F256936

General Info

Members Datasets Scaffolds Average Seq Length
170 126 169 266

Family's Representative Sequence

Representative Sequence 3300025939|Ga0207665_10294264|Ga0207665_102942641
Length 276
Sequence VPGHGDWIEQAEVRTQEVETLSDAGWELLDDEARARLAPALAARKLVDFSGPHDWEHSATNLGRTSALEAGPGEGVSARKRTVLPLVEVRAQFELSRAELRDADRGAQDADLSELDKAAHRIAIAENVAVFHGLADATVGIAEASPHAQAKLGEAADAYPRKVAGAVEQLLCSGITGPYGLALGREQYRRVIETAEHGGYPLLEHLRKILEGTIVWAPGVKGAIVLSMRGGDFKFECGQDLAIGYESHDGEAVRLYLEESFSFHVATPEAAVALKP

Samples

Sample ID Description Type Environment
1 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
41 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
64 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
72 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
73 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
74 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
75 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
76 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
77 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
78 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
79 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
80 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
81 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
82 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
83 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
84 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
85 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
86 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
87 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
88 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
89 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
90 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
91 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
92 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
93 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
94 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
95 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
96 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
97 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
98 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
99 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
100 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
101 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
102 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
103 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
104 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
117 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
118 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
119 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
120 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
121 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
122 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
123 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
124 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
125 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
126 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.82
Metatranscriptomes 0.59
Isolates 0.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.76
Nodule 0
Rhizoplane 17.65
Rhizosphere 75.29
Stem 0
Stem Tuber 0
Unclassified 5.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10240267 3300003323 Bacteria 2877
2 Ga0070680_100002513 3300005336 Bacteria 13591
3 Ga0068868_100046820 3300005338 Bacteria 3385
4 Ga0068868_100209982 3300005338 Bacteria 1627
5 Ga0068868_100300157 3300005338 Bacteria 1364
6 Ga0070660_100421895 3300005339 Bacteria 1105
7 Ga0070691_10178653 3300005341 Bacteria 1104
8 Ga0070692_10083238 3300005345 Bacteria 1727
9 Ga0070674_100195615 3300005356 Bacteria 1558
