F260701

General Info

Members Datasets Scaffolds Average Seq Length
172 104 172 414

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10003159|Ga0105239_100031591
Length 480
Sequence MQWGQSSSLERSDRLFRPMGGILRPHPEFPVLKRDSSEVEPIMKDLNDLPHDSEAHRSESESVSKFSRRAALLGAAAVAAATLPQVAQAKSADYFPLPDSAGGWRTLKDAASIRKLAAMDLARLDQAYEYTQRCSQNGGLLVVRHGYLVYEKYWGRAGRTANPDMASTGKAYTSIACGIMLKEFHDKIPDGLDTKVFTEKYLPEAFPLDDPRKADITLGQLLCMSAGYHGEGGSPGVVMGKVVPLSPVPGQDIRNLDQSSLKTPLWTDPGGGYSYSSPAPHIASIVLRHVTGMELKDYIDTRMAKPQGWGPWNYCLQRGDYLMPHANGAGSTAVHATDALRFGYCLLHKGQWGDKQVVPADYVAKCNKMLPYNPHTPFSLMFENNSDGHVFGAPRDAYYKSGAGGFGIFVVPSLDMVIYKMGGNNGQYDPTMAGIPLTYTPDTSRDNWKPIQGTPFIDGSHGGDDGLRRCLEMVSAATRD

