F264976

General Info

Members Datasets Scaffolds Average Seq Length
174 120 151 338

Family's Representative Sequence

Representative Sequence 3300041404|Ga0439436_0001829|Ga0439436_0001829_2934_4010
Length 358
Sequence MTNAVTGSSASTHRISVVVPVYQGEKSLPDVVAELMKLAEPQISLAGHRFVVSEVLLVFDHGPDRSAEVIRDLAARYDIVRGVWLSRNFGQHPATLAGMASAGGDWVVTMDEDGQHDPAAIANMLDMAMAQQSTLVYALPSNKPPHGFLRNATSKGAKKVVAALLSSNDAVNYQSFRLVTGEVARSVAAYAGNAVYLDVALGWIASNVATCPVALRDEGDRTSGYRLRTLLSHFWRMVISSGTRGLRLVSLIGAIFAFLGVCLAVYLLIAYLTGHGAVGQQGWTSTMIVILISTGAILFSLGVIAEYVGVNVNMAMGKPAYLIVNDPSVGPLGKSAAEATDDSGLREATVSGGKTPNA

Samples

Sample ID Description Type Environment
1 2643221619 Agromyces sp. Root81 Isolate Unclassified
2 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
3 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
4 2643221721 Oerskovia sp. Root918 Isolate Unclassified
5 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
6 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
7 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
8 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
9 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
10 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
11 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
12 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
13 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
14 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
15 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
16 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
17 2922554459 Rhodococcus sp. 66b Isolate Unclassified
18 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
19 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
20 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
21 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
22 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
23 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
24 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
25 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
26 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
27 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
28 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
42 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
43 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
44 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
45 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
46 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
47 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
48 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
49 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
50 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
51 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
52 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
53 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
54 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
55 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
56 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
57 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
58 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
59 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
60 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
61 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
62 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
63 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
64 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
65 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
66 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
67 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
68 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
69 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
70 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
71 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
72 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
73 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
74 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
75 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
76 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
77 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
78 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
79 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
80 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
81 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
82 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
83 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
84 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
85 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
100 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
101 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
102 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
103 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
104 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
105 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
106 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
107 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
108 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
109 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
110 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
111 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
113 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
116 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
117 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
118 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
119 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
120 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.78
Metatranscriptomes 0
Isolates 13.22

