F265079

General Info

Members Datasets Scaffolds Average Seq Length
174 106 174 297

Family's Representative Sequence

Representative Sequence 3300045976|Ga0466967_0233182|Ga0466967_0233182_866_1723
Length 285
Sequence MLFALGLGADLIAVTHECDYPDAARDLPKVTRDVLPTGLSSAQIDAAVKERTLAGQSIYELDTDMLRDLRPDLIVTQALCSVCAVSYDDVRAIAEEIESHPRVISLDPHTLGEVLGDARTLAQATDRKDAAVELVRDASARIDRIRLAVRGARRRPRVAALEWLDPPFAAGHWTPQLIEFAGGEDVLGFPGEHSEERSWREVEASQPDIVVVMPCGFDAEIAYREAEMHRDQLAALGAGEVVAVDAAAYFSRPGPRIVDGLELMAHILHPELVSEAPGRAITVEL

Samples

Sample ID Description Type Environment
1 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
2 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
6 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
7 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
8 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
9 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
13 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
14 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
15 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
16 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
17 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
18 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
19 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
20 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
21 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
22 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
23 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
24 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
25 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
38 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
39 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
40 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
41 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
42 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
43 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
47 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
48 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
54 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
57 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
58 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
59 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
60 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
61 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
62 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
63 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
64 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
65 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
66 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
70 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
71 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
72 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
73 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
74 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
75 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
76 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
77 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
78 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
79 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
80 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
92 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
93 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
94 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
95 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
96 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
97 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
98 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
99 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
100 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
101 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
102 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
103 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
104 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
105 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
106 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.57
