F266732

General Info

Members Datasets Scaffolds Average Seq Length
175 102 175 474

Family's Representative Sequence

Representative Sequence 3300037853|Ga0436364_0855452|Ga0436364_0855452_578_2038
Length 486
Sequence MSGGTMSGTTDIPALTVSAIRDGLLSKNFSATELAKAALAFAEKENPSTNAFLTFSPERALATAARVDHEIATDGYVGTLAGVPLGVKDVIVTKGLRTTCGSHSLEHYVPPYDATAVFRLEAEGAVVIGKMNCDEFAMGSSNENSAFGPVRNPRALDRVPGGSSGGSAASVAQGTAVITLGSDTGGSIRQPASFCGVVGVTPTYGRVSRYGLVAFASSLDHIGPFGRNVADAATVLRAMGGRDELDSTSAFAPVDDYHAEMKHSVEGLKIGLPKEYFEGLRSDTGDVIQAAINQLEKLGCQIREISLPHTKYALSCYYIIATAEASSNLARYDGVRYSLRADSDTLSEMYRNSRGEGFGAEVKRRIMLGTYVLSAGYYDAYYRKAQQVRTLIARDFSQAFEDLDAILAPVSPFPAFKIGEKVDDPLSMYLSDIYTLTGSLAGVPCMSVPCGKSADGLPIGLQILAKHFDEATMFRIAYNFERATTR

