F259173

General Info

Members Datasets Scaffolds Average Seq Length
171 141 342 386

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0059329|Ga0436365_0059329_8229_9509
Length 426
Sequence MARLGVSFAFACPNAKVSPVTRPLSGIRVIEFSHMVMGPSCGLVLGDLGAEVIKVEPLPQGDNTRRLVGAGAGFFATFNRNKKSLVVDLKSEKGLSLTKKLIARADVVTENFRPGALEALGLGYDAVSADNARLIYCSLKGFLSGPYENRSALDEVVQMMGGLAYMTGPPGRPLRAGTSVNDIMGGMFAAIGILAALHERAQTGKGQLVRSALFENNVFLVAQHMAQFAVTGKPAPPMPARMTAWGIYDVFESKDGEQIFLGVVTDTQWAIFCREFELPMLFADPTLATNAQRVAARERLLPVLRELFLSFTRAEIIERFEKAGLPFAPITKPEDLFEDPHLATPGAMIEVTTQRGNKIEIPALPLEMDGKRLGLRLDVPRLGEHSAAIAAELGYQRELIDELVAEGILGIEEEVSSPPTITNRGA

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
3 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
4 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
25 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
31 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
44 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
45 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
46 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
48 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
70 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
71 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
72 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
73 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
74 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
77 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
78 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
88 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
89 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
90 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
91 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
92 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
93 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
94 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
97 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
98 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
99 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
102 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
105 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
106 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
107 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
108 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
111 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
112 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
113 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
114 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
118 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
119 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
120 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
121 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
123 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
124 2513237351 Mesorhizobium alhagi CCNWXJ12-2 Isolate Nodule
125 2522572158 Azospirillum halopraeferens DSM 3675 Isolate Unclassified
126 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
127 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
128 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
129 2840878972 Albibacillus kandeliae J95 Isolate Rhizosphere
130 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
131 2885312484 Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2 Isolate Nodule
132 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
133 2899259804 Paracoccus aeridis JC501 Isolate Rhizosphere
134 2919114240 Agrobacterium tumefaciens 1457 Isolate Rhizosphere
135 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
136 2935883170 Bradyrhizobium sp. S3.12.5 Isolate Nodule
137 2970524798 Mesorhizobium sp. M5C.F.Ca.ET.164.01.1.1 Isolate Nodule
138 2984568884 Acinetobacter baylyi SORGH_AS893 Isolate Aerial Root
139 3000405567 Rhodobacteraceae bacterium LNNU 3342 Isolate Rhizosphere
140 3007419365 Pseudomonas vanderleydeniana RW8P3 Isolate Unclassified
141 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.89
Metatranscriptomes 0
Isolates 11.11

