F262091

General Info

Members Datasets Scaffolds Average Seq Length
173 128 346 778

Family's Representative Sequence

Representative Sequence 3300005355|Ga0070671_100036607|Ga0070671_1000366072
Length 849
Sequence MDDNPRSVRCCKANRGNSVQKYTRGFPRFRQGERANRSGFIFAVQRETLGHLRCCVDVTQSFAHGVFMNQLTHTGEFAFRGASAEVRSLFEPAEPQAVAPMTLALVGNFAPRKCGIATFTTDIFEKLREHHPEIAADIYALDDPRAPLTYEGVAGTIACDDPEAYARAARQINESGADVVWLQHEYGIFGGPDGEMVIDFVDRLAAPLVVTLHTVLTAPSERQHAILSHLLTRASRIMVMSHHSRDLLVQHYGARAGVVEVIEHGAPDRPFGRVEEFKERLGLGGRKVLMTFGLLGPGKGLEHAIRALPAIAGRHPEVLYRIVGATHPNLVARDGEAYRERLMALAEDLGVAQHIAWDNRFLDTPELLDQLEACDIYLTPYPNLQQSTSGTLSYAVALGKAVISTPYVHARELLADDVGQLIEADSSDAIANAVNALLDAPDELAAMQLRAWTRGRETIWPRFAEASARLASAAVAPAPQIPSVKAIPGLSAVLAMSDATGMLQHSVGVVPDRRHGYCLDDNARALQLMNVAQGISPAERLKWSCAYAAFVQFAWNPDLGRFRNFMNFDRSWCEDEGSEDSNGRAVWALGHTFERAPDEGLREWARRLYDEVLPTVSTVGSPRAMAFAMLGACAVLRVEPEDAASRRLVEQGGDFLMRVLGQGRRPDWAWFEAVLGYDNPRLSQALIEAGMAAGREEWIGAGLETLEWICRQQVSAKEQFRPIGSESFHKPHSYLPFDQQPLEAQAAVEAAQAAWRATGGTFWLDHARTAYQWFFGGNDRGVVLADIATGRCRDGVTPRGVNINTGAESILAFQLSHYALMELALEAPQYLLGASRNGGSLEPARERLV

Samples

Sample ID Description Type Environment
1 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
28 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
29 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
30 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
66 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
67 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
68 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
69 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
70 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
71 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
72 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
73 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
74 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
75 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
76 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
77 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
78 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
79 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
80 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
81 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
82 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
83 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
84 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
85 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
86 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
87 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
88 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
89 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
90 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
91 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
92 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
93 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
94 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
95 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
96 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
97 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
98 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
102 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
103 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
104 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
105 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
106 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
107 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
108 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
109 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
110 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
111 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
112 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
113 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
114 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
115 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
116 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
117 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
118 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
119 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
120 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
121 2643221560 Sphingopyxis sp. Root1497 Isolate Unclassified
122 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
123 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
124 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
125 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
126 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
127 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere
128 8054302542 Novosphingobium kaempferiae Sx8-5 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.64
Metatranscriptomes 0
Isolates 6.36