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
34 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
35 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
36 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
37 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
41 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
59 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
60 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
61 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
64 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
65 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
68 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
69 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
70 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
71 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
72 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
73 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
78 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
79 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
80 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
83 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
84 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
85 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
86 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
87 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
88 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
89 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
90 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
91 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
92 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
93 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
94 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
95 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
99 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.57
Nodule 0
Rhizoplane 0.57
Rhizosphere 84.57
Stem 0
Stem Tuber 0
Unclassified 14.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10039847 3300005327 Bacteria 3790
2 Ga0070683_100005005 3300005329 Bacteria 10998
3 Ga0070683_100019376 3300005329 Bacteria 6043
4 Ga0070683_100067051 3300005329 Bacteria 3342
5 Ga0070691_10007006 3300005341 Bacteria 5165
6 Ga0070714_100009399 3300005435 Bacteria 7686
7 Ga0070713_100037636 3300005436 Bacteria 3913
8 Ga0070711_100021659 3300005439 Bacteria 4159
9 Ga0070663_100054411 3300005455 Bacteria 2860
10 Ga0070678_100021192 3300005456 Bacteria 4281
11 Ga0070681_10004420 3300005458 Bacteria 13392
12 Ga0070681_10030695 3300005458 Bacteria 5393
13 Ga0070679_100000603 3300005530 Bacteria 30622
14 Ga0070679_100051934 3300005530 Bacteria 4084
15 Ga0070679_100189193 3300005530 Bacteria 2028
16 Ga0070684_100026851 3300005535 Bacteria 4854
17 Ga0070684_100034112 3300005535 Bacteria 4349
18 Ga0068853_100252045 3300005539 Bacteria 1620
19 Ga0068855_100010536 3300005563 Bacteria 11150
20 Ga0068856_100006160 3300005614 Bacteria 11767
21 Ga0068859_100009488 3300005617 Bacteria 9828
22 Ga0081455_10026129 3300005937 Bacteria 5378
23 Ga0070717_10005352 3300006028 Bacteria 9359
24 Ga0070717_10025032 3300006028 Bacteria 4741
25 Ga0070717_10037623 3300006028 Bacteria 3930
26 Ga0070717_10050983 3300006028 Bacteria 3404
27 Ga0097621_100036597 3300006237 Bacteria 3927
28 Ga0097621_100209600 3300006237 Bacteria 1695
29 Ga0068871_100235661 3300006358 Bacteria 1590
30 Ga0075436_100002817 3300006914 Bacteria 11910
31 Ga0097620_100009488 3300006931 Bacteria 9828
32 Ga0105240_10001518 3300009093 Bacteria 39483
33 Ga0105240_10002071 3300009093 Bacteria 32871
34 Ga0105240_10131411 3300009093 Bacteria 3002
35 Ga0105245_10000921 3300009098 Bacteria 26713
36 Ga0105245_10115750 3300009098 Bacteria 2499
37 Ga0114129_10262886 3300009147 Bacteria 2312
38 Ga0105241_10030729 3300009174 Bacteria 4017
39 Ga0105242_10055011 3300009176 Bacteria 3255
40 Ga0105248_10097263 3300009177 Bacteria 3317
41 Ga0105237_10001515 3300009545 Bacteria 30472
42 Ga0105237_10013901 3300009545 Bacteria 8423
43 Ga0105237_10017078 3300009545 Bacteria 7530
44 Ga0105237_10051514 3300009545 Bacteria 4135
45 Ga0105239_10098780 3300010375 Bacteria 3227
46 Ga0157370_10011788 3300013104 Bacteria 9123
47 Ga0157370_10064603 3300013104 Bacteria 3464
48 Ga0157370_10169330 3300013104 Bacteria 2031
49 Ga0157369_10009266 3300013105 Bacteria 11264
50 Ga0157369_10032704 3300013105 Bacteria 5716
51 Ga0157369_10066367 3300013105 Bacteria 3882
52 Ga0157369_10340545 3300013105 Bacteria 1558
53 Ga0157374_10022969 3300013296 Bacteria 5570
54 Ga0157378_10006420 3300013297 Bacteria 10281
55 Ga0157372_10025941 3300013307 Bacteria 6375
56 Ga0157372_10035388 3300013307 Bacteria 5497
57 Ga0163163_10020413 3300014325 Bacteria 6238
58 Ga0163163_10021818 3300014325 Bacteria 6050
59 Ga0157376_10078376 3300014969 Bacteria 2829
60 Ga0213872_10000531 3300021361 Bacteria 29891
61 Ga0213876_10048984 3300021384 Bacteria 2232
62 Ga0213875_10000013 3300021388 Bacteria 305595
63 Ga0213875_10000019 3300021388 Bacteria 231333
64 Ga0213875_10023097 3300021388 Bacteria 2972
65 Ga0213871_10003298 3300021441 Bacteria 3094
66 Ga0207654_10012220 3300025911 Bacteria 4395
