F256972

General Info

Members Datasets Scaffolds Average Seq Length
170 102 341 334

Family's Representative Sequence

Representative Sequence 3300026118|Ga0207675_100185267|Ga0207675_1001852673
Length 352
Sequence MQGIGDVKQGKGFIVIDFTNMNSDQQKNIFVTGASGLVGSHLVRALLQQQKKVKALYRNNIPTFDGAENVQWIKGNILDIISVEEAMRNVQQVYHCAAMVSFNPKERKEMNKTNIEGTANVVNECLNAGVEKLLHVSSVSALGRIRQNEIISEKMKWTPETSNSEYGKTKYLAEMEVWRGVGEGLNAVIVNPTIILGAADWNNSSTAIFKNVYKEFPWYTDGTTGFVDVEDLVKAMTMLMESNISKERFILSGANTTYHELFDLIAKAFAKKPPHKKVTPFIAAVVWRLEKIKAALTGKNPLVTKETARTAQAKVQFDNTKLLKYLPAFSYSPLEKSVERICNEFKKIYNLA

Samples

Sample ID Description Type Environment
1 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
46 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
85 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
92 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
93 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
94 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
95 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
96 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
97 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
98 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
99 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
100 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
102 2818991444 Filimonas endophytica 3197 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.41
Metatranscriptomes 0
Isolates 0.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.76
Nodule 0
Rhizoplane 1.76
Rhizosphere 92.35
Stem 0
Stem Tuber 0
Unclassified 5.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207675_100185267 3300026118 Bacteria 1995
2 rootH2_10001429 3300003320 Bacteria 14331
3 rootH2_10208208 3300003320 Bacteria 5364
4 rootL2_10106635 3300003322 Bacteria 2338
5 rootH1_10040787 3300003323 Bacteria 3854
6 rootH1_10076471 3300003316 Bacteria 7886
7 rootH1_10076471 3300003323 Bacteria 4360
8 JGI25160J50197_1001021 3300003354 Bacteria 14503
9 Ga0070658_10016202 3300005327 Bacteria 5963
10 Ga0070658_10101295 3300005327 Bacteria 2381
11 Ga0070658_10197373 3300005327 Bacteria 1697
12 Ga0070670_100120380 3300005331 Bacteria 2264
13 Ga0070666_10277700 3300005335 Bacteria 1190
14 Ga0070680_100047835 3300005336 Bacteria 3484
15 Ga0070682_100000019 3300005337 Bacteria 220844
16 Ga0070682_100002989 3300005337 Bacteria 9381
17 Ga0068868_100009998 3300005338 Bacteria 6856
18 Ga0070660_100001701 3300005339 Bacteria 15090
19 Ga0070660_100035682 3300005339 Bacteria 3764
20 Ga0070661_100103458 3300005344 Bacteria 2121
21 Ga0070675_100125979 3300005354 Bacteria 2179
22 Ga0070673_100012602 3300005364 Bacteria 5810
23 Ga0070659_100041359 3300005366 Bacteria 3603
24 Ga0070667_100013123 3300005367 Bacteria 6850
25 Ga0070678_100060146 3300005456 Unclassified 2795
26 Ga0070678_100182524 3300005456 Bacteria 1719
27 Ga0070662_100006394 3300005457 Bacteria 7592
28 Ga0070681_10050362 3300005458 Bacteria 4156
29 Ga0070681_10106523 3300005458 Bacteria 2745
30 Ga0068867_100329793 3300005459 Bacteria 1267
31 Ga0070679_100000287 3300005530 Bacteria 42861
32 Ga0070679_100007442 3300005530 Bacteria 10230
33 Ga0070679_100046587 3300005530 Bacteria 4321
34 Ga0068853_100015743 3300005539 Bacteria 6211
35 Ga0068853_100085563 3300005539 Bacteria 2764
36 Ga0068853_100151433 3300005539 Bacteria 2088
37 Ga0070672_100376465 3300005543 Bacteria 1214
38 Ga0068855_100031540 3300005563 Bacteria 6329