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.08
Nodule 0.58
Rhizoplane 5.2
Rhizosphere 62.43
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070671_100036607 3300005355 Bacteria 4070
2 Ga0065704_10073958 3300005289 Bacteria 6641
3 Ga0065704_10075330 3300005289 Bacteria 5655
4 Ga0065707_10083930 3300005295 Bacteria 7957
5 Ga0070658_10000350 3300005327 Bacteria 39927
6 Ga0070658_10005076 3300005327 Bacteria 10709
7 Ga0070666_10015459 3300005335 Bacteria 4870
8 Ga0070660_100006558 3300005339 Bacteria 8074
9 Ga0070661_100004384 3300005344 Bacteria 9732
10 Ga0070669_100000181 3300005353 Bacteria 55105
11 Ga0070669_100000500 3300005353 Bacteria 29519
12 Ga0070671_100000092 3300005355 Bacteria 57744
13 Ga0070671_100000198 3300005355 Bacteria 40255
14 Ga0070671_100013038 3300005355 Bacteria 6700
15 Ga0070659_100002634 3300005366 Bacteria 12770
16 Ga0070667_100000167 3300005367 Bacteria 82055
17 Ga0070662_100016876 3300005457 Bacteria 4908
18 Ga0070681_10030095 3300005458 Bacteria 5447
19 Ga0070679_100007083 3300005530 Bacteria 10463
20 Ga0068853_100043226 3300005539 Bacteria 3855
21 Ga0070665_100000538 3300005548 Bacteria 53355
22 Ga0068855_100020537 3300005563 Bacteria 7920
23 Ga0068855_100037640 3300005563 Bacteria 5752
24 Ga0068855_100090330 3300005563 Bacteria 3535
25 Ga0070664_100034705 3300005564 Bacteria 4232
26 Ga0068854_100001739 3300005578 Bacteria 13293
27 Ga0068852_100000114 3300005616 Bacteria 54476
28 Ga0068852_100027148 3300005616 Bacteria 4663
29 Ga0068852_100060526 3300005616 Bacteria 3287
30 Ga0068864_100036620 3300005618 Bacteria 4183
31 Ga0068863_100007473 3300005841 Bacteria 10695
32 Ga0068858_100014964 3300005842 Bacteria 7300
33 Ga0068858_100053506 3300005842 Bacteria 3734
34 Ga0068860_100007076 3300005843 Bacteria 11230
35 Ga0068862_100001660 3300005844 Bacteria 20226
36 Ga0068862_100035651 3300005844 Bacteria 4215
37 Ga0075363_100008929 3300006048 Bacteria 4692
38 Ga0075364_10011670 3300006051 Bacteria 5343
39 Ga0075364_10015240 3300006051 Bacteria 4764
40 Ga0075362_10007596 3300006177 Bacteria 4116
41 Ga0075369_10000349 3300006186 Bacteria 13758
42 Ga0079104_1009965 3300006946 Bacteria 3170
43 Ga0105251_10006138 3300009011 Bacteria 7739
44 Ga0105238_10020947 3300009551 Bacteria 6661
45 Ga0105246_10001424 3300011119 Bacteria 14166
46 Ga0157373_10003400 3300013100 Bacteria 12039
47 Ga0157370_10006520 3300013104 Bacteria 12851
48 Ga0157369_10000762 3300013105 Bacteria 41569
49 Ga0157372_10002195 3300013307 Bacteria 21222
50 Ga0183363_1002 3300015690 Bacteria 425040
51 Ga0163161_10001177 3300017792 Bacteria 19637
52 Ga0209675_1000126 3300025291 Bacteria 104792
53 Ga0209676_1000566 3300025292 Bacteria 55814
54 Ga0209050_1000047 3300025298 Bacteria 380561
55 Ga0207705_10000009 3300025909 Bacteria 576128
56 Ga0207705_10043988 3300025909 Bacteria 3208
57 Ga0207660_10004689 3300025917 Bacteria 8899
58 Ga0207657_10000123 3300025919 Bacteria 77348
59 Ga0207652_10001766 3300025921 Bacteria 18870
60 Ga0207652_10047317 3300025921 Bacteria 3674
61 Ga0207681_10000723 3300025923 Bacteria 21682
62 Ga0207681_10000801 3300025923 Bacteria 20710
63 Ga0207644_10000005 3300025931 Bacteria 441948
64 Ga0207644_10013303 3300025931 Bacteria 5482
65 Ga0207644_10023609 3300025931 Bacteria 4215
66 Ga0207690_10000544 3300025932 Bacteria 24602
67 Ga0207706_10000193 3300025933 Bacteria 68202
68 Ga0207706_10005998 3300025933 Bacteria 11298
69 Ga0207706_10014763 3300025933 Bacteria 7070
70 Ga0207711_10007102 3300025941 Bacteria 9381
71 Ga0207667_10018938 3300025949 Bacteria 7699
72 Ga0207667_10032651 3300025949 Bacteria 5606
73 Ga0207667_10053474 3300025949 Bacteria 4249
74 Ga0207640_10000549 3300025981 Bacteria 22503
75 Ga0207658_10000742 3300025986 Bacteria 28124
76 Ga0207703_10007735 3300026035 Bacteria 8507
77 Ga0207703_10032141 3300026035 Bacteria 4153
78 Ga0207639_10000804 3300026041 Bacteria 21326
79 Ga0207641_10037004 3300026088 Bacteria 4075
80 Ga0207674_10049382 3300026116 Bacteria 4303
81 Ga0207698_10000085 3300026142 Bacteria 61596
82 Ga0209813_10000542 3300027866 Bacteria 8921
