F263135

General Info

Members Datasets Scaffolds Average Seq Length
173 54 346 298

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0000056|Ga0453684_0000056_491732_492715
Length 327
Sequence MTPEESGEPTSEQGTPTPSNQNVFNQGDPNWWSGGKKLASGEEFNPRKLDTPLDKMMRSYAGRRSVTHTERKRGRYIQSRPANGRVDDLAFDATLRAAAPYQNERGEIKERDKVAFSIRPADYMKKIRVRRAANLILFLVDASWSMAVAERMAATKGAIMSLLTDAYQRRDRVGLIVFQKSKATLVLPPTNSVLLAQEALSDVPVGGKTPLSAGLMMAYEVLRKEKILHPDVMPLLIVLTDGAGNVAVGHLPPQEEAHNIAEMIAREKIHSVVINMEHAAFDQGLAQSLADHLESPCYTITDLKAESLFVTVQKEIRQVNSSAMDFK

Samples

Sample ID Description Type Environment
1 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
6 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
7 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
8 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
10 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
11 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
12 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
13 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
15 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
21 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
22 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
23 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
24 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
25 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
26 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
27 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
28 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
29 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
30 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
31 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
32 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
33 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
34 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
35 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
36 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
37 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
38 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
39 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
40 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
41 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
42 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
43 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
44 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
45 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
46 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
47 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
48 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
49 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
50 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
51 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
52 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
53 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
54 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.42
Stem 0
Stem Tuber 0
Unclassified 13.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0453684_0000056 3300044712 Bacteria 513389
2 SwRhRL2b_contig_141197 2162886007 Bacteria 1170
3 SwRhRL2b_contig_1641965 2162886007 Bacteria 1120
4 Ga0065707_10002683 3300005295 Bacteria 4673
5 Ga0065707_10085610 3300005295 Bacteria 6022
6 Ga0070689_100209750 3300005340 Unclassified 1594
7 Ga0070698_100095307 3300005471 Unclassified 2954
8 Ga0070698_100424355 3300005471 Bacteria 1264
9 Ga0070699_100014050 3300005518 Bacteria 6888
10 Ga0068862_100050090 3300005844 Bacteria 3568
11 Ga0081539_10013185 3300005985 Bacteria 6256
12 Ga0075428_100036594 3300006844 Bacteria 5405
13 Ga0075428_100169098 3300006844 Unclassified 2371
14 Ga0075431_100014185 3300006847 Bacteria 8059
15 Ga0075429_100031927 3300006880 Bacteria 4578