Biome Distribution

Category Percentage (%)
Aerial Root 0.57
Bulb 0
Endosphere 5.17
Nodule 0
Rhizoplane 6.9
Rhizosphere 70.11
Stem 0
Stem Tuber 0
Unclassified 17.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJQas_1000262 3300000549 Bacteria 9567
2 Ga0065714_10008476 3300005288 Bacteria 2953
3 Ga0070689_100226707 3300005340 Bacteria 1535
4 Ga0070674_100055106 3300005356 Bacteria 2752
5 Ga0070700_100151890 3300005441 Bacteria 1585
6 Ga0070662_100157755 3300005457 Bacteria 1772
7 Ga0068861_100414798 3300005719 Bacteria 1198
8 Ga0075365_10017993 3300006038 Bacteria 4337
9 Ga0075365_10039254 3300006038 Bacteria 3082
10 Ga0075433_10297084 3300006852 Bacteria 1430
11 Ga0111539_10008072 3300009094 Bacteria 13416
12 Ga0105243_10003737 3300009148 Bacteria 12202
13 Ga0105243_10007609 3300009148 Bacteria 8327
14 Ga0105249_10120032 3300009553 Bacteria 2497
15 Ga0105246_10011858 3300011119 Bacteria 5421
16 Ga0163162_10173039 3300013306 Bacteria 2284
17 Ga0163161_10016999 3300017792 Bacteria 5086
18 Ga0207709_10001848 3300025935 Bacteria 14102
19 Ga0207712_10099828 3300025961 Bacteria 2156
20 Ga0316576_10010265 3300031727 Bacteria 6076
21 Ga0307410_10006545 3300031852 Bacteria 6295
22 Ga0307412_10237426 3300031911 Bacteria 1408
23 Ga0307409_100097420 3300031995 Bacteria 2429
24 Ga0439436_0001829 3300041404 Bacteria 6270
25 Ga0439436_0011079 3300041404 Bacteria 2741
26 Ga0439438_000449 3300041405 Bacteria 18620
27 Ga0439439_0002671 3300041406 Bacteria 3820
28 Ga0439461_0018924 3300041410 Bacteria 1352
29 Ga0439466_0006892 3300041411 Bacteria 4306
30 Ga0439466_0050861 3300041411 Unclassified 1358
31 Ga0439465_0045523 3300041413 Bacteria 1427
32 Ga0451793_0727564 3300041452 Bacteria 1288
33 Ga0451833_0347183 3300041491 Bacteria 11313
34 Ga0439433_0000004 3300041999 Bacteria 39895
35 Ga0439433_0000887 3300041999 Bacteria 5964
36 Ga0439442_000399 3300042002 Bacteria 10189
37 Ga0439442_001165 3300042002 Bacteria 5253
38 Ga0439442_005605 3300042002 Bacteria 2511
39 Ga0439432_000310 3300042006 Bacteria 17587
40 Ga0439449_0005762 3300042007 Unclassified 4738
41 Ga0439449_0017028 3300042007 Bacteria 2728
42 Ga0439457_001888 3300042014 Bacteria 6181
43 Ga0439462_0000634 3300042015 Bacteria 7066
44 Ga0439462_0001293 3300042015 Bacteria 5502
45 Ga0450920_000087 3300042122 Bacteria 12121
46 Ga0450920_000811 3300042122 Bacteria 5044
47 Ga0450907_000288 3300042146 Bacteria 17027
48 Ga0450907_003096 3300042146 Unclassified 3017
49 Ga0450909_002241 3300042185 Bacteria 2730
50 Ga0450909_007794 3300042185 Unclassified 1552
51 Ga0439434_0000093 3300042435 Bacteria 22456
52 Ga0450918_000190 3300042531 Bacteria 13717
53 Ga0450918_000380 3300042531 Bacteria 9713
54 Ga0466965_0024525 3300044683 Bacteria 2919
55 Ga0466963_0095432 3300044694 Bacteria 2030
56 Ga0466970_0203768 3300044765 Bacteria 1101
57 Ga0495668_0000167 3300046616 Bacteria 97427
58 Ga0495672_0008022 3300047320 Bacteria 7855
59 Ga0496104_0063637 3300048907 Bacteria 3499
60 Ga0496104_0273493 3300048907 Bacteria 1602
61 Ga0496105_0034036 3300048908 Bacteria 4189
62 Ga0496110_0063649 3300048913 Bacteria 3259
63 Ga0496111_0067511 3300048914 Bacteria 2598
64 Ga0496111_0153554 3300048914 Bacteria 1708
65 Ga0496112_0306933 3300048915 Bacteria 1532
66 Ga0496112_0417433 3300048915 Bacteria 1281
67 Ga0496113_0107592 3300048916 Bacteria 2167
68 Ga0496114_0034810 3300048917 Bacteria 4157
69 Ga0496114_0089638 3300048917 Bacteria 2610
70 Ga0496117_0000028 3300048920 Bacteria 407392
71 Ga0496117_0021242 3300048920 Bacteria 5261
72 Ga0496118_0048735 3300048921 Bacteria 3267
73 Ga0496119_0008653 3300048922 Bacteria 8907
74 Ga0496120_0000586 3300048923 Bacteria 55320