83 Ga0268266_10000499 3300028379 Bacteria 56016
84 Ga0268265_10010230 3300028380 Bacteria 6335
85 Ga0268265_10015563 3300028380 Bacteria 5207
86 Ga0268264_10004219 3300028381 Bacteria 12263
87 Ga0307517_10014263 3300028786 Bacteria 10697
88 Ga0307414_10052737 3300032004 Bacteria 2832
89 Ga0395905_0055577 3300037471 Bacteria 3705
90 Ga0495627_004786 3300046453 Bacteria 5593
91 Ga0495650_0000342 3300046471 Bacteria 83141
92 Ga0495650_0000629 3300046471 Bacteria 47390
93 Ga0495596_0000045 3300046500 Bacteria 89699
94 Ga0495596_0000718 3300046500 Bacteria 20460
95 Ga0495583_0000420 3300046506 Bacteria 64084
96 Ga0495610_0000022 3300046512 Bacteria 317107
97 Ga0495610_0000604 3300046512 Bacteria 35531
98 Ga0495610_0006326 3300046512 Bacteria 8192
99 Ga0495643_0000023 3300046522 Bacteria 288590
100 Ga0495643_0001796 3300046522 Bacteria 18364
101 Ga0495609_0005461 3300046538 Bacteria 6669
102 Ga0495622_0001887 3300046557 Bacteria 10312
103 Ga0495625_0006530 3300046660 Bacteria 10360
104 Ga0495661_0035085 3300046665 Bacteria 3152
105 Ga0495600_0003801 3300046809 Bacteria 8942
106 Ga0495681_0000010 3300047470 Bacteria 203548
107 Ga0495686_0031083 3300047472 Bacteria 3465
108 Ga0495615_0000068 3300048090 Bacteria 33177
109 Ga0495626_0000395 3300048091 Bacteria 44958
110 Ga0496101_0073262 3300048904 Bacteria 2516
111 Ga0496103_0012546 3300048906 Bacteria 5025
112 Ga0496106_0000822 3300048909 Bacteria 22502
113 Ga0496107_0001578 3300048910 Bacteria 14175
114 Ga0496110_0063761 3300048913 Bacteria 3256
115 Ga0496111_0038030 3300048914 Bacteria 3446
116 Ga0496113_0015398 3300048916 Bacteria 5254
117 Ga0496114_0024771 3300048917 Bacteria 4899
118 Ga0496114_0026404 3300048917 Bacteria 4754
119 Ga0496116_0000035 3300048919 Bacteria 402424
120 Ga0496117_0040331 3300048920 Bacteria 3434
121 Ga0496120_0035301 3300048923 Bacteria 2988
122 Ga0496121_0000022 3300048924 Bacteria 472849
123 Ga0496121_0004287 3300048924 Bacteria 19346
124 Ga0496121_0007405 3300048924 Bacteria 13267
125 Ga0496122_0002909 3300048925 Bacteria 23395
126 Ga0496122_0029134 3300048925 Bacteria 4664
127 Ga0496123_0001078 3300048926 Bacteria 41189
128 Ga0496123_0005359 3300048926 Bacteria 12952
129 Ga0496124_0010785 3300048927 Bacteria 9208
130 Ga0496124_0011280 3300048927 Bacteria 8946
131 Ga0496124_0042921 3300048927 Bacteria 3890
132 Ga0496125_0020726 3300048928 Bacteria 6162
133 Ga0496126_0000077 3300048929 Bacteria 231592
134 Ga0501033_0000507 3300049570 Bacteria 36643
135 Ga0501033_0021899 3300049570 Bacteria 4823
136 Ga0501035_0010839 3300049822 Bacteria 8441
137 Ga0501044_0000160 3300049823 Bacteria 83543
138 Ga0501044_0001426 3300049823 Bacteria 28054
139 nmdc:mga03683_1021_c1 3300050489 Bacteria 8174
140 nmdc:mga03683_2256_c1 3300050489 Bacteria 5948
141 nmdc:mga03n38_4210_c1 3300050490 Bacteria 4733
142 nmdc:mga00v17_2125_c1 3300050491 Bacteria 10186
143 nmdc:mga0k408_2710_c1 3300050493 Bacteria 9401
144 nmdc:mga0k408_45099_c1 3300050493 Bacteria 2543
145 nmdc:mga06z11_555_c1 3300050494 Bacteria 13695
146 nmdc:mga04h51_207_c1 3300050495 Bacteria 15867
147 nmdc:mga07m45_1050_c1 3300050496 Bacteria 12303
148 nmdc:mga07m45_72_c1 3300050496 Bacteria 38126
149 nmdc:mga0sz30_214_c1 3300050516 Bacteria 21913
150 nmdc:mga0sz30_35_c2 3300050516 Bacteria 13765
151 Ga0500643_004278 3300053087 Bacteria 6526
152 Ga0500595_001634 3300053119 Bacteria 11770
153 Ga0500607_000319 3300053121 Bacteria 45550
154 Ga0500607_002160 3300053121 Bacteria 16344
155 Ga0500618_000799 3300053125 Bacteria 17401
156 Ga0500559_0000332 3300053136 Bacteria 35482
157 Ga0500622_0018748 3300053156 Bacteria 3676
158 Ga0500624_000610 3300053157 Bacteria 9770
159 Ga0500636_0000413 3300053177 Bacteria 23522
160 Ga0500645_000691 3300053730 Bacteria 20965
161 Ga0500645_014510 3300053730 Bacteria 2508
162 Ga0500596_002639 3300053735 Bacteria 3520
163 2511127449 2510917021 Bacteria 5705459
164 2643726950 2643221541 Bacteria 5498788
165 2643822611 2643221560 Bacteria 4801179
166 2644046008 2643221606 Bacteria 5588032
167 2644393181 2643221671 Bacteria 5496681
168 2819552277 2818991438 Bacteria 5793701
