F259745

General Info

Members Datasets Scaffolds Average Seq Length
171 116 118 404

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2857720070|2857721235
Length 450
Sequence SIVEAMGASHDDEPIRRVLWRLAPMIYGPTTLFGLGEGAVIPLIPVIASQLGADVATSALVAAALVVGQLCGNLPAGWAVARIGERATMIIAGLLALVGVAAMAFAPVLGVFAASVFLIGICAAAFGVARHAFMTTRVPLAFRARALSLLGGSFRLGMFVGPFIAAALLWAFGDEHATIWFFGVCLVAMIALVAFGPEPEKRLGPPPAVARTAGGEALTTAPVRTRRVPGTGVVRTAWRNRDVLARLGVAAASLSALRSTRQVLLPLWGVAIGLDGSTIALVVGVSGAIDFALFYASGQVMDRFGRLWAALPAMLLMSAGLIALALTSASAQPELWFALFAAVLGVGNGLSSGILLTLGADVAPTSNPAPFLGSWRTLTDAGGAAAPLIVSAITAVASLPAAAAVMGAFGLVGALGFIRWVPRFVPRTRLDGGFDAGKDPGDLDDLDART

Samples

Sample ID Description Type Environment
1 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
2 2643221546 Microbacterium sp. Root53 Isolate Unclassified
3 2643221553 Microbacterium sp. Root553 Isolate Unclassified
4 2643221566 Microbacterium sp. Root166 Isolate Unclassified
5 2643221575 Microbacterium sp. Root61 Isolate Unclassified
6 2643221597 Microbacterium sp. Root180 Isolate Unclassified
7 2643221630 Microbacterium sp. Root322 Isolate Unclassified
8 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
9 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
10 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
11 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
12 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
13 2773857759 Microbacterium sp. 1294 Isolate Unclassified
14 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
15 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
16 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
17 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
18 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
19 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
20 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
21 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
22 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
23 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
24 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
25 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
26 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
27 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
28 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
29 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
30 2919069694 Microbacterium sp. 1154 Isolate Unclassified
31 2919395869 Microbacterium resistens 2980 Isolate Unclassified
32 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
33 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
34 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
35 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
36 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
37 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
38 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
39 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
40 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
41 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
42 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
43 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
44 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
45 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
46 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
47 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
48 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
49 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
50 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
51 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
52 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
53 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
54 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
59 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
60 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
72 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
73 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
77 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
78 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
79 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
80 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
81 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
82 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
83 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
84 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
85 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
86 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
87 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
88 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
89 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
90 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
91 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
92 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
93 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
94 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
95 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
104 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
105 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
106 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
107 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
108 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
109 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
110 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
111 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
112 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
113 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
114 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
115 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
116 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.84
Metatranscriptomes 1.17
Isolates 30.99

