F264765

General Info

Members Datasets Scaffolds Average Seq Length
174 99 174 308

Family's Representative Sequence

Representative Sequence 3300028653|Ga0265323_10000819|Ga0265323_100008192
Length 332
Sequence MSRVLATKRIACLTHLTGYLLNFQVMQIIRAATELKPGNRKVCVAIGVFDGVHLGHQQIIRQTVANARQHDAIALVVTFDRHPSTVVAPDRVPPLIYSLPQKLGAIESLGTDTLLLIHFDRAFSEQTGEAFIRGLARDLGKIQSLCVGADFVFGHKRSGNVALLKKLGDELGFTVHGLAAVSLDNQIVSSTRIREAIRAGNLDAASQMLGRPYAISGRVVAGDGVGRKLGFPTANLDAAGLVLPPNGVYLGIAKIGTKSQPVALNIGFRPTLATGGPQLRVEAHLLDFTGDLYGQELEIEIGEKLRDEQKFGSLEELKAQIARDLAGAKRRF

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
14 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
16 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
17 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
18 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
19 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
20 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
21 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
22 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
23 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
32 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
33 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
34 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
35 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
36 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
37 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
38 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
39 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
40 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
41 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
42 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
43 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
44 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
45 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
46 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
47 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
48 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
49 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
50 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
51 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
52 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
53 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
54 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
55 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
56 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
57 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
58 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
59 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
60 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
61 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
62 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
63 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
64 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
65 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
66 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
71 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
72 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
73 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
76 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
77 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
81 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
82 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
83 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
84 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
85 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
86 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
87 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
88 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
89 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
98 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
99 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.57
Nodule 0
Rhizoplane 0.57
Rhizosphere 97.7
Stem 0
Stem Tuber 0
Unclassified 1.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10152303 3300003320 Bacteria 5337
