F259376

General Info

Members Datasets Scaffolds Average Seq Length
171 107 342 249

Family's Representative Sequence

Representative Sequence 3300046535|Ga0495586_0047135|Ga0495586_0047135_244_1101
Length 280
Sequence MFREDGQGRFRAGHGRLDASFALSAYCASDMNSDVKDFRLDGQTALITGGGTMAKCFVTSGAKVVLVGRRKEELDKACAALGKSAFALQGDVTKLETASVLVDQAEKLAGPISILVNNAGVHLKKPAAETTDAEFAKVIETHVSGAFALTREAGKRMLARKSGCVLFTASMSALMGIPLIVAYSAAKSAYVGMVRSLATEWGASGVRVNAIAPGWIGSAMLEQALANDAPRKAKILGRIPMGGFGEPDDIGWAAVYLASPAAKYVNGVVLPVDGGAAESF

Samples

Sample ID Description Type Environment
1 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
4 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
17 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
18 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
19 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
20 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
29 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
30 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
31 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
32 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
33 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
34 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
35 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
36 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
37 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
38 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
39 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
40 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
41 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
42 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
43 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
44 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
45 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
46 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
47 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
48 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
49 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
50 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
51 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
52 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
53 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
54 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
55 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
56 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
57 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
58 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
59 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
60 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
64 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
68 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
69 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
70 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
71 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
74 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
75 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
76 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
79 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
80 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
81 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
82 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
83 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
84 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
96 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
97 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
98 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
101 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
102 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
103 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
104 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
105 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
106 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.26