Biome Distribution

Category Percentage (%)
Aerial Root 1.17
Bulb 0
Endosphere 5.26
Nodule 0
Rhizoplane 5.85
Rhizosphere 46.2
Stem 0
Stem Tuber 0
Unclassified 41.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1002295 3300002738 Bacteria 5152
2 rootH2_10059347 3300003320 Bacteria 4273
3 Ga0006562J51391_1051410 3300003578 Bacteria 4200
4 Ga0006562J51391_1051411 3300003578 Bacteria 4220
5 Ga0070658_10035515 3300005327 Bacteria 4016
6 Ga0070658_10070260 3300005327 Bacteria 2866
7 Ga0070658_10152166 3300005327 Bacteria 1937
8 Ga0070667_100014761 3300005367 Bacteria 6454
9 Ga0070710_10022025 3300005437 Bacteria 3329
10 Ga0068855_100049062 3300005563 Bacteria 4980
11 Ga0068855_100081669 3300005563 Bacteria 3746
12 Ga0068852_100028343 3300005616 Bacteria 4581
13 Ga0068851_10000009 3300005834 Bacteria 217844
14 Ga0075365_10007651 3300006038 Bacteria 6073
15 Ga0105241_10000101 3300009174 Bacteria 62472
16 Ga0105237_10000604 3300009545 Bacteria 50042
17 Ga0157371_10118851 3300013102 Bacteria 1879
18 Ga0171462_1003 3300013250 Bacteria 853796
19 Ga0209646_1000013 3300025246 Bacteria 565830
20 Ga0209148_1001317 3300025254 Bacteria 13235
21 Ga0207656_10000001 3300025321 Bacteria 1323684
22 Ga0207656_10000003 3300025321 Bacteria 771644
23 Ga0207656_10000004 3300025321 Bacteria 632320
24 Ga0207655_1001200 3300025728 Bacteria 24990
25 Ga0207705_10078051 3300025909 Bacteria 2409
26 Ga0207705_10082066 3300025909 Bacteria 2351
27 Ga0207654_10000003 3300025911 Bacteria 1030378
28 Ga0207695_10018848 3300025913 Bacteria 7963
29 Ga0207671_10000001 3300025914 Bacteria 1318881
30 Ga0207694_10000329 3300025924 Bacteria 44700
31 Ga0207667_10015206 3300025949 Bacteria 8750
32 Ga0207667_10038204 3300025949 Bacteria 5128
33 Ga0207658_10012595 3300025986 Bacteria 5774
34 Ga0207698_10000581 3300026142 Bacteria 21388
35 Ga0207698_10008735 3300026142 Bacteria 6424
36 Ga0307515_10154931 3300028794 Bacteria 2371
37 Ga0307406_10000018 3300031901 Bacteria 101770
38 Ga0307406_10000491 3300031901 Bacteria 22718
39 Ga0307406_10003102 3300031901 Bacteria 9032
40 Ga0307406_10183407 3300031901 Bacteria 1526
41 Ga0307412_10039667 3300031911 Bacteria 3042
42 Ga0307415_100237599 3300032126 Bacteria 1472
43 Ga0395898_0160249 3300037466 Bacteria 2152
44 Ga0395901_0305099 3300038443 Bacteria 1650
45 Ga0451791_0103915 3300041451 Bacteria 1418
46 Ga0451793_0275005 3300041452 Bacteria 2687
47 Ga0466965_0000023 3300044683 Bacteria 61686
48 Ga0466970_0000017 3300044765 Bacteria 64907
49 Ga0466970_0021017 3300044765 Bacteria 3398
50 Ga0466970_0078537 3300044765 Bacteria 1781
51 Ga0496105_0021157 3300048908 Bacteria 5261
52 Ga0496105_0071816 3300048908 Bacteria 2860
53 Ga0496108_0048568 3300048911 Bacteria 3548
54 Ga0496109_0044043 3300048912 Bacteria 4047
55 Ga0496109_0137801 3300048912 Bacteria 2281
56 Ga0496111_0246461 3300048914 Bacteria 1326
57 Ga0496114_0042997 3300048917 Bacteria 3746
58 Ga0496115_0101003 3300048918 Bacteria 2365
59 Ga0496117_0000053 3300048920 Bacteria 279396
60 Ga0496117_0000827 3300048920 Bacteria 47916
61 Ga0496117_0004586 3300048920 Bacteria 15113
62 Ga0496117_0019765 3300048920 Bacteria 5520
63 Ga0496118_0055932 3300048921 Bacteria 2971
64 Ga0496119_0001516 3300048922 Bacteria 27747
65 Ga0496119_0001669 3300048922 Bacteria 25932
66 Ga0496119_0009954 3300048922 Bacteria 8064
67 Ga0496119_0069856 3300048922 Bacteria 2062
68 Ga0496120_0001073 3300048923 Bacteria 36038
69 Ga0496120_0003444 3300048923 Bacteria 14421
70 Ga0496120_0003578 3300048923 Bacteria 13992
71 Ga0496120_0010413 3300048923 Bacteria 6492
72 Ga0496120_0011784 3300048923 Bacteria 5984
73 Ga0496122_0000373 3300048925 Bacteria 96291
74 Ga0496122_0033262 3300048925 Bacteria 4245
75 Ga0496122_0134778 3300048925 Bacteria 1560
76 Ga0496123_0000213 3300048926 Bacteria 118378
77 Ga0496123_0014146 3300048926 Bacteria 6635
78 Ga0496124_0008169 3300048927 Bacteria 10981
79 Ga0496124_0017491 3300048927 Bacteria 6752
80 Ga0496124_0020803 3300048927 Bacteria 6056
81 Ga0496125_0000077 3300048928 Bacteria 232629
82 Ga0496125_0004181 3300048928 Bacteria 16827
83 Ga0496125_0011041 3300048928 Bacteria 9065
84 Ga0496125_0051094 3300048928 Bacteria 3413
85 Ga0496125_0064615 3300048928 Bacteria 2906
86 Ga0496126_0003030 3300048929 Bacteria 21773
87 Ga0496126_0005682 3300048929 Bacteria 14146
88 Ga0496126_0008096 3300048929 Bacteria 11384
89 Ga0496126_0021034 3300048929 Bacteria 6384
90 Ga0496126_0058306 3300048929 Bacteria 3481
91 Ga0496126_0223183 3300048929 Bacteria 1582
92 Ga0501032_0115707 3300049569 Bacteria 1773
93 Ga0501034_0000699 3300049571 Bacteria 50906
94 Ga0501034_0073479 3300049571 Bacteria 3428
95 Ga0501034_0139327 3300049571 Bacteria 2406
96 Ga0501034_0245820 3300049571 Bacteria 1734
97 Ga0501037_0056605 3300049573 Bacteria 2863
98 Ga0501037_0132916 3300049573 Bacteria 1783
99 Ga0501038_0021752 3300049574 Bacteria 5755
100 Ga0501038_0031190 3300049574 Bacteria 4712
101 Ga0501038_0076436 3300049574 Bacteria 2828
102 Ga0501038_0151440 3300049574 Bacteria 1891
103 Ga0501039_0096995 3300049575 Bacteria 2299
104 Ga0501039_0212881 3300049575 Bacteria 1520
105 Ga0501043_0091134 3300049579 Bacteria 2397
106 Ga0501070_0004202 3300049586 Bacteria 12380
107 Ga0501070_0010151 3300049586 Bacteria 7972
108 Ga0501070_0119312 3300049586 Bacteria 2180
109 Ga0501070_0160447 3300049586 Bacteria 1854
110 Ga0501080_0000812 3300049742 Bacteria 25441
111 Ga0501035_0073040 3300049822 Bacteria 3035
112 Ga0500643_001330 3300053087 Bacteria 14429
113 Ga0500651_0000323 3300053093 Bacteria 27347
114 Ga0500568_0000021 3300053139 Bacteria 185406
115 Ga0500568_0000528 3300053139 Bacteria 28286
116 Ga0500568_0000697 3300053139 Bacteria 24078
117 Ga0500616_0000426 3300053153 Bacteria 56192
118 Ga0500620_000845 3300053155 Bacteria 5317