Biome Distribution

Category Percentage (%)
Aerial Root 0.58
Bulb 0
Endosphere 6.43
Nodule 2.92
Rhizoplane 1.17
Rhizosphere 76.02
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0059329 3300039437 Bacteria 12786
2 Ga0055536_1000154 3300003781 Bacteria 59301
3 Ga0055530_10000171 3300003791 Bacteria 59301
4 Ga0055540_1000214 3300003792 Bacteria 54779
5 Ga0070683_100061875 3300005329 Bacteria 3480
6 Ga0068868_100056756 3300005338 Bacteria 3092
7 Ga0070689_100012490 3300005340 Bacteria 6120
8 Ga0070689_100155546 3300005340 Bacteria 1846
9 Ga0070675_100008925 3300005354 Bacteria 7788
10 Ga0070673_100068981 3300005364 Bacteria 2833
11 Ga0070688_100140244 3300005365 Bacteria 1641
12 Ga0070714_100005075 3300005435 Bacteria 10015
13 Ga0070713_100174888 3300005436 Bacteria 1926
14 Ga0070711_100161886 3300005439 Bacteria 1697
15 Ga0070681_10156342 3300005458 Bacteria 2205
16 Ga0070684_100134203 3300005535 Bacteria 2235
17 Ga0068853_100010681 3300005539 Bacteria 7433
18 Ga0070672_100168492 3300005543 Bacteria 1820
19 Ga0068855_100005456 3300005563 Bacteria 15507
20 Ga0068855_100033614 3300005563 Bacteria 6118
21 Ga0068855_100432993 3300005563 Bacteria 1437
22 Ga0068857_100070047 3300005577 Bacteria 3123
23 Ga0068856_100188246 3300005614 Bacteria 2078
24 Ga0068852_100000428 3300005616 Bacteria 27960
25 Ga0068852_100090085 3300005616 Bacteria 2743
26 Ga0068852_100129754 3300005616 Bacteria 2320
27 Ga0068859_100003330 3300005617 Bacteria 16332
28 Ga0068859_100262787 3300005617 Bacteria 1817
29 Ga0068851_10009961 3300005834 Bacteria 4426
30 Ga0068858_100033267 3300005842 Bacteria 4786
31 Ga0068858_100221591 3300005842 Bacteria 1791
32 Ga0075366_10052198 3300006195 Bacteria 2429
33 Ga0097621_100016795 3300006237 Bacteria 5545
34 Ga0075428_100012811 3300006844 Bacteria 9327
35 Ga0075428_100420076 3300006844 Bacteria 1433
36 Ga0075430_100288616 3300006846 Bacteria 1357
37 Ga0097620_100003330 3300006931 Bacteria 16332
38 Ga0097620_100262796 3300006931 Bacteria 1817
39 Ga0105240_10021262 3300009093 Bacteria 8633
40 Ga0111539_10002041 3300009094 Bacteria 26990
41 Ga0105245_10106236 3300009098 Bacteria 2605
42 Ga0114129_10105314 3300009147 Bacteria 3898
43 Ga0105243_10185791 3300009148 Bacteria 1811
44 Ga0105242_10004888 3300009176 Bacteria 10377
45 Ga0105242_10192430 3300009176 Bacteria 1807
46 Ga0105248_10326936 3300009177 Bacteria 1727
47 Ga0105238_10008024 3300009551 Bacteria 10562
48 Ga0105238_10168768 3300009551 Bacteria 2164
49 Ga0105238_10196194 3300009551 Bacteria 1995
50 Ga0157370_10019091 3300013104 Bacteria 6891
51 Ga0157370_10030955 3300013104 Bacteria 5240
52 Ga0157370_10049789 3300013104 Bacteria 4008
53 Ga0157369_10142426 3300013105 Bacteria 2536
54 Ga0163162_10007845 3300013306 Bacteria 10402
55 Ga0157375_10076916 3300013308 Bacteria 3366
56 Ga0157380_10001653 3300014326 Bacteria 14697
57 Ga0213872_10003271 3300021361 Bacteria 9041
58 Ga0213876_10011401 3300021384 Bacteria 4746
59 Ga0213875_10001069 3300021388 Bacteria 19192
60 Ga0209676_1000147 3300025292 Bacteria 172386
61 Ga0209758_1000125 3300025297 Bacteria 189869
62 Ga0209050_1000062 3300025298 Bacteria 316538
63 Ga0209051_1000409 3300025303 Bacteria 59325
64 Ga0207656_10001195 3300025321 Bacteria 8554
65 Ga0207705_10020573 3300025909 Bacteria 4712
66 Ga0207654_10029953 3300025911 Bacteria 2984
67 Ga0207695_10009199 3300025913 Bacteria 12251
68 Ga0207695_10038722 3300025913 Bacteria 5129
69 Ga0207695_10123179 3300025913 Bacteria 2559
70 Ga0207694_10069198 3300025924 Bacteria 2757
71 Ga0207659_10070477 3300025926 Bacteria 2549
72 Ga0207687_10041251 3300025927 Bacteria 3168
73 Ga0207700_10049009 3300025928 Bacteria 3139
74 Ga0207700_10079071 3300025928 Bacteria 2560
75 Ga0207670_10022507 3300025936 Bacteria 3907
76 Ga0207670_10139549 3300025936 Bacteria 1786
77 Ga0207667_10001525 3300025949 Bacteria 29102
78 Ga0207667_10443071 3300025949 Bacteria 1320
79 Ga0207677_10141947 3300026023 Bacteria 1840
80 Ga0207639_10011388 3300026041 Bacteria 6176