2 rootH1_10190938 3300003323 Bacteria 2590
3 Ga0065704_10091427 3300005289 Bacteria 2718
4 Ga0070658_10052465 3300005327 Bacteria 3308
5 Ga0070690_100001373 3300005330 Bacteria 12670
6 Ga0070705_100074984 3300005440 Unclassified 2058
7 Ga0070686_100006705 3300005544 Bacteria 6409
8 Ga0068855_100011480 3300005563 Bacteria 10705
9 Ga0068857_100177346 3300005577 Bacteria 1939
10 Ga0068856_100000080 3300005614 Bacteria 90679
11 Ga0068859_100429672 3300005617 Bacteria 1417
12 Ga0068859_100721316 3300005617 Bacteria 1087
13 Ga0068864_100079240 3300005618 Bacteria 2876
14 Ga0068858_100039758 3300005842 Bacteria 4360
15 Ga0081455_10152071 3300005937 Unclassified 1783
16 Ga0081540_1008571 3300005983 Bacteria 7130
17 Ga0097620_100019540 3300006931 Bacteria 6807
18 Ga0097620_100429675 3300006931 Bacteria 1417
19 Ga0097620_100721429 3300006931 Bacteria 1087
20 Ga0105240_10053849 3300009093 Bacteria 5047
21 Ga0105240_10611305 3300009093 Bacteria 1199
22 Ga0105242_10073853 3300009176 Bacteria 2836
23 Ga0105248_10441603 3300009177 Bacteria 1466
24 Ga0163162_10169497 3300013306 Bacteria 2308
25 Ga0157376_10433668 3300014969 Unclassified 1278
26 Ga0213872_10038527 3300021361 Bacteria 2182
27 Ga0207705_10068747 3300025909 Unclassified 2565
28 Ga0207695_10182717 3300025913 Bacteria 2017
29 Ga0207663_10002293 3300025916 Bacteria 9163
30 Ga0207667_10011516 3300025949 Bacteria 10276
31 Ga0207703_10042214 3300026035 Unclassified 3658
32 Ga0207702_10123517 3300026078 Unclassified 2320
33 Ga0207676_10331285 3300026095 Bacteria 1401
34 Ga0207674_10119310 3300026116 Bacteria 2607
35 Ga0265337_1000079 3300028556 Bacteria 46207
36 Ga0265337_1001254 3300028556 Bacteria 12787
37 Ga0265337_1001494 3300028556 Bacteria 11469
38 Ga0265337_1053917 3300028556 Unclassified 1126
39 Ga0265326_10005387 3300028558 Bacteria 4033
40 Ga0265319_1000004 3300028563 Bacteria 305085
41 Ga0265319_1011592 3300028563 Bacteria 3600
42 Ga0265319_1043011 3300028563 Bacteria 1518
43 Ga0265323_10000819 3300028653 Bacteria 16659
44 Ga0265323_10010196 3300028653 Bacteria 3813
45 Ga0265322_10056368 3300028654 Unclassified 1115
46 Ga0265336_10003311 3300028666 Bacteria 6342
47 Ga0265336_10011396 3300028666 Bacteria 3025
48 Ga0265336_10019301 3300028666 Bacteria 2201
49 Ga0265338_10000025 3300028800 Bacteria 296972
50 Ga0265338_10000041 3300028800 Bacteria 230676
51 Ga0265338_10000101 3300028800 Bacteria 159323
52 Ga0265338_10000402 3300028800 Bacteria 77555
53 Ga0265338_10000702 3300028800 Bacteria 57422
54 Ga0265338_10002357 3300028800 Bacteria 28502
55 Ga0265338_10003775 3300028800 Bacteria 21045
56 Ga0265338_10004211 3300028800 Bacteria 19610
57 Ga0265338_10006441 3300028800 Bacteria 14965
58 Ga0265338_10007563 3300028800 Bacteria 13434
59 Ga0265338_10012284 3300028800 Bacteria 9777
60 Ga0265338_10018315 3300028800 Bacteria 7501
61 Ga0265338_10068249 3300028800 Bacteria 3065
62 Ga0265338_10074523 3300028800 Bacteria 2886
63 Ga0265338_10077908 3300028800 Unclassified 2798
64 Ga0265338_10079371 3300028800 Bacteria 2762
65 Ga0265338_10112026 3300028800 Unclassified 2195
66 Ga0265338_10113363 3300028800 Unclassified 2178
67 Ga0265324_10000586 3300029957 Bacteria 24901
68 Ga0265324_10000919 3300029957 Bacteria 18523
69 Ga0265324_10038994 3300029957 Unclassified 1647
70 Ga0265324_10049518 3300029957 Bacteria 1445
71 Ga0265324_10070233 3300029957 Bacteria 1193
72 Ga0265320_10002390 3300031240 Bacteria 13097
73 Ga0265320_10005430 3300031240 Bacteria 8188
74 Ga0265320_10007756 3300031240 Bacteria 6631
75 Ga0265320_10020118 3300031240 Bacteria 3628
76 Ga0265325_10037072 3300031241 Unclassified 2578
77 Ga0265340_10005112 3300031247 Bacteria 7292
78 Ga0265340_10060732 3300031247 Bacteria 1810
79 Ga0265339_10007534 3300031249 Bacteria 7017
80 Ga0265339_10042329 3300031249 Unclassified 2522
81 Ga0265339_10109439 3300031249 Bacteria 1431
82 Ga0265327_10001083 3300031251 Bacteria 37930
83 Ga0265327_10025526 3300031251 Unclassified 3443
84 Ga0265327_10126010 3300031251 Bacteria 1209
85 Ga0265316_10004016 3300031344 Bacteria 14738
86 Ga0265316_10014775 3300031344 Bacteria 6854
87 Ga0265316_10060552 3300031344 Bacteria 2942