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049586 Ga0501070_0160447 Ga0501070_0160447_838_1824 263
2 3300048914 Ga0496111_0246461 Ga0496111_0246461_261_1307 290
3 3300044765 Ga0466970_0021017 Ga0466970_0021017_230_1432 319
4 3300038443 Ga0395901_0305099 Ga0395901_0305099_324_1601 321
5 3300049571 Ga0501034_0000699 Ga0501034_0000699_44475_45710 323
6 3300049571 Ga0501034_0073479 Ga0501034_0073479_262_1515 323
7 3300049586 Ga0501070_0004202 Ga0501070_0004202_250_1503 323
8 3300049742 Ga0501080_0000812 Ga0501080_0000812_19432_20685 323
9 3300048925 Ga0496122_0033262 Ga0496122_0033262_137_1375 337
10 3300048925 Ga0496122_0134778 Ga0496122_0134778_312_1538 337
11 3300048928 Ga0496125_0011041 Ga0496125_0011041_2788_4026 337
12 3300048929 Ga0496126_0058306 Ga0496126_0058306_1294_2532 337
13 3300053093 Ga0500651_0000323 Ga0500651_0000323_17494_18717 337
14 3300048920 Ga0496117_0019765 Ga0496117_0019765_3205_4551 338
15 3300048921 Ga0496118_0055932 Ga0496118_0055932_798_2144 338
16 3300048922 Ga0496119_0009954 Ga0496119_0009954_1166_2500 338
17 3300048923 Ga0496120_0003444 Ga0496120_0003444_1009_2343 338
18 3300049822 Ga0501035_0073040 Ga0501035_0073040_1019_2308 338
19 3300041451 Ga0451791_0103915 Ga0451791_0103915_148_1356 339
20 3300009174 Ga0105241_10000101 Ga0105241_1000010148 340
21 3300025254 Ga0209148_1001317 Ga0209148_10013175 340
22 3300025911 Ga0207654_10000003 Ga0207654_10000003629 340
23 3300025913 Ga0207695_10018848 Ga0207695_100188482 340
24 3300048923 Ga0496120_0010413 Ga0496120_0010413_2175_3482 340
25 3300005563 Ga0068855_100049062 Ga0068855_1000490622 346
26 3300025949 Ga0207667_10038204 Ga0207667_100382044 346
27 3300053155 Ga0500620_000845 Ga0500620_000845_1581_2843 347
28 3300005327 Ga0070658_10152166 Ga0070658_101521661 350
29 3300005616 Ga0068852_100028343 Ga0068852_1000283434 350
30 3300005834 Ga0068851_10000009 Ga0068851_10000009215 350
31 3300009545 Ga0105237_10000604 Ga0105237_1000060448 350
32 3300025321 Ga0207656_10000001 Ga0207656_10000001315 350
33 3300025321 Ga0207656_10000003 Ga0207656_10000003421 350
34 3300025321 Ga0207656_10000004 Ga0207656_10000004278 350
35 3300025909 Ga0207705_10082066 Ga0207705_100820662 350
36 3300025914 Ga0207671_10000001 Ga0207671_10000001313 350
37 3300025924 Ga0207694_10000329 Ga0207694_100003292 350
38 3300026142 Ga0207698_10000581 Ga0207698_1000058124 350
39 3300026142 Ga0207698_10008735 Ga0207698_100087354 350
40 3300005367 Ga0070667_100014761 Ga0070667_1000147615 351
41 3300025986 Ga0207658_10012595 Ga0207658_100125954 351
42 3300049574 Ga0501038_0031190 Ga0501038_0031190_3017_4243 351
43 3300003320 rootH2_10059347 rootH2_100593477 352
44 iso_pu_bacteria 2643221542 2643735102 352
45 iso_pu_bacteria 2643221553 2643786751 352
46 iso_pu_bacteria 2643221630 2644173264 352
47 iso_pu_bacteria 2643221724 2644681422 352
48 iso_pu_bacteria 2728369380 2730230140 352
49 iso_pu_bacteria 2747842429 2747953620 352
50 3300048912 Ga0496109_0044043 Ga0496109_0044043_1041_2279 354
51 3300049575 Ga0501039_0212881 Ga0501039_0212881_130_1350 354
52 3300006038 Ga0075365_10007651 Ga0075365_100076516 355
53 3300031901 Ga0307406_10003102 Ga0307406_100031028 355
54 3300048917 Ga0496114_0042997 Ga0496114_0042997_953_2230 355
55 3300053139 Ga0500568_0000528 Ga0500568_0000528_16894_18132 355