39 Ga0068855_100068040 3300005563 Bacteria 4147
40 Ga0068857_100017174 3300005577 Bacteria 6339
41 Ga0068856_100008009 3300005614 Bacteria 10315
42 Ga0068856_100209771 3300005614 Bacteria 1963
43 Ga0068852_100001786 3300005616 Bacteria 14607
44 Ga0068852_100005020 3300005616 Bacteria 9408
45 Ga0068852_100010519 3300005616 Bacteria 6920
46 Ga0068859_100245194 3300005617 Bacteria 1881
47 Ga0068864_100053029 3300005618 Bacteria 3497
48 Ga0068864_100137872 3300005618 Bacteria 2198
49 Ga0068851_10091598 3300005834 Bacteria 1601
50 Ga0068858_100302782 3300005842 Bacteria 1525
51 Ga0068860_100001650 3300005843 Bacteria 23869
52 Ga0068862_100005342 3300005844 Bacteria 10761
53 Ga0097621_100000408 3300006237 Bacteria 30010
54 Ga0097621_100021680 3300006237 Bacteria 4975
55 Ga0068871_100001316 3300006358 Bacteria 16589
56 Ga0068871_100023911 3300006358 Bacteria 4734
57 Ga0097620_100245205 3300006931 Bacteria 1881
58 Ga0105240_10000134 3300009093 Bacteria 151778
59 Ga0105240_10030354 3300009093 Bacteria 7026
60 Ga0105241_10006811 3300009174 Bacteria 8400
61 Ga0105241_10314916 3300009174 Bacteria 1347
62 Ga0105242_10047946 3300009176 Unclassified 3470
63 Ga0105248_10169935 3300009177 Bacteria 2457
64 Ga0105237_10006998 3300009545 Bacteria 12429
65 Ga0105237_10007123 3300009545 Bacteria 12288
66 Ga0105249_10030008 3300009553 Bacteria 4912
67 Ga0105239_10001268 3300010375 Bacteria 34104
68 Ga0105239_10013293 3300010375 Bacteria 9147
69 Ga0105239_10020203 3300010375 Bacteria 7347
70 Ga0157373_10000927 3300013100 Bacteria 22674
71 Ga0157373_10010570 3300013100 Bacteria 6791
72 Ga0157371_10003568 3300013102 Bacteria 14024
73 Ga0157371_10020300 3300013102 Bacteria 4891
74 Ga0157371_10093399 3300013102 Bacteria 2132
75 Ga0157371_10120913 3300013102 Bacteria 1862
76 Ga0157371_10215083 3300013102 Bacteria 1380
77 Ga0157370_10001029 3300013104 Bacteria 35080
78 Ga0157370_10359503 3300013104 Bacteria 1342
79 Ga0157370_10391565 3300013104 Bacteria 1279
80 Ga0157369_10027236 3300013105 Bacteria 6338
81 Ga0157369_10048117 3300013105 Bacteria 4627
82 Ga0157374_10143238 3300013296 Bacteria 2321
83 Ga0157378_10046698 3300013297 Bacteria 3849
84 Ga0157378_10057525 3300013297 Bacteria 3465
85 Ga0163162_10002819 3300013306 Bacteria 16526
86 Ga0163162_10005290 3300013306 Bacteria 12454
87 Ga0163162_10043180 3300013306 Bacteria 4514
88 Ga0157372_10007454 3300013307 Bacteria 11637
89 Ga0157372_10011073 3300013307 Bacteria 9597
90 Ga0157372_10024865 3300013307 Bacteria 6509
91 Ga0157372_10109449 3300013307 Bacteria 3164
92 Ga0157372_10117043 3300013307 Unclassified 3056
93 Ga0157372_10143211 3300013307 Bacteria 2756
94 Ga0157372_10150416 3300013307 Bacteria 2687
95 Ga0157375_10000534 3300013308 Bacteria 34107
96 Ga0157375_10035617 3300013308 Bacteria 4753
97 Ga0163163_10000368 3300014325 Bacteria 43257
98 Ga0163163_10132446 3300014325 Bacteria 2533
99 Ga0157377_10123336 3300014745 Bacteria 1573
100 Ga0157379_10009174 3300014968 Bacteria 8618
101 Ga0157379_10017714 3300014968 Bacteria 6276
102 Ga0157376_10000264 3300014969 Bacteria 35812
103 Ga0163161_10000594 3300017792 Bacteria 29004
104 Ga0163161_10015477 3300017792 Bacteria 5318
105 Ga0207426_1000211 3300025302 Bacteria 137322
106 Ga0207680_10308837 3300025903 Bacteria 1104
107 Ga0207705_10019610 3300025909 Bacteria 4835
108 Ga0207654_10171531 3300025911 Bacteria 1409
109 Ga0207707_10091667 3300025912 Bacteria 2656
110 Ga0207707_10200087 3300025912 Bacteria 1742
