F260604

General Info

Members Datasets Scaffolds Average Seq Length
172 141 344 211

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10013659|Ga0105240_1001365911
Length 216
Sequence MGNLPPSGREEPALSEPGQGLNFGEETPARQAATVILLRGGSSTLEVLLVKRTEKARFMGGAWVFPGGAVDDQDGDDPHRTAAARELLEEASITIARPNELVEFSRWITPAQVSVRFDTRFFLAQLPEGQEPRVDGEECVDQGWFTPQGALDAHTREEIALVFPTIKHLEQLGAFATVDELLEYASGRKVLPVQPKVWFDGEVARVLLPGEPGYDD

Samples

Sample ID Description Type Environment
1 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
25 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
39 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
50 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
91 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
92 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
93 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
94 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
95 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
98 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
99 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
102 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
103 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
104 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
105 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
106 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
107 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
108 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
109 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
110 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
111 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
112 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
113 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
114 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
115 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
116 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
117 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
118 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
119 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
120 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
121 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
122 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
123 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
132 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
139 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
140 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
141 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.42
Metatranscriptomes 0.58
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 9.88
Rhizosphere 88.95
Stem 0
Stem Tuber 0
Unclassified 1.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105240_10013659 3300009093 Bacteria 11137
2 Ga0070683_100730569 3300005329 Bacteria 948
3 Ga0070683_101376173 3300005329 Bacteria 678
4 Ga0070690_100087465 3300005330 Bacteria 2046
5 Ga0070670_100109685 3300005331 Bacteria 2378
6 Ga0070682_100044060 3300005337 Bacteria 2761
7 Ga0068868_100506208 3300005338 Bacteria 1058
8 Ga0070660_100331333 3300005339 Bacteria 1252
9 Ga0070689_100008721 3300005340 Bacteria 7156
10 Ga0070687_100012905 3300005343 Bacteria 3706
11 Ga0070692_10012204 3300005345 Bacteria 3968
12 Ga0070668_100179266 3300005347 Bacteria 1730
13 Ga0070675_100284521 3300005354 Bacteria 1454
14 Ga0070659_100052504 3300005366 Bacteria 3206
15 Ga0070714_100372890 3300005435 Bacteria 1344
16 Ga0070713_100025386 3300005436 Bacteria 4632
17 Ga0070701_10069694 3300005438 Bacteria 1876
18 Ga0070711_100005354 3300005439 Bacteria 7670
19 Ga0070711_100125354 3300005439 Bacteria 1905
20 Ga0070685_10083523 3300005466 Bacteria 1919