Nodule 0
Rhizoplane 0
Rhizosphere 92.4
Stem 0
Stem Tuber 0
Unclassified 11.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495586_0047135 3300046535 Bacteria 2325
2 rootL2_10027281 3300003322 Bacteria 4648
3 rootL2_10322805 3300003322 Bacteria 3795
4 Ga0070687_100127388 3300005343 Bacteria 1465
5 Ga0070667_100080341 3300005367 Unclassified 2789
6 Ga0070714_100088542 3300005435 Bacteria 2709
7 Ga0070679_100009645 3300005530 Bacteria 9132
8 Ga0070679_100616455 3300005530 Bacteria 1028
9 Ga0068853_100073672 3300005539 Bacteria 2978
10 Ga0068855_100317751 3300005563 Bacteria 1722
11 Ga0068856_100073978 3300005614 Unclassified 3373
12 Ga0068859_100598888 3300005617 Bacteria 1195
13 Ga0068864_100128790 3300005618 Bacteria 2271
14 Ga0081539_10016797 3300005985 Bacteria 5194
15 Ga0070717_10582089 3300006028 Bacteria 1015
16 Ga0075365_10118558 3300006038 Bacteria 1824
17 Ga0097620_100598925 3300006931 Bacteria 1195
18 Ga0105240_10068554 3300009093 Bacteria 4393
19 Ga0105240_10105635 3300009093 Unclassified 3418
20 Ga0105248_10484023 3300009177 Bacteria 1395
21 Ga0105238_10018649 3300009551 Bacteria 7065
22 Ga0105238_10089578 3300009551 Unclassified 3064
23 Ga0105238_10212584 3300009551 Unclassified 1910
24 Ga0157369_10036334 3300013105 Bacteria 5398
25 Ga0207647_10007408 3300025904 Bacteria 7929
26 Ga0207695_10050914 3300025913 Bacteria 4353
27 Ga0207695_10240659 3300025913 Viruses 1711
28 Ga0207652_10044162 3300025921 Bacteria 3796
29 Ga0207652_10058961 3300025921 Bacteria 3308
30 Ga0207694_10041763 3300025924 Bacteria 3535
31 Ga0207694_10146892 3300025924 Unclassified 1898
32 Ga0207650_10123430 3300025925 Bacteria 2019
33 Ga0207664_10047730 3300025929 Bacteria 3365
34 Ga0207658_10157480 3300025986 Unclassified 1858
35 Ga0207702_10050210 3300026078 Unclassified 3521
36 Ga0265337_1007050 3300028556 Unclassified 4248
37 Ga0265326_10001335 3300028558 Bacteria 8748
38 Ga0265326_10045484 3300028558 Bacteria 1245
39 Ga0265319_1004274 3300028563 Bacteria 7116
40 Ga0265334_10015058 3300028573 Unclassified 3216
41 Ga0265318_10000004 3300028577 Bacteria 319325
42 Ga0265318_10002567 3300028577 Bacteria 9626
43 Ga0265318_10002814 3300028577 Bacteria 9091
44 Ga0265338_10000025 3300028800 Bacteria 296972
45 Ga0265338_10000223 3300028800 Bacteria 105618
46 Ga0265338_10002222 3300028800 Bacteria 29586
47 Ga0265338_10002248 3300028800 Bacteria 29389
48 Ga0265338_10006097 3300028800 Bacteria 15478
49 Ga0265338_10007983 3300028800 Bacteria 12954
50 Ga0265324_10006781 3300029957 Unclassified 4727
51 Ga0265324_10026534 3300029957 Bacteria 2050
52 Ga0265332_10014967 3300031238 Bacteria 3430
53 Ga0265332_10090725 3300031238 Bacteria 1292
54 Ga0265320_10004526 3300031240 Bacteria 9102
55 Ga0265320_10096637 3300031240 Bacteria 1364
56 Ga0265325_10037723 3300031241 Unclassified 2553
57 Ga0265340_10012689 3300031247 Unclassified 4447
58 Ga0265316_10110978 3300031344 Bacteria 2077
59 Ga0265316_10256425 3300031344 Bacteria 1283
60 Ga0265313_10002439 3300031595 Bacteria 16049
61 Ga0265313_10014788 3300031595 Bacteria 4588
62 Ga0265313_10029803 3300031595 Bacteria 2817
63 Ga0307508_10000027 3300031616 Bacteria 171013
64 Ga0265314_10002023 3300031711 Bacteria 21514
65 Ga0265314_10033088 3300031711 Unclassified 3796
66 Ga0265342_10057215 3300031712 Unclassified 2308
67 Ga0265342_10104164 3300031712 Bacteria 1613
68 Ga0373928_0000007 3300035084 Bacteria 34132
69 Ga0373929_0000120 3300035085 Bacteria 13038
70 Ga0373940_0014776 3300035088 Bacteria 1910
71 Ga0373944_0001426 3300035089 Bacteria 6027
72 Ga0373951_0001307 3300035091 Bacteria 6580
73 Ga0373932_0000003 3300035112 Bacteria 459351
74 Ga0373945_0000715 3300035116 Bacteria 9660
75 Ga0373954_0022147 3300035118 Bacteria 2880
76 Ga0373956_0096704 3300035119 Bacteria 1366
77 Ga0373943_0102183 3300035170 Bacteria 1501
78 Ga0373942_0006576 3300035207 Bacteria 2686
79 Ga0373962_0000051 3300035242 Bacteria 26574
80 Ga0373931_0000011 3300035691 Bacteria 304643
81 Ga0373935_0027667 3300035692 Bacteria 3505
82 Ga0373927_0008549 3300035695 Bacteria 6884