Nodule 0
Rhizoplane 4.6
Rhizosphere 86.78
Stem 0
Stem Tuber 0
Unclassified 8.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100074598 3300005338 Bacteria 2709
2 Ga0070659_100000026 3300005366 Bacteria 143542
3 Ga0070714_100000315 3300005435 Bacteria 36636
4 Ga0070714_100006410 3300005435 Bacteria 9087
5 Ga0070714_100158417 3300005435 Bacteria 2046
6 Ga0070713_100010645 3300005436 Bacteria 6655
7 Ga0070713_100065183 3300005436 Bacteria 3059
8 Ga0068856_100029968 3300005614 Bacteria 5318
9 Ga0068856_100119642 3300005614 Bacteria 2635
10 Ga0068866_10041417 3300005718 Bacteria 2285
11 Ga0068861_100344007 3300005719 Bacteria 1306
12 Ga0081455_10053514 3300005937 Bacteria 3448
13 Ga0081538_10001995 3300005981 Bacteria 20393
14 Ga0081538_10016068 3300005981 Bacteria 5757
15 Ga0081538_10031996 3300005981 Bacteria 3536
16 Ga0081538_10033138 3300005981 Bacteria 3445
17 Ga0081538_10045880 3300005981 Bacteria 2703
18 Ga0081539_10001430 3300005985 Bacteria 40918
19 Ga0070717_10000004 3300006028 Bacteria 365525
20 Ga0070717_10061315 3300006028 Bacteria 3116
21 Ga0070717_10097855 3300006028 Bacteria 2486
22 Ga0070712_100032587 3300006175 Bacteria 3520
23 Ga0075428_100228965 3300006844 Bacteria 2006
24 Ga0075429_100030509 3300006880 Bacteria 4684
25 Ga0105240_10066853 3300009093 Bacteria 4458
26 Ga0105245_10131817 3300009098 Bacteria 2345
27 Ga0105237_10003340 3300009545 Bacteria 19108
28 Ga0105239_10616322 3300010375 Bacteria 1238
29 Ga0157372_10349134 3300013307 Bacteria 1723
30 Ga0157375_10174460 3300013308 Bacteria 2299
31 Ga0157375_10732748 3300013308 Bacteria 1141
32 Ga0157376_10012066 3300014969 Bacteria 6396
33 Ga0213874_10001752 3300021377 Bacteria 4557
34 Ga0213876_10018801 3300021384 Bacteria 3649
35 Ga0213875_10005761 3300021388 Bacteria 6598
36 Ga0207695_10051179 3300025913 Bacteria 4339
37 Ga0207671_10002162 3300025914 Bacteria 21398
38 Ga0207693_10035636 3300025915 Bacteria 3923
39 Ga0207662_10359449 3300025918 Bacteria 979
40 Ga0207652_10240839 3300025921 Bacteria 1631
41 Ga0207700_10042914 3300025928 Bacteria 3319
42 Ga0207700_10171802 3300025928 Bacteria 1809
43 Ga0207700_10438333 3300025928 Bacteria 1150
44 Ga0207664_10000006 3300025929 Bacteria 408702
45 Ga0207664_10008765 3300025929 Bacteria 7074
46 Ga0207690_10000098 3300025932 Bacteria 71853
47 Ga0207691_10479766 3300025940 Bacteria 1057
48 Ga0207679_10065281 3300025945 Bacteria 2723
49 Ga0207679_10230232 3300025945 Bacteria 1564
50 Ga0207678_10125064 3300026067 Bacteria 2194
51 Ga0207678_10355848 3300026067 Bacteria 1263
52 Ga0207702_10029142 3300026078 Bacteria 4592
53 Ga0265337_1001237 3300028556 Bacteria 12935
54 Ga0265326_10001628 3300028558 Bacteria 7783
55 Ga0265319_1000862 3300028563 Bacteria 19267
56 Ga0265319_1001701 3300028563 Bacteria 12696
57 Ga0265318_10012682 3300028577 Bacteria 3577
58 Ga0265336_10000001 3300028666 Bacteria 916179
59 Ga0265338_10000228 3300028800 Bacteria 104553
60 Ga0265340_10000005 3300031247 Bacteria 204570
61 Ga0265327_10085558 3300031251 Bacteria 1548
62 Ga0265316_10016247 3300031344 Bacteria 6462
63 Ga0265316_10111652 3300031344 Bacteria 2070
64 Ga0307408_100037785 3300031548 Bacteria 3403
65 Ga0307413_10027191 3300031824 Bacteria 3166
66 Ga0307407_10006900 3300031903 Bacteria 5099
67 Ga0307407_10208993 3300031903 Bacteria 1313
68 Ga0307409_100053205 3300031995 Bacteria 3109
69 Ga0307409_100148899 3300031995 Bacteria 2029
70 Ga0307409_100340901 3300031995 Bacteria 1410
71 Ga0307416_100165365 3300032002 Bacteria 2051
72 Ga0307416_100577317 3300032002 Bacteria 1201
73 Ga0307416_100689753 3300032002 Bacteria 1109
74 Ga0307416_100987039 3300032002 Unclassified 945
75 Ga0307411_10023947 3300032005 Bacteria 3629
76 Ga0307415_100015602 3300032126 Bacteria 4504
77 Ga0395900_0013411 3300037418 Bacteria 8373
78 Ga0395898_0000955 3300037466 Bacteria 46041
79 Ga0395898_0170741 3300037466 Bacteria 2079
80 Ga0395898_0794530 3300037466 Bacteria 887
81 Ga0436364_0658850 3300037853 Bacteria 8892
82 Ga0436364_1362849 3300037853 Bacteria 6139
83 Ga0436365_0129652 3300039437 Bacteria 13774
84 Ga0436365_1551735 3300039437 Bacteria 3862
85 Ga0436365_1666267 3300039437 Bacteria 4379
86 Ga0436365_1886030 3300039437 Bacteria 2499