16 Ga0075429_100037052 3300006880 Bacteria 4245
17 Ga0105240_10193279 3300009093 Bacteria 2391
18 Ga0114129_10002131 3300009147 Bacteria 27286
19 Ga0114129_10022693 3300009147 Bacteria 8901
20 Ga0114129_10030968 3300009147 Bacteria 7565
21 Ga0114129_10054557 3300009147 Bacteria 5603
22 Ga0114129_10083527 3300009147 Bacteria 4436
23 Ga0114129_10192225 3300009147 Bacteria 2771
24 Ga0114129_10452547 3300009147 Unclassified 1683
25 Ga0163163_10357176 3300014325 Bacteria 1517
26 Ga0207684_10375426 3300025910 Bacteria 1223
27 Ga0207662_10091225 3300025918 Unclassified 1874
28 Ga0207709_10079295 3300025935 Archaea 2111
29 Ga0207670_10042409 3300025936 Bacteria 2998
30 Ga0207670_10091115 3300025936 Bacteria 2155
31 Ga0207675_100496107 3300026118 Bacteria 1215
32 Ga0265323_10055125 3300028653 Bacteria 1399
33 Ga0265340_10024917 3300031247 Unclassified 3034
34 Ga0265331_10014567 3300031250 Bacteria 4180
35 Ga0265331_10103622 3300031250 Bacteria 1308
36 Ga0265327_10047735 3300031251 Bacteria 2256
37 Ga0316575_10010078 3300031665 Bacteria 3466
38 Ga0316575_10040141 3300031665 Bacteria 1849
39 Ga0316579_10016287 3300031691 Bacteria 3245
40 Ga0316579_10026641 3300031691 Bacteria 2619
41 Ga0316579_10070238 3300031691 Bacteria 1658
42 Ga0316576_10000912 3300031727 Bacteria 15068
43 Ga0316576_10011408 3300031727 Bacteria 5825
44 Ga0316576_10043433 3300031727 Bacteria 3243
45 Ga0316576_10119720 3300031727 Bacteria 1976
46 Ga0316576_10134475 3300031727 Unclassified 1861
47 Ga0316576_10148615 3300031727 Bacteria 1766
48 Ga0316578_10003597 3300031728 Bacteria 7132
49 Ga0316578_10033483 3300031728 Bacteria 2944
50 Ga0316578_10075567 3300031728 Bacteria 1999
51 Ga0316578_10168409 3300031728 Bacteria 1320
52 Ga0307405_10276340 3300031731 Unclassified 1262
53 Ga0316577_10001353 3300031733 Bacteria 11513
54 Ga0316577_10006465 3300031733 Bacteria 6191
55 Ga0316577_10010242 3300031733 Bacteria 5056
56 Ga0316577_10035162 3300031733 Bacteria 2800
57 Ga0316577_10036127 3300031733 Unclassified 2762
58 Ga0316577_10042682 3300031733 Bacteria 2537
59 Ga0316577_10088098 3300031733 Unclassified 1737
60 Ga0316577_10127718 3300031733 Unclassified 1430
61 Ga0307407_10068918 3300031903 Bacteria 2097
62 Ga0307412_10096904 3300031911 Bacteria 2077
63 Ga0316583_10053295 3300032133 Unclassified 1423
64 Ga0316585_10034577 3300032137 Bacteria 1598
65 Ga0316574_0000214 3300035398 Bacteria 20485
66 Ga0316574_0007429 3300035398 Bacteria 6007
67 Ga0316574_0240712 3300035398 Bacteria 1157
68 Ga0316582_0000213 3300036647 Bacteria 18807
69 Ga0316582_0013790 3300036647 Bacteria 4561
70 Ga0316582_0016352 3300036647 Bacteria 4265
71 Ga0316582_0017198 3300036647 Unclassified 4178
72 Ga0316582_0019778 3300036647 Bacteria 3947
73 Ga0316582_0048571 3300036647 Bacteria 2683
74 Ga0316582_0078577 3300036647 Bacteria 2150
75 Ga0316582_0156525 3300036647 Bacteria 1542
76 Ga0316582_0205875 3300036647 Bacteria 1343
77 Ga0316584_0001181 3300036712 Bacteria 15427
78 Ga0316584_0003533 3300036712 Bacteria 10194
79 Ga0316584_0010845 3300036712 Bacteria 6382
80 Ga0316584_0012329 3300036712 Bacteria 6027
81 Ga0316584_0028558 3300036712 Bacteria 4115
82 Ga0316584_0032035 3300036712 Bacteria 3889
83 Ga0316584_0059331 3300036712 Bacteria 2865
84 Ga0316584_0122907 3300036712 Bacteria 1939
85 Ga0316584_0202227 3300036712 Bacteria 1465
86 Ga0316584_0250712 3300036712 Unclassified 1293
87 Ga0316581_0003174 3300037588 Bacteria 4059
88 Ga0316581_0009069 3300037588 Bacteria 2726
89 Ga0316581_0010960 3300037588 Bacteria 2525
90 Ga0316581_0053478 3300037588 Bacteria 1238
91 Ga0400489_05563 3300039093 Bacteria 1188
92 Ga0451577_0006742 3300042876 Bacteria 11393
93 Ga0451577_0025650 3300042876 Bacteria 5347
94 Ga0451577_0027373 3300042876 Bacteria 5160
95 Ga0451577_0031927 3300042876 Bacteria 4748
96 Ga0451577_0110218 3300042876 Bacteria 2462