21 Ga0070684_100063760 3300005535 Bacteria 3231
22 Ga0070686_100160367 3300005544 Bacteria 1583
23 Ga0070693_100562701 3300005547 Bacteria 818
24 Ga0070665_100114713 3300005548 Bacteria 2696
25 Ga0070704_100456999 3300005549 Bacteria 1101
26 Ga0068854_100066192 3300005578 Bacteria 2629
27 Ga0070702_100067075 3300005615 Bacteria 2106
28 Ga0068852_100230433 3300005616 Bacteria 1765
29 Ga0068859_100143973 3300005617 Bacteria 2457
30 Ga0068864_100292800 3300005618 Bacteria 1522
31 Ga0068864_100383468 3300005618 Bacteria 1332
32 Ga0068862_100222701 3300005844 Bacteria 1708
33 Ga0075432_10018707 3300006058 Bacteria 2364
34 Ga0070716_100083720 3300006173 Bacteria 1911
35 Ga0070712_100036016 3300006175 Bacteria 3364
36 Ga0070712_100539118 3300006175 Bacteria 982
37 Ga0075434_100336659 3300006871 Bacteria 1530
38 Ga0097620_100143979 3300006931 Bacteria 2457
39 Ga0105240_10554494 3300009093 Bacteria 1271
40 Ga0105245_10064570 3300009098 Bacteria 3308
41 Ga0114129_10524393 3300009147 Bacteria 1544
42 Ga0105243_10019959 3300009148 Bacteria 5082
43 Ga0105237_10007463 3300009545 Bacteria 11962
44 Ga0105237_10295999 3300009545 Bacteria 1621
45 Ga0105238_10656941 3300009551 Bacteria 1059
46 Ga0105249_10215135 3300009553 Bacteria 1888
47 Ga0105249_11686931 3300009553 Bacteria 706
48 Ga0105239_10130206 3300010375 Bacteria 2798
49 Ga0105246_10131666 3300011119 Bacteria 1869
50 Ga0157378_10164571 3300013297 Bacteria 2077
51 Ga0163162_11390331 3300013306 Bacteria 798
52 Ga0157372_10225997 3300013307 Bacteria 2170
53 Ga0157372_10578184 3300013307 Bacteria 1309
54 Ga0157377_10089861 3300014745 Bacteria 1811
55 Ga0157377_10127907 3300014745 Bacteria 1548
56 Ga0157377_10216885 3300014745 Bacteria 1223
57 Ga0157379_10002514 3300014968 Bacteria 15350
58 Ga0206354_10452358 3300020081 Bacteria 1249
59 Ga0213874_10020192 3300021377 Bacteria 1823
60 Ga0207692_10129028 3300025898 Bacteria 1425
61 Ga0207688_10106711 3300025901 Bacteria 1622
62 Ga0207680_10121198 3300025903 Bacteria 1711
63 Ga0207699_10125427 3300025906 Bacteria 1666
64 Ga0207645_10073364 3300025907 Bacteria 2191
65 Ga0207643_10015692 3300025908 Bacteria 4125
66 Ga0207695_10035654 3300025913 Bacteria 5390
67 Ga0207671_10007463 3300025914 Bacteria 9484
68 Ga0207671_10161908 3300025914 Bacteria 1733
69 Ga0207693_10089304 3300025915 Bacteria 2415
70 Ga0207663_10003516 3300025916 Bacteria 7685
71 Ga0207663_10184779 3300025916 Bacteria 1492
72 Ga0207662_10005552 3300025918 Bacteria 6739
73 Ga0207657_10038430 3300025919 Bacteria 4261
74 Ga0207657_10112762 3300025919 Bacteria 2243
75 Ga0207649_10085994 3300025920 Bacteria 2048
76 Ga0207646_10309854 3300025922 Bacteria 1426
77 Ga0207694_10541833 3300025924 Bacteria 976
78 Ga0207650_10875110 3300025925 Bacteria 762
79 Ga0207687_10112392 3300025927 Bacteria 2024
80 Ga0207700_10003198 3300025928 Bacteria 9454
81 Ga0207664_10610910 3300025929 Bacteria 979
82 Ga0207664_10649979 3300025929 Bacteria 948
83 Ga0207690_10089109 3300025932 Bacteria 2175
84 Ga0207709_10215634 3300025935 Bacteria 1381
85 Ga0207709_10613705 3300025935 Bacteria 862
86 Ga0207669_10324903 3300025937 Bacteria 1179
87 Ga0207665_10119603 3300025939 Bacteria 1859
88 Ga0207691_10281971 3300025940 Bacteria 1429
89 Ga0207661_10095029 3300025944 Bacteria 2491
90 Ga0207661_10308123 3300025944 Bacteria 1421
91 Ga0207679_10071657 3300025945 Bacteria 2615
92 Ga0207667_10311798 3300025949 Bacteria 1607
93 Ga0207712_10204223 3300025961 Bacteria 1569
94 Ga0207640_10050197 3300025981 Bacteria 2705
95 Ga0207677_10176553 3300026023 Bacteria 1676
96 Ga0207678_10556825 3300026067 Bacteria 1003
97 Ga0207708_10007954 3300026075 Bacteria 7858
98 Ga0207702_10964465 3300026078 Bacteria 846
99 Ga0207676_10345138 3300026095 Bacteria 1375