10 Ga0070659_100006632 3300005366 Bacteria 8364
11 Ga0070667_100137630 3300005367 Bacteria 2136
12 Ga0070667_100149037 3300005367 Bacteria 2054
13 Ga0070709_10058426 3300005434 Bacteria 2446
14 Ga0070710_10129901 3300005437 Bacteria 1535
15 Ga0070681_10096431 3300005458 Bacteria 2905
16 Ga0068853_100104356 3300005539 Bacteria 2509
17 Ga0070664_100489790 3300005564 Bacteria 1132
18 Ga0068856_100008964 3300005614 Bacteria 9734
19 Ga0070702_100157895 3300005615 Bacteria 1463
20 Ga0070702_100374717 3300005615 Bacteria 1010
21 Ga0068852_100054717 3300005616 Bacteria 3441
22 Ga0068859_100176905 3300005617 Bacteria 2216
23 Ga0081455_10000308 3300005937 Bacteria 64439
24 Ga0081538_10001194 3300005981 Bacteria 27359
25 Ga0081538_10077035 3300005981 Bacteria 1798
26 Ga0081538_10151186 3300005981 Bacteria 1051
27 Ga0075363_100253449 3300006048 Bacteria 1014
28 Ga0070712_100147965 3300006175 Bacteria 1800
29 Ga0070712_100257605 3300006175 Bacteria 1397
30 Ga0075434_100034784 3300006871 Bacteria 4978
31 Ga0068865_100236121 3300006881 Bacteria 1437
32 Ga0097620_100176903 3300006931 Bacteria 2216
33 Ga0075435_100302890 3300007076 Bacteria 1367
34 Ga0105240_10083565 3300009093 Bacteria 3917
35 Ga0111539_10119109 3300009094 Bacteria 3094
36 Ga0105245_10079335 3300009098 Bacteria 2997
37 Ga0105245_10092741 3300009098 Bacteria 2782
38 Ga0105243_10034898 3300009148 Bacteria 3898
39 Ga0105237_10000501 3300009545 Bacteria 55515
40 Ga0105237_10757435 3300009545 Bacteria 978
41 Ga0105238_10097136 3300009551 Bacteria 2932
42 Ga0105249_10115803 3300009553 Bacteria 2540
43 Ga0105246_10146148 3300011119 Bacteria 1784
44 Ga0157372_10397986 3300013307 Bacteria 1605
45 Ga0157372_10643526 3300013307 Bacteria 1235
46 Ga0157375_10839429 3300013308 Bacteria 1066
47 Ga0163163_10091209 3300014325 Bacteria 3061
48 Ga0157376_10173902 3300014969 Bacteria 1963
49 Ga0213874_10007668 3300021377 Bacteria 2600
50 Ga0224712_10093617 3300022467 Bacteria 1263
51 Ga0207656_10016220 3300025321 Bacteria 2898
52 Ga0207688_10096241 3300025901 Bacteria 1705
53 Ga0207695_10385467 3300025913 Bacteria 1287
54 Ga0207671_10002378 3300025914 Bacteria 20219
55 Ga0207693_10224341 3300025915 Bacteria 1476
56 Ga0207657_10146308 3300025919 Bacteria 1927
57 Ga0207652_10118049 3300025921 Bacteria 2357
58 Ga0207652_10295549 3300025921 Bacteria 1462
59 Ga0207690_10034707 3300025932 Bacteria 3252
60 Ga0207706_10056664 3300025933 Bacteria 3455
61 Ga0207709_10524469 3300025935 Bacteria 928
62 Ga0207665_10294264 3300025939 Bacteria 1212
63 Ga0207691_10065664 3300025940 Bacteria 3283
64 Ga0207711_10298955 3300025941 Bacteria 1484
65 Ga0207689_10079668 3300025942 Bacteria 2692
66 Ga0207679_10301334 3300025945 Bacteria 1382
67 Ga0207640_10054430 3300025981 Bacteria 2616
68 Ga0207677_10190745 3300026023 Bacteria 1621
69 Ga0207648_10331192 3300026089 Bacteria 1370
70 Ga0207674_10250717 3300026116 Bacteria 1717
71 Ga0209371_1006539 3300027312 Bacteria 4291
72 Ga0268264_10477226 3300028381 Bacteria 1212
73 Ga0265313_10073061 3300031595 Bacteria 1575
74 Ga0373937_0409624 3300036401 Bacteria 1286
75 Ga0395899_0005242 3300037312 Bacteria 10076
76 Ga0395900_0056067 3300037418 Unclassified 4057
77 Ga0395900_0075069 3300037418 Bacteria 3475
78 Ga0395898_0036692 3300037466 Bacteria 4866
79 Ga0395898_0085227 3300037466 Unclassified 3045
80 Ga0395905_0250239 3300037471 Bacteria 1655
81 Ga0436364_1219229 3300037853 Bacteria 4585
82 Ga0395901_0001878 3300038443 Bacteria 21664
83 Ga0395901_0082725 3300038443 Bacteria 3354
84 Ga0395901_0105549 3300038443 Bacteria 2957
85 Ga0395901_0326158 3300038443 Bacteria 1588
86 Ga0436365_0759179 3300039437 Bacteria 8029
87 Ga0436365_0829563 3300039437 Bacteria 4849
88 Ga0436365_1527914 3300039437 Bacteria 1154
89 Ga0436361_0379949 3300039447 Bacteria 2072
