluonense 1234 Isolate Unclassified
105 2835312727 Microvirga calopogonii CCBAU 65841 Isolate Nodule
106 2838029111 Rhizobium tropici SEMIA 4079 Isolate Nodule
107 2842475841 Rhizobium tropici SEMIA 4059 Isolate Nodule
108 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
109 2842502639 Rhizobium tropici SEMIA 4063 Isolate Nodule
110 2842922631 Pararhizobium sp. R-72066 Isolate Unclassified
111 2857349434 Mesorhizobium sp. M2E.F.Ca.ET.166.01.1.1 Isolate Nodule
112 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
113 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
114 2882456835 Microvirga sp. KLBC 81 Isolate Unclassified
115 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
116 2909042592 Labrys sp. LIt4 Isolate Nodule
117 2919408235 Rhizobium miluonense 3199 Isolate Unclassified
118 2926754445 Agrobacterium radiobacter SLBN-94 Isolate Rhizosphere
119 2958064165 Mesorhizobium sp. SARCC-RB16n Isolate Unclassified
120 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
121 2977942078 Mesorhizobium sp. M2E.F.Ca.ET.209.01.1.1 Isolate Nodule
122 2987636660 Mesorhizobium sp. M2E.F.Ca.ET.154.01.1.1 Isolate Nodule
123 3004203850 Mesorhizobium sp. M2E.F.Ca.ET.219.01.1.1 Isolate Nodule
124 3005416602 Rhizobium sp. P40RR-XXII Isolate Rhizosphere
125 8005314921 Rhizobium sp. P28RR-XV Isolate Rhizosphere
126 8005484373 Rhizobium tropici SARCC-755 Isolate Nodule
127 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
128 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 79.29
Metatranscriptomes 0
Isolates 20.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.43
Nodule 10.65
Rhizoplane 0
Rhizosphere 59.17
Stem 0
Stem Tuber 0
Unclassified 5.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501031_0066974 3300049568 Bacteria 2340
2 JGI24740J21852_10000169 3300001979 Bacteria 26125
3 JGI25155J39150_1000014 3300002704 Bacteria 196159
4 JGI25156J39149_1000037 3300002705 Bacteria 109690
5 JGI25156J39149_1000079 3300002705 Bacteria 73408
6 JGI25162J39368_1000497 3300002737 Bacteria 29860
7 JGI25162J39368_1000992 3300002737 Bacteria 17927
8 JGI25154J39366_1000052 3300002738 Bacteria 120209
9 JGI25157J39369_1000040 3300002741 Bacteria 126165
10 JGI25406J46586_10009380 3300003203 Bacteria 4383
11 JGI25165J46597_1000371 3300003214 Bacteria 50062
12 JGI25165J46597_1000387 3300003214 Bacteria 47369
13 JGI25165J46597_1000462 3300003214 Bacteria 40205
14 rootH2_10220217 3300003320 Bacteria 2612
15 rootL2_10022026 3300003322 Bacteria 7898
16 rootH1_10110627 3300003323 Bacteria 3578
17 rootH1_10132264 3300003323 Bacteria 2443
18 Ga0070709_10077875 3300005434 Bacteria 2156
19 Ga0070681_10077635 3300005458 Unclassified 3278
20 Ga0070681_10454185 3300005458 Bacteria 1194
21 Ga0070699_100253999 3300005518 Unclassified 1571
22 Ga0070679_100300482 3300005530 Bacteria 1556
23 Ga0070665_100139936 3300005548 Bacteria 2424
24 Ga0070665_100343866 3300005548 Bacteria 1497
25 Ga0070704_100048459 3300005549 Bacteria 2974
26 Ga0081539_10000265 3300005985 Bacteria 120457
27 Ga0081539_10002532 3300005985 Bacteria 25506
28 Ga0075365_10313491 3300006038 Bacteria 1104
29 Ga0070716_100025056 3300006173 Bacteria 3179
30 Ga0075369_10019550 3300006186 Bacteria 2766
31 Ga0075435_100063041 3300007076 Bacteria 3010
32 Ga0105238_10008184 3300009551 Bacteria 10458
