F263127

General Info

Members Datasets Scaffolds Average Seq Length
173 134 346 418

Family's Representative Sequence

Representative Sequence 3300044694|Ga0466963_0080299|Ga0466963_0080299_23_1408
Length 461
Sequence MGRSADIPRLADPPATTDGADDTGCAILHVDMDAFFASVEMRRDPSLRGKPVIVGGGVRGVVAAASYEARRYGVRSAMPMSQALRLCPRAVVVPPTRGAYAEVSGQVMAIFRSVTPLVQPLSLDEAFLDVSSAARTFGSPAQIAREIRRRVAQELELTCSVGVAPTKFLAKVASARCKPDGMLVVPARSVLAFLHPLPVTALWGVGTRTGEALRRLGIRSIGDLAATPADTLRRAVGTATAEHLAALARGVDPRPVVPDEVEKSISAENTPDRDLTERAEVARELLRLSDEVARRLRSRSLVARTVGIKIRFADFTTTTRVRTLPTPTDSTAVVFTTAGELYDGLGLDRPRIRLVGVKAENLTDAGRVARQLSFDDLFGEGAADAGEADRSEPSTSAAVRAAEAAVDAARRRFGAGAVGVASVVGATGGSLQRAGRARVRDGVPESVLGGSPDPSRDRRGS