81 Ga0207702_10047232 3300026078 Bacteria 3627
82 Ga0207641_10061273 3300026088 Bacteria 3209
83 Ga0207648_10183264 3300026089 Bacteria 1854
84 Ga0207674_10012611 3300026116 Bacteria 9446
85 Ga0207698_10028610 3300026142 Bacteria 3977
86 Ga0209371_1001522 3300027312 Bacteria 15370
87 Ga0207428_10007899 3300027907 Bacteria 9671
88 Ga0268256_1002796 3300030500 Bacteria 8464
89 Ga0265330_10029307 3300031235 Bacteria 2476
90 Ga0265325_10004680 3300031241 Bacteria 8583
91 Ga0265331_10003794 3300031250 Bacteria 9590
92 Ga0265327_10050503 3300031251 Bacteria 2176
93 Ga0307408_100095743 3300031548 Bacteria 2251
94 Ga0265314_10030924 3300031711 Bacteria 3958
95 Ga0373930_0031067 3300034816 Bacteria 1099
96 Ga0373955_0019955 3300035172 Bacteria 3361
97 Ga0373924_0001793 3300035410 Bacteria 7105
98 Ga0373937_0003897 3300036401 Bacteria 12622
99 Ga0373925_0020220 3300037068 Bacteria 4844
100 Ga0395900_0049520 3300037418 Bacteria 4329
101 Ga0395898_0001206 3300037466 Bacteria 39121
102 Ga0436364_0007847 3300037853 Bacteria 2446
103 Ga0436364_0964915 3300037853 Bacteria 7384
104 Ga0436364_1198632 3300037853 Bacteria 8853
105 Ga0395901_0008625 3300038443 Bacteria 10302
106 Ga0400483_074202 3300039062 Bacteria 4025
107 Ga0400483_282417 3300039062 Bacteria 3623
108 Ga0436365_0140754 3300039437 Bacteria 3326
109 Ga0436361_0096979 3300039447 Bacteria 35943
110 Ga0436361_0662078 3300039447 Bacteria 6607
111 Ga0436363_0354090 3300039450 Bacteria 9873
112 Ga0436363_0912950 3300039450 Bacteria 9571
113 Ga0436362_0027881 3300039453 Bacteria 16485
114 Ga0439438_022899 3300041405 Bacteria 1728
115 Ga0439463_000010 3300042016 Bacteria 43025
116 Ga0450920_004293 3300042122 Bacteria 2497
117 Ga0450905_000189 3300042142 Bacteria 6944
118 Ga0450901_000357 3300042533 Bacteria 5569
119 Ga0439440_0001829 3300042993 Bacteria 3937
120 Ga0495592_0172993 3300046454 Bacteria 1477
121 Ga0495651_0164361 3300046462 Bacteria 1587
122 Ga0495662_0142801 3300046476 Bacteria 1179
123 Ga0495583_0002609 3300046506 Bacteria 15076
124 Ga0495654_0000075 3300046530 Bacteria 113720
125 Ga0495587_0030526 3300046536 Bacteria 3268
126 Ga0495621_0001535 3300046539 Bacteria 6008
127 Ga0495621_0007053 3300046539 Bacteria 3310
128 Ga0495600_0177980 3300046809 Bacteria 1371
129 Ga0496104_0022676 3300048907 Bacteria 5768
130 Ga0496121_0006580 3300048924 Bacteria 14339
131 Ga0496121_0137781 3300048924 Bacteria 1816
132 Ga0496122_0023761 3300048925 Bacteria 5388
133 Ga0496123_0091465 3300048926 Bacteria 1804
134 Ga0501033_0065980 3300049570 Bacteria 2662
135 Ga0501034_0000655 3300049571 Bacteria 53281
136 Ga0501034_0020573 3300049571 Bacteria 6740
137 Ga0501047_0001978 3300049581 Bacteria 19663
138 Ga0501067_0053739 3300049583 Bacteria 2232
139 Ga0501070_0019940 3300049586 Bacteria 5622
140 Ga0501070_0063028 3300049586 Bacteria 3071
141 Ga0501073_0000593 3300049589 Bacteria 25499
142 Ga0501079_0010959 3300049741 Bacteria 6907
143 Ga0501080_0012894 3300049742 Bacteria 7670
144 Ga0501083_0002276 3300049744 Bacteria 13130
145 Ga0501035_0074335 3300049822 Bacteria 3007
146 Ga0501044_0037258 3300049823 Bacteria 5084
147 Ga0501044_0087714 3300049823 Bacteria 3142
148 nmdc:mga03683_7573_c1 3300050489 Bacteria 3776
149 nmdc:mga08y16_742_c1 3300050511 Bacteria 31058
150 Ga0500642_0063190 3300053130 Bacteria 1668
151 Ga0500590_002778 3300053148 Bacteria 7893
152 Ga0501082_0012758 3300060353 Bacteria 7222
153 2513911757 2513237144 Bacteria 7530820
154 2514589787 2513237351 Bacteria 6968952
155 2523106365 2522572158 Bacteria 6514390
156 2599720494 2599185236 Bacteria 6875203
157 2808850521 2808606360 Bacteria 4404006
158 2809034416 2808606395 Bacteria 6020352
159 2840882964 2840878972 Bacteria 5483153
160 2842776469 2842775625 Bacteria 5587290
161 2885318466 2885312484 Bacteria 6415165
162 2894776317 2894772417 Bacteria 5305674
163 2899260637 2899259804 Bacteria 3320927
164 2919119788 2919114240 Bacteria 5700270
165 2929205166 2929199973 Bacteria 7260745
166 2935888614 2935883170 Bacteria 7964738