67 Ga0207707_10074683 3300025912 Bacteria 2957
68 Ga0207695_10000264 3300025913 Bacteria 132624
69 Ga0207695_10004694 3300025913 Bacteria 18502
70 Ga0207695_10006792 3300025913 Bacteria 14748
71 Ga0207671_10009709 3300025914 Bacteria 8015
72 Ga0207660_10053048 3300025917 Bacteria 2889
73 Ga0207652_10101240 3300025921 Bacteria 2544
74 Ga0207694_10019312 3300025924 Bacteria 5152
75 Ga0207687_10030268 3300025927 Bacteria 3649
76 Ga0207700_10001021 3300025928 Bacteria 16157
77 Ga0207700_10099183 3300025928 Bacteria 2319
78 Ga0207686_10002100 3300025934 Bacteria 10988
79 Ga0207711_10165226 3300025941 Bacteria 2006
80 Ga0207661_10022215 3300025944 Bacteria 4773
81 Ga0207661_10055760 3300025944 Bacteria 3171
82 Ga0207667_10013209 3300025949 Bacteria 9468
83 Ga0207667_10017287 3300025949 Bacteria 8124
84 Ga0207639_10057572 3300026041 Bacteria 2985
85 Ga0207678_10080668 3300026067 Bacteria 2785
86 Ga0207702_10011075 3300026078 Bacteria 7528
87 Ga0207702_10071455 3300026078 Bacteria 2988
88 Ga0207674_10002827 3300026116 Bacteria 21583
89 Ga0265338_10024248 3300028800 Bacteria 6203
90 Ga0265332_10011583 3300031238 Bacteria 3918
91 Ga0265332_10024252 3300031238 Bacteria 2670
92 Ga0265320_10005668 3300031240 Bacteria 7972
93 Ga0265325_10006531 3300031241 Bacteria 7074
94 Ga0265340_10054414 3300031247 Bacteria 1930
95 Ga0265339_10041435 3300031249 Bacteria 2556
96 Ga0265331_10024186 3300031250 Bacteria 3076
97 Ga0265316_10001374 3300031344 Bacteria 26206
98 Ga0265316_10007333 3300031344 Bacteria 10400
99 Ga0265316_10026282 3300031344 Bacteria 4845
100 Ga0265316_10080884 3300031344 Bacteria 2491
101 Ga0265314_10014720 3300031711 Bacteria 6241
102 Ga0265314_10031877 3300031711 Bacteria 3885
103 Ga0265342_10055566 3300031712 Bacteria 2350
104 Ga0373934_0008830 3300035086 Bacteria 3765
105 Ga0373957_0008643 3300035120 Bacteria 3309
106 Ga0373955_0020897 3300035172 Bacteria 3296
107 Ga0373935_0033544 3300035692 Bacteria 3196
108 Ga0373935_0079079 3300035692 Bacteria 2134
109 Ga0373927_0000760 3300035695 Bacteria 24648
110 Ga0373927_0003228 3300035695 Bacteria 11740
111 Ga0373927_0035286 3300035695 Bacteria 3252
112 Ga0373947_0001620 3300035725 Bacteria 13811
113 Ga0373947_0053399 3300035725 Bacteria 2437
114 Ga0373937_0001967 3300036401 Bacteria 17189
115 Ga0373937_0005056 3300036401 Bacteria 11230
116 Ga0373937_0044343 3300036401 Bacteria 4061
117 Ga0373937_0059505 3300036401 Bacteria 3511
118 Ga0373925_0000062 3300037068 Bacteria 114902
119 Ga0436364_0108386 3300037853 Bacteria 2105
120 Ga0436364_0217339 3300037853 Bacteria 14748
121 Ga0436364_0244843 3300037853 Bacteria 3750
122 Ga0436364_0337862 3300037853 Bacteria 10567
123 Ga0436364_0359618 3300037853 Bacteria 3378
124 Ga0436364_0366372 3300037853 Bacteria 231753
125 Ga0436364_0449695 3300037853 Bacteria 85327
126 Ga0436364_0623148 3300037853 Bacteria 15769
127 Ga0436364_0679470 3300037853 Bacteria 5554
128 Ga0436364_0855452 3300037853 Bacteria 4383
129 Ga0436364_0925658 3300037853 Bacteria 6122
130 Ga0436364_1243567 3300037853 Bacteria 2092
131 Ga0436364_1413738 3300037853 Bacteria 4901
132 Ga0436364_1554808 3300037853 Bacteria 2592
133 Ga0436365_0139104 3300039437 Bacteria 12303
134 Ga0436365_0523313 3300039437 Bacteria 4317
135 Ga0436365_0615466 3300039437 Bacteria 11462
136 Ga0436365_1019743 3300039437 Bacteria 2083
137 Ga0436365_1463321 3300039437 Bacteria 2711
138 Ga0436365_1575136 3300039437 Bacteria 4544
139 Ga0436360_0538473 3300039438 Bacteria 6352
140 Ga0436360_0869374 3300039438 Bacteria 1791
141 Ga0436361_0567168 3300039447 Bacteria 164343
142 Ga0436363_1560073 3300039450 Bacteria 10797
143 Ga0466967_0258482 3300045976 Bacteria 1666
144 Ga0495651_0128802 3300046462 Bacteria 1850
145 Ga0495580_0005960 3300046472 Bacteria 9993
146 Ga0495580_0037936 3300046472 Bacteria 3455
147 Ga0495580_0098645 3300046472 Bacteria 2032
148 Ga0495630_0048509 3300046517 Bacteria 3178
149 Ga0495587_0003504 3300046536 Bacteria 10451
150 Ga0495645_0086427 3300046543 Bacteria 2244
151 Ga0495635_0076920 3300046663 Bacteria 2287
152 Ga0495623_0066926 3300046679 Bacteria 2243
153 Ga0495674_0016177 3300047319 Bacteria 6959
154 Ga0495674_0136366 3300047319 Bacteria 2065
155 Ga0495675_0058683 3300047444 Bacteria 2440
156 Ga0495684_0015134 3300047471 Bacteria 5942
157 Ga0495684_0016913 3300047471 Bacteria 5619
158 Ga0495686_0006395 3300047472 Bacteria 9032
159 Ga0495686_0047112 3300047472 Bacteria 2723
160 Ga0495602_0002444 3300048088 Bacteria 18913
161 Ga0496115_0008876 3300048918 Bacteria 7452
162 Ga0501034_0048074 3300049571 Bacteria 4306
163 Ga0501034_0074125 3300049571 Bacteria 3412
164 Ga0501046_0019596 3300049580 Bacteria 5610
165 Ga0501047_0032430 3300049581 Bacteria 5042
166 Ga0501047_0059855 3300049581 Bacteria 3677
167 Ga0501047_0091136 3300049581 Bacteria 2926
168 Ga0501070_0010550 3300049586 Bacteria 7810
169 Ga0501080_0080525 3300049742 Bacteria 3027
170 Ga0501035_0014032 3300049822 Bacteria 7392
171 Ga0501035_0135323 3300049822 Bacteria 2146
172 Ga0501044_0001294 3300049823 Bacteria 29569
173 Ga0501044_0007259 3300049823 Bacteria 12187
174 Ga0501044_0025330 3300049823 Bacteria 6287
175 Ga0500568_0000422 3300053139 Bacteria 31974