100 Ga0207675_100039120 3300026118 Bacteria 4426
101 Ga0207683_10048124 3300026121 Bacteria 3734
102 Ga0207698_10519169 3300026142 Bacteria 1162
103 Ga0207428_10085284 3300027907 Bacteria 2460
104 Ga0268266_11027349 3300028379 Bacteria 798
105 Ga0268264_10132038 3300028381 Bacteria 2215
106 Ga0265337_1001301 3300028556 Bacteria 12475
107 Ga0265326_10000131 3300028558 Bacteria 38598
108 Ga0265319_1000146 3300028563 Bacteria 52336
109 Ga0265334_10057474 3300028573 Bacteria 1474
110 Ga0265318_10000355 3300028577 Bacteria 36365
111 Ga0265336_10000001 3300028666 Bacteria 916179
112 Ga0265338_10000532 3300028800 Bacteria 66760
113 Ga0265338_10022578 3300028800 Bacteria 6508
114 Ga0265324_10001480 3300029957 Bacteria 13331
115 Ga0265332_10098119 3300031238 Bacteria 1237
116 Ga0265340_10000002 3300031247 Bacteria 711693
117 Ga0265327_10003624 3300031251 Bacteria 14532
118 Ga0265327_10011609 3300031251 Bacteria 6043
119 Ga0307409_100338492 3300031995 Bacteria 1415
120 Ga0307416_100112085 3300032002 Bacteria 2407
121 Ga0373946_0072201 3300035171 Bacteria 1494
122 Ga0373931_0215530 3300035691 Bacteria 1154
123 Ga0373925_0249810 3300037068 Bacteria 1422
124 Ga0395901_0144595 3300038443 Bacteria 2500
125 Ga0395901_0171911 3300038443 Bacteria 2273
126 Ga0395901_1463964 3300038443 Bacteria 640
127 Ga0436363_1211374 3300039450 Bacteria 1296
128 Ga0466966_0234764 3300044684 Bacteria 1106
129 Ga0466961_0129772 3300044693 Unclassified 1580
130 Ga0466961_0303889 3300044693 Bacteria 974
131 Ga0466968_0356823 3300044735 Unclassified 711
132 Ga0466957_0024901 3300044842 Bacteria 3545
133 Ga0466960_0000159 3300044901 Bacteria 22900
134 Ga0466960_0367677 3300044901 Bacteria 823
135 Ga0466958_0440603 3300045836 Bacteria 843
136 Ga0466967_0117917 3300045976 Bacteria 2448
137 Ga0466967_0345430 3300045976 Bacteria 1440
138 Ga0495653_0001046 3300046463 Bacteria 21304
139 Ga0495653_0265484 3300046463 Bacteria 1133
140 Ga0495664_0000007 3300046477 Bacteria 386710
141 Ga0495652_0025661 3300046529 Bacteria 5210
142 Ga0495645_0000641 3300046543 Bacteria 24121
143 Ga0495581_0280132 3300047315 Bacteria 975
144 Ga0495676_0186369 3300047321 Bacteria 1450
145 Ga0495684_0005669 3300047471 Bacteria 9722
146 Ga0495614_0209701 3300048089 Bacteria 883
147 Ga0496100_0128578 3300048903 Bacteria 1781
148 Ga0496102_0000002 3300048905 Bacteria 814588
149 Ga0496102_0273217 3300048905 Bacteria 1593
150 Ga0496103_0000017 3300048906 Bacteria 244768
151 Ga0496105_0006870 3300048908 Bacteria 8759
152 Ga0496105_0321453 3300048908 Bacteria 1240
153 Ga0496105_0357394 3300048908 Bacteria 1166
154 Ga0496106_0169187 3300048909 Bacteria 1731
155 Ga0496107_0463758 3300048910 Bacteria 940
156 Ga0496108_0078656 3300048911 Bacteria 2791
157 Ga0496109_0055182 3300048912 Bacteria 3624
158 Ga0496109_0571713 3300048912 Bacteria 1065
159 Ga0496112_0198936 3300048915 Bacteria 1964
160 Ga0496112_0242565 3300048915 Bacteria 1754
161 Ga0496112_0797175 3300048915 Bacteria 869
162 Ga0496113_0288159 3300048916 Bacteria 1313
163 Ga0496115_0172542 3300048918 Bacteria 1788
164 Ga0501074_0094412 3300049590 Bacteria 2142
165 Ga0501080_0025925 3300049742 Bacteria 5446
166 nmdc:mga05p37_931684_c1 3300050507 Bacteria 932
167 nmdc:mga08y16_533893_c1 3300050511 Bacteria 1189
168 nmdc:mga0n895_134706_c1 3300050512 Bacteria 2496
169 nmdc:mga0rr50_738281_c1 3300050513 Bacteria 840
170 Ga0495601_0006148 3300053077 Bacteria 7005
171 Ga0495601_0035481 3300053077 Bacteria 3113
172 Ga0495619_0087617 3300053085 Bacteria 2105
173 Ga0105240_10013659
174 Ga0070683_100730569
175 Ga0070683_101376173
176 Ga0070690_100087465
177 Ga0070670_100109685
178 Ga0070682_100044060
179 Ga0068868_100506208
180 Ga0070660_100331333
181 Ga0070689_100008721
182 Ga0070687_100012905