33 Ga0157370_10278354 3300013104 Unclassified 1546
34 Ga0209435_100027 3300025206 Bacteria 196217
35 Ga0209672_103013 3300025228 Bacteria 3691
36 Ga0209437_100051 3300025233 Bacteria 392523
37 Ga0209437_100060 3300025233 Bacteria 355034
38 Ga0209646_1000086 3300025246 Bacteria 196217
39 Ga0209646_1017548 3300025246 Bacteria 1054
40 Ga0209026_1000082 3300025250 Bacteria 196315
41 Ga0209148_1008933 3300025254 Bacteria 1985
42 Ga0209759_1000063 3300025256 Bacteria 196315
43 Ga0209233_1000095 3300025261 Bacteria 303783
44 Ga0209233_1000190 3300025261 Bacteria 130713
45 Ga0209455_1006990 3300025272 Bacteria 3251
46 Ga0207699_10224946 3300025906 Unclassified 1283
47 Ga0207660_10020164 3300025917 Unclassified 4471
48 Ga0207694_10054320 3300025924 Bacteria 3107
49 Ga0207669_10166857 3300025937 Bacteria 1562
50 Ga0207674_10294972 3300026116 Unclassified 1570
51 Ga0209371_1003106 3300027312 Bacteria 8469
52 Ga0268266_10021491 3300028379 Bacteria 5497
53 Ga0268256_1014517 3300030500 Bacteria 2332
54 Ga0307410_10008883 3300031852 Bacteria 5604
55 Ga0307406_10101477 3300031901 Bacteria 1961
56 Ga0307409_100050882 3300031995 Bacteria 3167
57 Ga0307416_100159389 3300032002 Bacteria 2083
58 Ga0395898_0000840 3300037466 Bacteria 50812
59 Ga0395901_0000132 3300038443 Bacteria 96418
60 Ga0436363_1101227 3300039450 Bacteria 1955
61 Ga0439465_0053483 3300041413 Bacteria 1327
62 Ga0466963_0004974 3300044694 Bacteria 7756
63 Ga0466964_0068842 3300044706 Bacteria 1491
64 Ga0466971_0102955 3300044719 Bacteria 1313
65 Ga0466970_0014248 3300044765 Bacteria 4079
66 Ga0466957_0057731 3300044842 Bacteria 2376
67 Ga0466959_0011033 3300045049 Bacteria 6485
68 Ga0466958_0087360 3300045836 Bacteria 1925
69 Ga0495583_0097847 3300046506 Bacteria 1255
70 Ga0495637_0056070 3300046520 Bacteria 1632
71 Ga0495611_0114904 3300046648 Bacteria 1254
72 Ga0495588_0106513 3300046674 Bacteria 1475
73 Ga0495672_0003531 3300047320 Bacteria 13320
74 Ga0495686_0043325 3300047472 Bacteria 2854
75 Ga0496117_0137251 3300048920 Bacteria 1471
76 Ga0496118_0159994 3300048921 Bacteria 1394
77 Ga0496121_0008192 3300048924 Bacteria 12405
78 Ga0496125_0200699 3300048928 Bacteria 1306
79 Ga0496126_0404642 3300048929 Bacteria 1106
80 Ga0501032_0001447 3300049569 Bacteria 18875
81 Ga0501033_0015917 3300049570 Bacteria 5696
82 Ga0501033_0254078 3300049570 Bacteria 1245
83 Ga0501034_0065995 3300049571 Bacteria 3633
84 Ga0501036_0114061 3300049572 Unclassified 2284
85 Ga0501037_0000274 3300049573 Bacteria 44054
86 Ga0501037_0171338 3300049573 Bacteria 1543
87 Ga0501038_0049923 3300049574 Bacteria 3616
88 Ga0501038_0225707 3300049574 Bacteria 1493
89 Ga0501043_0000008 3300049579 Bacteria 223654
90 Ga0501043_0000446 3300049579 Bacteria 37169
91 Ga0501047_0042780 3300049581 Bacteria 4376
92 Ga0501047_0065049 3300049581 Bacteria 3516
93 Ga0501047_0085444 3300049581 Bacteria 3031
94 Ga0501047_0242446 3300049581 Unclassified 1653
95 Ga0501067_0086617 3300049583 Bacteria 1738
96 Ga0501067_0131074 3300049583 Bacteria 1395
97 Ga0501069_0000028 3300049585 Bacteria 106038
98 Ga0501069_0006999 3300049585 Bacteria 5902
99 Ga0501069_0116265 3300049585 Bacteria 1525
100 Ga0501070_0002621 3300049586 Bacteria 15711
101 Ga0501070_0007356 3300049586 Bacteria 9348
102 Ga0501070_0014619 3300049586 Bacteria 6605