75 Ga0496120_0001838 3300048923 Bacteria 23651
76 Ga0496122_0000522 3300048925 Bacteria 79377
77 Ga0496122_0003004 3300048925 Bacteria 22932
78 Ga0496123_0000251 3300048926 Bacteria 108664
79 Ga0496123_0005772 3300048926 Bacteria 12302
80 Ga0496124_0001505 3300048927 Bacteria 34041
81 Ga0496124_0002708 3300048927 Bacteria 22632
82 Ga0496125_0002891 3300048928 Bacteria 21636
83 Ga0496125_0004133 3300048928 Bacteria 16948
84 Ga0496125_0011614 3300048928 Bacteria 8797
85 Ga0496126_0002688 3300048929 Bacteria 23495
86 Ga0496126_0010295 3300048929 Bacteria 9820
87 Ga0496126_0028222 3300048929 Bacteria 5351
88 Ga0496126_0028838 3300048929 Bacteria 5282
89 Ga0501031_0038535 3300049568 Bacteria 3119
90 Ga0501032_0125581 3300049569 Bacteria 1695
91 Ga0501033_0001979 3300049570 Bacteria 17852
92 Ga0501033_0012450 3300049570 Bacteria 6492
93 Ga0501033_0084212 3300049570 Bacteria 2330
94 Ga0501033_0225454 3300049570 Bacteria 1333
95 Ga0501034_0169216 3300049571 Bacteria 2153
96 Ga0501034_0195644 3300049571 Bacteria 1982
97 Ga0501034_0203839 3300049571 Bacteria 1935
98 Ga0501036_0003040 3300049572 Bacteria 13359
99 Ga0501036_0074913 3300049572 Bacteria 2863
100 Ga0501038_0008169 3300049574 Bacteria 9630
101 Ga0501038_0041763 3300049574 Bacteria 3999
102 Ga0501038_0194225 3300049574 Bacteria 1632
103 Ga0501039_0000451 3300049575 Bacteria 29795
104 Ga0501039_0015978 3300049575 Bacteria 5747
105 Ga0501040_0000070 3300049576 Bacteria 49605
106 Ga0501040_0113495 3300049576 Bacteria 1896
107 Ga0501041_0002587 3300049577 Bacteria 10318
108 Ga0501041_0107042 3300049577 Bacteria 1733
109 Ga0501042_0000926 3300049578 Bacteria 16510
110 Ga0501042_0009954 3300049578 Bacteria 6355
111 Ga0501042_0018406 3300049578 Bacteria 4835
112 Ga0501043_0025502 3300049579 Bacteria 4639
113 Ga0501046_0004614 3300049580 Bacteria 12445
114 Ga0501046_0073194 3300049580 Bacteria 2659
115 Ga0501047_0013949 3300049581 Bacteria 7635
116 Ga0501048_0002252 3300049582 Bacteria 14703
117 Ga0501048_0139465 3300049582 Bacteria 1714
118 Ga0501068_0001560 3300049584 Bacteria 12177
119 Ga0501068_0013247 3300049584 Bacteria 4690
120 Ga0501069_0151682 3300049585 Bacteria 1332
121 Ga0501071_0000007 3300049587 Bacteria 73318
122 Ga0501072_0000271 3300049588 Bacteria 37424
123 Ga0501072_0003030 3300049588 Bacteria 12675
124 Ga0501074_0000626 3300049590 Bacteria 21937
125 Ga0501075_0000031 3300049591 Bacteria 56103
126 Ga0501075_0042596 3300049591 Bacteria 3404
127 Ga0501076_0000122 3300049592 Bacteria 42920
128 Ga0501076_0007605 3300049592 Bacteria 7890
129 Ga0501077_0000055 3300049593 Bacteria 57590
130 Ga0501077_0013343 3300049593 Bacteria 5154
131 Ga0501079_0000235 3300049741 Bacteria 33165
132 Ga0501080_0000823 3300049742 Bacteria 25350
133 Ga0501081_0004620 3300049743 Bacteria 8842
134 Ga0501081_0028768 3300049743 Bacteria 3752
135 Ga0501083_0128359 3300049744 Bacteria 1662
136 Ga0501044_0004938 3300049823 Bacteria 14916
137 Ga0501044_0007439 3300049823 Bacteria 12045
138 Ga0501045_0000303 3300049824 Bacteria 28934
139 Ga0501045_0018040 3300049824 Bacteria 5013
140 nmdc:mga0yw44_10305_c1 3300050492 Bacteria 4767
141 nmdc:mga0yw44_11975_c1 3300050492 Bacteria 4502
142 nmdc:mga0yw44_16182_c2 3300050492 Bacteria 3677
143 nmdc:mga08y16_9971_c1 3300050511 Bacteria 9971
144 Ga0500650_0001000 3300053098 Bacteria 8018
145 Ga0500559_0000163 3300053136 Bacteria 52657
146 Ga0500559_0000293 3300053136 Bacteria 38669
147 Ga0500616_0001230 3300053153 Bacteria 25723
148 Ga0501084_0000352 3300054114 Bacteria 35071
149 Ga0501082_0002939 3300060353 Bacteria 14871
150 Ga0530510_0000530 3300061734 Bacteria 24441
151 Ga0530510_0091152 3300061734 Bacteria 2224