169 2848298777 2848297114 Bacteria 3608511
170 2852656810 2852653556 Bacteria 4050083
171 2919142392 2919138771 Bacteria 5281312
172 8054307166 8054302542 Bacteria 5698134
173 8054307235 8054302542 Bacteria 5698134
174 Ga0070671_100036607
175 Ga0065704_10073958
176 Ga0065704_10075330
177 Ga0065707_10083930
178 Ga0070658_10000350
179 Ga0070658_10005076
180 Ga0070666_10015459
181 Ga0070660_100006558
182 Ga0070661_100004384
183 Ga0070669_100000181
184 Ga0070669_100000500
185 Ga0070671_100000092
186 Ga0070671_100000198
187 Ga0070671_100013038
188 Ga0070659_100002634
189 Ga0070667_100000167
190 Ga0070662_100016876
191 Ga0070681_10030095
192 Ga0070679_100007083
193 Ga0068853_100043226
194 Ga0070665_100000538
195 Ga0068855_100020537
196 Ga0068855_100037640
197 Ga0068855_100090330
198 Ga0070664_100034705
199 Ga0068854_100001739
200 Ga0068852_100000114
201 Ga0068852_100027148
202 Ga0068852_100060526
203 Ga0068864_100036620
204 Ga0068863_100007473
205 Ga0068858_100014964
206 Ga0068858_100053506
207 Ga0068860_100007076
208 Ga0068862_100001660
209 Ga0068862_100035651
210 Ga0075363_100008929
211 Ga0075364_10011670
212 Ga0075364_10015240
213 Ga0075362_10007596
214 Ga0075369_10000349
215 Ga0079104_1009965
216 Ga0105251_10006138
217 Ga0105238_10020947
218 Ga0105246_10001424
219 Ga0157373_10003400
220 Ga0157370_10006520
221 Ga0157369_10000762
222 Ga0157372_10002195
223 Ga0183363_1002
224 Ga0163161_10001177
225 Ga0209675_1000126
226 Ga0209676_1000566
227 Ga0209050_1000047
228 Ga0207705_10000009
229 Ga0207705_10043988
230 Ga0207660_10004689
231 Ga0207657_10000123
232 Ga0207652_10001766
233 Ga0207652_10047317
234 Ga0207681_10000723
235 Ga0207681_10000801
236 Ga0207644_10000005
237 Ga0207644_10013303
238 Ga0207644_10023609
239 Ga0207690_10000544
240 Ga0207706_10000193
241 Ga0207706_10005998
242 Ga0207706_10014763
243 Ga0207711_10007102
244 Ga0207667_10018938
245 Ga0207667_10032651
246 Ga0207667_10053474
247 Ga0207640_10000549
248 Ga0207658_10000742
249 Ga0207703_10007735
250 Ga0207703_10032141
251 Ga0207639_10000804
252 Ga0207641_10037004
253 Ga0207674_10049382
254 Ga0207698_10000085
255 Ga0209813_10000542
256 Ga0268266_10000499
257 Ga0268265_10010230
258 Ga0268265_10015563
259 Ga0268264_10004219
260 Ga0307517_10014263
261 Ga0307414_10052737
262 Ga0395905_0055577
263 Ga0495627_004786
264 Ga0495650_0000342
265 Ga0495650_0000629
266 Ga0495596_0000045
267 Ga0495596_0000718
268 Ga0495583_0000420
269 Ga0495610_0000022
270 Ga0495610_0000604
271 Ga0495610_0006326
272 Ga0495643_0000023
273 Ga0495643_0001796
274 Ga0495609_0005461
275 Ga0495622_0001887
276 Ga0495625_0006530
277 Ga0495661_0035085
278 Ga0495600_0003801
279 Ga0495681_0000010
280 Ga0495686_0031083
281 Ga0495615_0000068
282 Ga0495626_0000395
283 Ga0496101_0073262
284 Ga0496103_0012546
285 Ga0496106_0000822
286 Ga0496107_0001578
287 Ga0496110_0063761
288 Ga0496111_0038030
289 Ga0496113_0015398
290 Ga0496114_0024771
291 Ga0496114_0026404
292 Ga0496116_0000035
293 Ga0496117_0040331
294 Ga0496120_0035301
295 Ga0496121_0000022
296 Ga0496121_0004287
297 Ga0496121_0007405
298 Ga0496122_0002909
299 Ga0496122_0029134
300 Ga0496123_0001078
301 Ga0496123_0005359
302 Ga0496124_0010785
303 Ga0496124_0011280
304 Ga0496124_0042921
305 Ga0496125_0020726
306 Ga0496126_0000077
307 Ga0501033_0000507
308 Ga0501033_0021899
309 Ga0501035_0010839
310 Ga0501044_0000160
311 Ga0501044_0001426
312 nmdc:mga03683_1021_c1
313 nmdc:mga03683_2256_c1
314 nmdc:mga03n38_4210_c1
315 nmdc:mga00v17_2125_c1
316 nmdc:mga0k408_2710_c1
317 nmdc:mga0k408_45099_c1
318 nmdc:mga06z11_555_c1
319 nmdc:mga04h51_207_c1
320 nmdc:mga07m45_1050_c1
321 nmdc:mga07m45_72_c1
322 nmdc:mga0sz30_214_c1
323 nmdc:mga0sz30_35_c2
324 Ga0500643_004278
325 Ga0500595_001634
326 Ga0500607_000319
327 Ga0500607_002160
328 Ga0500618_000799
329 Ga0500559_0000332
330 Ga0500622_0018748
331 Ga0500624_000610
332 Ga0500636_0000413
333 Ga0500645_000691
334 Ga0500645_014510
335 Ga0500596_002639
336 2511127449
337 2643726950
338 2643822611
339 2644046008
340 2644393181
341 2819552277
342 2848298777
343 2852656810
344 2919142392
345 8054307166
346 8054307235