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031712 Ga0265342_10055566 Ga0265342_100555663 446
2 3300028800 Ga0265338_10024248 Ga0265338_100242483 450
3 3300031238 Ga0265332_10011583 Ga0265332_100115832 450
4 3300031240 Ga0265320_10005668 Ga0265320_100056683 450
5 3300031249 Ga0265339_10041435 Ga0265339_100414353 450
6 3300031250 Ga0265331_10024186 Ga0265331_100241865 450
7 3300031344 Ga0265316_10007333 Ga0265316_100073335 450
8 3300031344 Ga0265316_10080884 Ga0265316_100808843 450
9 3300031711 Ga0265314_10031877 Ga0265314_100318773 450
10 3300031241 Ga0265325_10006531 Ga0265325_100065318 455
11 3300039437 Ga0436365_0523313 Ga0436365_0523313_2193_3596 455
12 3300031344 Ga0265316_10026282 Ga0265316_100262824 458
13 3300005329 Ga0070683_100005005 Ga0070683_1000050054 460
14 3300005329 Ga0070683_100067051 Ga0070683_1000670513 460
15 3300005341 Ga0070691_10007006 Ga0070691_100070065 460
16 3300005458 Ga0070681_10030695 Ga0070681_100306955 460
17 3300005530 Ga0070679_100051934 Ga0070679_1000519345 460
18 3300005535 Ga0070684_100026851 Ga0070684_1000268513 460
19 3300005535 Ga0070684_100034112 Ga0070684_1000341125 460
20 3300005539 Ga0068853_100252045 Ga0068853_1002520451 460
21 3300005563 Ga0068855_100010536 Ga0068855_1000105368 460
22 3300009093 Ga0105240_10001518 Ga0105240_100015188 460
23 3300009093 Ga0105240_10131411 Ga0105240_101314113 460
24 3300009098 Ga0105245_10000921 Ga0105245_1000092120 460
25 3300009174 Ga0105241_10030729 Ga0105241_100307294 460
26 3300009545 Ga0105237_10013901 Ga0105237_100139016 460
27 3300009545 Ga0105237_10017078 Ga0105237_100170785 460
28 3300010375 Ga0105239_10098780 Ga0105239_100987803 460
29 3300013104 Ga0157370_10011788 Ga0157370_100117885 460
30 3300013104 Ga0157370_10064603 Ga0157370_100646033 460
31 3300013105 Ga0157369_10009266 Ga0157369_100092666 460
32 3300013105 Ga0157369_10066367 Ga0157369_100663674 460
33 3300013307 Ga0157372_10025941 Ga0157372_100259413 460
34 3300013307 Ga0157372_10035388 Ga0157372_100353884 460
35 3300014325 Ga0163163_10020413 Ga0163163_100204135 460
36 3300025911 Ga0207654_10012220 Ga0207654_100122203 460
37 3300025912 Ga0207707_10074683 Ga0207707_100746833 460
38 3300025913 Ga0207695_10000264 Ga0207695_1000026444 460
39 3300025913 Ga0207695_10004694 Ga0207695_100046945 460
40 3300025917 Ga0207660_10053048 Ga0207660_100530482 460
41 3300025921 Ga0207652_10101240 Ga0207652_101012403 460
42 3300025924 Ga0207694_10019312 Ga0207694_100193125 460
43 3300025927 Ga0207687_10030268 Ga0207687_100302682 460
44 3300025944 Ga0207661_10055760 Ga0207661_100557604 460
45 3300025949 Ga0207667_10013209 Ga0207667_100132096 460
46 3300025949 Ga0207667_10017287 Ga0207667_100172875 460
47 3300026041 Ga0207639_10057572 Ga0207639_100575725 460
48 3300026078 Ga0207702_10071455 Ga0207702_100714552 460
49 3300026116 Ga0207674_10002827 Ga0207674_1000282718 460
50 3300036401 Ga0373937_0005056 Ga0373937_0005056_414_1826 460
51 3300031247 Ga0265340_10054414 Ga0265340_100544142 461
52 3300031711 Ga0265314_10014720 Ga0265314_100147206 461
53 3300046536 Ga0495587_0003504 Ga0495587_0003504_7906_9327 461
54 3300046679 Ga0495623_0066926 Ga0495623_0066926_215_1636 461
55 3300048088 Ga0495602_0002444 Ga0495602_0002444_7887_9308 461
56 3300005456 Ga0070678_100021192 Ga0070678_1000211924 462
57 3300005614 Ga0068856_100006160 Ga0068856_10000616010 462
58 3300005937 Ga0081455_10026129 Ga0081455_100261295 462
59 3300006028 Ga0070717_10050983 Ga0070717_100509834 462
60 3300013104 Ga0157370_10169330 Ga0157370_101693302 462
61 3300013105 Ga0157369_10032704 Ga0157369_100327044 462