111 Ga0207695_10000010 3300025913 Bacteria 981919
112 Ga0207695_10016635 3300025913 Bacteria 8597
113 Ga0207657_10001042 3300025919 Bacteria 29332
114 Ga0207657_10004301 3300025919 Bacteria 15090
115 Ga0207652_10009477 3300025921 Bacteria 7828
116 Ga0207652_10046883 3300025921 Bacteria 3690
117 Ga0207706_10063241 3300025933 Bacteria 3258
118 Ga0207711_10144276 3300025941 Unclassified 2144
119 Ga0207679_10289999 3300025945 Bacteria 1406
120 Ga0207667_10023838 3300025949 Bacteria 6735
121 Ga0207667_10043596 3300025949 Bacteria 4760
122 Ga0207667_10062918 3300025949 Bacteria 3879
123 Ga0207640_10230475 3300025981 Bacteria 1424
124 Ga0207658_10052911 3300025986 Bacteria 2998
125 Ga0207677_10084209 3300026023 Bacteria 2291
126 Ga0207703_10172443 3300026035 Bacteria 1904
127 Ga0207639_10016811 3300026041 Bacteria 5182
128 Ga0207639_10022844 3300026041 Unclassified 4510
129 Ga0207639_10128206 3300026041 Bacteria 2096
130 Ga0207639_10272145 3300026041 Bacteria 1486
131 Ga0207702_10015116 3300026078 Bacteria 6400
132 Ga0207641_10022776 3300026088 Bacteria 5158
133 Ga0207676_10024062 3300026095 Bacteria 4503
134 Ga0207676_10313955 3300026095 Bacteria 1436
135 Ga0207674_10027579 3300026116 Bacteria 6005
136 Ga0207675_100285166 3300026118 Bacteria 1605
137 Ga0207698_10024229 3300026142 Bacteria 4256
138 Ga0207698_10133817 3300026142 Unclassified 2123
139 Ga0268264_10001295 3300028381 Bacteria 23620
140 Ga0307515_10000001 3300028794 Bacteria 4259510
141 Ga0265338_10015266 3300028800 Bacteria 8457
142 Ga0265324_10011968 3300029957 Bacteria 3290
143 Ga0265327_10000006 3300031251 Bacteria 693716
144 Ga0265327_10000013 3300031251 Bacteria 519549
145 Ga0265327_10000361 3300031251 Bacteria 86574
146 Ga0265327_10025692 3300031251 Bacteria 3429
147 Ga0395899_0010855 3300037312 Bacteria 6981
148 Ga0395899_0055492 3300037312 Bacteria 2930
149 Ga0395900_0011085 3300037418 Bacteria 9212
150 Ga0395900_0011569 3300037418 Bacteria 9030
151 Ga0395900_0117128 3300037418 Bacteria 2733
152 Ga0395898_0040392 3300037466 Bacteria 4613
153 Ga0395898_0274282 3300037466 Bacteria 1608
154 Ga0395905_0011747 3300037471 Bacteria 8454
155 Ga0395905_0162310 3300037471 Bacteria 2100
156 Ga0395905_0171009 3300037471 Unclassified 2041
157 Ga0395901_0019966 3300038443 Bacteria 6855
158 Ga0395901_0323364 3300038443 Bacteria 1595
159 Ga0439436_0001370 3300041404 Bacteria 7018
160 Ga0466972_0000168 3300044658 Bacteria 51759
161 Ga0466972_0004440 3300044658 Bacteria 7019
162 Ga0466968_0022689 3300044735 Bacteria 2552
163 Ga0495642_0041207 3300046528 Unclassified 1878
164 Ga0495636_0002073 3300047318 Bacteria 7695
165 Ga0495672_0010411 3300047320 Bacteria 6628
166 Ga0496100_0055135 3300048903 Unclassified 2596
167 Ga0496106_0369533 3300048909 Bacteria 1152
168 Ga0496114_0038322 3300048917 Bacteria 3966
169 Ga0501038_0363685 3300049574 Unclassified 1125
170 nmdc:mga0k408_130410_c1 3300050493 Bacteria 1492
171 2819585644 2818991444 Bacteria 6968812
172 Ga0207675_100185267
173 rootH2_10001429
174 rootH2_10208208
175 rootL2_10106635
176 rootH1_10040787
177 rootH1_10076471
178 JGI25160J50197_1001021
179 Ga0070658_10016202
180 Ga0070658_10101295
181 Ga0070658_10197373
182 Ga0070670_100120380
183 Ga0070666_10277700
184 Ga0070680_100047835
185 Ga0070682_100000019
186 Ga0070682_100002989
187 Ga0068868_100009998
188 Ga0070660_100001701
189 Ga0070660_100035682
190 Ga0070661_100103458
191 Ga0070675_100125979
192 Ga0070673_100012602