56 3300031901 Ga0307406_10000491 Ga0307406_1000049114 356
57 3300031911 Ga0307412_10039667 Ga0307412_100396673 356
58 3300048920 Ga0496117_0000053 Ga0496117_0000053_24024_25292 356
59 3300048920 Ga0496117_0000827 Ga0496117_0000827_5901_7139 356
60 3300048922 Ga0496119_0001669 Ga0496119_0001669_3858_5144 356
61 3300048923 Ga0496120_0001073 Ga0496120_0001073_13348_14616 356
62 3300048923 Ga0496120_0003578 Ga0496120_0003578_4124_5410 356
63 3300048926 Ga0496123_0014146 Ga0496123_0014146_3982_5250 356
64 3300048927 Ga0496124_0017491 Ga0496124_0017491_2577_3845 356
65 3300048928 Ga0496125_0000077 Ga0496125_0000077_125535_126764 356
66 3300048928 Ga0496125_0004181 Ga0496125_0004181_5135_6403 356
67 3300048928 Ga0496125_0064615 Ga0496125_0064615_904_2142 356
68 3300048929 Ga0496126_0005682 Ga0496126_0005682_3821_5059 356
69 3300048929 Ga0496126_0008096 Ga0496126_0008096_4292_5560 356
70 3300049571 Ga0501034_0139327 Ga0501034_0139327_776_1999 356
71 3300053087 Ga0500643_001330 Ga0500643_001330_4268_5539 356
72 3300013250 Ga0171462_1003 Ga0171462_100381 357
73 3300005437 Ga0070710_10022025 Ga0070710_100220251 359
74 iso_pu_bacteria 2643221575 2643885820 359
75 iso_pu_bacteria 2808606368 2808885890 359
76 iso_pu_bacteria 8002811521 8002813937 359
77 3300013102 Ga0157371_10118851 Ga0157371_101188511 361
78 3300044683 Ga0466965_0000023 Ga0466965_0000023_59039_60289 361
79 3300049569 Ga0501032_0115707 Ga0501032_0115707_352_1593 361
80 3300049571 Ga0501034_0245820 Ga0501034_0245820_24_1265 361
81 3300049573 Ga0501037_0056605 Ga0501037_0056605_1440_2678 361
82 3300049573 Ga0501037_0132916 Ga0501037_0132916_266_1507 361
83 3300049574 Ga0501038_0021752 Ga0501038_0021752_1759_3006 361
84 3300049574 Ga0501038_0076436 Ga0501038_0076436_283_1524 361
85 3300049575 Ga0501039_0096995 Ga0501039_0096995_522_1763 361
86 3300049579 Ga0501043_0091134 Ga0501043_0091134_674_1915 361
87 3300049586 Ga0501070_0119312 Ga0501070_0119312_418_1656 361
88 3300028794 Ga0307515_10154931 Ga0307515_101549312 362
89 3300048929 Ga0496126_0003030 Ga0496126_0003030_2016_3269 362
90 iso_pu_bacteria 2857733635 2857736747 362
91 iso_pu_bacteria 2964326757 2964329048 362
92 iso_pu_bacteria 2995726249 2995726562 362
93 3300005327 Ga0070658_10070260 Ga0070658_100702602 363
94 3300025909 Ga0207705_10078051 Ga0207705_100780512 363
95 3300048922 Ga0496119_0069856 Ga0496119_0069856_237_1571 363
96 3300048923 Ga0496120_0011784 Ga0496120_0011784_2293_3627 363
97 3300053139 Ga0500568_0000697 Ga0500568_0000697_3621_4859 363
98 3300048920 Ga0496117_0004586 Ga0496117_0004586_4131_5465 364
99 iso_pu_bacteria 2870628048 2870628292 364
100 iso_pu_bacteria 2946041624 2946044786 364
101 iso_pu_bacteria 2946080515 2946084592 364
102 3300037466 Ga0395898_0160249 Ga0395898_0160249_564_1823 365
103 iso_pu_bacteria 2852663356 2852665582 365
104 iso_pu_bacteria 2857723135 2857725056 365
105 iso_pu_bacteria 2919395869 2919395905 365
106 iso_pu_bacteria 8004182704 8004185675 365
107 3300041452 Ga0451793_0275005 Ga0451793_0275005_1376_2638 366
108 3300044765 Ga0466970_0000017 Ga0466970_0000017_22046_23296 366
109 3300044765 Ga0466970_0078537 Ga0466970_0078537_361_1647 366
110 3300048929 Ga0496126_0223183 Ga0496126_0223183_294_1556 366