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
39 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
40 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
65 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
70 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
71 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
72 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
73 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
74 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
77 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
78 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
79 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
80 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
81 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
82 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
83 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
84 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
85 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
86 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
87 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
88 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
89 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
90 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
91 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
92 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
93 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
94 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
95 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
98 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
99 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
100 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
101 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
102 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
103 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
104 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.58
Nodule 0
Rhizoplane 0
Rhizosphere 97.09
Stem 0
Stem Tuber 0
Unclassified 2.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10105998 3300005295 Bacteria 2619
2 Ga0070658_10000390 3300005327 Bacteria 38130
3 Ga0070658_10011981 3300005327 Bacteria 6961
4 Ga0070658_10237414 3300005327 Unclassified 1545
5 Ga0070683_100014023 3300005329 Bacteria 6999
6 Ga0070683_100186039 3300005329 Bacteria 1972
7 Ga0070680_100063338 3300005336 Bacteria 3029
8 Ga0070660_100018968 3300005339 Bacteria 5036
9 Ga0070689_100003102 3300005340 Bacteria 10968
10 Ga0070689_100003187 3300005340 Bacteria 10856
11 Ga0070689_100021943 3300005340 Bacteria 4761
12 Ga0070689_100057790 3300005340 Unclassified 3012
13 Ga0070675_100104213 3300005354 Bacteria 2392
14 Ga0070673_100282454 3300005364 Unclassified 1456
15 Ga0070688_100014458 3300005365 Bacteria 4473
16 Ga0070714_100093202 3300005435 Bacteria 2641
17 Ga0070701_10034854 3300005438 Bacteria 2524
18 Ga0070685_10062781 3300005466 Bacteria 2179
19 Ga0070707_100002865 3300005468 Bacteria 16416
20 Ga0068853_100000009 3300005539 Bacteria 257819
21 Ga0070672_100150719 3300005543 Bacteria 1923
22 Ga0070686_100014674 3300005544 Bacteria 4520
23 Ga0070686_100209792 3300005544 Bacteria 1401
24 Ga0070695_100130600 3300005545 Bacteria 1731
25 Ga0068855_100001704 3300005563 Bacteria 27502
26 Ga0068855_100106586 3300005563 Unclassified 3221
27 Ga0068855_100285934 3300005563 Unclassified 1829
28 Ga0068857_100209053 3300005577 Bacteria 1780
29 Ga0068852_100069341 3300005616 Bacteria 3090
30 Ga0068852_100204008 3300005616 Bacteria 1872
31 Ga0068863_100185853 3300005841 Bacteria 1996
32 Ga0068863_100226251 3300005841 Bacteria 1803
33 Ga0081455_10052179 3300005937 Bacteria 3503
34 Ga0070717_10008887 3300006028 Bacteria 7524
35 Ga0070717_10109768 3300006028 Bacteria 2352
36 Ga0097621_100033588 3300006237 Bacteria 4087
37 Ga0075431_100032366 3300006847 Bacteria 5388
38 Ga0075431_100035070 3300006847 Bacteria 5168
39 Ga0075431_100211365 3300006847 Unclassified 1981
40 Ga0075429_100186995 3300006880 Bacteria 1815
41 Ga0105240_10000149 3300009093 Bacteria 141753
42 Ga0105240_10001210 3300009093 Bacteria 44973
43 Ga0105240_10003661 3300009093 Bacteria 23774
44 Ga0105240_10068777 3300009093 Bacteria 4385
45 Ga0105240_10069605 3300009093 Unclassified 4354
46 Ga0105240_10095071 3300009093 Bacteria 3634
47 Ga0111539_10001479 3300009094 Bacteria 31393
48 Ga0105245_10087387 3300009098 Unclassified 2861
49 Ga0114129_10037252 3300009147 Bacteria 6868
50 Ga0114129_10175293 3300009147 Bacteria 2921
51 Ga0114129_10259302 3300009147 Unclassified 2331
52 Ga0114129_10325735 3300009147 Unclassified 2041
53 Ga0105241_10113071 3300009174 Bacteria 2176
54 Ga0105248_10215271 3300009177 Bacteria 2164
55 Ga0105237_10001738 3300009545 Bacteria 28132
56 Ga0105237_10007007 3300009545 Bacteria 12415
57 Ga0105237_10075000 3300009545 Bacteria 3374
58 Ga0105237_10086178 3300009545 Bacteria 3131
59 Ga0105237_10127317 3300009545 Bacteria 2541
60 Ga0105239_10003159 3300010375 Bacteria 20420
61 Ga0157369_10014074 3300013105 Bacteria 9039
62 Ga0157369_10050974 3300013105 Unclassified 4481
63 Ga0157369_10169249 3300013105 Bacteria 2303
64 Ga0157378_10037563 3300013297 Bacteria 4290
65 Ga0157372_10046447 3300013307 Bacteria 4821
