F257529

General Info

Members Datasets Scaffolds Average Seq Length
170 121 340 292

Family's Representative Sequence

Representative Sequence 3300048929|Ga0496126_0006862|Ga0496126_0006862_8254_9189
Length 311
Sequence LPREYAVEVPKPEADADRSAEPANSDFAPTIISWFAANARDLPWRRSGFTAWGTLVSEFMLQQTPVVRVIPRLEEWLERWPTPPALAAVPPGEAVRAWASLGYPRRALALHACAVAITERHGGNVPEDVNALLALPGVGDYTARAVASFAYGHRHPVVDTNVRRVIARAIDGLGEPAPPNAKRDLAAMARLLPEDRADARAFNAGAMELGAIVCTARSPRCDVCPVASSCAWRAAGYPSYDGPRKPVQKRYEGSDRQVRGAILRELRASHIPVSDEELAAVWPDATQRERALSGLLSDGLAVRVDGGYLLP

Samples

Sample ID Description Type Environment
1 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
38 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
39 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
42 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
64 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
65 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
66 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
67 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
68 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
69 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
70 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
73 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
74 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
75 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
76 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
77 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
78 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
79 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
80 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
81 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
82 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
83 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
84 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
85 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
86 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
87 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
88 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
93 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
94 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
95 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
96 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
97 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
98 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
99 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
100 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
101 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
102 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
103 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
104 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
105 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
106 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
107 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
108 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
109 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
110 2643221616 Leifsonia sp. Root227 Isolate Unclassified
111 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
112 2643221649 Leifsonia sp. Root4 Isolate Unclassified
113 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
114 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
115 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
116 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
117 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
118 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
119 2928153084 Leifsonia sp. 563 Isolate Unclassified
120 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
121 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.41
Metatranscriptomes 2.94
Isolates 7.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.29
Nodule 0
Rhizoplane 3.53
Rhizosphere 68.24
Stem 0
Stem Tuber 0.59