88 Ga0265316_10130850 3300031344 Unclassified 1890
89 Ga0265316_10198038 3300031344 Bacteria 1490
90 Ga0265313_10001779 3300031595 Bacteria 19693
91 Ga0265313_10008477 3300031595 Bacteria 6817
92 Ga0265314_10111600 3300031711 Bacteria 1737
93 Ga0265314_10122097 3300031711 Bacteria 1638
94 Ga0265342_10050610 3300031712 Unclassified 2481
95 Ga0265342_10139570 3300031712 Bacteria 1353
96 Ga0316576_10260554 3300031727 Bacteria 1301
97 Ga0373930_0000039 3300034816 Bacteria 11600
98 Ga0373926_0050993 3300035083 Bacteria 1492
99 Ga0373944_0000379 3300035089 Bacteria 10040
100 Ga0373951_0003537 3300035091 Bacteria 3777
101 Ga0373932_0000001 3300035112 Bacteria 1459067
102 Ga0373945_0003398 3300035116 Bacteria 5004
103 Ga0373954_0004641 3300035118 Bacteria 5926
104 Ga0373954_0046908 3300035118 Bacteria 2020
105 Ga0373943_0018028 3300035170 Bacteria 3239
106 Ga0373931_0000002 3300035691 Bacteria 599830
107 Ga0373935_0017144 3300035692 Bacteria 4389
108 Ga0373927_0019301 3300035695 Bacteria 4471
109 Ga0373933_0072736 3300035724 Unclassified 2094
110 Ga0373947_0018451 3300035725 Bacteria 4015
111 Ga0373947_0044250 3300035725 Bacteria 2660
112 Ga0373937_0001417 3300036401 Bacteria 20032
113 Ga0373937_0055842 3300036401 Bacteria 3626
114 Ga0316584_0377248 3300036712 Bacteria 1014
115 Ga0373925_0000077 3300037068 Bacteria 105383
116 Ga0373925_0045022 3300037068 Bacteria 3277
117 Ga0395901_0147149 3300038443 Unclassified 2476
118 Ga0436361_0617449 3300039447 Bacteria 3255
119 Ga0451577_0018632 3300042876 Bacteria 6393
120 Ga0453684_0000596 3300044712 Bacteria 134106
121 Ga0453684_0007471 3300044712 Bacteria 20067
122 Ga0453684_0088470 3300044712 Bacteria 3835
123 Ga0453684_0128270 3300044712 Unclassified 3049
124 Ga0453684_0199312 3300044712 Bacteria 2335
125 Ga0453684_0403721 3300044712 Bacteria 1530
126 Ga0451576_0032283 3300045051 Bacteria 5579
127 Ga0451576_0090988 3300045051 Bacteria 3174
128 Ga0451576_0242540 3300045051 Bacteria 1883
129 Ga0451576_0280406 3300045051 Bacteria 1742
130 Ga0451576_0344582 3300045051 Bacteria 1560
131 Ga0451576_0690592 3300045051 Bacteria 1072
132 Ga0495629_0022389 3300046459 Bacteria 4507
133 Ga0495629_0255849 3300046459 Unclassified 1204
134 Ga0495651_0149159 3300046462 Unclassified 1688
135 Ga0495651_0324250 3300046462 Unclassified 1026
136 Ga0495582_0005660 3300046473 Bacteria 6956
137 Ga0495618_0013771 3300046514 Bacteria 4920
138 Ga0495618_0025222 3300046514 Unclassified 3689
139 Ga0495628_0226637 3300046516 Bacteria 1402
140 Ga0495630_0000210 3300046517 Bacteria 46241
141 Ga0495630_0007064 3300046517 Bacteria 7998
142 Ga0495630_0037051 3300046517 Bacteria 3646
143 Ga0495666_0001836 3300046526 Bacteria 10493
144 Ga0495586_0000094 3300046535 Bacteria 54446
145 Ga0495586_0004817 3300046535 Bacteria 7213
146 Ga0495667_0020888 3300046559 Unclassified 4419
147 Ga0495634_0002157 3300046642 Bacteria 16556
148 Ga0495635_0009487 3300046663 Bacteria 6801
149 Ga0495647_0126939 3300046681 Unclassified 1077
150 Ga0495613_0002455 3300046689 Bacteria 13977
151 Ga0495613_0102226 3300046689 Bacteria 2069
152 Ga0495624_0147309 3300046690 Unclassified 1440
153 Ga0495674_0002905 3300047319 Bacteria 16677
154 Ga0495676_0013661 3300047321 Bacteria 7287
155 Ga0495676_0105552 3300047321 Bacteria 2077
156 Ga0495680_0034532 3300047322 Unclassified 4082
157 Ga0495686_0245647 3300047472 Bacteria 1007
158 Ga0496106_0142045 3300048909 Bacteria 1889
159 Ga0501031_0000391 3300049568 Bacteria 25675
160 Ga0501032_0006975 3300049569 Bacteria 8281
161 Ga0501032_0015439 3300049569 Bacteria 5390
162 Ga0501033_0004045 3300049570 Bacteria 11843
163 Ga0501033_0007002 3300049570 Bacteria 8802
164 Ga0501034_0109372 3300049571 Bacteria 2755
165 Ga0501043_0053536 3300049579 Bacteria 3169
166 Ga0501047_0150906 3300049581 Bacteria 2200
167 Ga0501047_0279800 3300049581 Unclassified 1513
168 Ga0501035_0002983 3300049822 Bacteria 16264
169 Ga0501044_0000741 3300049823 Bacteria 39342
170 Ga0501044_0006067 3300049823 Bacteria 13330
171 Ga0501044_0224714 3300049823 Bacteria 1827
172 nmdc:mga09592_254151_c1 3300050508 Bacteria 1523
173 nmdc:mga08x19_173009_c1 3300050514 Bacteria 1471
174 Ga0500650_0022949 3300053098 Bacteria 2767