66 Ga0157375_10000058 3300013308 Bacteria 121019
67 Ga0163163_10315250 3300014325 Unclassified 1617
68 Ga0157376_10034591 3300014969 Bacteria 4081
69 Ga0157376_10061578 3300014969 Bacteria 3155
70 Ga0157376_10153641 3300014969 Unclassified 2078
71 Ga0213876_10009151 3300021384 Bacteria 5334
72 Ga0209050_1000324 3300025298 Bacteria 95696
73 Ga0207705_10001514 3300025909 Bacteria 18461
74 Ga0207705_10134525 3300025909 Bacteria 1842
75 Ga0207695_10000701 3300025913 Bacteria 65744
76 Ga0207695_10000773 3300025913 Bacteria 60584
77 Ga0207695_10005708 3300025913 Bacteria 16408
78 Ga0207695_10034563 3300025913 Bacteria 5495
79 Ga0207695_10066280 3300025913 Bacteria 3709
80 Ga0207695_10234485 3300025913 Unclassified 1738
81 Ga0207671_10016713 3300025914 Bacteria 5694
82 Ga0207671_10046484 3300025914 Bacteria 3211
83 Ga0207671_10089352 3300025914 Bacteria 2318
84 Ga0207646_10003962 3300025922 Bacteria 16425
85 Ga0207694_10078450 3300025924 Bacteria 2589
86 Ga0207650_10051685 3300025925 Unclassified 3042
87 Ga0207664_10054009 3300025929 Unclassified 3182
88 Ga0207670_10001287 3300025936 Bacteria 13251
89 Ga0207670_10002090 3300025936 Bacteria 10437
90 Ga0207670_10013822 3300025936 Bacteria 4775
91 Ga0207691_10180104 3300025940 Bacteria 1847
92 Ga0207667_10005396 3300025949 Bacteria 15590
93 Ga0207667_10013020 3300025949 Bacteria 9548
94 Ga0207667_10031567 3300025949 Bacteria 5716
95 Ga0207651_10231510 3300025960 Unclassified 1500
96 Ga0207703_10176114 3300026035 Unclassified 1885
97 Ga0207703_10202891 3300026035 Unclassified 1763
98 Ga0207639_10000004 3300026041 Bacteria 698784
99 Ga0207641_10109257 3300026088 Bacteria 2449
100 Ga0207676_10111935 3300026095 Unclassified 2286
101 Ga0207674_10004741 3300026116 Bacteria 16306
102 Ga0207674_10067295 3300026116 Unclassified 3606
103 Ga0207683_10088271 3300026121 Bacteria 2759
104 Ga0207428_10004142 3300027907 Bacteria 13906
105 Ga0268266_10049789 3300028379 Bacteria 3594
106 Ga0268265_10057301 3300028380 Bacteria 2969
107 Ga0265338_10019164 3300028800 Bacteria 7281
108 Ga0265338_10030435 3300028800 Bacteria 5318
109 Ga0265320_10007171 3300031240 Bacteria 6945
110 Ga0265329_10002865 3300031242 Bacteria 7673
111 Ga0265314_10000169 3300031711 Bacteria 97094
112 Ga0373947_0079198 3300035725 Bacteria 2030
113 Ga0395905_0147321 3300037471 Unclassified 2215
114 Ga0436365_0424139 3300039437 Bacteria 3348
115 Ga0436365_1104520 3300039437 Bacteria 5371
116 Ga0451577_0001451 3300042876 Bacteria 31542
117 Ga0451576_0257567 3300045051 Bacteria 1824
118 Ga0451576_0330824 3300045051 Unclassified 1595
119 Ga0495651_0001215 3300046462 Bacteria 19893
120 Ga0495651_0064799 3300046462 Bacteria 2792
121 Ga0495580_0000890 3300046472 Bacteria 25966
122 Ga0495580_0037035 3300046472 Bacteria 3502
123 Ga0495580_0102745 3300046472 Bacteria 1987
124 Ga0495580_0113044 3300046472 Bacteria 1886
125 Ga0495664_0101690 3300046477 Unclassified 1732
126 Ga0495664_0190725 3300046477 Unclassified 1242
127 Ga0495628_0038093 3300046516 Bacteria 3851
128 Ga0495628_0052415 3300046516 Bacteria 3223
129 Ga0495628_0170852 3300046516 Bacteria 1648
130 Ga0495643_0000482 3300046522 Bacteria 50652
131 Ga0495652_0012644 3300046529 Bacteria 7606
132 Ga0495665_0020413 3300046531 Bacteria 3559
133 Ga0495640_0133327 3300046533 Bacteria 1606
134 Ga0495645_0171048 3300046543 Bacteria 1496
135 Ga0495667_0005513 3300046559 Bacteria 8553
136 Ga0495667_0025237 3300046559 Unclassified 4006
137 Ga0495634_0055793 3300046642 Bacteria 2641
138 Ga0495635_0181410 3300046663 Bacteria 1431
139 Ga0495599_0029767 3300046678 Unclassified 3424
140 Ga0495599_0056705 3300046678 Bacteria 2452
141 Ga0495599_0088903 3300046678 Bacteria 1928
142 Ga0495623_0003826 3300046679 Bacteria 9916
143 Ga0495623_0105710 3300046679 Bacteria 1711
144 Ga0495646_0141155 3300046680 Bacteria 1347
145 Ga0495658_0006042 3300046683 Bacteria 5947
146 Ga0495613_0149820 3300046689 Bacteria 1664
147 Ga0495581_0034842 3300047315 Unclassified 2913
148 Ga0495604_0020639 3300047317 Bacteria 5260
149 Ga0495674_0009825 3300047319 Bacteria 9081
150 Ga0495674_0038595 3300047319 Bacteria 4286
151 Ga0495674_0154639 3300047319 Bacteria 1922
152 Ga0495680_0082433 3300047322 Bacteria 2427
153 Ga0495684_0001069 3300047471 Bacteria 22159
154 Ga0495684_0017064 3300047471 Bacteria 5592
155 Ga0495684_0237731 3300047471 Unclassified 1330
156 Ga0495602_0017673 3300048088 Bacteria 7144
157 Ga0495602_0095560 3300048088 Bacteria 2453
158 Ga0496126_0145505 3300048929 Unclassified 2036
159 Ga0501047_0162855 3300049581 Bacteria 2102
160 nmdc:mga05p37_155537_c1 3300050507 Bacteria 2794
161 nmdc:mga05p37_168454_c1 3300050507 Unclassified 2672
162 nmdc:mga09592_289364_c1 3300050508 Bacteria 1420
163 nmdc:mga0qj67_143325_c1 3300050509 Bacteria 1937
164 nmdc:mga06r32_159798_c1 3300050510 Unclassified 2235
165 nmdc:mga06r32_194208_c1 3300050510 Bacteria 2017
166 nmdc:mga06r32_285545_c1 3300050510 Unclassified 1637
167 nmdc:mga06r32_6651_c1 3300050510 Bacteria 5411
168 nmdc:mga08y16_36843_c1 3300050511 Bacteria 5136
169 nmdc:mga08y16_3870_c1 3300050511 Bacteria 15573
170 nmdc:mga0n895_314825_c1 3300050512 Bacteria 1586
171 Ga0495601_0090041 3300053077 Bacteria 1973
172 Ga0501082_0005332 3300060353 Bacteria 11169