97 Ga0451577_0111739 3300042876 Bacteria 2445
98 Ga0451577_0145186 3300042876 Bacteria 2133
99 Ga0451577_0247103 3300042876 Bacteria 1615
100 Ga0453683_0000733 3300044673 Bacteria 33588
101 Ga0453683_0008369 3300044673 Bacteria 6945
102 Ga0453683_0011617 3300044673 Bacteria 5800
103 Ga0453683_0013577 3300044673 Bacteria 5311
104 Ga0453684_0000003 3300044712 Bacteria 1481694
105 Ga0453684_0000171 3300044712 Bacteria 286600
106 Ga0453684_0000344 3300044712 Bacteria 192860
107 Ga0453684_0000581 3300044712 Bacteria 136088
108 Ga0453684_0002233 3300044712 Bacteria 48026
109 Ga0453684_0003066 3300044712 Bacteria 38706
110 Ga0453684_0003782 3300044712 Bacteria 33412
111 Ga0453684_0004903 3300044712 Bacteria 27390
112 Ga0453684_0009425 3300044712 Bacteria 17076
113 Ga0453684_0012130 3300044712 Bacteria 14302
114 Ga0453684_0013215 3300044712 Bacteria 13458
115 Ga0453684_0017156 3300044712 Bacteria 11246
116 Ga0453684_0020919 3300044712 Bacteria 9818
117 Ga0453684_0025844 3300044712 Bacteria 8509
118 Ga0453684_0032062 3300044712 Bacteria 7367
119 Ga0453684_0035809 3300044712 Bacteria 6852
120 Ga0453684_0047551 3300044712 Bacteria 5687
121 Ga0453684_0049744 3300044712 Bacteria 5522
122 Ga0453684_0053747 3300044712 Bacteria 5254
123 Ga0453684_0056863 3300044712 Bacteria 5070
124 Ga0453684_0064232 3300044712 Bacteria 4690
125 Ga0453684_0068957 3300044712 Bacteria 4487
126 Ga0453684_0099491 3300044712 Bacteria 3562
127 Ga0453684_0107720 3300044712 Archaea 3392
128 Ga0453684_0133391 3300044712 Unclassified 2977
129 Ga0453684_0137156 3300044712 Bacteria 2927
130 Ga0453684_0156735 3300044712 Bacteria 2699
131 Ga0453684_0184160 3300044712 Bacteria 2449
132 Ga0453684_0218778 3300044712 Bacteria 2208
133 Ga0453684_0221191 3300044712 Bacteria 2193
134 Ga0453684_0224919 3300044712 Bacteria 2171
135 Ga0453684_0308882 3300044712 Bacteria 1795
136 Ga0453684_0313208 3300044712 Unclassified 1780
137 Ga0453684_0380328 3300044712 Unclassified 1585
138 Ga0453684_0420250 3300044712 Unclassified 1493
139 Ga0453684_0449917 3300044712 Bacteria 1434
140 Ga0453684_0509317 3300044712 Bacteria 1331
141 Ga0453684_0520729 3300044712 Bacteria 1314
142 Ga0453684_0601373 3300044712 Bacteria 1205
143 Ga0453684_0636894 3300044712 Bacteria 1165
144 Ga0451576_0000164 3300045051 Bacteria 168460
145 Ga0451576_0014382 3300045051 Bacteria 8811
146 Ga0451576_0042268 3300045051 Archaea 4812
147 Ga0451576_0097405 3300045051 Archaea 3059
148 Ga0451576_0160878 3300045051 Bacteria 2343
149 Ga0451576_0169641 3300045051 Bacteria 2278
150 Ga0501038_0342402 3300049574 Bacteria 1166
151 Ga0501039_0490078 3300049575 Unclassified 965
152 Ga0501073_0004896 3300049589 Bacteria 10051
153 Ga0501073_0105621 3300049589 Bacteria 1954
154 Ga0501073_0180159 3300049589 Bacteria 1462
155 Ga0501075_0099367 3300049591 Bacteria 2210
156 Ga0501076_0050578 3300049592 Bacteria 3288
157 Ga0501079_0023961 3300049741 Bacteria 4682
158 Ga0501080_0000862 3300049742 Bacteria 24859
159 Ga0501081_0095592 3300049743 Bacteria 2095
160 nmdc:mga05p37_212642_c1 3300050507 Unclassified 2337
161 nmdc:mga05p37_450_c1 3300050507 Bacteria 44688
162 nmdc:mga05p37_66439_c1 3300050507 Bacteria 4436
163 nmdc:mga05p37_72183_c1 3300050507 Unclassified 4247
164 nmdc:mga05p37_95220_c1 3300050507 Unclassified 3668
165 nmdc:mga09592_198949_c1 3300050508 Bacteria 1735
166 nmdc:mga09592_452127_c1 3300050508 Unclassified 1108
167 nmdc:mga09592_77227_c1 3300050508 Bacteria 2833
168 nmdc:mga09592_832_c1 3300050508 Bacteria 23935
169 nmdc:mga0qj67_15542_c1 3300050509 Bacteria 5763
170 nmdc:mga06r32_3258_c1 3300050510 Bacteria 14526
171 nmdc:mga06r32_463740_c1 3300050510 Bacteria 1246
172 Ga0501084_0000328 3300054114 Bacteria 36335
173 Ga0501084_0066820 3300054114 Bacteria 3009
174 Ga0453684_0000056
175 SwRhRL2b_contig_141197
176 SwRhRL2b_contig_1641965
177 Ga0065707_10002683