167 2970528137 2970524798 Bacteria 6840927
168 2984570571 2984568884 Bacteria 3884413
169 3000407880 3000405567 Bacteria 3779330
170 3007423887 3007419365 Bacteria 7026924
171 8055915145 8055909800 Bacteria 7278581
172 Ga0436365_0059329
173 Ga0055536_1000154
174 Ga0055530_10000171
175 Ga0055540_1000214
176 Ga0070683_100061875
177 Ga0068868_100056756
178 Ga0070689_100012490
179 Ga0070689_100155546
180 Ga0070675_100008925
181 Ga0070673_100068981
182 Ga0070688_100140244
183 Ga0070714_100005075
184 Ga0070713_100174888
185 Ga0070711_100161886
186 Ga0070681_10156342
187 Ga0070684_100134203
188 Ga0068853_100010681
189 Ga0070672_100168492
190 Ga0068855_100005456
191 Ga0068855_100033614
192 Ga0068855_100432993
193 Ga0068857_100070047
194 Ga0068856_100188246
195 Ga0068852_100000428
196 Ga0068852_100090085
197 Ga0068852_100129754
198 Ga0068859_100003330
199 Ga0068859_100262787
200 Ga0068851_10009961
201 Ga0068858_100033267
202 Ga0068858_100221591
203 Ga0075366_10052198
204 Ga0097621_100016795
205 Ga0075428_100012811
206 Ga0075428_100420076
207 Ga0075430_100288616
208 Ga0097620_100003330
209 Ga0097620_100262796
210 Ga0105240_10021262
211 Ga0111539_10002041
212 Ga0105245_10106236
213 Ga0114129_10105314
214 Ga0105243_10185791
215 Ga0105242_10004888
216 Ga0105242_10192430
217 Ga0105248_10326936
218 Ga0105238_10008024
219 Ga0105238_10168768
220 Ga0105238_10196194
221 Ga0157370_10019091
222 Ga0157370_10030955
223 Ga0157370_10049789
224 Ga0157369_10142426
225 Ga0163162_10007845
226 Ga0157375_10076916
227 Ga0157380_10001653
228 Ga0213872_10003271
229 Ga0213876_10011401
230 Ga0213875_10001069
231 Ga0209676_1000147
232 Ga0209758_1000125
233 Ga0209050_1000062
234 Ga0209051_1000409
235 Ga0207656_10001195
236 Ga0207705_10020573
237 Ga0207654_10029953
238 Ga0207695_10009199
239 Ga0207695_10038722
240 Ga0207695_10123179
241 Ga0207694_10069198
242 Ga0207659_10070477
243 Ga0207687_10041251
244 Ga0207700_10049009
245 Ga0207700_10079071
246 Ga0207670_10022507
247 Ga0207670_10139549
248 Ga0207667_10001525
249 Ga0207667_10443071
250 Ga0207677_10141947
251 Ga0207639_10011388
252 Ga0207702_10047232
253 Ga0207641_10061273
254 Ga0207648_10183264
255 Ga0207674_10012611
256 Ga0207698_10028610
257 Ga0209371_1001522
258 Ga0207428_10007899
259 Ga0268256_1002796
260 Ga0265330_10029307
261 Ga0265325_10004680
262 Ga0265331_10003794
263 Ga0265327_10050503
264 Ga0307408_100095743
265 Ga0265314_10030924
266 Ga0373930_0031067
267 Ga0373955_0019955
268 Ga0373924_0001793
269 Ga0373937_0003897
270 Ga0373925_0020220
271 Ga0395900_0049520
272 Ga0395898_0001206
273 Ga0436364_0007847
274 Ga0436364_0964915
275 Ga0436364_1198632
276 Ga0395901_0008625
277 Ga0400483_074202
278 Ga0400483_282417
279 Ga0436365_0140754
280 Ga0436361_0096979
281 Ga0436361_0662078
282 Ga0436363_0354090
283 Ga0436363_0912950
284 Ga0436362_0027881
285 Ga0439438_022899
286 Ga0439463_000010
287 Ga0450920_004293
288 Ga0450905_000189
289 Ga0450901_000357
290 Ga0439440_0001829
291 Ga0495592_0172993
292 Ga0495651_0164361
293 Ga0495662_0142801
294 Ga0495583_0002609
295 Ga0495654_0000075
296 Ga0495587_0030526
297 Ga0495621_0001535
298 Ga0495621_0007053
299 Ga0495600_0177980
300 Ga0496104_0022676
301 Ga0496121_0006580
302 Ga0496121_0137781
303 Ga0496122_0023761
304 Ga0496123_0091465
305 Ga0501033_0065980
306 Ga0501034_0000655
307 Ga0501034_0020573
308 Ga0501047_0001978
309 Ga0501067_0053739
310 Ga0501070_0019940
311 Ga0501070_0063028
312 Ga0501073_0000593
313 Ga0501079_0010959
314 Ga0501080_0012894
315 Ga0501083_0002276
316 Ga0501035_0074335
317 Ga0501044_0037258
318 Ga0501044_0087714
319 nmdc:mga03683_7573_c1
320 nmdc:mga08y16_742_c1
321 Ga0500642_0063190
322 Ga0500590_002778
323 Ga0501082_0012758
324 2513911757
325 2514589787
326 2523106365
327 2599720494
328 2808850521
329 2809034416
330 2840882964
331 2842776469
332 2885318466
333 2894776317
334 2899260637
335 2919119788
336 2929205166
337 2935888614
338 2970528137
339 2984570571
340 3000407880
341 3007423887
342 8055915145