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049574 Ga0501038_0194225 Ga0501038_0194225_675_1604 281
2 3300048915 Ga0496112_0417433 Ga0496112_0417433_296_1216 299
3 3300053136 Ga0500559_0000293 Ga0500559_0000293_3895_4869 304
4 3300048907 Ga0496104_0273493 Ga0496104_0273493_667_1590 305
5 3300049584 Ga0501068_0013247 Ga0501068_0013247_2660_3649 306
6 3300049569 Ga0501032_0125581 Ga0501032_0125581_323_1360 312
7 3300049570 Ga0501033_0225454 Ga0501033_0225454_124_1161 312
8 3300049571 Ga0501034_0169216 Ga0501034_0169216_341_1378 312
9 3300049581 Ga0501047_0013949 Ga0501047_0013949_4158_5195 312
10 3300049823 Ga0501044_0004938 Ga0501044_0004938_3272_4309 312
11 3300048929 Ga0496126_0010295 Ga0496126_0010295_2441_3445 315
12 3300044694 Ga0466963_0095432 Ga0466963_0095432_242_1216 318
13 iso_pu_bacteria 2643221721 2644664164 318
14 3300031727 Ga0316576_10010265 Ga0316576_100102654 319
15 3300041491 Ga0451833_0347183 Ga0451833_0347183_6031_6990 319
16 3300009148 Ga0105243_10003737 Ga0105243_100037373 320
17 3300041452 Ga0451793_0727564 Ga0451793_0727564_22_990 321
18 3300049578 Ga0501042_0009954 Ga0501042_0009954_1202_2221 321
19 iso_pu_bacteria 2738543011 2739239232 321
20 iso_pu_bacteria 2643221681 2644455445 323
21 3300009094 Ga0111539_10008072 Ga0111539_100080723 325
22 3300009553 Ga0105249_10120032 Ga0105249_101200322 325
23 3300025961 Ga0207712_10099828 Ga0207712_100998282 325
24 3300050511 nmdc:mga08y16_9971_c1 nmdc:mga08y16_9971_c1_8735_9724 325
25 3300049570 Ga0501033_0084212 Ga0501033_0084212_609_1628 327
26 3300046616 Ga0495668_0000167 Ga0495668_0000167_88410_89438 328
27 3300048928 Ga0496125_0004133 Ga0496125_0004133_9635_10663 328
28 3300049823 Ga0501044_0007439 Ga0501044_0007439_5226_6212 328
29 3300053153 Ga0500616_0001230 Ga0500616_0001230_4822_5841 328
30 3300005356 Ga0070674_100055106 Ga0070674_1000551062 329
31 3300013306 Ga0163162_10173039 Ga0163162_101730391 329
32 3300017792 Ga0163161_10016999 Ga0163161_100169992 329
33 3300025935 Ga0207709_10001848 Ga0207709_1000184812 329
34 3300053136 Ga0500559_0000163 Ga0500559_0000163_33802_34791 329
35 3300005288 Ga0065714_10008476 Ga0065714_100084763 330
36 iso_pu_bacteria 2818991458 2819668161 330
37 iso_pu_bacteria 2643221635 2644197055 331
38 3300048907 Ga0496104_0063637 Ga0496104_0063637_559_1644 332
39 3300048917 Ga0496114_0034810 Ga0496114_0034810_1057_2142 332
40 3300005340 Ga0070689_100226707 Ga0070689_1002267071 333
41 3300005441 Ga0070700_100151890 Ga0070700_1001518901 333
42 3300005457 Ga0070662_100157755 Ga0070662_1001577552 333
43 3300005719 Ga0068861_100414798 Ga0068861_1004147982 333
44 3300006852 Ga0075433_10297084 Ga0075433_102970843 333
45 3300049568 Ga0501031_0038535 Ga0501031_0038535_471_1484 333
46 3300049570 Ga0501033_0012450 Ga0501033_0012450_2196_3209 333
47 3300049572 Ga0501036_0003040 Ga0501036_0003040_974_1987 333
48 3300049574 Ga0501038_0008169 Ga0501038_0008169_8471_9484 333
49 3300049574 Ga0501038_0041763 Ga0501038_0041763_1547_2557 333
50 3300049575 Ga0501039_0000451 Ga0501039_0000451_3695_4708 333
51 3300049575 Ga0501039_0015978 Ga0501039_0015978_78_1088 333
52 3300049576 Ga0501040_0000070 Ga0501040_0000070_36592_37605 333
53 3300049576 Ga0501040_0113495 Ga0501040_0113495_311_1321 333
54 3300049577 Ga0501041_0002587 Ga0501041_0002587_3648_4661 333
55 3300049577 Ga0501041_0107042 Ga0501041_0107042_701_1711 333
56 3300049578 Ga0501042_0000926 Ga0501042_0000926_14299_15312 333
57 3300049578 Ga0501042_0018406 Ga0501042_0018406_3713_4723 333
58 3300049580 Ga0501046_0004614 Ga0501046_0004614_7079_8092 333