178 Ga0065707_10085610
179 Ga0070689_100209750
180 Ga0070698_100095307
181 Ga0070698_100424355
182 Ga0070699_100014050
183 Ga0068862_100050090
184 Ga0081539_10013185
185 Ga0075428_100036594
186 Ga0075428_100169098
187 Ga0075431_100014185
188 Ga0075429_100031927
189 Ga0075429_100037052
190 Ga0105240_10193279
191 Ga0114129_10002131
192 Ga0114129_10022693
193 Ga0114129_10030968
194 Ga0114129_10054557
195 Ga0114129_10083527
196 Ga0114129_10192225
197 Ga0114129_10452547
198 Ga0163163_10357176
199 Ga0207684_10375426
200 Ga0207662_10091225
201 Ga0207709_10079295
202 Ga0207670_10042409
203 Ga0207670_10091115
204 Ga0207675_100496107
205 Ga0265323_10055125
206 Ga0265340_10024917
207 Ga0265331_10014567
208 Ga0265331_10103622
209 Ga0265327_10047735
210 Ga0316575_10010078
211 Ga0316575_10040141
212 Ga0316579_10016287
213 Ga0316579_10026641
214 Ga0316579_10070238
215 Ga0316576_10000912
216 Ga0316576_10011408
217 Ga0316576_10043433
218 Ga0316576_10119720
219 Ga0316576_10134475
220 Ga0316576_10148615
221 Ga0316578_10003597
222 Ga0316578_10033483
223 Ga0316578_10075567
224 Ga0316578_10168409
225 Ga0307405_10276340
226 Ga0316577_10001353
227 Ga0316577_10006465
228 Ga0316577_10010242
229 Ga0316577_10035162
230 Ga0316577_10036127
231 Ga0316577_10042682
232 Ga0316577_10088098
233 Ga0316577_10127718
234 Ga0307407_10068918
235 Ga0307412_10096904
236 Ga0316583_10053295
237 Ga0316585_10034577
238 Ga0316574_0000214
239 Ga0316574_0007429
240 Ga0316574_0240712
241 Ga0316582_0000213
242 Ga0316582_0013790
243 Ga0316582_0016352
244 Ga0316582_0017198
245 Ga0316582_0019778
246 Ga0316582_0048571
247 Ga0316582_0078577
248 Ga0316582_0156525
249 Ga0316582_0205875
250 Ga0316584_0001181
251 Ga0316584_0003533
252 Ga0316584_0010845
253 Ga0316584_0012329
254 Ga0316584_0028558
255 Ga0316584_0032035
256 Ga0316584_0059331
257 Ga0316584_0122907
258 Ga0316584_0202227
259 Ga0316584_0250712
260 Ga0316581_0003174
261 Ga0316581_0009069
262 Ga0316581_0010960
263 Ga0316581_0053478
264 Ga0400489_05563
265 Ga0451577_0006742
266 Ga0451577_0025650
267 Ga0451577_0027373
268 Ga0451577_0031927
269 Ga0451577_0110218
270 Ga0451577_0111739
271 Ga0451577_0145186
272 Ga0451577_0247103
273 Ga0453683_0000733
274 Ga0453683_0008369
275 Ga0453683_0011617
276 Ga0453683_0013577
277 Ga0453684_0000003
278 Ga0453684_0000171
279 Ga0453684_0000344
280 Ga0453684_0000581
281 Ga0453684_0002233
282 Ga0453684_0003066
283 Ga0453684_0003782
284 Ga0453684_0004903
285 Ga0453684_0009425
286 Ga0453684_0012130
287 Ga0453684_0013215
288 Ga0453684_0017156
289 Ga0453684_0020919
290 Ga0453684_0025844
291 Ga0453684_0032062
292 Ga0453684_0035809
293 Ga0453684_0047551
294 Ga0453684_0049744
295 Ga0453684_0053747
296 Ga0453684_0056863
297 Ga0453684_0064232
298 Ga0453684_0068957
299 Ga0453684_0099491
300 Ga0453684_0107720
301 Ga0453684_0133391
302 Ga0453684_0137156
303 Ga0453684_0156735
304 Ga0453684_0184160
305 Ga0453684_0218778
306 Ga0453684_0221191
307 Ga0453684_0224919
308 Ga0453684_0308882
309 Ga0453684_0313208
310 Ga0453684_0380328
311 Ga0453684_0420250
312 Ga0453684_0449917
313 Ga0453684_0509317
314 Ga0453684_0520729
315 Ga0453684_0601373
316 Ga0453684_0636894
317 Ga0451576_0000164
318 Ga0451576_0014382
319 Ga0451576_0042268
320 Ga0451576_0097405
321 Ga0451576_0160878
322 Ga0451576_0169641
323 Ga0501038_0342402
324 Ga0501039_0490078
325 Ga0501073_0004896
326 Ga0501073_0105621
327 Ga0501073_0180159
328 Ga0501075_0099367
329 Ga0501076_0050578
330 Ga0501079_0023961
331 Ga0501080_0000862
332 Ga0501081_0095592
333 nmdc:mga05p37_212642_c1
334 nmdc:mga05p37_450_c1
335 nmdc:mga05p37_66439_c1
336 nmdc:mga05p37_72183_c1
337 nmdc:mga05p37_95220_c1
338 nmdc:mga09592_198949_c1
339 nmdc:mga09592_452127_c1
340 nmdc:mga09592_77227_c1
341 nmdc:mga09592_832_c1
342 nmdc:mga0qj67_15542_c1
343 nmdc:mga06r32_3258_c1
344 nmdc:mga06r32_463740_c1
345 Ga0501084_0000328
346 Ga0501084_0066820