83 Ga0373927_0084268 3300035695 Bacteria 2061
84 Ga0373927_0158854 3300035695 Bacteria 1481
85 Ga0373927_0405484 3300035695 Bacteria 899
86 Ga0373933_0352342 3300035724 Bacteria 956
87 Ga0373947_0035569 3300035725 Bacteria 2949
88 Ga0373937_0170636 3300036401 Bacteria 2041
89 Ga0373937_0262483 3300036401 Bacteria 1629
90 Ga0373925_0001489 3300037068 Bacteria 20121
91 Ga0373925_0029860 3300037068 Bacteria 3999
92 Ga0395899_0173839 3300037312 Bacteria 1515
93 Ga0395900_0178157 3300037418 Bacteria 2161
94 Ga0395898_0162286 3300037466 Bacteria 2137
95 Ga0395901_0043026 3300038443 Bacteria 4684
96 Ga0439465_0001746 3300041413 Bacteria 7108
97 Ga0439431_0001885 3300041997 Bacteria 4649
98 Ga0439445_0013581 3300042004 Bacteria 1972
99 Ga0439462_0019167 3300042015 Bacteria 1780
100 Ga0439434_0021951 3300042435 Bacteria 1918
101 Ga0451577_0007055 3300042876 Bacteria 11080
102 Ga0451577_0108175 3300042876 Bacteria 2486
103 Ga0453684_0004781 3300044712 Bacteria 27927
104 Ga0453684_0212360 3300044712 Bacteria 2248
105 Ga0451576_0000163 3300045051 Bacteria 170072
106 Ga0451576_0054361 3300045051 Bacteria 4193
107 Ga0451576_0124070 3300045051 Bacteria 2690
108 Ga0451576_0204001 3300045051 Unclassified 2065
109 Ga0451576_0288047 3300045051 Bacteria 1717
110 Ga0495630_0007381 3300046517 Bacteria 7854
111 Ga0495630_0542462 3300046517 Bacteria 892
112 Ga0495586_0286062 3300046535 Bacteria 944
113 Ga0495667_0041900 3300046559 Bacteria 3035
114 Ga0495613_0209908 3300046689 Bacteria 1370
115 Ga0495674_0335912 3300047319 Bacteria 1228
116 Ga0495675_0099695 3300047444 Bacteria 1819
117 Ga0495675_0204328 3300047444 Bacteria 1201
118 Ga0495681_0041830 3300047470 Bacteria 2223
119 Ga0495684_0280748 3300047471 Bacteria 1202
120 Ga0495686_0014138 3300047472 Bacteria 5505
121 Ga0495686_0016994 3300047472 Bacteria 4913
122 Ga0496122_0061272 3300048925 Bacteria 2763
123 Ga0501031_0033030 3300049568 Bacteria 3374
124 Ga0501031_0157916 3300049568 Bacteria 1482
125 Ga0501032_0000907 3300049569 Bacteria 23992
126 Ga0501032_0088014 3300049569 Bacteria 2062
127 Ga0501033_0005314 3300049570 Bacteria 10207
128 Ga0501033_0010178 3300049570 Bacteria 7222
129 Ga0501034_0019392 3300049571 Bacteria 6956
130 Ga0501036_0559394 3300049572 Bacteria 950
131 Ga0501038_0011907 3300049574 Bacteria 7939
132 Ga0501042_0084014 3300049578 Bacteria 2282
133 Ga0501043_0000484 3300049579 Bacteria 35594
134 Ga0501043_0009035 3300049579 Bacteria 7840
135 Ga0501043_0166820 3300049579 Unclassified 1719
136 Ga0501043_0344722 3300049579 Bacteria 1132
137 Ga0501046_0000066 3300049580 Bacteria 115220
138 Ga0501046_0001053 3300049580 Bacteria 26980
139 Ga0501046_0010161 3300049580 Bacteria 8099
140 Ga0501046_0089389 3300049580 Bacteria 2370
141 Ga0501046_0358973 3300049580 Bacteria 1057
142 Ga0501047_0012448 3300049581 Bacteria 8054
143 Ga0501047_0021603 3300049581 Bacteria 6181
144 Ga0501047_0070217 3300049581 Bacteria 3372
145 Ga0501047_0304480 3300049581 Bacteria 1435
146 Ga0501048_0026600 3300049582 Bacteria 4211
147 Ga0501048_0314283 3300049582 Bacteria 1115
148 Ga0501074_0038337 3300049590 Bacteria 3474
149 Ga0501080_0125833 3300049742 Bacteria 2374
150 Ga0501083_0000007 3300049744 Bacteria 198507
151 Ga0501083_0007108 3300049744 Bacteria 7950
152 Ga0501035_0017103 3300049822 Bacteria 6681
153 Ga0501035_0024937 3300049822 Bacteria 5484
154 Ga0501035_0153210 3300049822 Unclassified 1999
155 Ga0501035_0185902 3300049822 Bacteria 1788
156 Ga0501044_0035968 3300049823 Bacteria 5183
157 Ga0501044_0037985 3300049823 Bacteria 5031
158 Ga0501044_0047304 3300049823 Unclassified 4449
159 Ga0501044_0458076 3300049823 Bacteria 1181
160 Ga0501045_0094138 3300049824 Bacteria 2216
161 Ga0501045_0430878 3300049824 Bacteria 981
162 Ga0501045_0568435 3300049824 Bacteria 840
163 nmdc:mga0yw44_97310_c1 3300050492 Bacteria 1869
164 Ga0500595_000582 3300053119 Bacteria 21779
165 Ga0500658_0001059 3300053134 Bacteria 11270
166 Ga0500658_0006033 3300053134 Bacteria 4504
167 Ga0500568_0010027 3300053139 Bacteria 4466