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496126_0006862 3300048929 Bacteria 12621
2 JGI24735J21928_10022647 3300002067 Bacteria 1910
3 JGI25164J39214_1000504 3300002772 Bacteria 18881
4 JGI25165J46597_1000002 3300003214 Bacteria 765387
5 Ga0006562J51391_1037234 3300003578 Bacteria 5676
6 Ga0006562J51391_1037236 3300003578 Bacteria 2650
7 Ga0065714_10066705 3300005288 Bacteria 6425
8 Ga0070658_10004717 3300005327 Bacteria 11085
9 Ga0070658_10005308 3300005327 Bacteria 10458
10 Ga0070658_10008275 3300005327 Bacteria 8366
11 Ga0068868_100037922 3300005338 Bacteria 3739
12 Ga0068868_100066899 3300005338 Bacteria 2858
13 Ga0070659_100005170 3300005366 Bacteria 9360
14 Ga0070659_100070828 3300005366 Bacteria 2771
15 Ga0070714_100049141 3300005435 Bacteria 3590
16 Ga0070710_10060220 3300005437 Bacteria 2159
17 Ga0070685_10050263 3300005466 Bacteria 2408
18 Ga0068853_100005169 3300005539 Bacteria 10202
19 Ga0068853_100055709 3300005539 Bacteria 3408
20 Ga0068853_100077613 3300005539 Bacteria 2901
21 Ga0068855_100003100 3300005563 Bacteria 20345
22 Ga0068855_100060691 3300005563 Bacteria 4421
23 Ga0068855_100150096 3300005563 Bacteria 2650
24 Ga0068855_100594926 3300005563 Bacteria 1193
25 Ga0068857_100006075 3300005577 Bacteria 10313
26 Ga0068856_100091903 3300005614 Bacteria 3019
27 Ga0068856_100129127 3300005614 Bacteria 2531
28 Ga0068852_100005464 3300005616 Bacteria 9091
29 Ga0068852_100054571 3300005616 Bacteria 3445
30 Ga0068851_10000005 3300005834 Bacteria 262808
31 Ga0068858_100000058 3300005842 Bacteria 117238
32 Ga0075365_10030437 3300006038 Bacteria 3457
33 Ga0075365_10122777 3300006038 Bacteria 1793
34 Ga0075365_10163243 3300006038 Bacteria 1553
35 Ga0075364_10181603 3300006051 Bacteria 1424
36 Ga0105240_10020926 3300009093 Bacteria 8710
37 Ga0105240_10388675 3300009093 Bacteria 1574
38 Ga0105240_10420860 3300009093 Bacteria 1501
39 Ga0111539_10397892 3300009094 Bacteria 1604
40 Ga0105245_10014394 3300009098 Bacteria 6891
41 Ga0105245_10021443 3300009098 Bacteria 5668
42 Ga0105241_10001714 3300009174 Bacteria 16683
43 Ga0105237_10000222 3300009545 Bacteria 80237
44 Ga0105237_10060526 3300009545 Bacteria 3788
45 Ga0105238_10003263 3300009551 Bacteria 16186
46 Ga0105239_10087649 3300010375 Bacteria 3431
47 Ga0105239_10598757 3300010375 Bacteria 1257
48 Ga0157371_10032657 3300013102 Bacteria 3744
49 Ga0157370_10027753 3300013104 Bacteria 5581
50 Ga0157369_10011196 3300013105 Bacteria 10194
51 Ga0157369_10042910 3300013105 Bacteria 4933
52 Ga0157369_10195336 3300013105 Bacteria 2125
53 Ga0163163_10130821 3300014325 Bacteria 2550
54 Ga0157379_10016739 3300014968 Bacteria 6452
55 Ga0206356_11568970 3300020070 Bacteria 1182
56 Ga0206354_11147604 3300020081 Bacteria 2651
57 Ga0206353_10380611 3300020082 Bacteria 2319
58 Ga0207427_100034 3300025231 Bacteria 320342
59 Ga0209437_100360 3300025233 Bacteria 50855
60 Ga0209677_100720 3300025253 Bacteria 16852
61 Ga0209148_1001534 3300025254 Bacteria 11256
62 Ga0209233_1000001 3300025261 Bacteria 2992747
63 Ga0209455_1006472 3300025272 Bacteria 3450
64 Ga0207656_10000001 3300025321 Bacteria 1323684
65 Ga0207656_10000003 3300025321 Bacteria 771644
66 Ga0207656_10000004 3300025321 Bacteria 632320
67 Ga0207705_10000001 3300025909 Bacteria 2061880
68 Ga0207654_10000003 3300025911 Bacteria 1030378
69 Ga0207654_10251524 3300025911 Bacteria 1185
70 Ga0207695_10009229 3300025913 Bacteria 12223
71 Ga0207695_10056094 3300025913 Bacteria 4102
72 Ga0207695_10075863 3300025913 Bacteria 3420
73 Ga0207671_10000001 3300025914 Bacteria 1318881
74 Ga0207657_10012940 3300025919 Bacteria 8204
75 Ga0207657_10166671 3300025919 Bacteria 1787
76 Ga0207649_10028627 3300025920 Bacteria 3281
77 Ga0207694_10000039 3300025924 Bacteria 186164
78 Ga0207687_10004874 3300025927 Bacteria 8919
79 Ga0207687_10057553 3300025927 Bacteria 2731
80 Ga0207664_10130552 3300025929 Bacteria 2114
81 Ga0207690_10007599 3300025932 Bacteria 6432
82 Ga0207690_10125794 3300025932 Bacteria 1869