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13519

VWA_2

von Willebrand factor type A domain

136

243

0.93

PF00092

VWA

von Willebrand factor type A domain

136

314

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
8amz-assembly1.cif.gz_W spinach 19s proteasome 0.7923 112 279
6to1-assembly1.cif.gz_A crystal structure of three n-terminal domains of the type v pili tip protein mfa5 from porphyromonas gingivalis 0.7896 112 224
8ft8-assembly1.cif.gz_A the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone, thr-val linker variant, sumo tag-free preparation 0.7859 109 295
8fzu-assembly2.cif.gz_B the von willebrand factor a domain of human capillary morphogenesis gene ii, flexibly fused to the 1tel crystallization chaperone, thr-val linker variant, expressed with sumo tag 0.7812 111 297
8fz4-assembly2.cif.gz_B the von willebrand factor a domain of anthrax toxin receptor 2 0.7712 109 292
ID Description Score Start End Superfamily
af_P9WPR3_452_616_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8957 117 283 3.40.50.410
af_A0A1D6GEW7_553_745_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8942 117 291 3.40.50.410
af_Q58320_1_171_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8881 129 294 3.40.50.410
af_P9WPR3_452_616_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8856 117 283 3.40.50.410
af_Q58320_1_171_3.40.50.410 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;von Willebrand factor, type A domain 0.8589 129 294 3.40.50.410
ID Description Score Start End GO Terms
AF-A0A2N2M6R7-F1-model_v4 VWFA domain-containing protein 0.9792 142 296
AF-A0A432J5X1-F1-model_v4 VWFA domain-containing protein 0.9706 105 296
AF-A0A2N2M879-F1-model_v4 Magnesium chelatase 0.9623 176 296
AF-A0A3A0A699-F1-model_v4 Magnesium chelatase 0.9609 164 296
AF-A0A370AQP3-F1-model_v4 VWA domain-containing protein 0.9589 107 282

Map