59 3300049580 Ga0501046_0073194 Ga0501046_0073194_776_1786 333
60 3300049582 Ga0501048_0002252 Ga0501048_0002252_7091_8104 333
61 3300049582 Ga0501048_0139465 Ga0501048_0139465_500_1510 333
62 3300049584 Ga0501068_0001560 Ga0501068_0001560_2864_3877 333
63 3300049585 Ga0501069_0151682 Ga0501069_0151682_85_1098 333
64 3300049587 Ga0501071_0000007 Ga0501071_0000007_20735_21748 333
65 3300049588 Ga0501072_0000271 Ga0501072_0000271_115_1128 333
66 3300049588 Ga0501072_0003030 Ga0501072_0003030_11553_12563 333
67 3300049590 Ga0501074_0000626 Ga0501074_0000626_20521_21534 333
68 3300049591 Ga0501075_0000031 Ga0501075_0000031_22969_23982 333
69 3300049591 Ga0501075_0042596 Ga0501075_0042596_1701_2711 333
70 3300049592 Ga0501076_0000122 Ga0501076_0000122_5658_6671 333
71 3300049592 Ga0501076_0007605 Ga0501076_0007605_2132_3142 333
72 3300049593 Ga0501077_0000055 Ga0501077_0000055_19830_20843 333
73 3300049593 Ga0501077_0013343 Ga0501077_0013343_3755_4765 333
74 3300049741 Ga0501079_0000235 Ga0501079_0000235_377_1390 333
75 3300049742 Ga0501080_0000823 Ga0501080_0000823_8584_9597 333
76 3300049743 Ga0501081_0004620 Ga0501081_0004620_7548_8561 333
77 3300049743 Ga0501081_0028768 Ga0501081_0028768_67_1077 333
78 3300049744 Ga0501083_0128359 Ga0501083_0128359_197_1207 333
79 3300049824 Ga0501045_0000303 Ga0501045_0000303_5658_6671 333
80 3300049824 Ga0501045_0018040 Ga0501045_0018040_3462_4472 333
81 3300054114 Ga0501084_0000352 Ga0501084_0000352_34048_35061 333
82 3300060353 Ga0501082_0002939 Ga0501082_0002939_7273_8286 333
83 3300061734 Ga0530510_0000530 Ga0530510_0000530_16261_17274 333
84 3300009148 Ga0105243_10007609 Ga0105243_100076094 334
85 3300044683 Ga0466965_0024525 Ga0466965_0024525_328_1368 334
86 3300047320 Ga0495672_0008022 Ga0495672_0008022_1296_2300 334
87 3300048914 Ga0496111_0153554 Ga0496111_0153554_372_1376 334
88 3300048925 Ga0496122_0000522 Ga0496122_0000522_43052_44074 334
89 3300048926 Ga0496123_0000251 Ga0496123_0000251_71283_72305 334
90 3300048927 Ga0496124_0002708 Ga0496124_0002708_18772_19794 334
91 3300048928 Ga0496125_0011614 Ga0496125_0011614_6153_7175 334
92 3300048929 Ga0496126_0002688 Ga0496126_0002688_19949_20971 334
93 iso_pu_bacteria 2773857763 2774400305 334
94 3300044765 Ga0466970_0203768 Ga0466970_0203768_15_1025 335
95 3300048920 Ga0496117_0000028 Ga0496117_0000028_119189_120196 335
96 3300048923 Ga0496120_0001838 Ga0496120_0001838_12404_13411 335
97 3300048925 Ga0496122_0003004 Ga0496122_0003004_11666_12673 335
98 3300048926 Ga0496123_0005772 Ga0496123_0005772_9617_10624 335
99 3300048927 Ga0496124_0001505 Ga0496124_0001505_13364_14371 335
100 3300048928 Ga0496125_0002891 Ga0496125_0002891_12624_13631 335
101 3300048929 Ga0496126_0028838 Ga0496126_0028838_2018_3025 335
102 3300049570 Ga0501033_0001979 Ga0501033_0001979_7785_8795 335
103 3300049571 Ga0501034_0203839 Ga0501034_0203839_680_1690 335
104 3300049572 Ga0501036_0074913 Ga0501036_0074913_1348_2355 335
105 3300049579 Ga0501043_0025502 Ga0501043_0025502_3171_4181 335
106 iso_pu_bacteria 2818991318 2819424450 335
107 iso_pu_bacteria 2904765812 2904768358 335
108 iso_pu_bacteria 2908811453 2908815683 335
109 iso_pu_bacteria 2919420072 2919421729 335
110 iso_pu_bacteria 2919432681 2919434713 335
111 3300006038 Ga0075365_10039254 Ga0075365_100392543 336
112 3300048917 Ga0496114_0089638 Ga0496114_0089638_725_1753 336
113 3300049571 Ga0501034_0195644 Ga0501034_0195644_232_1242 336
114 3300050492 nmdc:mga0yw44_10305_c1 nmdc:mga0yw44_10305_c1_1070_2083 336
115 iso_pu_bacteria 2862993130 2862994717 336