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005289 Ga0065704_10091427 Ga0065704_100914273 281
2 3300013306 Ga0163162_10169497 Ga0163162_101694972 281
3 3300045051 Ga0451576_0690592 Ga0451576_0690592_171_1037 285
4 3300031251 Ga0265327_10025526 Ga0265327_100255263 289
5 3300045051 Ga0451576_0090988 Ga0451576_0090988_345_1277 295
6 3300036712 Ga0316584_0377248 Ga0316584_0377248_63_956 297
7 3300005440 Ga0070705_100074984 Ga0070705_1000749841 301
8 3300021361 Ga0213872_10038527 Ga0213872_100385272 305
9 3300039447 Ga0436361_0617449 Ga0436361_0617449_2026_2997 305
10 3300044712 Ga0453684_0088470 Ga0453684_0088470_173_1120 305
11 3300044712 Ga0453684_0403721 Ga0453684_0403721_372_1289 305
12 3300045051 Ga0451576_0032283 Ga0451576_0032283_918_1835 305
13 3300005983 Ga0081540_1008571 Ga0081540_10085715 306
14 3300028558 Ga0265326_10005387 Ga0265326_100053872 306
15 3300028800 Ga0265338_10000025 Ga0265338_10000025241 306
16 3300028800 Ga0265338_10000101 Ga0265338_1000010147 306
17 3300028800 Ga0265338_10068249 Ga0265338_100682493 306
18 3300028800 Ga0265338_10079371 Ga0265338_100793713 306
19 3300028800 Ga0265338_10112026 Ga0265338_101120262 306
20 3300029957 Ga0265324_10000586 Ga0265324_1000058616 306
21 3300029957 Ga0265324_10000919 Ga0265324_100009198 306
22 3300029957 Ga0265324_10038994 Ga0265324_100389942 306
23 3300031247 Ga0265340_10005112 Ga0265340_100051125 306
24 3300031247 Ga0265340_10060732 Ga0265340_100607322 306
25 3300031249 Ga0265339_10042329 Ga0265339_100423292 306
26 3300031251 Ga0265327_10126010 Ga0265327_101260101 306
27 3300003320 rootH2_10152303 rootH2_101523035 307
28 3300003323 rootH1_10190938 rootH1_101909382 307
29 3300005327 Ga0070658_10052465 Ga0070658_100524652 307
30 3300005330 Ga0070690_100001373 Ga0070690_1000013735 307
31 3300005544 Ga0070686_100006705 Ga0070686_1000067057 307
32 3300005563 Ga0068855_100011480 Ga0068855_1000114805 307
33 3300005577 Ga0068857_100177346 Ga0068857_1001773462 307
34 3300005614 Ga0068856_100000080 Ga0068856_10000008052 307
35 3300005617 Ga0068859_100429672 Ga0068859_1004296721 307
36 3300005617 Ga0068859_100721316 Ga0068859_1007213161 307
37 3300005618 Ga0068864_100079240 Ga0068864_1000792402 307
38 3300005842 Ga0068858_100039758 Ga0068858_1000397582 307
39 3300005937 Ga0081455_10152071 Ga0081455_101520712 307
40 3300006931 Ga0097620_100019540 Ga0097620_1000195404 307
41 3300006931 Ga0097620_100429675 Ga0097620_1004296751 307
42 3300006931 Ga0097620_100721429 Ga0097620_1007214291 307
43 3300009093 Ga0105240_10053849 Ga0105240_100538495 307
44 3300009093 Ga0105240_10611305 Ga0105240_106113052 307
45 3300009176 Ga0105242_10073853 Ga0105242_100738532 307
46 3300009177 Ga0105248_10441603 Ga0105248_104416031 307
47 3300014969 Ga0157376_10433668 Ga0157376_104336681 307
48 3300025909 Ga0207705_10068747 Ga0207705_100687472 307
49 3300025913 Ga0207695_10182717 Ga0207695_101827173 307
50 3300025916 Ga0207663_10002293 Ga0207663_100022932 307
51 3300025949 Ga0207667_10011516 Ga0207667_100115165 307
52 3300026035 Ga0207703_10042214 Ga0207703_100422142 307
53 3300026078 Ga0207702_10123517 Ga0207702_101235172 307
54 3300026095 Ga0207676_10331285 Ga0207676_103312852 307
55 3300026116 Ga0207674_10119310 Ga0207674_101193102 307
56 3300028556 Ga0265337_1000079 Ga0265337_10000799 307
57 3300028556 Ga0265337_1001254 Ga0265337_10012545 307
58 3300028556 Ga0265337_1001494 Ga0265337_10014947 307
59 3300028556 Ga0265337_1053917 Ga0265337_10539171 307
60 3300028563 Ga0265319_1000004 Ga0265319_100000451 307