193 Ga0070659_100041359
194 Ga0070667_100013123
195 Ga0070678_100060146
196 Ga0070678_100182524
197 Ga0070662_100006394
198 Ga0070681_10050362
199 Ga0070681_10106523
200 Ga0068867_100329793
201 Ga0070679_100000287
202 Ga0070679_100007442
203 Ga0070679_100046587
204 Ga0068853_100015743
205 Ga0068853_100085563
206 Ga0068853_100151433
207 Ga0070672_100376465
208 Ga0068855_100031540
209 Ga0068855_100068040
210 Ga0068857_100017174
211 Ga0068856_100008009
212 Ga0068856_100209771
213 Ga0068852_100001786
214 Ga0068852_100005020
215 Ga0068852_100010519
216 Ga0068859_100245194
217 Ga0068864_100053029
218 Ga0068864_100137872
219 Ga0068851_10091598
220 Ga0068858_100302782
221 Ga0068860_100001650
222 Ga0068862_100005342
223 Ga0097621_100000408
224 Ga0097621_100021680
225 Ga0068871_100001316
226 Ga0068871_100023911
227 Ga0097620_100245205
228 Ga0105240_10000134
229 Ga0105240_10030354
230 Ga0105241_10006811
231 Ga0105241_10314916
232 Ga0105242_10047946
233 Ga0105248_10169935
234 Ga0105237_10006998
235 Ga0105237_10007123
236 Ga0105249_10030008
237 Ga0105239_10001268
238 Ga0105239_10013293
239 Ga0105239_10020203
240 Ga0157373_10000927
241 Ga0157373_10010570
242 Ga0157371_10003568
243 Ga0157371_10020300
244 Ga0157371_10093399
245 Ga0157371_10120913
246 Ga0157371_10215083
247 Ga0157370_10001029
248 Ga0157370_10359503
249 Ga0157370_10391565
250 Ga0157369_10027236
251 Ga0157369_10048117
252 Ga0157374_10143238
253 Ga0157378_10046698
254 Ga0157378_10057525
255 Ga0163162_10002819
256 Ga0163162_10005290
257 Ga0163162_10043180
258 Ga0157372_10007454
259 Ga0157372_10011073
260 Ga0157372_10024865
261 Ga0157372_10109449
262 Ga0157372_10117043
263 Ga0157372_10143211
264 Ga0157372_10150416
265 Ga0157375_10000534
266 Ga0157375_10035617
267 Ga0163163_10000368
268 Ga0163163_10132446
269 Ga0157377_10123336
270 Ga0157379_10009174
271 Ga0157379_10017714
272 Ga0157376_10000264
273 Ga0163161_10000594
274 Ga0163161_10015477
275 Ga0207426_1000211
276 Ga0207680_10308837
277 Ga0207705_10019610
278 Ga0207654_10171531
279 Ga0207707_10091667
280 Ga0207707_10200087
281 Ga0207695_10000010
282 Ga0207695_10016635
283 Ga0207657_10001042
284 Ga0207657_10004301
285 Ga0207652_10009477
286 Ga0207652_10046883
287 Ga0207706_10063241
288 Ga0207711_10144276
289 Ga0207679_10289999
290 Ga0207667_10023838
291 Ga0207667_10043596
292 Ga0207667_10062918
293 Ga0207640_10230475
294 Ga0207658_10052911
295 Ga0207677_10084209
296 Ga0207703_10172443
297 Ga0207639_10016811
298 Ga0207639_10022844
299 Ga0207639_10128206
300 Ga0207639_10272145
301 Ga0207702_10015116
302 Ga0207641_10022776
303 Ga0207676_10024062
304 Ga0207676_10313955
305 Ga0207674_10027579
306 Ga0207675_100285166
307 Ga0207698_10024229
308 Ga0207698_10133817
309 Ga0268264_10001295
310 Ga0307515_10000001
311 Ga0265338_10015266
312 Ga0265324_10011968
313 Ga0265327_10000006
314 Ga0265327_10000013
315 Ga0265327_10000361
316 Ga0265327_10025692
317 Ga0395899_0010855
318 Ga0395899_0055492
319 Ga0395900_0011085
320 Ga0395900_0011569
321 Ga0395900_0117128
322 Ga0395898_0040392
323 Ga0395898_0274282
324 Ga0395905_0011747
325 Ga0395905_0162310
326 Ga0395905_0171009
327 Ga0395901_0019966
328 Ga0395901_0323364
329 Ga0439436_0001370
330 Ga0466972_0000168
331 Ga0466972_0004440
332 Ga0466968_0022689
333 Ga0495642_0041207
334 Ga0495636_0002073
335 Ga0495672_0010411
336 Ga0496100_0055135
337 Ga0496106_0369533
338 Ga0496114_0038322
339 Ga0501038_0363685
340 nmdc:mga0k408_130410_c1
341 2819585644