62 3300014969 Ga0157376_10078376 Ga0157376_100783762 462
63 3300021388 Ga0213875_10000013 Ga0213875_10000013112 462
64 3300025928 Ga0207700_10099183 Ga0207700_100991831 462
65 3300026078 Ga0207702_10011075 Ga0207702_100110752 462
66 3300037853 Ga0436364_0449695 Ga0436364_0449695_62619_64061 462
67 3300047472 Ga0495686_0006395 Ga0495686_0006395_2116_3573 462
68 3300047472 Ga0495686_0047112 Ga0495686_0047112_496_1953 462
69 3300048918 Ga0496115_0008876 Ga0496115_0008876_2477_3922 462
70 3300005329 Ga0070683_100019376 Ga0070683_1000193767 463
71 3300005435 Ga0070714_100009399 Ga0070714_1000093992 463
72 3300005436 Ga0070713_100037636 Ga0070713_1000376363 463
73 3300005439 Ga0070711_100021659 Ga0070711_1000216595 463
74 3300005455 Ga0070663_100054411 Ga0070663_1000544112 463
75 3300005617 Ga0068859_100009488 Ga0068859_1000094886 463
76 3300006028 Ga0070717_10005352 Ga0070717_100053525 463
77 3300006028 Ga0070717_10025032 Ga0070717_100250323 463
78 3300006028 Ga0070717_10037623 Ga0070717_100376233 463
79 3300006237 Ga0097621_100036597 Ga0097621_1000365972 463
80 3300006358 Ga0068871_100235661 Ga0068871_1002356611 463
81 3300006931 Ga0097620_100009488 Ga0097620_1000094886 463
82 3300009098 Ga0105245_10115750 Ga0105245_101157502 463
83 3300009176 Ga0105242_10055011 Ga0105242_100550112 463
84 3300009545 Ga0105237_10051514 Ga0105237_100515145 463
85 3300013105 Ga0157369_10340545 Ga0157369_103405452 463
86 3300013297 Ga0157378_10006420 Ga0157378_100064207 463
87 3300021361 Ga0213872_10000531 Ga0213872_100005314 463
88 3300021384 Ga0213876_10048984 Ga0213876_100489842 463
89 3300021388 Ga0213875_10000019 Ga0213875_1000001934 463
90 3300021388 Ga0213875_10023097 Ga0213875_100230973 463
91 3300021441 Ga0213871_10003298 Ga0213871_100032982 463
92 3300025928 Ga0207700_10001021 Ga0207700_100010216 463
93 3300025934 Ga0207686_10002100 Ga0207686_100021003 463
94 3300025944 Ga0207661_10022215 Ga0207661_100222153 463
95 3300026067 Ga0207678_10080668 Ga0207678_100806683 463
96 3300035086 Ga0373934_0008830 Ga0373934_0008830_1046_2500 463
97 3300035120 Ga0373957_0008643 Ga0373957_0008643_1414_2838 463
98 3300035172 Ga0373955_0020897 Ga0373955_0020897_425_1849 463
99 3300035692 Ga0373935_0033544 Ga0373935_0033544_41_1495 463
100 3300035695 Ga0373927_0035286 Ga0373927_0035286_1610_3064 463
101 3300035725 Ga0373947_0053399 Ga0373947_0053399_362_1807 463
102 3300036401 Ga0373937_0001967 Ga0373937_0001967_1960_3384 463
103 3300036401 Ga0373937_0044343 Ga0373937_0044343_1463_2917 463
104 3300036401 Ga0373937_0059505 Ga0373937_0059505_1572_3026 463
105 3300037853 Ga0436364_0108386 Ga0436364_0108386_451_1899 463
106 3300037853 Ga0436364_0217339 Ga0436364_0217339_5700_7157 463
107 3300037853 Ga0436364_0244843 Ga0436364_0244843_243_1688 463
108 3300037853 Ga0436364_0337862 Ga0436364_0337862_691_2145 463
109 3300037853 Ga0436364_0359618 Ga0436364_0359618_1574_3022 463
110 3300037853 Ga0436364_0366372 Ga0436364_0366372_191954_193399 463
111 3300037853 Ga0436364_0623148 Ga0436364_0623148_5824_7278 463
112 3300037853 Ga0436364_0679470 Ga0436364_0679470_1141_2592 463
113 3300037853 Ga0436364_0855452 Ga0436364_0855452_578_2038 463
114 3300037853 Ga0436364_0925658 Ga0436364_0925658_3629_5077 463
115 3300037853 Ga0436364_1243567 Ga0436364_1243567_368_1813 463
116 3300037853 Ga0436364_1413738 Ga0436364_1413738_3262_4710 463
117 3300037853 Ga0436364_1554808 Ga0436364_1554808_601_2046 463
118 3300039437 Ga0436365_0139104 Ga0436365_0139104_7077_8525 463
119 3300039437 Ga0436365_0615466 Ga0436365_0615466_8136_9590 463