168 Ga0500604_0037094 3300053151 Bacteria 1456
169 Ga0500636_0007402 3300053177 Bacteria 6352
170 Ga0500636_0049098 3300053177 Unclassified 2483
171 Ga0501082_0201375 3300060353 Bacteria 1732
172 Ga0495586_0047135
173 rootL2_10027281
174 rootL2_10322805
175 Ga0070687_100127388
176 Ga0070667_100080341
177 Ga0070714_100088542
178 Ga0070679_100009645
179 Ga0070679_100616455
180 Ga0068853_100073672
181 Ga0068855_100317751
182 Ga0068856_100073978
183 Ga0068859_100598888
184 Ga0068864_100128790
185 Ga0081539_10016797
186 Ga0070717_10582089
187 Ga0075365_10118558
188 Ga0097620_100598925
189 Ga0105240_10068554
190 Ga0105240_10105635
191 Ga0105248_10484023
192 Ga0105238_10018649
193 Ga0105238_10089578
194 Ga0105238_10212584
195 Ga0157369_10036334
196 Ga0207647_10007408
197 Ga0207695_10050914
198 Ga0207695_10240659
199 Ga0207652_10044162
200 Ga0207652_10058961
201 Ga0207694_10041763
202 Ga0207694_10146892
203 Ga0207650_10123430
204 Ga0207664_10047730
205 Ga0207658_10157480
206 Ga0207702_10050210
207 Ga0265337_1007050
208 Ga0265326_10001335
209 Ga0265326_10045484
210 Ga0265319_1004274
211 Ga0265334_10015058
212 Ga0265318_10000004
213 Ga0265318_10002567
214 Ga0265318_10002814
215 Ga0265338_10000025
216 Ga0265338_10000223
217 Ga0265338_10002222
218 Ga0265338_10002248
219 Ga0265338_10006097
220 Ga0265338_10007983
221 Ga0265324_10006781
222 Ga0265324_10026534
223 Ga0265332_10014967
224 Ga0265332_10090725
225 Ga0265320_10004526
226 Ga0265320_10096637
227 Ga0265325_10037723
228 Ga0265340_10012689
229 Ga0265316_10110978
230 Ga0265316_10256425
231 Ga0265313_10002439
232 Ga0265313_10014788
233 Ga0265313_10029803
234 Ga0307508_10000027
235 Ga0265314_10002023
236 Ga0265314_10033088
237 Ga0265342_10057215
238 Ga0265342_10104164
239 Ga0373928_0000007
240 Ga0373929_0000120
241 Ga0373940_0014776
242 Ga0373944_0001426
243 Ga0373951_0001307
244 Ga0373932_0000003
245 Ga0373945_0000715
246 Ga0373954_0022147
247 Ga0373956_0096704
248 Ga0373943_0102183
249 Ga0373942_0006576
250 Ga0373962_0000051
251 Ga0373931_0000011
252 Ga0373935_0027667
253 Ga0373927_0008549
254 Ga0373927_0084268
255 Ga0373927_0158854
256 Ga0373927_0405484
257 Ga0373933_0352342
258 Ga0373947_0035569
259 Ga0373937_0170636
260 Ga0373937_0262483
261 Ga0373925_0001489
262 Ga0373925_0029860
263 Ga0395899_0173839
264 Ga0395900_0178157
265 Ga0395898_0162286
266 Ga0395901_0043026
267 Ga0439465_0001746
268 Ga0439431_0001885
269 Ga0439445_0013581
270 Ga0439462_0019167
271 Ga0439434_0021951
272 Ga0451577_0007055
273 Ga0451577_0108175
274 Ga0453684_0004781
275 Ga0453684_0212360
276 Ga0451576_0000163
277 Ga0451576_0054361
278 Ga0451576_0124070
279 Ga0451576_0204001
280 Ga0451576_0288047
281 Ga0495630_0007381
282 Ga0495630_0542462
283 Ga0495586_0286062
284 Ga0495667_0041900
285 Ga0495613_0209908
286 Ga0495674_0335912
287 Ga0495675_0099695
288 Ga0495675_0204328
289 Ga0495681_0041830
290 Ga0495684_0280748
291 Ga0495686_0014138
292 Ga0495686_0016994
293 Ga0496122_0061272
294 Ga0501031_0033030
295 Ga0501031_0157916
296 Ga0501032_0000907
297 Ga0501032_0088014
298 Ga0501033_0005314
299 Ga0501033_0010178
300 Ga0501034_0019392
301 Ga0501036_0559394
302 Ga0501038_0011907
303 Ga0501042_0084014
304 Ga0501043_0000484
305 Ga0501043_0009035
306 Ga0501043_0166820
307 Ga0501043_0344722
308 Ga0501046_0000066
309 Ga0501046_0001053
310 Ga0501046_0010161
311 Ga0501046_0089389
312 Ga0501046_0358973
313 Ga0501047_0012448
314 Ga0501047_0021603
315 Ga0501047_0070217
316 Ga0501047_0304480
317 Ga0501048_0026600
318 Ga0501048_0314283
319 Ga0501074_0038337
320 Ga0501080_0125833
321 Ga0501083_0000007
322 Ga0501083_0007108
323 Ga0501035_0017103
324 Ga0501035_0024937
325 Ga0501035_0153210
326 Ga0501035_0185902
327 Ga0501044_0035968
328 Ga0501044_0037985
329 Ga0501044_0047304
330 Ga0501044_0458076
331 Ga0501045_0094138
332 Ga0501045_0430878
333 Ga0501045_0568435
334 nmdc:mga0yw44_97310_c1
335 Ga0500595_000582
336 Ga0500658_0001059
337 Ga0500658_0006033
338 Ga0500568_0010027
339 Ga0500604_0037094
340 Ga0500636_0007402
341 Ga0500636_0049098
342 Ga0501082_0201375