83 Ga0207667_10004729 3300025949 Bacteria 16666
84 Ga0207667_10018489 3300025949 Bacteria 7813
85 Ga0207667_10108506 3300025949 Bacteria 2863
86 Ga0207667_10149776 3300025949 Bacteria 2402
87 Ga0207658_10040598 3300025986 Bacteria 3365
88 Ga0207677_10025922 3300026023 Bacteria 3666
89 Ga0207677_10196452 3300026023 Bacteria 1600
90 Ga0207703_10002430 3300026035 Bacteria 16140
91 Ga0207639_10006099 3300026041 Bacteria 8175
92 Ga0207639_10053078 3300026041 Bacteria 3091
93 Ga0207678_10069748 3300026067 Bacteria 3014
94 Ga0207702_10112114 3300026078 Bacteria 2427
95 Ga0207702_10218760 3300026078 Bacteria 1774
96 Ga0207674_10007419 3300026116 Bacteria 12779
97 Ga0207674_10210790 3300026116 Bacteria 1892
98 Ga0207698_10001435 3300026142 Bacteria 13842
99 Ga0207698_10010519 3300026142 Bacteria 5953
100 Ga0307515_10105373 3300028794 Bacteria 3358
101 Ga0307515_10158277 3300028794 Bacteria 2325
102 Ga0307514_10005526 3300031649 Bacteria 11229
103 Ga0395899_0015660 3300037312 Bacteria 5782
104 Ga0400490_19047 3300038726 Bacteria 2199
105 Ga0451793_0385551 3300041452 Bacteria 2358
106 Ga0466965_0027016 3300044683 Bacteria 2783
107 Ga0466966_0075828 3300044684 Bacteria 2100
108 Ga0466961_0033771 3300044693 Bacteria 3287
109 Ga0466963_0257849 3300044694 Bacteria 1224
110 Ga0466970_0032395 3300044765 Bacteria 2761
111 Ga0466970_0061369 3300044765 Bacteria 2014
112 Ga0466957_0149850 3300044842 Bacteria 1508
113 Ga0466960_0029856 3300044901 Bacteria 2504
114 Ga0466959_0018620 3300045049 Bacteria 5099
115 Ga0466959_0211865 3300045049 Bacteria 1346
116 Ga0466958_0045144 3300045836 Bacteria 2657
117 Ga0466967_0061794 3300045976 Bacteria 3324
118 Ga0495650_0001494 3300046471 Bacteria 22300
119 Ga0496102_0541605 3300048905 Bacteria 1087
120 Ga0496104_0276832 3300048907 Bacteria 1591
121 Ga0496104_0845208 3300048907 Bacteria 821
122 Ga0496105_0018586 3300048908 Bacteria 5594
123 Ga0496114_0207066 3300048917 Bacteria 1719
124 Ga0496117_0017814 3300048920 Bacteria 5920
125 Ga0496117_0051568 3300048920 Bacteria 2907
126 Ga0496117_0057829 3300048920 Bacteria 2689
127 Ga0496118_0244452 3300048921 Bacteria 1025
128 Ga0496119_0014946 3300048922 Bacteria 6031
129 Ga0496120_0001306 3300048923 Bacteria 30982
130 Ga0496122_0085574 3300048925 Bacteria 2175
131 Ga0496126_0139893 3300048929 Bacteria 2084
132 Ga0501032_0236011 3300049569 Bacteria 1189
133 Ga0501034_0020557 3300049571 Bacteria 6742
134 Ga0501034_0563495 3300049571 Bacteria 1048
135 Ga0501042_0000338 3300049578 Bacteria 23476
136 Ga0501046_0146716 3300049580 Bacteria 1781
137 Ga0501072_0352524 3300049588 Bacteria 1168
138 Ga0501073_0000150 3300049589 Bacteria 46446
139 Ga0501073_0249891 3300049589 Bacteria 1224
140 Ga0501080_0065416 3300049742 Bacteria 3382
141 Ga0501083_0000250 3300049744 Bacteria 34192
142 Ga0501083_0032046 3300049744 Bacteria 3606
143 nmdc:mga00v17_7124_c1 3300050491 Bacteria 5958
144 nmdc:mga0yw44_8650_c1 3300050492 Bacteria 5086
145 Ga0500635_0000015 3300053080 Bacteria 125195
146 Ga0500643_001374 3300053087 Bacteria 14103
147 Ga0500556_0000775 3300053104 Bacteria 18888
148 Ga0500562_000370 3300053108 Bacteria 10851
149 Ga0500593_001805 3300053117 Bacteria 7690
150 Ga0500559_0001995 3300053136 Bacteria 10974
151 Ga0500559_0002152 3300053136 Bacteria 10475
152 Ga0500568_0000098 3300053139 Bacteria 80393
153 Ga0500568_0033335 3300053139 Bacteria 2114
154 Ga0500573_0000007 3300053140 Bacteria 272970
155 Ga0500616_0000302 3300053153 Bacteria 71543
156 Ga0500620_000175 3300053155 Bacteria 13047
157 Ga0466962_0048162 3300061719 Bacteria 2037
158 2587863192 2585428094 Bacteria 3604039
159 2644095409 2643221616 Bacteria 4066575
160 2644184004 2643221632 Bacteria 3406696
161 2644277236 2643221649 Bacteria 3867359
162 2844841799 2844841374 Bacteria 3917147
163 2857736904 2857733635 Bacteria 3532004
164 2862995546 2862993130 Bacteria 3860849
165 2884764781 2884763398 Bacteria 4091164
166 2919057486 2919055335 Bacteria 3875751