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300005340 Ga0070689_100021943 Ga0070689_1000219432 349
2 3300025936 Ga0207670_10013822 Ga0207670_100138225 349
3 3300021384 Ga0213876_10009151 Ga0213876_100091516 361
4 3300031240 Ga0265320_10007171 Ga0265320_100071712 361
5 3300039437 Ga0436365_1104520 Ga0436365_1104520_2114_3205 361
6 3300046477 Ga0495664_0190725 Ga0495664_0190725_129_1220 361
7 3300046559 Ga0495667_0025237 Ga0495667_0025237_2890_3981 361
8 3300046689 Ga0495613_0149820 Ga0495613_0149820_517_1608 361
9 3300005563 Ga0068855_100285934 Ga0068855_1002859342 382
10 3300048929 Ga0496126_0145505 Ga0496126_0145505_594_1775 390
11 3300009093 Ga0105240_10000149 Ga0105240_1000014999 391
12 3300025913 Ga0207695_10000701 Ga0207695_100007017 391
13 3300006028 Ga0070717_10008887 Ga0070717_100088876 395
14 3300005544 Ga0070686_100209792 Ga0070686_1002097921 396
15 3300014969 Ga0157376_10153641 Ga0157376_101536411 398
16 3300046477 Ga0495664_0101690 Ga0495664_0101690_183_1385 398
17 3300053077 Ga0495601_0090041 Ga0495601_0090041_525_1826 398
18 3300005937 Ga0081455_10052179 Ga0081455_100521792 399
19 3300046516 Ga0495628_0170852 Ga0495628_0170852_175_1377 399
20 3300006847 Ga0075431_100035070 Ga0075431_1000350702 400
21 3300009147 Ga0114129_10175293 Ga0114129_101752932 400
22 3300025298 Ga0209050_1000324 Ga0209050_10003242 400
23 3300039437 Ga0436365_0424139 Ga0436365_0424139_2025_3266 400
24 3300042876 Ga0451577_0001451 Ga0451577_0001451_24459_25691 400
25 3300050507 nmdc:mga05p37_155537_c1 nmdc:mga05p37_155537_c1_1465_2712 400
26 3300050508 nmdc:mga09592_289364_c1 nmdc:mga09592_289364_c1_93_1316 400
27 3300050509 nmdc:mga0qj67_143325_c1 nmdc:mga0qj67_143325_c1_98_1339 400
28 3300050510 nmdc:mga06r32_159798_c1 nmdc:mga06r32_159798_c1_297_1544 400
29 3300050510 nmdc:mga06r32_194208_c1 nmdc:mga06r32_194208_c1_255_1496 400
30 3300005336 Ga0070680_100063338 Ga0070680_1000633383 401
31 3300005435 Ga0070714_100093202 Ga0070714_1000932023 401
32 3300005438 Ga0070701_10034854 Ga0070701_100348543 401
33 3300005468 Ga0070707_100002865 Ga0070707_1000028658 401
34 3300005543 Ga0070672_100150719 Ga0070672_1001507192 401
35 3300005544 Ga0070686_100014674 Ga0070686_1000146742 401
36 3300005616 Ga0068852_100069341 Ga0068852_1000693414 401
37 3300005616 Ga0068852_100204008 Ga0068852_1002040082 401
38 3300006847 Ga0075431_100032366 Ga0075431_1000323662 401
39 3300006847 Ga0075431_100211365 Ga0075431_1002113652 401
40 3300009094 Ga0111539_10001479 Ga0111539_1000147912 401
41 3300009147 Ga0114129_10037252 Ga0114129_100372521 401
42 3300009147 Ga0114129_10325735 Ga0114129_103257352 401
43 3300009174 Ga0105241_10113071 Ga0105241_101130712 401
44 3300009545 Ga0105237_10086178 Ga0105237_100861782 401
45 3300013105 Ga0157369_10014074 Ga0157369_100140745 401
46 3300013307 Ga0157372_10046447 Ga0157372_100464472 401
47 3300025913 Ga0207695_10005708 Ga0207695_100057089 401
48 3300025922 Ga0207646_10003962 Ga0207646_100039628 401
49 3300025940 Ga0207691_10180104 Ga0207691_101801042 401
50 3300027907 Ga0207428_10004142 Ga0207428_100041423 401
51 3300028379 Ga0268266_10049789 Ga0268266_100497893 401
52 3300046516 Ga0495628_0038093 Ga0495628_0038093_2011_3225 401
53 3300046642 Ga0495634_0055793 Ga0495634_0055793_1047_2258 401
54 3300046678 Ga0495599_0056705 Ga0495599_0056705_333_1547 401
55 3300050507 nmdc:mga05p37_168454_c1 nmdc:mga05p37_168454_c1_273_1517 401
56 3300050510 nmdc:mga06r32_285545_c1 nmdc:mga06r32_285545_c1_221_1459 401