87 Ga0436361_0934441 3300039447 Bacteria 2173
88 Ga0436363_0330528 3300039450 Bacteria 1827
89 Ga0436363_0391877 3300039450 Bacteria 11742
90 Ga0436363_0678117 3300039450 Bacteria 33768
91 Ga0436363_1391452 3300039450 Bacteria 1199
92 Ga0451853_0781015 3300041512 Bacteria 2509
93 Ga0466969_0013906 3300044656 Bacteria 4236
94 Ga0466965_0162102 3300044683 Unclassified 1173
95 Ga0466966_0051111 3300044684 Bacteria 2628
96 Ga0466966_0091448 3300044684 Bacteria 1889
97 Ga0466966_0271226 3300044684 Unclassified 1021
98 Ga0466961_0013092 3300044693 Bacteria 5307
99 Ga0466961_0041386 3300044693 Bacteria 2954
100 Ga0466961_0049449 3300044693 Bacteria 2687
101 Ga0466961_0067160 3300044693 Bacteria 2278
102 Ga0466963_0036972 3300044694 Bacteria 3187
103 Ga0466963_0061268 3300044694 Bacteria 2515
104 Ga0466964_0176159 3300044706 Bacteria 1011
105 Ga0466968_0019735 3300044735 Bacteria 2716
106 Ga0466957_0104780 3300044842 Bacteria 1787
107 Ga0466957_0162011 3300044842 Bacteria 1453
108 Ga0466957_0286874 3300044842 Bacteria 1103
109 Ga0466959_0005116 3300045049 Bacteria 8928
110 Ga0466959_0087408 3300045049 Bacteria 2242
111 Ga0466959_0110734 3300045049 Bacteria 1960
112 Ga0466959_0122399 3300045049 Unclassified 1848
113 Ga0466958_0031315 3300045836 Bacteria 3161
114 Ga0466958_0103318 3300045836 Bacteria 1774
115 Ga0466967_0003569 3300045976 Bacteria 10201
116 Ga0466967_0022070 3300045976 Bacteria 5186
117 Ga0466967_0029167 3300045976 Bacteria 4615
118 Ga0466967_0041277 3300045976 Bacteria 3977
119 Ga0466967_0050145 3300045976 Bacteria 3654
120 Ga0466967_0117721 3300045976 Bacteria 2450
121 Ga0466967_0120040 3300045976 Bacteria 2427
122 Ga0466967_0213166 3300045976 Bacteria 1832
123 Ga0466967_0225858 3300045976 Bacteria 1781
124 Ga0466967_0233182 3300045976 Bacteria 1753
125 Ga0466967_0310930 3300045976 Bacteria 1518
126 Ga0495652_0138061 3300046529 Bacteria 1921
127 Ga0495623_0222423 3300046679 Bacteria 1075
128 Ga0495672_0013248 3300047320 Bacteria 5696
129 Ga0496103_0104959 3300048906 Bacteria 1791
130 Ga0496108_0134051 3300048911 Bacteria 2130
131 Ga0496108_0382661 3300048911 Bacteria 1229
132 Ga0496111_0015040 3300048914 Bacteria 5301
133 Ga0496112_0092179 3300048915 Bacteria 2999
134 Ga0496112_0509166 3300048915 Bacteria 1139
135 Ga0496113_0018251 3300048916 Bacteria 4884
136 Ga0496115_0003005 3300048918 Bacteria 12108
137 Ga0501031_0005564 3300049568 Bacteria 8208
138 Ga0501031_0091240 3300049568 Bacteria 1987
139 Ga0501031_0185955 3300049568 Bacteria 1357
140 Ga0501032_0013601 3300049569 Bacteria 5781
141 Ga0501034_0148810 3300049571 Bacteria 2317
142 Ga0501037_0275645 3300049573 Bacteria 1173
143 Ga0501038_0007956 3300049574 Bacteria 9766
144 Ga0501038_0252905 3300049574 Bacteria 1395
145 Ga0501038_0383046 3300049574 Bacteria 1091
146 Ga0501039_0002539 3300049575 Bacteria 13625
147 Ga0501039_0145585 3300049575 Bacteria 1862
148 Ga0501040_0068287 3300049576 Bacteria 2451
149 Ga0501041_0285525 3300049577 Bacteria 1039
150 Ga0501042_0146087 3300049578 Bacteria 1705
151 Ga0501042_0229425 3300049578 Bacteria 1339
152 Ga0501046_0006817 3300049580 Bacteria 10082
153 Ga0501046_0321247 3300049580 Bacteria 1128
154 Ga0501048_0014877 3300049582 Bacteria 5753
155 Ga0501070_0015751 3300049586 Bacteria 6358
156 Ga0501071_0031795 3300049587 Bacteria 3744
157 Ga0501072_0032415 3300049588 Bacteria 4092
158 Ga0501072_0074844 3300049588 Bacteria 2678
159 Ga0501073_0031509 3300049589 Bacteria 3782
160 Ga0501081_0072531 3300049743 Bacteria 2401
161 Ga0501045_0026308 3300049824 Bacteria 4185
162 Ga0501045_0039607 3300049824 Bacteria 3429
163 nmdc:mga09592_160239_c1 3300050508 Bacteria 1943
164 nmdc:mga09592_5907_c2 3300050508 Bacteria 4604
165 nmdc:mga0qj67_109865_c1 3300050509 Bacteria 2225
166 nmdc:mga06r32_306305_c1 3300050510 Unclassified 1574
167 nmdc:mga08y16_114191_c1 3300050511 Bacteria 2811
168 nmdc:mga08y16_474489_c1 3300050511 Bacteria 1273
169 nmdc:mga0rr50_24742_c1 3300050513 Bacteria 4164
170 Ga0500616_0002674 3300053153 Bacteria 14490
171 Ga0501084_0028903 3300054114 Bacteria 4635
172 Ga0501082_0314799 3300060353 Bacteria 1363
173 Ga0466962_0083395 3300061719 Bacteria 1529
174 Ga0530510_0009340 3300061734 Bacteria 6877