111 iso_pu_bacteria 2757320536 2758226424 366
112 iso_pu_bacteria 2821268502 2821270317 366
113 iso_pu_bacteria 2833709550 2833711276 366
114 iso_pu_bacteria 2946033335 2946036969 366
115 iso_pu_bacteria 8055037949 8055039565 366
116 3300005327 Ga0070658_10035515 Ga0070658_100355153 367
117 3300005563 Ga0068855_100081669 Ga0068855_1000816692 367
118 3300025949 Ga0207667_10015206 Ga0207667_100152062 367
119 3300048908 Ga0496105_0021157 Ga0496105_0021157_2014_3294 367
120 3300048911 Ga0496108_0048568 Ga0496108_0048568_2186_3466 367
121 3300048918 Ga0496115_0101003 Ga0496115_0101003_479_1756 367
122 3300048927 Ga0496124_0020803 Ga0496124_0020803_623_1960 367
123 3300053139 Ga0500568_0000021 Ga0500568_0000021_25322_26599 367
124 iso_pu_bacteria 2904509784 2904511714 367
125 iso_pu_bacteria 2908678064 2908680638 367
126 iso_pu_bacteria 2919069694 2919071807 367
127 iso_pu_bacteria 2974294766 2974297452 367
128 iso_pu_bacteria 2977228692 2977231691 367
129 iso_pu_bacteria 8055034563 8055034883 367
130 iso_pu_bacteria 2643221566 2643848708 368
131 iso_pu_bacteria 2643221575 2643885819 368
132 iso_pu_bacteria 2857720070 2857721235 368
133 iso_pu_bacteria 2928090899 2928092115 368
134 iso_pu_bacteria 2984580707 2984581121 368
135 iso_pu_bacteria 8004212874 8004213825 368
136 3300025246 Ga0209646_1000013 Ga0209646_1000013545 369
137 3300032126 Ga0307415_100237599 Ga0307415_1002375992 369
138 3300048908 Ga0496105_0071816 Ga0496105_0071816_45_1385 369
139 3300048912 Ga0496109_0137801 Ga0496109_0137801_400_1740 369
140 3300031901 Ga0307406_10183407 Ga0307406_101834071 370
141 3300049574 Ga0501038_0151440 Ga0501038_0151440_270_1622 370
142 3300049586 Ga0501070_0010151 Ga0501070_0010151_43_1326 370
143 iso_pu_bacteria 2773857758 2774380098 370
144 iso_pu_bacteria 2811994872 2812323606 370
145 iso_pu_bacteria 2974324384 2974326310 370
146 iso_pu_bacteria 2977236895 2977237053 370
147 iso_pu_bacteria 2977264416 2977266992 370
148 iso_pu_bacteria 2984542743 2984545155 370
149 3300025728 Ga0207655_1001200 Ga0207655_100120027 371
150 3300048925 Ga0496122_0000373 Ga0496122_0000373_56401_57735 371
151 3300048926 Ga0496123_0000213 Ga0496123_0000213_60360_61694 371
152 3300048927 Ga0496124_0008169 Ga0496124_0008169_3812_5146 371
153 3300048928 Ga0496125_0051094 Ga0496125_0051094_1643_2977 371
154 3300048929 Ga0496126_0021034 Ga0496126_0021034_3269_4603 371
155 iso_pu_bacteria 2773857759 2774384203 371
156 iso_pu_bacteria 2773857763 2774399118 371
157 iso_pu_bacteria 2808606306 2808630891 371
158 iso_pu_bacteria 8016254467 8016257261 371
159 iso_pu_bacteria 8045830549 8045831902 371
160 3300002738 JGI25154J39366_1002295 JGI25154J39366_10022951 372
161 3300003578 Ga0006562J51391_1051410 Ga0006562J51391_10514106 372
162 3300003578 Ga0006562J51391_1051411 Ga0006562J51391_10514112 372
163 3300031901 Ga0307406_10000018 Ga0307406_1000001814 372
164 3300048922 Ga0496119_0001516 Ga0496119_0001516_20708_22036 372
165 3300053153 Ga0500616_0000426 Ga0500616_0000426_15269_16612 372
166 iso_pu_bacteria 2643221546 2643753642 372
167 iso_pu_bacteria 2643221597 2643997697 372
168 iso_pu_bacteria 2808606447 2809227685 372
169 iso_pu_bacteria 2852632344 2852634441 372
170 iso_pu_bacteria 2870628048 2870630640 372
171 iso_pu_bacteria 2906799679 2906803109 372