116 iso_pu_bacteria 2922554459 2922558074 336
117 3300048915 Ga0496112_0306933 Ga0496112_0306933_105_1133 337
118 3300053098 Ga0500650_0001000 Ga0500650_0001000_2208_3242 337
119 3300048920 Ga0496117_0021242 Ga0496117_0021242_3621_4679 338
120 3300048921 Ga0496118_0048735 Ga0496118_0048735_1665_2723 338
121 3300048922 Ga0496119_0008653 Ga0496119_0008653_297_1355 338
122 3300048923 Ga0496120_0000586 Ga0496120_0000586_25379_26437 338
123 3300048929 Ga0496126_0028222 Ga0496126_0028222_4315_5331 338
124 3300061734 Ga0530510_0091152 Ga0530510_0091152_539_1558 338
125 iso_pu_bacteria 2643221619 2644111611 338
126 iso_pu_bacteria 2889300758 2889304186 338
127 iso_pu_bacteria 2939743619 2939745420 338
128 3300006038 Ga0075365_10017993 Ga0075365_100179932 339
129 3300048908 Ga0496105_0034036 Ga0496105_0034036_2651_3691 339
130 3300048913 Ga0496110_0063649 Ga0496110_0063649_908_1948 339
131 3300048914 Ga0496111_0067511 Ga0496111_0067511_153_1193 339
132 3300048916 Ga0496113_0107592 Ga0496113_0107592_216_1256 339
133 3300050492 nmdc:mga0yw44_11975_c1 nmdc:mga0yw44_11975_c1_1347_2366 339
134 3300050492 nmdc:mga0yw44_16182_c2 nmdc:mga0yw44_16182_c2_2354_3376 339
135 iso_pu_bacteria 2964326757 2964327670 339
136 iso_pu_bacteria 2984523437 2984523545 339
137 iso_pu_bacteria 2721755702 2723642923 342
138 3300041405 Ga0439438_000449 Ga0439438_000449_5609_6700 343
139 3300041406 Ga0439439_0002671 Ga0439439_0002671_2342_3433 343
140 3300041410 Ga0439461_0018924 Ga0439461_0018924_66_1157 343
141 3300041411 Ga0439466_0006892 Ga0439466_0006892_1887_2978 343
142 3300041999 Ga0439433_0000004 Ga0439433_0000004_14265_15356 343
143 3300042002 Ga0439442_005605 Ga0439442_005605_1059_2150 343
144 3300042006 Ga0439432_000310 Ga0439432_000310_5420_6511 343
145 3300042014 Ga0439457_001888 Ga0439457_001888_4417_5508 343
146 3300042015 Ga0439462_0000634 Ga0439462_0000634_3454_4545 343
147 3300042122 Ga0450920_000811 Ga0450920_000811_1613_2704 343
148 3300042146 Ga0450907_000288 Ga0450907_000288_14287_15378 343
149 3300042185 Ga0450909_002241 Ga0450909_002241_1260_2351 343
150 3300042435 Ga0439434_0000093 Ga0439434_0000093_14975_16066 343
151 3300042531 Ga0450918_000190 Ga0450918_000190_12224_13315 343
152 iso_pu_bacteria 2738543034 2739362988 343
153 3300041413 Ga0439465_0045523 Ga0439465_0045523_190_1266 344
154 iso_pu_bacteria 2939598168 2939598639 347
155 iso_pu_bacteria 2945941187 2945942433 347
156 iso_pu_bacteria 2946037020 2946038375 347
157 3300031852 Ga0307410_10006545 Ga0307410_100065452 349
158 3300031911 Ga0307412_10237426 Ga0307412_102374261 349
159 3300031995 Ga0307409_100097420 Ga0307409_1000974202 349
160 3300000549 LJQas_1000262 LJQas_10002626 351
161 3300011119 Ga0105246_10011858 Ga0105246_100118584 351
162 3300041404 Ga0439436_0001829 Ga0439436_0001829_2934_4010 351
163 3300041404 Ga0439436_0011079 Ga0439436_0011079_1218_2273 351
164 3300041411 Ga0439466_0050861 Ga0439466_0050861_196_1272 351
165 3300041999 Ga0439433_0000887 Ga0439433_0000887_3740_4816 351
166 3300042002 Ga0439442_000399 Ga0439442_000399_4051_5106 351
167 3300042002 Ga0439442_001165 Ga0439442_001165_858_1934 351
168 3300042007 Ga0439449_0005762 Ga0439449_0005762_3476_4552 351
169 3300042007 Ga0439449_0017028 Ga0439449_0017028_1409_2464 351
170 3300042015 Ga0439462_0001293 Ga0439462_0001293_4197_5273 351
171 3300042122 Ga0450920_000087 Ga0450920_000087_2997_4073 351
172 3300042146 Ga0450907_003096 Ga0450907_003096_967_2043 351
173 3300042185 Ga0450909_007794 Ga0450909_007794_422_1498 351
174 3300042531 Ga0450918_000380 Ga0450918_000380_6442_7518 351