183 Ga0070692_10012204
184 Ga0070668_100179266
185 Ga0070675_100284521
186 Ga0070659_100052504
187 Ga0070714_100372890
188 Ga0070713_100025386
189 Ga0070701_10069694
190 Ga0070711_100005354
191 Ga0070711_100125354
192 Ga0070685_10083523
193 Ga0070684_100063760
194 Ga0070686_100160367
195 Ga0070693_100562701
196 Ga0070665_100114713
197 Ga0070704_100456999
198 Ga0068854_100066192
199 Ga0070702_100067075
200 Ga0068852_100230433
201 Ga0068859_100143973
202 Ga0068864_100292800
203 Ga0068864_100383468
204 Ga0068862_100222701
205 Ga0075432_10018707
206 Ga0070716_100083720
207 Ga0070712_100036016
208 Ga0070712_100539118
209 Ga0075434_100336659
210 Ga0097620_100143979
211 Ga0105240_10554494
212 Ga0105245_10064570
213 Ga0114129_10524393
214 Ga0105243_10019959
215 Ga0105237_10007463
216 Ga0105237_10295999
217 Ga0105238_10656941
218 Ga0105249_10215135
219 Ga0105249_11686931
220 Ga0105239_10130206
221 Ga0105246_10131666
222 Ga0157378_10164571
223 Ga0163162_11390331
224 Ga0157372_10225997
225 Ga0157372_10578184
226 Ga0157377_10089861
227 Ga0157377_10127907
228 Ga0157377_10216885
229 Ga0157379_10002514
230 Ga0206354_10452358
231 Ga0213874_10020192
232 Ga0207692_10129028
233 Ga0207688_10106711
234 Ga0207680_10121198
235 Ga0207699_10125427
236 Ga0207645_10073364
237 Ga0207643_10015692
238 Ga0207695_10035654
239 Ga0207671_10007463
240 Ga0207671_10161908
241 Ga0207693_10089304
242 Ga0207663_10003516
243 Ga0207663_10184779
244 Ga0207662_10005552
245 Ga0207657_10038430
246 Ga0207657_10112762
247 Ga0207649_10085994
248 Ga0207646_10309854
249 Ga0207694_10541833
250 Ga0207650_10875110
251 Ga0207687_10112392
252 Ga0207700_10003198
253 Ga0207664_10610910
254 Ga0207664_10649979
255 Ga0207690_10089109
256 Ga0207709_10215634
257 Ga0207709_10613705
258 Ga0207669_10324903
259 Ga0207665_10119603
260 Ga0207691_10281971
261 Ga0207661_10095029
262 Ga0207661_10308123
263 Ga0207679_10071657
264 Ga0207667_10311798
265 Ga0207712_10204223
266 Ga0207640_10050197
267 Ga0207677_10176553
268 Ga0207678_10556825
269 Ga0207708_10007954
270 Ga0207702_10964465
271 Ga0207676_10345138
272 Ga0207675_100039120
273 Ga0207683_10048124
274 Ga0207698_10519169
275 Ga0207428_10085284
276 Ga0268266_11027349
277 Ga0268264_10132038
278 Ga0265337_1001301
279 Ga0265326_10000131
280 Ga0265319_1000146
281 Ga0265334_10057474
282 Ga0265318_10000355
283 Ga0265336_10000001
284 Ga0265338_10000532
285 Ga0265338_10022578
286 Ga0265324_10001480
287 Ga0265332_10098119
288 Ga0265340_10000002
289 Ga0265327_10003624
290 Ga0265327_10011609
291 Ga0307409_100338492
292 Ga0307416_100112085
293 Ga0373946_0072201
294 Ga0373931_0215530
295 Ga0373925_0249810
296 Ga0395901_0144595
297 Ga0395901_0171911
298 Ga0395901_1463964
299 Ga0436363_1211374
300 Ga0466966_0234764
301 Ga0466961_0129772
302 Ga0466961_0303889
303 Ga0466968_0356823
304 Ga0466957_0024901
305 Ga0466960_0000159
306 Ga0466960_0367677
307 Ga0466958_0440603
308 Ga0466967_0117917
309 Ga0466967_0345430
310 Ga0495653_0001046
311 Ga0495653_0265484
312 Ga0495664_0000007
313 Ga0495652_0025661
314 Ga0495645_0000641
315 Ga0495581_0280132
316 Ga0495676_0186369
317 Ga0495684_0005669
318 Ga0495614_0209701
319 Ga0496100_0128578
320 Ga0496102_0000002
321 Ga0496102_0273217
322 Ga0496103_0000017
323 Ga0496105_0006870
324 Ga0496105_0321453
325 Ga0496105_0357394
326 Ga0496106_0169187
327 Ga0496107_0463758
328 Ga0496108_0078656
329 Ga0496109_0055182
330 Ga0496109_0571713
331 Ga0496112_0198936
332 Ga0496112_0242565
333 Ga0496112_0797175
334 Ga0496113_0288159
335 Ga0496115_0172542
336 Ga0501074_0094412
337 Ga0501080_0025925
338 nmdc:mga05p37_931684_c1
339 nmdc:mga08y16_533893_c1
340 nmdc:mga0n895_134706_c1
341 nmdc:mga0rr50_738281_c1
342 Ga0495601_0006148
343 Ga0495601_0035481
344 Ga0495619_0087617