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

29

251

0.87

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

30

235

0.85

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

30

191

0.84

PF04321

RmlD_sub_bind

RmlD substrate binding domain

27

321

0.81

PF07993

NAD_binding_4

Male sterility protein

78

258

0.81

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

29

146

0.8

PF05368

NmrA

NmrA-like family

29

155

0.8

PF13460

NAD_binding_10

NAD(P)H-binding

33

208

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
2x4g-assembly1.cif.gz_A-2 crystal structure of pa4631, a nucleoside-diphosphate-sugar epimerase from pseudomonas aeruginosa 0.8737 7 332
3m2p-assembly1.cif.gz_B the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8725 7 326
3m2p-assembly3.cif.gz_E the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8674 7 326
2x4g-assembly1.cif.gz_A-2 crystal structure of pa4631, a nucleoside-diphosphate-sugar epimerase from pseudomonas aeruginosa 0.8657 7 332
3m2p-assembly1.cif.gz_B the crystal structure of udp-n-acetylglucosamine 4-epimerase from bacillus cereus 0.8628 7 326
ID Description Score Start End Superfamily
af_Q94HG6_1_340_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9116 8 332 3.40.50.720
af_A0A1D6MTK5_41_178_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8998 6 119 3.40.50.720
af_P96816_2_332_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8931 8 329 3.40.50.720
af_Q94HG6_1_340_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8907 8 332 3.40.50.720
2x4gA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8737 7 332 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A4Q3SZP6-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9697 82 328 GO:0004029
GO:0005737
AF-A0A6J4SK18-F1-model_v4 Dihydroflavonol-4-reductase (EC 1.1.1.219) 0.9692 66 328 GO:0004029
GO:0005737
GO:0045552
AF-A0A0M9DQH7-F1-model_v4 NAD-dependent epimerase/dehydratase domain-containing protein 0.9668 7 323 GO:0004029
GO:0005737
AF-A0A3M1BKM0-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9658 123 330 GO:0004029
GO:0005737
AF-A0A4Q3D2R7-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9657 7 328 GO:0004029
GO:0005737

Map