57 3300050510 nmdc:mga06r32_6651_c1 nmdc:mga06r32_6651_c1_1600_2844 401
58 3300050511 nmdc:mga08y16_3870_c1 nmdc:mga08y16_3870_c1_4990_6237 401
59 3300005329 Ga0070683_100186039 Ga0070683_1001860392 402
60 3300005354 Ga0070675_100104213 Ga0070675_1001042131 402
61 3300005539 Ga0068853_100000009 Ga0068853_100000009141 402
62 3300005563 Ga0068855_100106586 Ga0068855_1001065862 402
63 3300005577 Ga0068857_100209053 Ga0068857_1002090532 402
64 3300005841 Ga0068863_100226251 Ga0068863_1002262512 402
65 3300006880 Ga0075429_100186995 Ga0075429_1001869952 402
66 3300009098 Ga0105245_10087387 Ga0105245_100873873 402
67 3300009177 Ga0105248_10215271 Ga0105248_102152712 402
68 3300026041 Ga0207639_10000004 Ga0207639_10000004403 402
69 3300026088 Ga0207641_10109257 Ga0207641_101092571 402
70 3300026116 Ga0207674_10004741 Ga0207674_1000474112 402
71 3300035725 Ga0373947_0079198 Ga0373947_0079198_756_1982 402
72 3300046472 Ga0495580_0113044 Ga0495580_0113044_564_1790 402
73 3300046663 Ga0495635_0181410 Ga0495635_0181410_14_1240 402
74 3300046680 Ga0495646_0141155 Ga0495646_0141155_66_1292 402
75 3300047319 Ga0495674_0038595 Ga0495674_0038595_2891_4117 402
76 3300047471 Ga0495684_0017064 Ga0495684_0017064_110_1336 402
77 3300049581 Ga0501047_0162855 Ga0501047_0162855_142_1431 402
78 3300005327 Ga0070658_10011981 Ga0070658_100119813 403
79 3300005339 Ga0070660_100018968 Ga0070660_1000189684 403
80 3300005340 Ga0070689_100003187 Ga0070689_1000031873 403
81 3300005364 Ga0070673_100282454 Ga0070673_1002824541 403
82 3300005365 Ga0070688_100014458 Ga0070688_1000144582 403
83 3300005466 Ga0070685_10062781 Ga0070685_100627811 403
84 3300005841 Ga0068863_100185853 Ga0068863_1001858532 403
85 3300006028 Ga0070717_10109768 Ga0070717_101097683 403
86 3300009093 Ga0105240_10068777 Ga0105240_100687772 403
87 3300009545 Ga0105237_10007007 Ga0105237_100070076 403
88 3300025909 Ga0207705_10134525 Ga0207705_101345252 403
89 3300025913 Ga0207695_10234485 Ga0207695_102344852 403
90 3300025914 Ga0207671_10016713 Ga0207671_100167133 403
91 3300025929 Ga0207664_10054009 Ga0207664_100540092 403
92 3300025936 Ga0207670_10002090 Ga0207670_100020903 403
93 3300025949 Ga0207667_10013020 Ga0207667_100130207 403
94 3300025960 Ga0207651_10231510 Ga0207651_102315102 403
95 3300026035 Ga0207703_10202891 Ga0207703_102028911 403
96 3300037471 Ga0395905_0147321 Ga0395905_0147321_474_1712 403
97 3300045051 Ga0451576_0257567 Ga0451576_0257567_249_1580 403
98 3300046543 Ga0495645_0171048 Ga0495645_0171048_16_1245 403
99 3300046683 Ga0495658_0006042 Ga0495658_0006042_2617_3888 403
100 3300060353 Ga0501082_0005332 Ga0501082_0005332_2692_3936 403
101 3300005327 Ga0070658_10000390 Ga0070658_1000039025 404
102 3300005327 Ga0070658_10237414 Ga0070658_102374141 404
103 3300005329 Ga0070683_100014023 Ga0070683_1000140233 404
104 3300005340 Ga0070689_100057790 Ga0070689_1000577902 404
105 3300005545 Ga0070695_100130600 Ga0070695_1001306002 404
106 3300005563 Ga0068855_100001704 Ga0068855_10000170413 404
107 3300009093 Ga0105240_10001210 Ga0105240_1000121022 404
108 3300009093 Ga0105240_10003661 Ga0105240_100036619 404
109 3300009093 Ga0105240_10069605 Ga0105240_100696054 404
110 3300009093 Ga0105240_10095071 Ga0105240_100950712 404
111 3300009147 Ga0114129_10259302 Ga0114129_102593022 404
112 3300009545 Ga0105237_10001738 Ga0105237_1000173811 404
113 3300009545 Ga0105237_10075000 Ga0105237_100750002 404
114 3300009545 Ga0105237_10127317 Ga0105237_101273172 404
115 3300010375 Ga0105239_10003159 Ga0105239_100031591 404