Samples

Sample ID Description Type Environment
1 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
38 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
39 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
64 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
65 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
66 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
67 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
70 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
73 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
74 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
77 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
78 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
79 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
82 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
83 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
84 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
85 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
86 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
87 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
88 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
89 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
90 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
91 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
101 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
102 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
103 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
104 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
105 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
106 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
107 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
108 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
112 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
113 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
114 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
115 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
116 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
117 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
118 2558860280 Kutzneria sp. 744 Isolate Unclassified
119 2582580736 Prauserella sp. Am3 Isolate Unclassified
120 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
121 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
122 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
123 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
124 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
125 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
126 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
127 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
128 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
129 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
130 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
131 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
132 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
133 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
134 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.6
Metatranscriptomes 0.58
Isolates 9.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.73
Nodule 0
Rhizoplane 1.73
Rhizosphere 84.39
Stem 0
Stem Tuber 0.58
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466963_0080299 3300044694 Bacteria 2208
2 JGI24737J22298_10009912 3300001990 Bacteria 3154
3 Ga0070658_10001535 3300005327 Bacteria 19566
4 Ga0070687_100019844 3300005343 Bacteria 3134
5 Ga0070668_100003128 3300005347 Bacteria 12230
6 Ga0070674_100129961 3300005356 Bacteria 1876
7 Ga0070674_100157075 3300005356 Bacteria 1722
8 Ga0070714_100002272 3300005435 Bacteria 14127
9 Ga0070714_100105613 3300005435 Bacteria 2487
10 Ga0070713_100159526 3300005436 Bacteria 2012
11 Ga0070711_100017574 3300005439 Bacteria 4556
12 Ga0070694_100023398 3300005444 Bacteria 3973
13 Ga0070678_100019227 3300005456 Bacteria 4448
14 Ga0070662_100019225 3300005457 Bacteria 4636
15 Ga0070672_100147159 3300005543 Bacteria 1947
16 Ga0070686_100037121 3300005544 Bacteria 3021
17 Ga0070695_100063559 3300005545 Bacteria 2399
18 Ga0070696_100038223 3300005546 Bacteria 3312
19 Ga0070693_100041442 3300005547 Bacteria 2590
20 Ga0070665_100118583 3300005548 Bacteria 2648
21 Ga0068855_100009670 3300005563 Bacteria 11636
22 Ga0068855_100084803 3300005563 Bacteria 3666
23 Ga0068856_100111097 3300005614 Bacteria 2738
24 Ga0068852_100060827 3300005616 Bacteria 3280
25 Ga0068852_100087504 3300005616 Bacteria 2780
26 Ga0068859_100073457 3300005617 Bacteria 3458
27 Ga0068864_100039996 3300005618 Bacteria 4010
28 Ga0068866_10014843 3300005718 Bacteria 3449
29 Ga0068860_100027534 3300005843 Bacteria 5473
30 Ga0068862_100042570 3300005844 Bacteria 3869
31 Ga0081455_10000025 3300005937 Bacteria 157583
32 Ga0081540_1001746 3300005983 Bacteria 18261
33 Ga0070717_10014036 3300006028 Bacteria 6156
34 Ga0070712_100085244 3300006175 Bacteria 2299
35 Ga0068865_100043022 3300006881 Bacteria 3084
36 Ga0097620_100073455 3300006931 Bacteria 3458