61 3300028563 Ga0265319_1011592 Ga0265319_10115923 307
62 3300028563 Ga0265319_1043011 Ga0265319_10430111 307
63 3300028653 Ga0265323_10000819 Ga0265323_100008192 307
64 3300028653 Ga0265323_10010196 Ga0265323_100101963 307
65 3300028654 Ga0265322_10056368 Ga0265322_100563681 307
66 3300028666 Ga0265336_10003311 Ga0265336_100033115 307
67 3300028666 Ga0265336_10011396 Ga0265336_100113962 307
68 3300028666 Ga0265336_10019301 Ga0265336_100193012 307
69 3300028800 Ga0265338_10000041 Ga0265338_10000041160 307
70 3300028800 Ga0265338_10000402 Ga0265338_1000040235 307
71 3300028800 Ga0265338_10000702 Ga0265338_1000070230 307
72 3300028800 Ga0265338_10002357 Ga0265338_1000235714 307
73 3300028800 Ga0265338_10003775 Ga0265338_100037756 307
74 3300028800 Ga0265338_10004211 Ga0265338_100042119 307
75 3300028800 Ga0265338_10006441 Ga0265338_100064414 307
76 3300028800 Ga0265338_10007563 Ga0265338_100075635 307
77 3300028800 Ga0265338_10012284 Ga0265338_100122842 307
78 3300028800 Ga0265338_10018315 Ga0265338_100183153 307
79 3300028800 Ga0265338_10074523 Ga0265338_100745231 307
80 3300028800 Ga0265338_10077908 Ga0265338_100779083 307
81 3300028800 Ga0265338_10113363 Ga0265338_101133632 307
82 3300029957 Ga0265324_10049518 Ga0265324_100495182 307
83 3300029957 Ga0265324_10070233 Ga0265324_100702332 307
84 3300031240 Ga0265320_10002390 Ga0265320_100023902 307
85 3300031240 Ga0265320_10005430 Ga0265320_100054308 307
86 3300031240 Ga0265320_10007756 Ga0265320_100077566 307
87 3300031240 Ga0265320_10020118 Ga0265320_100201182 307
88 3300031241 Ga0265325_10037072 Ga0265325_100370722 307
89 3300031249 Ga0265339_10007534 Ga0265339_100075346 307
90 3300031249 Ga0265339_10109439 Ga0265339_101094392 307
91 3300031251 Ga0265327_10001083 Ga0265327_100010836 307
92 3300031344 Ga0265316_10004016 Ga0265316_100040166 307
93 3300031344 Ga0265316_10014775 Ga0265316_100147757 307
94 3300031344 Ga0265316_10060552 Ga0265316_100605522 307
95 3300031344 Ga0265316_10130850 Ga0265316_101308502 307
96 3300031344 Ga0265316_10198038 Ga0265316_101980381 307
97 3300031595 Ga0265313_10001779 Ga0265313_1000177912 307
98 3300031595 Ga0265313_10008477 Ga0265313_100084772 307
99 3300031711 Ga0265314_10111600 Ga0265314_101116001 307
100 3300031711 Ga0265314_10122097 Ga0265314_101220972 307
101 3300031712 Ga0265342_10050610 Ga0265342_100506102 307
102 3300031712 Ga0265342_10139570 Ga0265342_101395702 307
103 3300031727 Ga0316576_10260554 Ga0316576_102605542 307
104 3300034816 Ga0373930_0000039 Ga0373930_0000039_9723_10646 307
105 3300035083 Ga0373926_0050993 Ga0373926_0050993_20_943 307
106 3300035089 Ga0373944_0000379 Ga0373944_0000379_5618_6541 307
107 3300035091 Ga0373951_0003537 Ga0373951_0003537_1548_2471 307
108 3300035112 Ga0373932_0000001 Ga0373932_0000001_941263_942186 307
109 3300035116 Ga0373945_0003398 Ga0373945_0003398_2929_3852 307
110 3300035118 Ga0373954_0004641 Ga0373954_0004641_2605_3531 307
111 3300035118 Ga0373954_0046908 Ga0373954_0046908_475_1398 307
112 3300035170 Ga0373943_0018028 Ga0373943_0018028_637_1560 307
113 3300035691 Ga0373931_0000002 Ga0373931_0000002_553212_554135 307
114 3300035692 Ga0373935_0017144 Ga0373935_0017144_665_1588 307
115 3300035695 Ga0373927_0019301 Ga0373927_0019301_2545_3468 307
116 3300035724 Ga0373933_0072736 Ga0373933_0072736_927_1853 307
117 3300035725 Ga0373947_0018451 Ga0373947_0018451_204_1127 307
118 3300035725 Ga0373947_0044250 Ga0373947_0044250_390_1313 307
119 3300036401 Ga0373937_0001417 Ga0373937_0001417_4257_5183 307
120 3300036401 Ga0373937_0055842 Ga0373937_0055842_644_1567 307