116 3300013105 Ga0157369_10169249 Ga0157369_101692492 404
117 3300013297 Ga0157378_10037563 Ga0157378_100375634 404
118 3300014325 Ga0163163_10315250 Ga0163163_103152501 404
119 3300014969 Ga0157376_10034591 Ga0157376_100345913 404
120 3300014969 Ga0157376_10061578 Ga0157376_100615782 404
121 3300025909 Ga0207705_10001514 Ga0207705_100015147 404
122 3300025913 Ga0207695_10034563 Ga0207695_100345634 404
123 3300025913 Ga0207695_10066280 Ga0207695_100662802 404
124 3300025914 Ga0207671_10046484 Ga0207671_100464842 404
125 3300025914 Ga0207671_10089352 Ga0207671_100893522 404
126 3300025924 Ga0207694_10078450 Ga0207694_100784502 404
127 3300025925 Ga0207650_10051685 Ga0207650_100516852 404
128 3300025949 Ga0207667_10005396 Ga0207667_100053962 404
129 3300025949 Ga0207667_10031567 Ga0207667_100315673 404
130 3300026035 Ga0207703_10176114 Ga0207703_101761142 404
131 3300026095 Ga0207676_10111935 Ga0207676_101119351 404
132 3300026121 Ga0207683_10088271 Ga0207683_100882714 404
133 3300028800 Ga0265338_10030435 Ga0265338_100304353 404
134 3300045051 Ga0451576_0330824 Ga0451576_0330824_270_1529 404
135 3300046462 Ga0495651_0001215 Ga0495651_0001215_2779_4026 404
136 3300046462 Ga0495651_0064799 Ga0495651_0064799_1268_2515 404
137 3300046472 Ga0495580_0000890 Ga0495580_0000890_12024_13253 404
138 3300046472 Ga0495580_0037035 Ga0495580_0037035_266_1513 404
139 3300046472 Ga0495580_0102745 Ga0495580_0102745_590_1852 404
140 3300046516 Ga0495628_0052415 Ga0495628_0052415_23_1273 404
141 3300046529 Ga0495652_0012644 Ga0495652_0012644_4125_5372 404
142 3300046531 Ga0495665_0020413 Ga0495665_0020413_1923_3170 404
143 3300046533 Ga0495640_0133327 Ga0495640_0133327_155_1402 404
144 3300046559 Ga0495667_0005513 Ga0495667_0005513_2217_3464 404
145 3300046678 Ga0495599_0088903 Ga0495599_0088903_66_1313 404
146 3300046679 Ga0495623_0003826 Ga0495623_0003826_8559_9806 404
147 3300046679 Ga0495623_0105710 Ga0495623_0105710_329_1576 404
148 3300047315 Ga0495581_0034842 Ga0495581_0034842_240_1487 404
149 3300047317 Ga0495604_0020639 Ga0495604_0020639_2652_3899 404
150 3300047319 Ga0495674_0009825 Ga0495674_0009825_2623_3873 404
151 3300047319 Ga0495674_0154639 Ga0495674_0154639_346_1593 404
152 3300047322 Ga0495680_0082433 Ga0495680_0082433_554_1801 404
153 3300047471 Ga0495684_0001069 Ga0495684_0001069_13596_14843 404
154 3300047471 Ga0495684_0237731 Ga0495684_0237731_65_1312 404
155 3300048088 Ga0495602_0017673 Ga0495602_0017673_3832_5079 404
156 3300048088 Ga0495602_0095560 Ga0495602_0095560_1185_2432 404
157 3300005340 Ga0070689_100003102 Ga0070689_1000031027 405
158 3300013105 Ga0157369_10050974 Ga0157369_100509743 405
159 3300025913 Ga0207695_10000773 Ga0207695_1000077330 405
160 3300025936 Ga0207670_10001287 Ga0207670_100012874 405
161 3300026116 Ga0207674_10067295 Ga0207674_100672952 405
162 3300028380 Ga0268265_10057301 Ga0268265_100573012 405
163 3300046522 Ga0495643_0000482 Ga0495643_0000482_36424_37686 405
164 3300028800 Ga0265338_10019164 Ga0265338_100191642 406
165 3300031711 Ga0265314_10000169 Ga0265314_1000016940 406
166 3300046678 Ga0495599_0029767 Ga0495599_0029767_1802_3079 406
167 3300050511 nmdc:mga08y16_36843_c1 nmdc:mga08y16_36843_c1_213_1451 406
168 3300006237 Ga0097621_100033588 Ga0097621_1000335883 407
169 3300013308 Ga0157375_10000058 Ga0157375_1000005832 408
170 3300005295 Ga0065707_10105998 Ga0065707_101059983 409
171 3300031242 Ga0265329_10002865 Ga0265329_100028656 409
172 3300050512 nmdc:mga0n895_314825_c1 nmdc:mga0n895_314825_c1_68_1372 409