103 Ga0501070_0036175 3300049586 Bacteria 4123
104 Ga0501071_0016114 3300049587 Bacteria 5138
105 Ga0501071_0081313 3300049587 Bacteria 2371
106 Ga0501073_0056857 3300049589 Bacteria 2736
107 Ga0501073_0135923 3300049589 Bacteria 1704
108 Ga0501073_0138664 3300049589 Bacteria 1685
109 Ga0501074_0000362 3300049590 Bacteria 26706
110 Ga0501074_0009910 3300049590 Bacteria 6923
111 Ga0501074_0080124 3300049590 Bacteria 2343
112 Ga0501074_0393620 3300049590 Bacteria 983
113 Ga0501080_0000400 3300049742 Bacteria 33491
114 Ga0501080_0030400 3300049742 Bacteria 5032
115 Ga0501080_0387521 3300049742 Bacteria 1258
116 Ga0501083_0000579 3300049744 Bacteria 23496
117 Ga0501035_0000335 3300049822 Bacteria 54785
118 Ga0501035_0011671 3300049822 Bacteria 8143
119 Ga0501035_0022283 3300049822 Bacteria 5817
120 Ga0501035_0026037 3300049822 Bacteria 5357
121 Ga0501035_0266063 3300049822 Bacteria 1452
122 Ga0501044_0000011 3300049823 Bacteria 257385
123 Ga0501044_0039290 3300049823 Bacteria 4937
124 Ga0501044_0065188 3300049823 Bacteria 3715
125 Ga0501044_0222182 3300049823 Bacteria 1839
126 nmdc:mga0yw44_15474_c1 3300050492 Bacteria 2246
127 nmdc:mga0yw44_462364_c1 3300050492 Bacteria 860
128 nmdc:mga0rr50_92461_c1 3300050513 Bacteria 2358
129 nmdc:mga0sz30_35655_c1 3300050516 Bacteria 2077
130 Ga0500618_006631 3300053125 Bacteria 3378
131 Ga0500642_0291473 3300053130 Unclassified 739
132 Ga0500568_0001156 3300053139 Bacteria 17662
133 Ga0500627_0061484 3300053158 Bacteria 1652
134 Ga0501082_0105791 3300060353 Bacteria 2434
135 2509078611 2508501114 Bacteria 7082538
136 2509117939 2508501123 Bacteria 6283661
137 2616554466 2615840698 Bacteria 7319877
138 2617384829 2617270742 Bacteria 6808054
139 2694632477 2693429783 Bacteria 7019804
140 2694638650 2693429784 Bacteria 7241525
141 2774874849 2773857925 Bacteria 6472445
142 2776259202 2775506901 Bacteria 9631051
143 2778175648 2775507266 Bacteria 7392367
144 2819609356 2818991448 Bacteria 6772224
145 2835313672 2835312727 Bacteria 7413381
146 2838033384 2838029111 Bacteria 6603031
147 2842479950 2842475841 Bacteria 6603183
148 2842483851 2842482326 Bacteria 7212537
149 2842505265 2842502639 Bacteria 6604161
150 2842926774 2842922631 Bacteria 5824079
151 2857351424 2857349434 Bacteria 7926032
152 2857533500 2857531043 Bacteria 6754041
153 2881150906 2881147464 Bacteria 7779814
154 2882459745 2882456835 Bacteria 6863978
155 2894232821 2894232714 Bacteria 8834183
156 2909046018 2909042592 Bacteria 6499737
157 2919410218 2919408235 Bacteria 6149349
158 2926759119 2926754445 Bacteria 5964435
159 2926759857 2926754445 Bacteria 5964435
160 2958069318 2958064165 Bacteria 7158582
161 2968119712 2968117919 Bacteria 6536078
162 2977945244 2977942078 Bacteria 7570577
163 2987638608 2987636660 Bacteria 8088555
164 3004205149 3004203850 Bacteria 7307914
165 3005418961 3005416602 Bacteria 7064308
166 8005318147 8005314921 Bacteria 7072929
167 8005488976 8005484373 Bacteria 6297373
168 8005646057 8005645114 Bacteria 6950293
169 8005682668 8005682033 Bacteria 6726518
170 Ga0501031_0066974
171 JGI24740J21852_10000169
172 JGI25155J39150_1000014
173 JGI25156J39149_1000037
174 JGI25156J39149_1000079
175 JGI25162J39368_1000497
176 JGI25162J39368_1000992
177 JGI25154J39366_1000052
178 JGI25157J39369_1000040
179 JGI25406J46586_10009380