167 2919523852 2919523602 Bacteria 3788128
168 2928156999 2928153084 Bacteria 4020257
169 2966921648 2966921586 Bacteria 3092803
170 8055037072 8055034563 Bacteria 3562128
171 Ga0496126_0006862
172 JGI24735J21928_10022647
173 JGI25164J39214_1000504
174 JGI25165J46597_1000002
175 Ga0006562J51391_1037234
176 Ga0006562J51391_1037236
177 Ga0065714_10066705
178 Ga0070658_10004717
179 Ga0070658_10005308
180 Ga0070658_10008275
181 Ga0068868_100037922
182 Ga0068868_100066899
183 Ga0070659_100005170
184 Ga0070659_100070828
185 Ga0070714_100049141
186 Ga0070710_10060220
187 Ga0070685_10050263
188 Ga0068853_100005169
189 Ga0068853_100055709
190 Ga0068853_100077613
191 Ga0068855_100003100
192 Ga0068855_100060691
193 Ga0068855_100150096
194 Ga0068855_100594926
195 Ga0068857_100006075
196 Ga0068856_100091903
197 Ga0068856_100129127
198 Ga0068852_100005464
199 Ga0068852_100054571
200 Ga0068851_10000005
201 Ga0068858_100000058
202 Ga0075365_10030437
203 Ga0075365_10122777
204 Ga0075365_10163243
205 Ga0075364_10181603
206 Ga0105240_10020926
207 Ga0105240_10388675
208 Ga0105240_10420860
209 Ga0111539_10397892
210 Ga0105245_10014394
211 Ga0105245_10021443
212 Ga0105241_10001714
213 Ga0105237_10000222
214 Ga0105237_10060526
215 Ga0105238_10003263
216 Ga0105239_10087649
217 Ga0105239_10598757
218 Ga0157371_10032657
219 Ga0157370_10027753
220 Ga0157369_10011196
221 Ga0157369_10042910
222 Ga0157369_10195336
223 Ga0163163_10130821
224 Ga0157379_10016739
225 Ga0206356_11568970
226 Ga0206354_11147604
227 Ga0206353_10380611
228 Ga0207427_100034
229 Ga0209437_100360
230 Ga0209677_100720
231 Ga0209148_1001534
232 Ga0209233_1000001
233 Ga0209455_1006472
234 Ga0207656_10000001
235 Ga0207656_10000003
236 Ga0207656_10000004
237 Ga0207705_10000001
238 Ga0207654_10000003
239 Ga0207654_10251524
240 Ga0207695_10009229
241 Ga0207695_10056094
242 Ga0207695_10075863
243 Ga0207671_10000001
244 Ga0207657_10012940
245 Ga0207657_10166671
246 Ga0207649_10028627
247 Ga0207694_10000039
248 Ga0207687_10004874
249 Ga0207687_10057553
250 Ga0207664_10130552
251 Ga0207690_10007599
252 Ga0207690_10125794
253 Ga0207667_10004729
254 Ga0207667_10018489
255 Ga0207667_10108506
256 Ga0207667_10149776
257 Ga0207658_10040598
258 Ga0207677_10025922
259 Ga0207677_10196452
260 Ga0207703_10002430
261 Ga0207639_10006099
262 Ga0207639_10053078
263 Ga0207678_10069748
264 Ga0207702_10112114
265 Ga0207702_10218760
266 Ga0207674_10007419
267 Ga0207674_10210790
268 Ga0207698_10001435
269 Ga0207698_10010519
270 Ga0307515_10105373
271 Ga0307515_10158277
272 Ga0307514_10005526
273 Ga0395899_0015660
274 Ga0400490_19047
275 Ga0451793_0385551
276 Ga0466965_0027016
277 Ga0466966_0075828
278 Ga0466961_0033771
279 Ga0466963_0257849
280 Ga0466970_0032395
281 Ga0466970_0061369
282 Ga0466957_0149850
283 Ga0466960_0029856
284 Ga0466959_0018620
285 Ga0466959_0211865
286 Ga0466958_0045144
287 Ga0466967_0061794
288 Ga0495650_0001494
289 Ga0496102_0541605
290 Ga0496104_0276832
291 Ga0496104_0845208
292 Ga0496105_0018586
293 Ga0496114_0207066
294 Ga0496117_0017814
295 Ga0496117_0051568
296 Ga0496117_0057829
297 Ga0496118_0244452
298 Ga0496119_0014946
299 Ga0496120_0001306
300 Ga0496122_0085574
301 Ga0496126_0139893
302 Ga0501032_0236011
303 Ga0501034_0020557
304 Ga0501034_0563495
305 Ga0501042_0000338
306 Ga0501046_0146716
307 Ga0501072_0352524
308 Ga0501073_0000150
309 Ga0501073_0249891
310 Ga0501080_0065416
311 Ga0501083_0000250
312 Ga0501083_0032046
313 nmdc:mga00v17_7124_c1
314 nmdc:mga0yw44_8650_c1
315 Ga0500635_0000015
316 Ga0500643_001374
317 Ga0500556_0000775
318 Ga0500562_000370
319 Ga0500593_001805
320 Ga0500559_0001995
321 Ga0500559_0002152
322 Ga0500568_0000098
323 Ga0500568_0033335
324 Ga0500573_0000007
325 Ga0500616_0000302
326 Ga0500620_000175
327 Ga0466962_0048162
328 2587863192
329 2644095409
330 2644184004
331 2644277236
332 2844841799
333 2857736904
334 2862995546
335 2884764781
336 2919057486
337 2919523852
338 2928156999
339 2966921648
340 8055037072