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00144

Beta-lactamase

Beta-lactamase

126

422

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
5tgf-assembly3.cif.gz_C crystal structure of putative beta-lactamase from bacteroides dorei dsm 17855 0.761 44 353
2zm7-assembly1.cif.gz_A structure of 6-aminohexanoate-dimer hydrolase, s112a/g181d mutant complexed with 6-aminohexanoate-dimer 0.7442 46 353
3vwl-assembly1.cif.gz_A-2 crystal structure of 6-aminohexanoate-dimer hydrolase g181d/r187s/h266n/d370y mutant 0.7432 38 353
2e8i-assembly1.cif.gz_A structure of 6-aminohexanoate-dimer hydrolase, d1 mutant 0.742 29 353
1wyc-assembly1.cif.gz_A structure of 6-aminohexanoate-dimer hydrolase, dn mutant 0.7415 29 353
ID Description Score Start End Superfamily
af_P77619_23_410_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.7564 39 360 3.40.710.10
af_P9WLZ3_5_376_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.7501 47 355 3.40.710.10
4ivkA00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.7405 41 353 3.40.710.10
4gb7A00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.7358 53 352 3.40.710.10
af_P71981_7_386_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.7338 49 352 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A4Q3C3L4-F1-model_v4 deleted 0.9842 34 385
AF-A0A7W9W9F8-F1-model_v4 CubicO group peptidase (Beta-lactamase class C family) 0.9759 18 409
AF-A0A257X720-F1-model_v4 Serine hydrolase 0.9745 60 407 GO:0016787
AF-A0A2V5X6C2-F1-model_v4 Serine hydrolase 0.9734 1 334 GO:0016787
AF-A0A7W9W9F8-F1-model_v4 CubicO group peptidase (Beta-lactamase class C family) 0.9685 18 409

Feature Viewer

pLDDT pTM Quality
92.09 0.91 High
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Predicted Structure (AlphaFold2)

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