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

43

229

0.96

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

50

277

0.93

PF08659

KR

KR domain

43

217

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3emk-assembly1.cif.gz_D 2.5a crystal structure of glucose/ribitol dehydrogenase from brucella melitensis 0.9697 10 253
3emk-assembly1.cif.gz_B 2.5a crystal structure of glucose/ribitol dehydrogenase from brucella melitensis 0.9673 10 253
6wpr-assembly1.cif.gz_B-2 crystal structure of a putative 3-oxoacyl-acp reductase (fabg) with nadp(h) from acinetobacter baumannii 0.9655 15 253
4g81-assembly1.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9654 9 255
3emk-assembly1.cif.gz_C 2.5a crystal structure of glucose/ribitol dehydrogenase from brucella melitensis 0.9653 9 253
ID Description Score Start End Superfamily
4cqmK00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9629 15 255 3.40.50.720
4iboB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9623 8 253 3.40.50.720
af_Q0JDU3_1_168_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9586 87 253 3.40.50.720
3grpC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9585 10 252 3.40.50.720
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9575 96 196 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A809HQ51-F1-model_v4 deleted 0.9917 8 257
AF-A0A699KIL4-F1-model_v4 mannonate dehydratase (EC 4.2.1.8) 0.9913 10 194 GO:0008198
GO:0008927
GO:0016491
GO:0030145
GO:0042840
AF-A0A659K875-F1-model_v4 deleted 0.9905 9 257
AF-A0A5F1HNS5-F1-model_v4 deleted 0.9905 9 257
AF-A0A5C1W9F4-F1-model_v4 SDR family oxidoreductase 0.9892 5 257 GO:0016616

Map