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300045976 Ga0466967_0213166 Ga0466967_0213166_644_1540 265
2 3300050513 nmdc:mga0rr50_24742_c1 nmdc:mga0rr50_24742_c1_523_1467 265
3 3300045976 Ga0466967_0050145 Ga0466967_0050145_229_1125 271
4 3300048918 Ga0496115_0003005 Ga0496115_0003005_7499_8449 274
5 3300025945 Ga0207679_10065281 Ga0207679_100652813 275
6 3300032002 Ga0307416_100165365 Ga0307416_1001653653 275
7 3300037466 Ga0395898_0794530 Ga0395898_0794530_10_852 278
8 3300049568 Ga0501031_0005564 Ga0501031_0005564_3277_4152 279
9 3300049573 Ga0501037_0275645 Ga0501037_0275645_75_950 279
10 3300049575 Ga0501039_0002539 Ga0501039_0002539_5274_6149 279
11 3300049576 Ga0501040_0068287 Ga0501040_0068287_1564_2439 279
12 3300049587 Ga0501071_0031795 Ga0501071_0031795_1869_2744 279
13 3300049824 Ga0501045_0039607 Ga0501045_0039607_1075_1950 279
14 3300054114 Ga0501084_0028903 Ga0501084_0028903_2070_2945 279
15 3300031995 Ga0307409_100340901 Ga0307409_1003409011 282
16 3300032002 Ga0307416_100987039 Ga0307416_1009870391 282
17 3300005937 Ga0081455_10053514 Ga0081455_100535143 283
18 3300010375 Ga0105239_10616322 Ga0105239_106163222 283
19 3300013308 Ga0157375_10174460 Ga0157375_101744604 283
20 3300041512 Ga0451853_0781015 Ga0451853_0781015_841_1728 283
21 3300048911 Ga0496108_0134051 Ga0496108_0134051_629_1516 283
22 3300005338 Ga0068868_100074598 Ga0068868_1000745983 284
23 3300005366 Ga0070659_100000026 Ga0070659_10000002641 284
24 3300005435 Ga0070714_100000315 Ga0070714_10000031532 284
25 3300005435 Ga0070714_100006410 Ga0070714_1000064108 284
26 3300005435 Ga0070714_100158417 Ga0070714_1001584172 284
27 3300005436 Ga0070713_100010645 Ga0070713_1000106452 284
28 3300005436 Ga0070713_100065183 Ga0070713_1000651833 284
29 3300005614 Ga0068856_100029968 Ga0068856_1000299683 284
30 3300005614 Ga0068856_100119642 Ga0068856_1001196422 284
31 3300005718 Ga0068866_10041417 Ga0068866_100414172 284
32 3300005719 Ga0068861_100344007 Ga0068861_1003440072 284
33 3300005981 Ga0081538_10001995 Ga0081538_1000199519 284
34 3300005981 Ga0081538_10016068 Ga0081538_100160687 284
35 3300005981 Ga0081538_10031996 Ga0081538_100319962 284
36 3300005981 Ga0081538_10033138 Ga0081538_100331382 284
37 3300005981 Ga0081538_10045880 Ga0081538_100458802 284
38 3300005985 Ga0081539_10001430 Ga0081539_1000143025 284
39 3300006028 Ga0070717_10000004 Ga0070717_1000000421 284
40 3300006028 Ga0070717_10061315 Ga0070717_100613154 284
41 3300006028 Ga0070717_10097855 Ga0070717_100978552 284
42 3300006175 Ga0070712_100032587 Ga0070712_1000325874 284
43 3300006844 Ga0075428_100228965 Ga0075428_1002289653 284
44 3300006880 Ga0075429_100030509 Ga0075429_1000305093 284
45 3300009093 Ga0105240_10066853 Ga0105240_100668533 284
46 3300009098 Ga0105245_10131817 Ga0105245_101318173 284
47 3300009545 Ga0105237_10003340 Ga0105237_1000334017 284
48 3300013307 Ga0157372_10349134 Ga0157372_103491342 284
49 3300013308 Ga0157375_10732748 Ga0157375_107327481 284
50 3300014969 Ga0157376_10012066 Ga0157376_100120665 284
51 3300021377 Ga0213874_10001752 Ga0213874_100017524 284
52 3300021384 Ga0213876_10018801 Ga0213876_100188014 284
53 3300021388 Ga0213875_10005761 Ga0213875_100057614 284
54 3300025913 Ga0207695_10051179 Ga0207695_100511794 284
55 3300025914 Ga0207671_10002162 Ga0207671_1000216219 284
56 3300025915 Ga0207693_10035636 Ga0207693_100356363 284
57 3300025918 Ga0207662_10359449 Ga0207662_103594491 284
58 3300025921 Ga0207652_10240839 Ga0207652_102408393 284
59 3300025928 Ga0207700_10042914 Ga0207700_100429144 284
60 3300025928 Ga0207700_10171802 Ga0207700_101718023 284