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02515

CoA_transf_3

CoA-transferase family III

24

386

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5yit-assembly3.cif.gz_E-2 crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9205 10 373
5yit-assembly2.cif.gz_D crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9172 10 376
5yit-assembly1.cif.gz_B crystal structure of hypothetical protein (rv3272) from mycobacterium tuberculosis 0.9131 10 377
5yx6-assembly1.cif.gz_B crystal structure of rv3272 from m. tuberculosis orthorhombic form 0.9124 10 377
2vjo-assembly1.cif.gz_B formyl-coa transferase mutant variant q17a with aspartyl-coa thioester intermediates and oxalate 0.9121 10 396
ID Description Score Start End Superfamily
af_Q4V9F2_1_227_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9413 31 225 3.40.50.10540
af_Q68FU4_261_348_3.30.1540.10 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9326 231 316 3.30.1540.10
4hl6E02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9309 231 319 3.30.1540.10
4ed9A02 Alpha Beta;2-Layer Sandwich;formyl-coa transferase, domain 3;formyl-coa transferase, domain 3 0.9119 231 319 3.30.1540.10
af_Q9VDL4_46_327_3.40.50.10540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.9072 9 283 3.40.50.10540
ID Description Score Start End GO Terms
AF-A0A529K688-F1-model_v4 CoA transferase 0.9709 5 208 GO:0016740
AF-A0A4Q3N7P7-F1-model_v4 CoA transferase 0.9693 66 398 GO:0008410
AF-A0A6A7KM83-F1-model_v4 CoA transferase 0.9629 2 398 GO:0008410
AF-A0A529K688-F1-model_v4 CoA transferase 0.9616 5 208 GO:0016740
AF-A0A4Q3N7P7-F1-model_v4 CoA transferase 0.958 66 398 GO:0008410

Map