37 Ga0075435_100098838 3300007076 Bacteria 2416
38 Ga0105240_10165937 3300009093 Bacteria 2619
39 Ga0111539_10169256 3300009094 Bacteria 2553
40 Ga0105245_10007214 3300009098 Bacteria 9739
41 Ga0105241_10049106 3300009174 Bacteria 3212
42 Ga0105239_10052747 3300010375 Bacteria 4460
43 Ga0105246_10179811 3300011119 Bacteria 1628
44 Ga0157369_10109961 3300013105 Bacteria 2930
45 Ga0157378_10139670 3300013297 Bacteria 2249
46 Ga0206353_10308023 3300020082 Bacteria 12415
47 Ga0213875_10004850 3300021388 Bacteria 7306
48 Ga0207692_10000029 3300025898 Bacteria 47759
49 Ga0207642_10006985 3300025899 Bacteria 3785
50 Ga0207688_10012814 3300025901 Bacteria 4558
51 Ga0207705_10003499 3300025909 Bacteria 11954
52 Ga0207671_10043095 3300025914 Bacteria 3337
53 Ga0207693_10001320 3300025915 Bacteria 21976
54 Ga0207687_10087393 3300025927 Bacteria 2265
55 Ga0207687_10090073 3300025927 Bacteria 2235
56 Ga0207664_10004314 3300025929 Bacteria 9628
57 Ga0207706_10005345 3300025933 Bacteria 11968
58 Ga0207686_10086147 3300025934 Bacteria 2062
59 Ga0207669_10096154 3300025937 Bacteria 1943
60 Ga0207704_10095941 3300025938 Bacteria 1962
61 Ga0207711_10001595 3300025941 Bacteria 20962
62 Ga0207711_10101392 3300025941 Bacteria 2547
63 Ga0207667_10018413 3300025949 Bacteria 7832
64 Ga0207667_10127714 3300025949 Bacteria 2619
65 Ga0207667_10130413 3300025949 Bacteria 2589
66 Ga0207667_10140693 3300025949 Bacteria 2485
67 Ga0207678_10007117 3300026067 Bacteria 9924
68 Ga0207683_10000917 3300026121 Bacteria 27116
69 Ga0207683_10135899 3300026121 Bacteria 2213
70 Ga0268264_10080872 3300028381 Bacteria 2776
71 Ga0307512_10027619 3300030522 Bacteria 4990
72 Ga0307413_10101121 3300031824 Bacteria 1905
73 Ga0307518_10000373 3300031838 Bacteria 34211
74 Ga0307507_10008642 3300033179 Bacteria 13963
75 Ga0307510_10089244 3300033180 Bacteria 2936
76 Ga0373956_0000823 3300035119 Bacteria 12905
77 Ga0436364_1230354 3300037853 Bacteria 7522
78 Ga0466969_0005118 3300044656 Bacteria 6971
79 Ga0466969_0109112 3300044656 Bacteria 1297
80 Ga0466972_0003947 3300044658 Bacteria 7405
81 Ga0466972_0019475 3300044658 Bacteria 3392
82 Ga0466965_0005554 3300044683 Bacteria 5686
83 Ga0466965_0015393 3300044683 Bacteria 3634
84 Ga0466966_0003006 3300044684 Bacteria 11120
85 Ga0466966_0030150 3300044684 Bacteria 3524
86 Ga0466966_0035948 3300044684 Bacteria 3200
87 Ga0466966_0044083 3300044684 Bacteria 2857
88 Ga0466966_0090933 3300044684 Bacteria 1895
89 Ga0466961_0003647 3300044693 Bacteria 9598
90 Ga0466961_0003807 3300044693 Bacteria 9441
91 Ga0466961_0056445 3300044693 Bacteria 2502
92 Ga0466961_0065134 3300044693 Bacteria 2316
93 Ga0466961_0086343 3300044693 Bacteria 1983
94 Ga0466963_0002403 3300044694 Bacteria 10472
95 Ga0466963_0005883 3300044694 Bacteria 7226
96 Ga0466963_0119507 3300044694 Bacteria 1813
97 Ga0466963_0157109 3300044694 Bacteria 1581
98 Ga0466971_0002125 3300044719 Bacteria 8396
99 Ga0466968_0031154 3300044735 Bacteria 2212
100 Ga0466970_0012543 3300044765 Bacteria 4337
101 Ga0466957_0086583 3300044842 Bacteria 1958
102 Ga0466960_0015273 3300044901 Bacteria 3307
103 Ga0466960_0049530 3300044901 Bacteria 2022
104 Ga0466960_0068731 3300044901 Bacteria 1758
105 Ga0466959_0009910 3300045049 Bacteria 6791
106 Ga0466959_0017350 3300045049 Bacteria 5276
107 Ga0466959_0085395 3300045049 Bacteria 2271
108 Ga0466958_0068874 3300045836 Bacteria 2164
109 Ga0466967_0002861 3300045976 Bacteria 10964
110 Ga0466967_0003196 3300045976 Bacteria 10574
111 Ga0466967_0023647 3300045976 Bacteria 5040
112 Ga0466967_0060231 3300045976 Bacteria 3363
113 Ga0466967_0064732 3300045976 Bacteria 3252
114 Ga0466967_0093907 3300045976 Bacteria 2731
115 Ga0495621_0014997 3300046539 Bacteria 2464
116 Ga0496102_0005240 3300048905 Bacteria 11007
117 Ga0496106_0071736 3300048909 Bacteria 2647
118 Ga0496112_0024329 3300048915 Bacteria 5797
119 Ga0496117_0001576 3300048920 Bacteria 32370
120 Ga0496119_0000287 3300048922 Bacteria 70711
121 Ga0496120_0008601 3300048923 Bacteria 7376
122 Ga0496121_0031692 3300048924 Bacteria 4824
123 Ga0496122_0009586 3300048925 Bacteria 10149
124 Ga0496126_0000072 3300048929 Bacteria 238130
125 Ga0501032_0028006 3300049569 Bacteria 3872
126 Ga0501033_0071673 3300049570 Bacteria 2545
127 Ga0501034_0001103 3300049571 Bacteria 37976
128 Ga0501034_0096940 3300049571 Bacteria 2945
129 Ga0501036_0301526 3300049572 Bacteria 1340
130 Ga0501037_0060974 3300049573 Bacteria 2751
131 Ga0501038_0050647 3300049574 Bacteria 3587
132 Ga0501043_0035561 3300049579 Bacteria 3918
133 Ga0501047_0016460 3300049581 Bacteria 7059
134 Ga0501048_0000993 3300049582 Bacteria 21113
135 Ga0501068_0012836 3300049584 Bacteria 4757
136 Ga0501069_0000010 3300049585 Bacteria 154317
137 Ga0501070_0000005 3300049586 Bacteria 250033
138 Ga0501070_0023557 3300049586 Bacteria 5158
139 Ga0501070_0079604 3300049586 Bacteria 2712
140 Ga0501071_0004202 3300049587 Bacteria 9117
141 Ga0501072_0000952 3300049588 Bacteria 21329
142 Ga0501074_0000789 3300049590 Bacteria 20037
143 Ga0501080_0012082 3300049742 Bacteria 7909
144 Ga0501080_0049869 3300049742 Bacteria 3896
145 Ga0501083_0048821 3300049744 Bacteria 2856