121 3300037068 Ga0373925_0000077 Ga0373925_0000077_98259_99182 307
122 3300037068 Ga0373925_0045022 Ga0373925_0045022_2150_3076 307
123 3300038443 Ga0395901_0147149 Ga0395901_0147149_885_1814 307
124 3300042876 Ga0451577_0018632 Ga0451577_0018632_493_1425 307
125 3300044712 Ga0453684_0000596 Ga0453684_0000596_34460_35392 307
126 3300044712 Ga0453684_0007471 Ga0453684_0007471_3798_4721 307
127 3300044712 Ga0453684_0128270 Ga0453684_0128270_621_1565 307
128 3300044712 Ga0453684_0199312 Ga0453684_0199312_176_1099 307
129 3300045051 Ga0451576_0242540 Ga0451576_0242540_568_1506 307
130 3300045051 Ga0451576_0280406 Ga0451576_0280406_583_1506 307
131 3300045051 Ga0451576_0344582 Ga0451576_0344582_48_971 307
132 3300046459 Ga0495629_0022389 Ga0495629_0022389_3120_4046 307
133 3300046459 Ga0495629_0255849 Ga0495629_0255849_170_1099 307
134 3300046462 Ga0495651_0149159 Ga0495651_0149159_501_1436 307
135 3300046462 Ga0495651_0324250 Ga0495651_0324250_59_982 307
136 3300046473 Ga0495582_0005660 Ga0495582_0005660_2210_3139 307
137 3300046514 Ga0495618_0013771 Ga0495618_0013771_3685_4611 307
138 3300046514 Ga0495618_0025222 Ga0495618_0025222_2685_3614 307
139 3300046516 Ga0495628_0226637 Ga0495628_0226637_12_995 307
140 3300046517 Ga0495630_0000210 Ga0495630_0000210_4385_5314 307
141 3300046517 Ga0495630_0007064 Ga0495630_0007064_994_1917 307
142 3300046517 Ga0495630_0037051 Ga0495630_0037051_2249_3172 307
143 3300046526 Ga0495666_0001836 Ga0495666_0001836_1900_2829 307
144 3300046535 Ga0495586_0000094 Ga0495586_0000094_4385_5314 307
145 3300046535 Ga0495586_0004817 Ga0495586_0004817_27_953 307
146 3300046559 Ga0495667_0020888 Ga0495667_0020888_2008_2934 307
147 3300046642 Ga0495634_0002157 Ga0495634_0002157_398_1324 307
148 3300046663 Ga0495635_0009487 Ga0495635_0009487_5198_6124 307
149 3300046681 Ga0495647_0126939 Ga0495647_0126939_16_957 307
150 3300046689 Ga0495613_0002455 Ga0495613_0002455_11487_12413 307
151 3300046689 Ga0495613_0102226 Ga0495613_0102226_27_956 307
152 3300046690 Ga0495624_0147309 Ga0495624_0147309_234_1238 307
153 3300047319 Ga0495674_0002905 Ga0495674_0002905_12289_13218 307
154 3300047321 Ga0495676_0013661 Ga0495676_0013661_4388_5317 307
155 3300047321 Ga0495676_0105552 Ga0495676_0105552_1044_1985 307
156 3300047322 Ga0495680_0034532 Ga0495680_0034532_2133_3059 307
157 3300047472 Ga0495686_0245647 Ga0495686_0245647_55_984 307
158 3300048909 Ga0496106_0142045 Ga0496106_0142045_300_1223 307
159 3300049568 Ga0501031_0000391 Ga0501031_0000391_19373_20296 307
160 3300049569 Ga0501032_0006975 Ga0501032_0006975_6040_6963 307
161 3300049569 Ga0501032_0015439 Ga0501032_0015439_1148_2071 307
162 3300049570 Ga0501033_0004045 Ga0501033_0004045_7453_8376 307
163 3300049570 Ga0501033_0007002 Ga0501033_0007002_4888_5811 307
164 3300049571 Ga0501034_0109372 Ga0501034_0109372_157_1080 307
165 3300049579 Ga0501043_0053536 Ga0501043_0053536_795_1718 307
166 3300049581 Ga0501047_0150906 Ga0501047_0150906_141_1064 307
167 3300049581 Ga0501047_0279800 Ga0501047_0279800_260_1183 307
168 3300049822 Ga0501035_0002983 Ga0501035_0002983_6975_7898 307
169 3300049823 Ga0501044_0000741 Ga0501044_0000741_5488_6411 307
170 3300049823 Ga0501044_0006067 Ga0501044_0006067_2537_3460 307
171 3300049823 Ga0501044_0224714 Ga0501044_0224714_72_995 307
172 3300050508 nmdc:mga09592_254151_c1 nmdc:mga09592_254151_c1_24_962 307
173 3300050514 nmdc:mga08x19_173009_c1 nmdc:mga08x19_173009_c1_352_1287 307
174 3300053098 Ga0500650_0022949 Ga0500650_0022949_204_1127 307