120 3300039437 Ga0436365_1019743 Ga0436365_1019743_594_2039 463
121 3300039437 Ga0436365_1463321 Ga0436365_1463321_876_2330 463
122 3300039438 Ga0436360_0538473 Ga0436360_0538473_2837_4282 463
123 3300039438 Ga0436360_0869374 Ga0436360_0869374_82_1527 463
124 3300039447 Ga0436361_0567168 Ga0436361_0567168_57818_59263 463
125 3300039450 Ga0436363_1560073 Ga0436363_1560073_3206_4654 463
126 3300045976 Ga0466967_0258482 Ga0466967_0258482_100_1542 463
127 3300046462 Ga0495651_0128802 Ga0495651_0128802_190_1644 463
128 3300046472 Ga0495580_0005960 Ga0495580_0005960_4478_5932 463
129 3300046472 Ga0495580_0098645 Ga0495580_0098645_398_1852 463
130 3300046517 Ga0495630_0048509 Ga0495630_0048509_914_2368 463
131 3300046543 Ga0495645_0086427 Ga0495645_0086427_14_1447 463
132 3300046663 Ga0495635_0076920 Ga0495635_0076920_106_1539 463
133 3300047319 Ga0495674_0016177 Ga0495674_0016177_760_2193 463
134 3300047319 Ga0495674_0136366 Ga0495674_0136366_195_1649 463
135 3300047444 Ga0495675_0058683 Ga0495675_0058683_236_1669 463
136 3300047471 Ga0495684_0015134 Ga0495684_0015134_1756_3210 463
137 3300047471 Ga0495684_0016913 Ga0495684_0016913_3806_5239 463
138 3300049571 Ga0501034_0048074 Ga0501034_0048074_1047_2474 463
139 3300049571 Ga0501034_0074125 Ga0501034_0074125_1947_3386 463
140 3300049580 Ga0501046_0019596 Ga0501046_0019596_1457_2896 463
141 3300049581 Ga0501047_0032430 Ga0501047_0032430_2921_4360 463
142 3300049581 Ga0501047_0059855 Ga0501047_0059855_1877_3319 463
143 3300049581 Ga0501047_0091136 Ga0501047_0091136_1190_2638 463
144 3300049586 Ga0501070_0010550 Ga0501070_0010550_3407_4846 463
145 3300049742 Ga0501080_0080525 Ga0501080_0080525_1552_2991 463
146 3300049822 Ga0501035_0014032 Ga0501035_0014032_5638_7077 463
147 3300049822 Ga0501035_0135323 Ga0501035_0135323_434_1876 463
148 3300049823 Ga0501044_0001294 Ga0501044_0001294_8682_10130 463
149 3300049823 Ga0501044_0007259 Ga0501044_0007259_5385_6827 463
150 3300049823 Ga0501044_0025330 Ga0501044_0025330_1598_3037 463
151 3300005327 Ga0070658_10039847 Ga0070658_100398474 464
152 3300005458 Ga0070681_10004420 Ga0070681_1000442014 464
153 3300005530 Ga0070679_100000603 Ga0070679_10000060314 464
154 3300005530 Ga0070679_100189193 Ga0070679_1001891931 464
155 3300006237 Ga0097621_100209600 Ga0097621_1002096002 464
156 3300006914 Ga0075436_100002817 Ga0075436_1000028177 464
157 3300009093 Ga0105240_10002071 Ga0105240_1000207124 464
158 3300009147 Ga0114129_10262886 Ga0114129_102628862 464
159 3300009177 Ga0105248_10097263 Ga0105248_100972631 464
160 3300009545 Ga0105237_10001515 Ga0105237_1000151521 464
161 3300013296 Ga0157374_10022969 Ga0157374_100229697 464
162 3300014325 Ga0163163_10021818 Ga0163163_100218184 464
163 3300025913 Ga0207695_10006792 Ga0207695_1000679212 464
164 3300025914 Ga0207671_10009709 Ga0207671_100097093 464
165 3300025941 Ga0207711_10165226 Ga0207711_101652263 464
166 3300031238 Ga0265332_10024252 Ga0265332_100242523 464
167 3300031344 Ga0265316_10001374 Ga0265316_1000137421 464
168 3300035692 Ga0373935_0079079 Ga0373935_0079079_40_1494 464
169 3300035695 Ga0373927_0000760 Ga0373927_0000760_2862_4316 464
170 3300035695 Ga0373927_0003228 Ga0373927_0003228_5991_7424 464
171 3300035725 Ga0373947_0001620 Ga0373947_0001620_10758_12191 464
172 3300037068 Ga0373925_0000062 Ga0373925_0000062_16680_18113 464
173 3300039437 Ga0436365_1575136 Ga0436365_1575136_1969_3423 464
174 3300046472 Ga0495580_0037936 Ga0495580_0037936_362_1789 464
175 3300053139 Ga0500568_0000422 Ga0500568_0000422_573_2000 464