146 Ga0501035_0004523 3300049822 Bacteria 13199
147 Ga0501044_0096767 3300049823 Bacteria 2973
148 nmdc:mga08y16_208431_c1 3300050511 Bacteria 2024
149 nmdc:mga0rr50_115631_c1 3300050513 Bacteria 2129
150 nmdc:mga08x19_127406_c1 3300050514 Bacteria 1710
151 nmdc:mga0a205_29775_c1 3300050515 Bacteria 5225
152 Ga0500559_0009746 3300053136 Bacteria 4146
153 Ga0500616_0000078 3300053153 Bacteria 202009
154 Ga0500645_043703 3300053730 Bacteria 1319
155 Ga0466962_0002760 3300061719 Bacteria 8341
156 Ga0466962_0039812 3300061719 Bacteria 2250
157 2559429817 2558860280 Bacteria 11429938
158 2583153310 2582580736 Bacteria 5325865
159 2586062802 2585427649 Bacteria 9053857
160 2753070905 2751185734 Bacteria 8863695
161 2791916090 2791354901 Bacteria 8322202
162 2795783336 2795385470 Bacteria 8317180
163 2795795936 2795385472 Bacteria 6627535
164 2809588019 2808606522 Bacteria 9488490
165 2844854787 2844852863 Bacteria 3849151
166 2866615347 2866612099 Bacteria 7543886
167 2870726517 2870721527 Bacteria 9689237
168 2899373189 2899370129 Bacteria 6781179
169 2915768601 2915768154 Bacteria 8424322
170 2917744743 2917736166 Bacteria 9690793
171 8003315989 8003314358 Bacteria 10575343
172 8056038943 8056037122 Bacteria 3854319
173 8057347876 8057345674 Bacteria 4160394
174 Ga0466963_0080299
175 JGI24737J22298_10009912
176 Ga0070658_10001535
177 Ga0070687_100019844
178 Ga0070668_100003128
179 Ga0070674_100129961
180 Ga0070674_100157075
181 Ga0070714_100002272
182 Ga0070714_100105613
183 Ga0070713_100159526
184 Ga0070711_100017574
185 Ga0070694_100023398
186 Ga0070678_100019227
187 Ga0070662_100019225
188 Ga0070672_100147159
189 Ga0070686_100037121
190 Ga0070695_100063559
191 Ga0070696_100038223
192 Ga0070693_100041442
193 Ga0070665_100118583
194 Ga0068855_100009670
195 Ga0068855_100084803
196 Ga0068856_100111097
197 Ga0068852_100060827
198 Ga0068852_100087504
199 Ga0068859_100073457
200 Ga0068864_100039996
201 Ga0068866_10014843
202 Ga0068860_100027534
203 Ga0068862_100042570
204 Ga0081455_10000025
205 Ga0081540_1001746
206 Ga0070717_10014036
207 Ga0070712_100085244
208 Ga0068865_100043022
209 Ga0097620_100073455
210 Ga0075435_100098838
211 Ga0105240_10165937
212 Ga0111539_10169256
213 Ga0105245_10007214
214 Ga0105241_10049106
215 Ga0105239_10052747
216 Ga0105246_10179811
217 Ga0157369_10109961
218 Ga0157378_10139670
219 Ga0206353_10308023
220 Ga0213875_10004850
221 Ga0207692_10000029
222 Ga0207642_10006985
223 Ga0207688_10012814
224 Ga0207705_10003499
225 Ga0207671_10043095
226 Ga0207693_10001320
227 Ga0207687_10087393
228 Ga0207687_10090073
229 Ga0207664_10004314
230 Ga0207706_10005345
231 Ga0207686_10086147
232 Ga0207669_10096154
233 Ga0207704_10095941
234 Ga0207711_10001595
235 Ga0207711_10101392
236 Ga0207667_10018413
237 Ga0207667_10127714
238 Ga0207667_10130413
239 Ga0207667_10140693
240 Ga0207678_10007117
241 Ga0207683_10000917
242 Ga0207683_10135899
243 Ga0268264_10080872
244 Ga0307512_10027619
245 Ga0307413_10101121
246 Ga0307518_10000373
247 Ga0307507_10008642
248 Ga0307510_10089244
249 Ga0373956_0000823
250 Ga0436364_1230354
251 Ga0466969_0005118
252 Ga0466969_0109112
253 Ga0466972_0003947
254 Ga0466972_0019475
255 Ga0466965_0005554
256 Ga0466965_0015393
257 Ga0466966_0003006
258 Ga0466966_0030150
259 Ga0466966_0035948
260 Ga0466966_0044083
261 Ga0466966_0090933
262 Ga0466961_0003647
263 Ga0466961_0003807
264 Ga0466961_0056445
265 Ga0466961_0065134
266 Ga0466961_0086343
267 Ga0466963_0002403
268 Ga0466963_0005883
269 Ga0466963_0119507
270 Ga0466963_0157109
271 Ga0466971_0002125
272 Ga0466968_0031154
273 Ga0466970_0012543
274 Ga0466957_0086583
275 Ga0466960_0015273
276 Ga0466960_0049530
277 Ga0466960_0068731
278 Ga0466959_0009910
279 Ga0466959_0017350
280 Ga0466959_0085395
281 Ga0466958_0068874
282 Ga0466967_0002861
283 Ga0466967_0003196
284 Ga0466967_0023647
285 Ga0466967_0060231
286 Ga0466967_0064732
287 Ga0466967_0093907
288 Ga0495621_0014997
289 Ga0496102_0005240
290 Ga0496106_0071736
291 Ga0496112_0024329
292 Ga0496117_0001576
293 Ga0496119_0000287
294 Ga0496120_0008601
295 Ga0496121_0031692
296 Ga0496122_0009586
297 Ga0496126_0000072
298 Ga0501032_0028006
299 Ga0501033_0071673
300 Ga0501034_0001103
301 Ga0501034_0096940
302 Ga0501036_0301526
303 Ga0501037_0060974
304 Ga0501038_0050647
305 Ga0501043_0035561
306 Ga0501047_0016460
307 Ga0501048_0000993
308 Ga0501068_0012836
309 Ga0501069_0000010
310 Ga0501070_0000005
311 Ga0501070_0023557
312 Ga0501070_0079604
313 Ga0501071_0004202
314 Ga0501072_0000952
315 Ga0501074_0000789
316 Ga0501080_0012082
317 Ga0501080_0049869
318 Ga0501083_0048821
319 Ga0501035_0004523
320 Ga0501044_0096767
321 nmdc:mga08y16_208431_c1
322 nmdc:mga0rr50_115631_c1
323 nmdc:mga08x19_127406_c1
324 nmdc:mga0a205_29775_c1
325 Ga0500559_0009746
326 Ga0500616_0000078
327 Ga0500645_043703
328 Ga0466962_0002760
329 Ga0466962_0039812
330 2559429817
331 2583153310
332 2586062802
333 2753070905
334 2791916090
335 2795783336
336 2795795936
337 2809588019
338 2844854787
339 2866615347
340 2870726517
341 2899373189
342 2915768601
343 2917744743
344 8003315989
345 8056038943
346 8057347876