61 3300025928 Ga0207700_10438333 Ga0207700_104383332 284
62 3300025929 Ga0207664_10000006 Ga0207664_10000006369 284
63 3300025929 Ga0207664_10008765 Ga0207664_100087653 284
64 3300025932 Ga0207690_10000098 Ga0207690_100000986 284
65 3300025940 Ga0207691_10479766 Ga0207691_104797661 284
66 3300025945 Ga0207679_10230232 Ga0207679_102302322 284
67 3300026067 Ga0207678_10125064 Ga0207678_101250642 284
68 3300026067 Ga0207678_10355848 Ga0207678_103558482 284
69 3300026078 Ga0207702_10029142 Ga0207702_100291423 284
70 3300028556 Ga0265337_1001237 Ga0265337_10012379 284
71 3300028558 Ga0265326_10001628 Ga0265326_100016283 284
72 3300028563 Ga0265319_1000862 Ga0265319_100086221 284
73 3300028563 Ga0265319_1001701 Ga0265319_100170114 284
74 3300028577 Ga0265318_10012682 Ga0265318_100126824 284
75 3300028666 Ga0265336_10000001 Ga0265336_1000000156 284
76 3300028800 Ga0265338_10000228 Ga0265338_1000022857 284
77 3300031247 Ga0265340_10000005 Ga0265340_1000000556 284
78 3300031251 Ga0265327_10085558 Ga0265327_100855582 284
79 3300031344 Ga0265316_10016247 Ga0265316_100162472 284
80 3300031344 Ga0265316_10111652 Ga0265316_101116522 284
81 3300031548 Ga0307408_100037785 Ga0307408_1000377851 284
82 3300031824 Ga0307413_10027191 Ga0307413_100271914 284
83 3300031903 Ga0307407_10006900 Ga0307407_100069005 284
84 3300031903 Ga0307407_10208993 Ga0307407_102089931 284
85 3300031995 Ga0307409_100053205 Ga0307409_1000532053 284
86 3300031995 Ga0307409_100148899 Ga0307409_1001488992 284
87 3300032002 Ga0307416_100577317 Ga0307416_1005773172 284
88 3300032002 Ga0307416_100689753 Ga0307416_1006897532 284
89 3300032005 Ga0307411_10023947 Ga0307411_100239473 284
90 3300032126 Ga0307415_100015602 Ga0307415_1000156024 284
91 3300037418 Ga0395900_0013411 Ga0395900_0013411_5073_5981 284
92 3300037466 Ga0395898_0000955 Ga0395898_0000955_5278_6186 284
93 3300037466 Ga0395898_0170741 Ga0395898_0170741_421_1281 284
94 3300037853 Ga0436364_0658850 Ga0436364_0658850_6062_6952 284
95 3300037853 Ga0436364_1362849 Ga0436364_1362849_1136_2032 284
96 3300039437 Ga0436365_0129652 Ga0436365_0129652_4342_5232 284
97 3300039437 Ga0436365_1551735 Ga0436365_1551735_1798_2688 284
98 3300039437 Ga0436365_1666267 Ga0436365_1666267_1906_2838 284
99 3300039437 Ga0436365_1886030 Ga0436365_1886030_1219_2109 284
100 3300039447 Ga0436361_0934441 Ga0436361_0934441_48_938 284
101 3300039450 Ga0436363_0330528 Ga0436363_0330528_602_1492 284
102 3300039450 Ga0436363_0391877 Ga0436363_0391877_6186_7133 284
103 3300039450 Ga0436363_0678117 Ga0436363_0678117_9526_10458 284
104 3300039450 Ga0436363_1391452 Ga0436363_1391452_295_1149 284
105 3300044656 Ga0466969_0013906 Ga0466969_0013906_1496_2350 284
106 3300044683 Ga0466965_0162102 Ga0466965_0162102_216_1115 284
107 3300044684 Ga0466966_0051111 Ga0466966_0051111_1111_2025 284
108 3300044684 Ga0466966_0091448 Ga0466966_0091448_304_1194 284
109 3300044684 Ga0466966_0271226 Ga0466966_0271226_35_925 284
110 3300044693 Ga0466961_0013092 Ga0466961_0013092_2872_3771 284
111 3300044693 Ga0466961_0041386 Ga0466961_0041386_1106_2002 284
112 3300044693 Ga0466961_0049449 Ga0466961_0049449_185_1099 284
113 3300044693 Ga0466961_0067160 Ga0466961_0067160_144_998 284
114 3300044694 Ga0466963_0036972 Ga0466963_0036972_957_1850 284
115 3300044694 Ga0466963_0061268 Ga0466963_0061268_482_1378 284
116 3300044706 Ga0466964_0176159 Ga0466964_0176159_42_935 284
117 3300044735 Ga0466968_0019735 Ga0466968_0019735_1700_2554 284
118 3300044842 Ga0466957_0104780 Ga0466957_0104780_694_1590 284
119 3300044842 Ga0466957_0162011 Ga0466957_0162011_188_1081 284