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

33

474

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ip4-assembly1.cif.gz_A the high resolution structure of gatcab 0.8784 2 464
3ip4-assembly1.cif.gz_A the high resolution structure of gatcab 0.8748 2 464
4wj3-assembly2.cif.gz_D crystal structure of the asparagine transamidosome from pseudomonas aeruginosa 0.873 2 464
4wj3-assembly2.cif.gz_D crystal structure of the asparagine transamidosome from pseudomonas aeruginosa 0.8694 2 464
3h0r-assembly7.cif.gz_S structure of trna-dependent amidotransferase gatcab from aquifex aeolicus 0.8535 2 462
ID Description Score Start End Superfamily
2dqnA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8776 2 464 3.90.1300.10
2dqnA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.874 2 464 3.90.1300.10
4wj3D00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.873 2 464 3.90.1300.10
af_P9WQ93_21_468_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8716 6 464 3.90.1300.10
4wj3D00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8694 2 464 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A3C1FAL0-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A (EC 6.3.5.-) 0.9647 4 115 GO:0016740
GO:0016874
AF-A0A3C1FAL0-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A (EC 6.3.5.-) 0.9563 4 115 GO:0016740
GO:0016874
AF-A0A258IHR4-F1-model_v4 Amidase domain-containing protein 0.9529 353 463 GO:0003824
AF-A0A382LJH5-F1-model_v4 Amidase domain-containing protein 0.9484 3 121 GO:0050567
AF-X1TH17-F1-model_v4 Amidase domain-containing protein 0.9474 4 120 GO:0050567

Feature Viewer

pLDDT pTM Quality
79.03 0.84 High
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Predicted Structure (AlphaFold2)

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