90 Ga0436363_1355308 3300039450 Bacteria 1118
91 Ga0436363_1674390 3300039450 Bacteria 51173
92 Ga0436362_1263123 3300039453 Bacteria 1874
93 Ga0466966_0010161 3300044684 Bacteria 6243
94 Ga0466966_0080047 3300044684 Bacteria 2036
95 Ga0466961_0018163 3300044693 Bacteria 4522
96 Ga0466963_0099679 3300044694 Bacteria 1987
97 Ga0466963_0120257 3300044694 Bacteria 1807
98 Ga0466963_0135204 3300044694 Bacteria 1705
99 Ga0466971_0019480 3300044719 Bacteria 3014
100 Ga0466971_0084615 3300044719 Bacteria 1448
101 Ga0466968_0001384 3300044735 Bacteria 8676
102 Ga0466968_0021181 3300044735 Bacteria 2631
103 Ga0466970_0101145 3300044765 Unclassified 1570
104 Ga0466970_0118349 3300044765 Bacteria 1450
105 Ga0466957_0011420 3300044842 Bacteria 5125
106 Ga0466959_0023410 3300045049 Bacteria 4570
107 Ga0466959_0059455 3300045049 Bacteria 2783
108 Ga0466959_0153989 3300045049 Unclassified 1619
109 Ga0466959_0183561 3300045049 Bacteria 1462
110 Ga0451576_1229090 3300045051 Bacteria 782
111 Ga0466958_0017736 3300045836 Bacteria 4122
112 Ga0466967_0400674 3300045976 Bacteria 1335
113 Ga0495592_0261853 3300046454 Bacteria 1139
114 Ga0495647_0000004 3300046681 Bacteria 140700
115 Ga0495624_0131416 3300046690 Bacteria 1535
116 Ga0495674_0367712 3300047319 Bacteria 1165
117 Ga0495676_0080307 3300047321 Bacteria 2477
118 Ga0496100_0006430 3300048903 Bacteria 6406
119 Ga0496100_0066004 3300048903 Bacteria 2399
120 Ga0496101_0000889 3300048904 Bacteria 17599
121 Ga0496102_0207071 3300048905 Bacteria 1849
122 Ga0496102_0332694 3300048905 Bacteria 1430
123 Ga0496102_0829545 3300048905 Bacteria 847
124 Ga0496103_0080723 3300048906 Bacteria 2045
125 Ga0496103_0181147 3300048906 Bacteria 1354
126 Ga0496104_0338166 3300048907 Bacteria 1418
127 Ga0496105_0353401 3300048908 Bacteria 1173
128 Ga0496106_0002646 3300048909 Bacteria 13322
129 Ga0496106_0054793 3300048909 Bacteria 3013
130 Ga0496107_0001253 3300048910 Bacteria 15541
131 Ga0496108_0133403 3300048911 Bacteria 2135
132 Ga0496108_0146372 3300048911 Bacteria 2037
133 Ga0496108_0191335 3300048911 Bacteria 1773
134 Ga0496109_0103336 3300048912 Bacteria 2645
135 Ga0496109_0444346 3300048912 Bacteria 1225
136 Ga0496110_0072786 3300048913 Bacteria 3050
137 Ga0496111_0160259 3300048914 Bacteria 1670
138 Ga0496112_0010082 3300048915 Bacteria 8556
139 Ga0496112_0194154 3300048915 Bacteria 1991
140 Ga0496112_0349299 3300048915 Bacteria 1421
141 Ga0496112_0471803 3300048915 Bacteria 1192
142 Ga0496113_0112544 3300048916 Bacteria 2120
143 Ga0496113_0184770 3300048916 Bacteria 1653
144 Ga0496113_0353390 3300048916 Bacteria 1179
145 Ga0496114_0008548 3300048917 Bacteria 8115
146 Ga0496115_0000101 3300048918 Bacteria 80831
147 Ga0496115_0000326 3300048918 Bacteria 40653
148 Ga0501032_0002635 3300049569 Bacteria 14006
149 Ga0501033_0075951 3300049570 Bacteria 2466
150 Ga0501036_0426531 3300049572 Bacteria 1105
151 Ga0501043_0000953 3300049579 Bacteria 25644
152 Ga0501046_0009692 3300049580 Bacteria 8307
153 Ga0501047_0320264 3300049581 Bacteria 1390
154 Ga0501070_0133929 3300049586 Bacteria 2046
155 Ga0501073_0196868 3300049589 Bacteria 1393
156 Ga0501083_0184833 3300049744 Bacteria 1360
157 Ga0501044_0027635 3300049823 Bacteria 5992
158 nmdc:mga0qj67_401327_c1 3300050509 Bacteria 1106
159 nmdc:mga0rr50_202605_c1 3300050513 Bacteria 1631
160 Ga0495601_0053327 3300053077 Unclassified 2556
161 Ga0495601_0154228 3300053077 Bacteria 1500
162 Ga0495612_0000236 3300053078 Bacteria 23250
163 Ga0495595_0015131 3300053084 Bacteria 3287
164 Ga0495619_0103006 3300053085 Unclassified 1944
165 Ga0500568_0041396 3300053139 Bacteria 1851
166 Ga0500616_0001102 3300053153 Bacteria 27963
167 Ga0501084_0005740 3300054114 Bacteria 10203
168 Ga0466962_0041674 3300061719 Bacteria 2197
169 Ga0466962_0054036 3300061719 Bacteria 1919