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

30

387

0.89

PF00083

Sugar_tr

Sugar (and other) transporter

32

199

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kkj-assembly1.cif.gz_B crystal structure of drug:proton antiporter-1 (dha1) family sotb, in the inward open conformation 0.7531 17 369
8t6b-assembly1.cif.gz_A human vmat2 in complex with serotonin 0.7337 17 368
6e9n-assembly2.cif.gz_B e. coli d-galactonate:proton symporter in the inward open form 0.7175 12 365
4iu9-assembly1.cif.gz_B crystal structure of a membrane transporter 0.7157 6 368
4lds-assembly1.cif.gz_A the inward-facing structure of the glucose transporter from staphylococcus epidermidis 0.7098 14 365
ID Description Score Start End Superfamily
af_Q4E404_297_478_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9274 207 368 1.20.1250.20
af_Q4D047_237_423_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.857 229 369 1.20.1250.20
af_P76350_250_438_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8408 220 367 1.20.1250.20
af_A0A1D6L8U4_23_213_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8393 213 365 1.20.1250.20
af_Q2G199_259_457_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8321 213 372 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A399ZCT5-F1-model_v4 MFS transporter 0.8085 222 364 GO:0016020
GO:0022857
AF-A0A422NDI8-F1-model_v4 Integral membrane transport protein 0.8075 8 368 GO:0016020
GO:0022857
AF-A0A2E5F350-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.7969 11 365 GO:0016020
GO:0022857
AF-A0A2V6J6L0-F1-model_v4 MFS transporter 0.787 207 367 GO:0016020
GO:0022857
AF-A0A7V3REI8-F1-model_v4 MFS transporter 0.7869 211 367 GO:0016020
GO:0022857

Feature Viewer

pLDDT pTM Quality
76.6 0.75 High
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Predicted Structure (AlphaFold2)

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