120 3300044842 Ga0466957_0286874 Ga0466957_0286874_122_976 284
121 3300045049 Ga0466959_0005116 Ga0466959_0005116_2016_2870 284
122 3300045049 Ga0466959_0087408 Ga0466959_0087408_750_1664 284
123 3300045049 Ga0466959_0110734 Ga0466959_0110734_431_1330 284
124 3300045049 Ga0466959_0122399 Ga0466959_0122399_663_1562 284
125 3300045836 Ga0466958_0031315 Ga0466958_0031315_20_874 284
126 3300045836 Ga0466958_0103318 Ga0466958_0103318_549_1463 284
127 3300045976 Ga0466967_0003569 Ga0466967_0003569_4149_5105 284
128 3300045976 Ga0466967_0022070 Ga0466967_0022070_3447_4337 284
129 3300045976 Ga0466967_0029167 Ga0466967_0029167_1602_2492 284
130 3300045976 Ga0466967_0041277 Ga0466967_0041277_1990_2895 284
131 3300045976 Ga0466967_0117721 Ga0466967_0117721_1087_1977 284
132 3300045976 Ga0466967_0120040 Ga0466967_0120040_1200_2114 284
133 3300045976 Ga0466967_0225858 Ga0466967_0225858_137_1030 284
134 3300045976 Ga0466967_0233182 Ga0466967_0233182_866_1723 284
135 3300045976 Ga0466967_0310930 Ga0466967_0310930_480_1379 284
136 3300046529 Ga0495652_0138061 Ga0495652_0138061_215_1111 284
137 3300046679 Ga0495623_0222423 Ga0495623_0222423_188_1048 284
138 3300047320 Ga0495672_0013248 Ga0495672_0013248_4716_5606 284
139 3300048906 Ga0496103_0104959 Ga0496103_0104959_774_1721 284
140 3300048911 Ga0496108_0382661 Ga0496108_0382661_120_1010 284
141 3300048914 Ga0496111_0015040 Ga0496111_0015040_882_1736 284
142 3300048915 Ga0496112_0092179 Ga0496112_0092179_2008_2901 284
143 3300048915 Ga0496112_0509166 Ga0496112_0509166_221_1123 284
144 3300048916 Ga0496113_0018251 Ga0496113_0018251_2267_3160 284
145 3300049568 Ga0501031_0091240 Ga0501031_0091240_557_1459 284
146 3300049568 Ga0501031_0185955 Ga0501031_0185955_15_869 284
147 3300049569 Ga0501032_0013601 Ga0501032_0013601_602_1504 284
148 3300049571 Ga0501034_0148810 Ga0501034_0148810_26_928 284
149 3300049574 Ga0501038_0007956 Ga0501038_0007956_5163_6065 284
150 3300049574 Ga0501038_0252905 Ga0501038_0252905_381_1271 284
151 3300049574 Ga0501038_0383046 Ga0501038_0383046_107_997 284
152 3300049575 Ga0501039_0145585 Ga0501039_0145585_172_1074 284
153 3300049577 Ga0501041_0285525 Ga0501041_0285525_97_987 284
154 3300049578 Ga0501042_0146087 Ga0501042_0146087_453_1343 284
155 3300049578 Ga0501042_0229425 Ga0501042_0229425_188_1081 284
156 3300049580 Ga0501046_0006817 Ga0501046_0006817_4594_5496 284
157 3300049580 Ga0501046_0321247 Ga0501046_0321247_65_958 284
158 3300049582 Ga0501048_0014877 Ga0501048_0014877_2300_3202 284
159 3300049586 Ga0501070_0015751 Ga0501070_0015751_2168_3070 284
160 3300049588 Ga0501072_0032415 Ga0501072_0032415_279_1169 284
161 3300049588 Ga0501072_0074844 Ga0501072_0074844_44_946 284
162 3300049589 Ga0501073_0031509 Ga0501073_0031509_2549_3451 284
163 3300049743 Ga0501081_0072531 Ga0501081_0072531_1304_2194 284
164 3300049824 Ga0501045_0026308 Ga0501045_0026308_2484_3386 284
165 3300050508 nmdc:mga09592_160239_c1 nmdc:mga09592_160239_c1_262_1152 284
166 3300050508 nmdc:mga09592_5907_c2 nmdc:mga09592_5907_c2_3021_3914 284
167 3300050509 nmdc:mga0qj67_109865_c1 nmdc:mga0qj67_109865_c1_1046_1936 284
168 3300050510 nmdc:mga06r32_306305_c1 nmdc:mga06r32_306305_c1_43_933 284
169 3300050511 nmdc:mga08y16_114191_c1 nmdc:mga08y16_114191_c1_425_1318 284
170 3300050511 nmdc:mga08y16_474489_c1 nmdc:mga08y16_474489_c1_32_922 284
171 3300053153 Ga0500616_0002674 Ga0500616_0002674_11818_12714 284
172 3300060353 Ga0501082_0314799 Ga0501082_0314799_271_1173 284
173 3300061719 Ga0466962_0083395 Ga0466962_0083395_399_1292 284
174 3300061734 Ga0530510_0009340 Ga0530510_0009340_59_949 284