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10576

EndIII_4Fe-2S

Iron-sulfur binding domain of endonuclease III

214

230

0.99

PF00730

HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

56

190

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3n5n-assembly2.cif.gz_Y crystal structure analysis of the catalytic domain and interdomain connector of human muty homologue 0.9291 3 211
1rrs-assembly1.cif.gz_A muty adenine glycosylase in complex with dna containing an abasic site 0.9193 4 223
1rrq-assembly1.cif.gz_A muty adenine glycosylase in complex with dna containing an a:oxog pair 0.9187 4 216
5kn9-assembly1.cif.gz_A muty n-terminal domain in complex with dna containing an intrahelical oxog:a base-pair 0.9103 4 216
4yph-assembly1.cif.gz_A crystal structure of muty bound to its anti-substrate with the disulfide cross-linker reduced 0.9089 3 216
ID Description Score Start End Superfamily
af_P9WQ09_31_141_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9839 18 128 1.10.340.30
af_P9WQ09_31_141_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9753 18 128 1.10.340.30
1kg2A02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9661 18 130 1.10.340.30
1kg2A02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9578 18 130 1.10.340.30
1rrqA02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9535 18 130 1.10.340.30
ID Description Score Start End GO Terms
AF-A0A838SLU0-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9859 2 216 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-A0A399NBZ5-F1-model_v4 deleted 0.9856 3 171
AF-A0A6I4P7G2-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9852 5 287 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-A0A522NSI8-F1-model_v4 A/G-specific adenine glycosylase 0.9849 5 287 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051539
AF-A0A2W4L651-F1-model_v4 Adenine DNA glycosylase (EC 3.2.2.31) 0.9808 5 185 GO:0000701
GO:0006284
GO:0006298
GO:0032357
GO:0034039
GO:0035485
GO:0046872
GO:0051536

Map