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045051 Ga0451576_1229090 Ga0451576_1229090_10_762 250
2 3300045976 Ga0466967_0400674 Ga0466967_0400674_467_1267 254
3 3300005336 Ga0070680_100002513 Ga0070680_1000025134 255
4 3300005339 Ga0070660_100421895 Ga0070660_1004218952 255
5 3300005341 Ga0070691_10178653 Ga0070691_101786532 255
6 3300005458 Ga0070681_10096431 Ga0070681_100964313 255
7 3300005539 Ga0068853_100104356 Ga0068853_1001043564 255
8 3300005614 Ga0068856_100008964 Ga0068856_10000896412 255
9 3300009551 Ga0105238_10097136 Ga0105238_100971364 255
10 3300013307 Ga0157372_10397986 Ga0157372_103979862 255
11 3300022467 Ga0224712_10093617 Ga0224712_100936172 255
12 3300025919 Ga0207657_10146308 Ga0207657_101463082 255
13 3300025981 Ga0207640_10054430 Ga0207640_100544304 255
14 3300044684 Ga0466966_0080047 Ga0466966_0080047_1131_1943 257
15 3300044693 Ga0466961_0018163 Ga0466961_0018163_1392_2204 257
16 3300045049 Ga0466959_0059455 Ga0466959_0059455_893_1705 257
17 3300048912 Ga0496109_0103336 Ga0496109_0103336_52_852 257
18 3300048915 Ga0496112_0194154 Ga0496112_0194154_642_1442 257
19 3300048916 Ga0496113_0184770 Ga0496113_0184770_519_1319 257
20 3300006175 Ga0070712_100257605 Ga0070712_1002576052 258
21 3300025915 Ga0207693_10224341 Ga0207693_102243412 258
22 3300046690 Ga0495624_0131416 Ga0495624_0131416_25_825 258
23 3300047321 Ga0495676_0080307 Ga0495676_0080307_1143_1943 258
24 iso_pu_bacteria 2643221632 2644182654 261
25 3300039447 Ga0436361_0379949 Ga0436361_0379949_283_1080 263
26 3300049569 Ga0501032_0002635 Ga0501032_0002635_5485_6279 263
27 3300049570 Ga0501033_0075951 Ga0501033_0075951_402_1196 263
28 3300049572 Ga0501036_0426531 Ga0501036_0426531_15_809 263
29 3300049579 Ga0501043_0000953 Ga0501043_0000953_24572_25366 263
30 3300049580 Ga0501046_0009692 Ga0501046_0009692_1200_1994 263
31 3300049581 Ga0501047_0320264 Ga0501047_0320264_57_851 263
32 3300049586 Ga0501070_0133929 Ga0501070_0133929_1002_1796 263
33 3300049589 Ga0501073_0196868 Ga0501073_0196868_560_1354 263
34 3300049744 Ga0501083_0184833 Ga0501083_0184833_250_1044 263
35 3300049823 Ga0501044_0027635 Ga0501044_0027635_2337_3131 263
36 3300054114 Ga0501084_0005740 Ga0501084_0005740_108_902 263
37 3300005345 Ga0070692_10083238 Ga0070692_100832382 264
38 3300005366 Ga0070659_100006632 Ga0070659_1000066329 264
39 3300005981 Ga0081538_10077035 Ga0081538_100770352 264
40 3300009093 Ga0105240_10083565 Ga0105240_100835654 264
41 3300009545 Ga0105237_10757435 Ga0105237_107574352 264
42 3300021377 Ga0213874_10007668 Ga0213874_100076682 264
43 3300025913 Ga0207695_10385467 Ga0207695_103854671 264
44 3300025921 Ga0207652_10118049 Ga0207652_101180493 264
45 3300025921 Ga0207652_10295549 Ga0207652_102955492 264
46 3300025932 Ga0207690_10034707 Ga0207690_100347074 264
47 3300025939 Ga0207665_10294264 Ga0207665_102942641 264
48 3300026116 Ga0207674_10250717 Ga0207674_102507173 264
49 3300031595 Ga0265313_10073061 Ga0265313_100730612 264
50 3300039437 Ga0436365_0759179 Ga0436365_0759179_2886_3686 264
51 3300039437 Ga0436365_0829563 Ga0436365_0829563_2417_3220 264
52 3300039450 Ga0436363_1355308 Ga0436363_1355308_216_1016 264
53 3300039450 Ga0436363_1674390 Ga0436363_1674390_111_914 264
54 3300039453 Ga0436362_1263123 Ga0436362_1263123_434_1237 264
55 3300044684 Ga0466966_0010161 Ga0466966_0010161_2423_3223 264
56 3300044694 Ga0466963_0099679 Ga0466963_0099679_977_1777 264
57 3300044719 Ga0466971_0019480 Ga0466971_0019480_1244_2044 264