180 JGI25165J46597_1000371
181 JGI25165J46597_1000387
182 JGI25165J46597_1000462
183 rootH2_10220217
184 rootL2_10022026
185 rootH1_10110627
186 rootH1_10132264
187 Ga0070709_10077875
188 Ga0070681_10077635
189 Ga0070681_10454185
190 Ga0070699_100253999
191 Ga0070679_100300482
192 Ga0070665_100139936
193 Ga0070665_100343866
194 Ga0070704_100048459
195 Ga0081539_10000265
196 Ga0081539_10002532
197 Ga0075365_10313491
198 Ga0070716_100025056
199 Ga0075369_10019550
200 Ga0075435_100063041
201 Ga0105238_10008184
202 Ga0157370_10278354
203 Ga0209435_100027
204 Ga0209672_103013
205 Ga0209437_100051
206 Ga0209437_100060
207 Ga0209646_1000086
208 Ga0209646_1017548
209 Ga0209026_1000082
210 Ga0209148_1008933
211 Ga0209759_1000063
212 Ga0209233_1000095
213 Ga0209233_1000190
214 Ga0209455_1006990
215 Ga0207699_10224946
216 Ga0207660_10020164
217 Ga0207694_10054320
218 Ga0207669_10166857
219 Ga0207674_10294972
220 Ga0209371_1003106
221 Ga0268266_10021491
222 Ga0268256_1014517
223 Ga0307410_10008883
224 Ga0307406_10101477
225 Ga0307409_100050882
226 Ga0307416_100159389
227 Ga0395898_0000840
228 Ga0395901_0000132
229 Ga0436363_1101227
230 Ga0439465_0053483
231 Ga0466963_0004974
232 Ga0466964_0068842
233 Ga0466971_0102955
234 Ga0466970_0014248
235 Ga0466957_0057731
236 Ga0466959_0011033
237 Ga0466958_0087360
238 Ga0495583_0097847
239 Ga0495637_0056070
240 Ga0495611_0114904
241 Ga0495588_0106513
242 Ga0495672_0003531
243 Ga0495686_0043325
244 Ga0496117_0137251
245 Ga0496118_0159994
246 Ga0496121_0008192
247 Ga0496125_0200699
248 Ga0496126_0404642
249 Ga0501032_0001447
250 Ga0501033_0015917
251 Ga0501033_0254078
252 Ga0501034_0065995
253 Ga0501036_0114061
254 Ga0501037_0000274
255 Ga0501037_0171338
256 Ga0501038_0049923
257 Ga0501038_0225707
258 Ga0501043_0000008
259 Ga0501043_0000446
260 Ga0501047_0042780
261 Ga0501047_0065049
262 Ga0501047_0085444
263 Ga0501047_0242446
264 Ga0501067_0086617
265 Ga0501067_0131074
266 Ga0501069_0000028
267 Ga0501069_0006999
268 Ga0501069_0116265
269 Ga0501070_0002621
270 Ga0501070_0007356
271 Ga0501070_0014619
272 Ga0501070_0036175
273 Ga0501071_0016114
274 Ga0501071_0081313
275 Ga0501073_0056857
276 Ga0501073_0135923
277 Ga0501073_0138664
278 Ga0501074_0000362
279 Ga0501074_0009910
280 Ga0501074_0080124
281 Ga0501074_0393620
282 Ga0501080_0000400
283 Ga0501080_0030400
284 Ga0501080_0387521
285 Ga0501083_0000579
286 Ga0501035_0000335
287 Ga0501035_0011671
288 Ga0501035_0022283
289 Ga0501035_0026037
290 Ga0501035_0266063
291 Ga0501044_0000011
292 Ga0501044_0039290
293 Ga0501044_0065188
294 Ga0501044_0222182
295 nmdc:mga0yw44_15474_c1
296 nmdc:mga0yw44_462364_c1
297 nmdc:mga0rr50_92461_c1
298 nmdc:mga0sz30_35655_c1
299 Ga0500618_006631
300 Ga0500642_0291473
301 Ga0500568_0001156
302 Ga0500627_0061484
303 Ga0501082_0105791
304 2509078611
305 2509117939
306 2616554466
307 2617384829
308 2694632477
309 2694638650
310 2774874849
311 2776259202
312 2778175648
313 2819609356
314 2835313672
315 2838033384
316 2842479950
317 2842483851
318 2842505265
319 2842926774
320 2857351424
321 2857533500
322 2881150906
323 2882459745
324 2894232821
325 2909046018
326 2919410218
327 2926759119
328 2926759857
329 2958069318
330 2968119712
331 2977945244
332 2987638608
333 3004205149
334 3005418961
335 8005318147
336 8005488976
337 8005646057
338 8005682668