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00535

Glycos_transf_2

Glycosyl transferase family 2

16

186

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zbh-assembly4.cif.gz_E geobacillus thermodenitrificans esxa crystal form i 0.784 246 316
2d7i-assembly1.cif.gz_A crystal structure of pp-galnac-t10 with udp, galnac and mn2+ 0.775 10 139
7msn-assembly1.cif.gz_A suns glycosin s-glycosyltransferase 0.7698 11 138
7msn-assembly1.cif.gz_B suns glycosin s-glycosyltransferase 0.7463 11 138
7msk-assembly1.cif.gz_B thus glycosin s-glycosyltransferase 0.734 9 139
ID Description Score Start End Superfamily
af_P77293_1_188_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8312 14 204 3.90.550.10
af_P77293_1_188_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8072 14 204 3.90.550.10
af_P9WMX5_1_216_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8047 14 233 3.90.550.10
af_Q2G2T7_1_208_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8021 14 214 3.90.550.10
af_P40350_49_327_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7982 9 217 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A7K0TP16-F1-model_v4 Glycosyltransferase 0.9101 1 210 GO:0005886
GO:0099621
AF-A0A7K0TP16-F1-model_v4 Glycosyltransferase 0.8939 1 210 GO:0005886
GO:0099621
AF-A0A4Q3ZJK6-F1-model_v4 deleted 0.8871 11 180
AF-A0A383C3Z3-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.877 14 209 GO:0005886
GO:0099621
AF-A0A1Z9DRU1-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.8721 14 232 GO:0005886
GO:0099621

Feature Viewer

pLDDT pTM Quality
77.72 0.7 High
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Predicted Structure (AlphaFold2)

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