58 3300044719 Ga0466971_0084615 Ga0466971_0084615_199_999 264
59 3300044735 Ga0466968_0001384 Ga0466968_0001384_7329_8129 264
60 3300044735 Ga0466968_0021181 Ga0466968_0021181_1630_2430 264
61 3300044765 Ga0466970_0101145 Ga0466970_0101145_17_817 264
62 3300044765 Ga0466970_0118349 Ga0466970_0118349_560_1360 264
63 3300044842 Ga0466957_0011420 Ga0466957_0011420_3522_4322 264
64 3300045049 Ga0466959_0023410 Ga0466959_0023410_2824_3624 264
65 3300045049 Ga0466959_0153989 Ga0466959_0153989_452_1252 264
66 3300045049 Ga0466959_0183561 Ga0466959_0183561_516_1316 264
67 3300045836 Ga0466958_0017736 Ga0466958_0017736_1771_2571 264
68 3300046681 Ga0495647_0000004 Ga0495647_0000004_106106_106906 264
69 3300048912 Ga0496109_0444346 Ga0496109_0444346_294_1094 264
70 3300048916 Ga0496113_0353390 Ga0496113_0353390_226_1026 264
71 3300053139 Ga0500568_0041396 Ga0500568_0041396_995_1795 264
72 3300053153 Ga0500616_0001102 Ga0500616_0001102_23992_24792 264
73 3300061719 Ga0466962_0041674 Ga0466962_0041674_998_1798 264
74 3300061719 Ga0466962_0054036 Ga0466962_0054036_361_1161 264
75 3300005338 Ga0068868_100046820 Ga0068868_1000468202 265
76 3300005338 Ga0068868_100209982 Ga0068868_1002099821 265
77 3300005356 Ga0070674_100195615 Ga0070674_1001956153 265
78 3300005367 Ga0070667_100137630 Ga0070667_1001376303 265
79 3300005615 Ga0070702_100157895 Ga0070702_1001578951 265
80 3300005615 Ga0070702_100374717 Ga0070702_1003747171 265
81 3300005616 Ga0068852_100054717 Ga0068852_1000547174 265
82 3300005617 Ga0068859_100176905 Ga0068859_1001769054 265
83 3300005937 Ga0081455_10000308 Ga0081455_1000030812 265
84 3300005981 Ga0081538_10001194 Ga0081538_1000119434 265
85 3300005981 Ga0081538_10151186 Ga0081538_101511862 265
86 3300006871 Ga0075434_100034784 Ga0075434_1000347847 265
87 3300006881 Ga0068865_100236121 Ga0068865_1002361212 265
88 3300006931 Ga0097620_100176903 Ga0097620_1001769034 265
89 3300007076 Ga0075435_100302890 Ga0075435_1003028903 265
90 3300009098 Ga0105245_10079335 Ga0105245_100793352 265
91 3300009098 Ga0105245_10092741 Ga0105245_100927412 265
92 3300009148 Ga0105243_10034898 Ga0105243_100348982 265
93 3300011119 Ga0105246_10146148 Ga0105246_101461482 265
94 3300014325 Ga0163163_10091209 Ga0163163_100912093 265
95 3300025901 Ga0207688_10096241 Ga0207688_100962412 265
96 3300025935 Ga0207709_10524469 Ga0207709_105244692 265
97 3300026023 Ga0207677_10190745 Ga0207677_101907451 265
98 3300026089 Ga0207648_10331192 Ga0207648_103311921 265
99 3300027312 Ga0209371_1006539 Ga0209371_10065391 265
100 3300028381 Ga0268264_10477226 Ga0268264_104772262 265
101 3300036401 Ga0373937_0409624 Ga0373937_0409624_368_1177 265
102 3300037312 Ga0395899_0005242 Ga0395899_0005242_9233_10036 265
103 3300037418 Ga0395900_0056067 Ga0395900_0056067_451_1254 265
104 3300037418 Ga0395900_0075069 Ga0395900_0075069_807_1610 265
105 3300037466 Ga0395898_0036692 Ga0395898_0036692_1163_1966 265
106 3300037466 Ga0395898_0085227 Ga0395898_0085227_20_823 265
107 3300037471 Ga0395905_0250239 Ga0395905_0250239_789_1592 265
108 3300037853 Ga0436364_1219229 Ga0436364_1219229_229_1035 265
109 3300038443 Ga0395901_0001878 Ga0395901_0001878_16706_17509 265
110 3300038443 Ga0395901_0082725 Ga0395901_0082725_1392_2195 265
111 3300038443 Ga0395901_0105549 Ga0395901_0105549_2101_2904 265
112 3300038443 Ga0395901_0326158 Ga0395901_0326158_601_1404 265
113 3300039437 Ga0436365_1527914 Ga0436365_1527914_147_953 265
114 3300044694 Ga0466963_0120257 Ga0466963_0120257_865_1668 265