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00534

Glycos_transf_1

Glycosyl transferases group 1

273

453

0.9

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

286

440

0.86

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

115

268

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5i45-assembly1.cif.gz_A 1.35 angstrom crystal structure of c-terminal domain of glycosyl transferase group 1 family protein (lpcc) from francisella tularensis. 0.8884 220 411
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8816 241 411
2f9f-assembly1.cif.gz_A crystal structure of the putative mannosyl transferase (wbaz-1)from archaeoglobus fulgidus, northeast structural genomics target gr29a. 0.8696 241 411
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8557 241 411
5i45-assembly1.cif.gz_A 1.35 angstrom crystal structure of c-terminal domain of glycosyl transferase group 1 family protein (lpcc) from francisella tularensis. 0.8341 220 411
ID Description Score Start End Superfamily
af_Q2G0L2_318_480_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9194 240 411 3.40.50.2000
af_P96407_190_356_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9062 239 409 3.40.50.2000
af_Q2G0L2_318_480_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8926 240 411 3.40.50.2000
af_G5ECB6_188_358_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8818 239 394 3.40.50.2000
af_Q2G0L3_321_481_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.8788 242 411 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A842SD45-F1-model_v4 Glycosyltransferase 0.9804 154 428 GO:0016757
AF-A0A1F8S9G2-F1-model_v4 Glycosyltransferase subfamily 4-like N-terminal domain-containing protein 0.9783 94 428 GO:0016758
AF-A0A817U496-F1-model_v4 Glycosyl transferase family 1 domain-containing protein 0.9749 182 427 GO:0016757
AF-A0A4R1UE92-F1-model_v4 Glycosyltransferase involved in cell wall biosynthesis 0.9742 49 428 GO:0016758
AF-A0A7V0I9N9-F1-model_v4 Glycosyltransferase 0.9729 52 428 GO:0016758

Map