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08241

Methyltransf_11

Methyltransferase domain

140

212

0.9

PF01135

PCMT

Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)

82

267

0.84

PF13649

Methyltransf_25

Methyltransferase domain

139

225

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4o29-assembly1.cif.gz_A protein-l-isoaspartate o-methyltransferase from pyrobaculum aerophilum in complex with s-adenosyl-l-homocysteine 0.9375 38 186
1vbf-assembly1.cif.gz_B crystal structure of protein l-isoaspartate o-methyltransferase homologue from sulfolobus tokodaii 0.9228 38 183
2yxe-assembly1.cif.gz_B crystal structure of l-isoaspartyl protein carboxyl methyltranferase 0.9143 23 192
4l7v-assembly1.cif.gz_A crystal structure of protein l-isoaspartyl-o-methyltransferase of vibrio cholerae 0.9042 42 190
1kr5-assembly1.cif.gz_A crystal structure of human l-isoaspartyl methyltransferase 0.8969 26 189
ID Description Score Start End Superfamily
af_Q4E3J0_145_404_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9501 59 119 3.40.50.150
4o29A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9375 38 186 3.40.50.150
af_F4JZ42_97_383_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9196 51 122 3.40.50.150
af_C7J169_1_82_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9103 45 110 3.40.50.150
4l7vA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9042 42 190 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A1C3XW35-F1-model_v4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 0.9844 47 145 GO:0008168
GO:0032259
AF-A0A440EH27-F1-model_v4 deleted 0.9684 91 236
AF-A0A529FIF8-F1-model_v4 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) (L-isoaspartyl protein carboxyl methyltransferase) (Protein L-isoaspartyl methyltransferase) (Protein-beta-aspartate methyltransferase) 0.9656 2 184 GO:0004719
GO:0005737
GO:0032259
GO:0036211
AF-A0A529UEC2-F1-model_v4 deleted 0.9623 106 236
AF-A0A6N6S9X9-F1-model_v4 Methyltransferase domain-containing protein 0.9598 46 115 GO:0008168
GO:0032259

Map