115 3300044694 Ga0466963_0135204 Ga0466963_0135204_130_933 265
116 3300046454 Ga0495592_0261853 Ga0495592_0261853_186_989 265
117 3300047319 Ga0495674_0367712 Ga0495674_0367712_251_1060 265
118 3300048903 Ga0496100_0066004 Ga0496100_0066004_1310_2113 265
119 3300048904 Ga0496101_0000889 Ga0496101_0000889_7242_8045 265
120 3300048905 Ga0496102_0207071 Ga0496102_0207071_321_1124 265
121 3300048905 Ga0496102_0332694 Ga0496102_0332694_252_1055 265
122 3300048905 Ga0496102_0829545 Ga0496102_0829545_25_828 265
123 3300048906 Ga0496103_0181147 Ga0496103_0181147_460_1263 265
124 3300048907 Ga0496104_0338166 Ga0496104_0338166_405_1208 265
125 3300048908 Ga0496105_0353401 Ga0496105_0353401_239_1042 265
126 3300048909 Ga0496106_0002646 Ga0496106_0002646_11400_12203 265
127 3300048909 Ga0496106_0054793 Ga0496106_0054793_841_1644 265
128 3300048910 Ga0496107_0001253 Ga0496107_0001253_14041_14844 265
129 3300048911 Ga0496108_0133403 Ga0496108_0133403_908_1711 265
130 3300048911 Ga0496108_0146372 Ga0496108_0146372_510_1313 265
131 3300048911 Ga0496108_0191335 Ga0496108_0191335_632_1435 265
132 3300048913 Ga0496110_0072786 Ga0496110_0072786_1936_2739 265
133 3300048914 Ga0496111_0160259 Ga0496111_0160259_778_1581 265
134 3300048915 Ga0496112_0010082 Ga0496112_0010082_5759_6562 265
135 3300048915 Ga0496112_0349299 Ga0496112_0349299_331_1134 265
136 3300048915 Ga0496112_0471803 Ga0496112_0471803_35_838 265
137 3300048916 Ga0496113_0112544 Ga0496113_0112544_52_855 265
138 3300048917 Ga0496114_0008548 Ga0496114_0008548_2140_2943 265
139 3300050509 nmdc:mga0qj67_401327_c1 nmdc:mga0qj67_401327_c1_171_977 265
140 3300050513 nmdc:mga0rr50_202605_c1 nmdc:mga0rr50_202605_c1_51_854 265
141 3300053077 Ga0495601_0053327 Ga0495601_0053327_1434_2243 265
142 3300053077 Ga0495601_0154228 Ga0495601_0154228_260_1063 265
143 3300053078 Ga0495612_0000236 Ga0495612_0000236_14003_14806 265
144 3300053084 Ga0495595_0015131 Ga0495595_0015131_1652_2461 265
145 3300053085 Ga0495619_0103006 Ga0495619_0103006_302_1111 265
146 3300005338 Ga0068868_100300157 Ga0068868_1003001572 266
147 3300005367 Ga0070667_100149037 Ga0070667_1001490373 266
148 3300005434 Ga0070709_10058426 Ga0070709_100584262 266
149 3300005437 Ga0070710_10129901 Ga0070710_101299012 266
150 3300005564 Ga0070664_100489790 Ga0070664_1004897902 266
151 3300006048 Ga0075363_100253449 Ga0075363_1002534491 266
152 3300006175 Ga0070712_100147965 Ga0070712_1001479651 266
153 3300009094 Ga0111539_10119109 Ga0111539_101191094 266
154 3300009545 Ga0105237_10000501 Ga0105237_100005019 266
155 3300009553 Ga0105249_10115803 Ga0105249_101158033 266
156 3300013307 Ga0157372_10643526 Ga0157372_106435262 266
157 3300013308 Ga0157375_10839429 Ga0157375_108394291 266
158 3300014969 Ga0157376_10173902 Ga0157376_101739022 266
159 3300025321 Ga0207656_10016220 Ga0207656_100162204 266
160 3300025914 Ga0207671_10002378 Ga0207671_1000237816 266
161 3300025933 Ga0207706_10056664 Ga0207706_100566643 266
162 3300025940 Ga0207691_10065664 Ga0207691_100656643 266
163 3300025941 Ga0207711_10298955 Ga0207711_102989552 266
164 3300025942 Ga0207689_10079668 Ga0207689_100796682 266
165 3300025945 Ga0207679_10301334 Ga0207679_103013342 266
166 3300048903 Ga0496100_0006430 Ga0496100_0006430_3217_4032 266
167 3300048906 Ga0496103_0080723 Ga0496103_0080723_462_1277 266
168 3300048918 Ga0496115_0000101 Ga0496115_0000101_21690_22505 266
169 3300048918 Ga0496115_0000326 Ga0496115_0000326_24230_25045 266
170 3300003323 rootH1_10240267 rootH1_102402675 267