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06574

FAD_syn

FAD synthetase

35

192

0.98

PF01687

Flavokinase

Riboflavin kinase

209

332

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2i1l-assembly2.cif.gz_B crystal structure of the c2 form of fad synthetase from thermotoga maritima 0.9153 19 305
1t6z-assembly1.cif.gz_A crystal structure of riboflavin bound tm379 0.9049 19 305
2i1l-assembly1.cif.gz_A crystal structure of the c2 form of fad synthetase from thermotoga maritima 0.9014 19 305
1t6y-assembly1.cif.gz_A crystal structure of adp, amp, and fmn bound tm379 0.9003 19 305
1s4m-assembly2.cif.gz_B crystal structure of flavin binding to fad synthetase from thermotoga maritina 0.8981 18 305
ID Description Score Start End Superfamily
af_Q2G2Q2_2_185_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9496 14 185 3.40.50.620
af_I6X5C9_8_196_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9393 1 185 3.40.50.620
af_P0AG40_1_186_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9337 1 185 3.40.50.620
af_P0AG40_1_186_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9242 1 185 3.40.50.620
af_P0AG40_187_311_2.40.30.30 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Riboflavin kinase-like 0.9218 186 303 2.40.30.30
ID Description Score Start End GO Terms
AF-A0A7J4GKN9-F1-model_v4 deleted 0.979 1 224
AF-A0A645H6L3-F1-model_v4 FAD synthase (EC 2.7.7.2) 0.9743 1 184 GO:0003919
GO:0005524
GO:0006747
GO:0008531
GO:0009231
GO:0009398
AF-A0A1V6JKF4-F1-model_v4 deleted 0.9738 1 305
AF-A0A2V8Q0R9-F1-model_v4 Riboflavin biosynthesis protein [Includes: Riboflavin kinase (EC 2.7.1.26) (Flavokinase); FMN adenylyltransferase (EC 2.7.7.2) (FAD pyrophosphorylase) (FAD synthase)] 0.9731 32 306 GO:0003919
GO:0005524
GO:0006747
GO:0008531
GO:0009231
GO:0009398
AF-A0A2V6H6U2-F1-model_v4 FAD synthase (EC 2.7.7.2) 0.9723 1 172 GO:0003919
GO:0005524
GO:0006747
GO:0008531
GO:0009231
GO:0009398

Feature Viewer

pLDDT pTM Quality
92.83 0.89 High
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Predicted Structure (AlphaFold2)

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