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00817

IMS

impB/mucB/samB family

30

175

0.99

PF21999

IMS_HHH_1

DNA polymerase-iota, thumb domain

200

252

0.97

PF11798

IMS_HHH

IMS family HHH motif

188

218

0.95

PF11799

IMS_C

impB/mucB/samB family C-terminal domain

262

374

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1im4-assembly1.cif.gz_A crystal structure of a dinb homolog (dbh) lesion bypass dna polymerase catalytic fragment from sulfolobus solfataricus 0.9311 23 216
4dez-assembly1.cif.gz_A structure of msdpo4 0.9247 23 253
4r8u-assembly2.cif.gz_B s-sad structure of dinb-dna complex 0.9062 23 356
4dez-assembly1.cif.gz_A structure of msdpo4 0.9056 23 253
4f4x-assembly1.cif.gz_A y-family dna polymerase chimera dbh-dpo4-dpo4 #2 0.9013 23 359
ID Description Score Start End Superfamily
af_Q2FWZ5_4_63_3.40.1170.60 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.993 32 87 3.40.1170.60
af_O74944_370_477_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9751 258 364 3.30.1490.100
af_P34409_148_297_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.9693 89 181 3.30.70.270
af_A0A0R0LFA9_330_427_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9678 256 340 3.30.1490.100
af_P9WNT1_245_346_3.30.1490.100 Alpha Beta;2-Layer Sandwich;Dna Ligase; domain 1;DNA polymerase, Y-family, little finger domain 0.9611 256 356 3.30.1490.100
ID Description Score Start End GO Terms
AF-A0A6B2XPQ8-F1-model_v4 DNA polymerase IV 0.9836 45 189 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A7Y1U053-F1-model_v4 DNA polymerase IV (EC 2.7.7.7) 0.9761 21 169 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A353N617-F1-model_v4 DNA polymerase IV 0.976 32 218 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A7Y2IVV0-F1-model_v4 DNA polymerase IV (EC 2.7.7.7) 0.9759 27 92 GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A528ILL2-F1-model_v4 DNA polymerase IV 0.975 21 203 GO:0003887
GO:0005829
GO:0009432
GO:0042276

Map