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04454

Linocin_M18

Encapsulating protein for peroxidase

12

262

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7bcv-assembly1.cif.gz_A brevibacterium linens encapsulin structure 0.9258 1 265
7boj-assembly1.cif.gz_A cryo-em structure of the encapsulin shell from mycobacterium smegmatis 0.9216 1 265
6i9g-assembly1.cif.gz_A crystal structure of encapsulin from mycolicibacterium hassiacum 0.9212 1 265
8ika-assembly1.cif.gz_A1 cryo-em structure of the encapsulin shell from mycobacterium tuberculosis 0.9199 1 265
7oe2-assembly1.cif.gz_A model of closed pentamer of the haliangium ochraceum encapsulin from symmetry expansion of icosahedral single particle reconstruction 0.9196 1 267
ID Description Score Start End Superfamily
3dktD01 Alpha Beta;2-Layer Sandwich;Major capsid protein gp5 fold; 0.8744 1 255 3.30.2400.30
3dktD01 Alpha Beta;2-Layer Sandwich;Major capsid protein gp5 fold; 0.8696 1 255 3.30.2400.30
3dktA02 Alpha Beta;2-Layer Sandwich;hypothetical protein PF0899 fold;hypothetical protein PF0899 domain 0.8276 146 219 3.30.2320.10
2e0zC01 Alpha Beta;2-Layer Sandwich;Major capsid protein gp5 fold; 0.7396 16 251 3.30.2400.20
2e0zC01 Alpha Beta;2-Layer Sandwich;Major capsid protein gp5 fold; 0.6961 16 251 3.30.2400.20
ID Description Score Start End GO Terms
AF-A0A2S8MKP2-F1-model_v4 deleted 0.9531 161 265
AF-A0A358ZZ48-F1-model_v4 deleted 0.9397 1 267
AF-A0A6P4G5J1-F1-model_v4 deleted 0.936 129 264
AF-A0A3R9WIG2-F1-model_v4 deleted 0.9355 146 265
AF-A0A6I5C4Q7-F1-model_v4 Bacteriocin 0.9337 60 265 GO:0140737

Feature Viewer

pLDDT pTM Quality
90.36 0.85 High
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Predicted Structure (AlphaFold2)

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