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00293

NUDIX

NUDIX domain

28

166

0.65

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qsj-assembly1.cif.gz_A crystal structure of nudix hydrolase from alicyclobacillus acidocaldarius 0.8874 19 177
4dyw-assembly1.cif.gz_A crystal structure of mutt nudix hydrolase from burkholderia pseudomallei 0.8579 19 166
4dyw-assembly1.cif.gz_A crystal structure of mutt nudix hydrolase from burkholderia pseudomallei 0.8459 19 166
3r03-assembly1.cif.gz_B the crystal structure of nudix hydrolase from rhodospirillum rubrum 0.8281 19 168
1v8y-assembly1.cif.gz_A-2 crystal structure analysis of the adp-ribose pyrophosphatase of e86q mutant, complexed with adp-ribose and zn 0.8174 22 169
ID Description Score Start End Superfamily
af_Q9VIV6_5_270_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8983 20 186 3.90.79.10
af_B3DHE6_3_303_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8908 21 179 3.90.79.10
af_Q6AYD9_3_267_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8861 20 179 3.90.79.10
af_Q54GC2_4_251_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8815 20 185 3.90.79.10
af_P91148_5_207_3.90.79.10 Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase 0.8705 17 184 3.90.79.10
ID Description Score Start End GO Terms
AF-A0A538L4B8-F1-model_v4 NUDIX hydrolase 0.9566 28 209 GO:0016818
GO:0046872
AF-A0A6J5ZZK2-F1-model_v4 Unannotated protein 0.9539 6 209 GO:0016818
GO:0046872
AF-A0A538L4B8-F1-model_v4 NUDIX hydrolase 0.9464 28 209 GO:0016818
GO:0046872
AF-A0A7W0LI82-F1-model_v4 NUDIX hydrolase 0.9429 17 187 GO:0016818
GO:0046872
AF-A0A6J7K2C5-F1-model_v4 Unannotated protein 0.9425 30 202 GO:0016818
GO:0046872

Map