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01497

Peripla_BP_2

Periplasmic binding protein

1

247

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5m29-assembly2.cif.gz_B structure of cobinamide-bound btuf, the periplasmic vitamin b12 binding protein in e.coli 0.8623 12 267
5m34-assembly1.cif.gz_A structure of cobinamide-bound btuf mutant w66y, the periplasmic vitamin b12 binding protein in e.coli 0.8288 4 267
5m3b-assembly1.cif.gz_A structure of cobinamide-bound btuf mutant w66l, the periplasmic vitamin b12 binding protein in e.coli 0.8251 4 267
2rg7-assembly1.cif.gz_C apo- crystal structure of a periplasmic heme binding protein from shigella dysenteriae 0.8249 2 270
5m2q-assembly2.cif.gz_B structure of cobinamide-bound btuf mutant w66f, the periplasmic vitamin b12 binding protein in e.coli 0.8247 4 267
ID Description Score Start End Superfamily
5yscA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8698 2 137 3.40.50.1980
3nu1A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8332 2 137 3.40.50.1980
2r79A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8288 2 137 3.40.50.1980
af_P37028_141_266_3.40.50.1980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8275 141 267 3.40.50.1980
5m2qB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8253 141 267 3.40.50.1980
ID Description Score Start End GO Terms
AF-A0A7V8W9G3-F1-model_v4 Cobalamin-binding protein 0.9866 148 283
AF-A0A7V9KKE9-F1-model_v4 ABC transporter substrate-binding protein 0.976 114 284
AF-A0A535RHG8-F1-model_v4 Fe/B12 periplasmic-binding domain-containing protein 0.9726 104 264
AF-A0A831TH28-F1-model_v4 Cobalamin-binding protein 0.9707 101 284
AF-A0A534JU68-F1-model_v4 Cobalamin-binding protein 0.963 48 284

Feature Viewer

pLDDT pTM Quality
93.66 0.9 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map