F267481

General Info

Members Datasets Scaffolds Average Seq Length
176 135 352 467

Family's Representative Sequence

Representative Sequence 3300003316|rootH1_10034735|rootH1_100347352
Length 560
Sequence MVRIDANCFVLVQFLRPHGAPIPPMQNTSSSSFSPFFTTSRSVPDLRRLEDLEPHESPGGNCSGCRAGLPGLSPRSRRKSQDAEFRLPPRGRLVVVSNRMVDPAQPAAGGLAAALGGLMKETPGLWLGWSGKVNDGPGVGRPPLQSYGRTTLVPIDLSQAEHDHYYAGFANKVLWPVFHGQVQHAESDAQANARYFESYEQVNRKFASTLAGLLQEDDAIWVHDYHLIPLATELRRLGCRQRMGFFNHIPFPTLEALRQIPQHGRLVRSLFDYDLVGMQAQRDLDRFHEYVEIRGQGRRSDEGHVQAFGRMVRSQSFPIGIDVAQFTSQHGVADGGHVLSRLRRERRKRVLMVAVDRLDYTKGLPERLEAFRLLLERHPECRRHVTLAQVVSPSRESVAAYAAVRDRVRGMVDALNKDYGSRGWTPVLHFEDVVDRRALPEYFRLGRVGVVTPVADGMNLVAKEFVAAQDPELPGALVLSEAAGASAQLTQALMVDPKNPADMAETFHQALHMPLQQRVERHAALLQTVQDEDLQRWSDSYLEVLEGGDPPPLPADQPAA

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
3 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
4 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
7 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
8 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
9 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
10 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
11 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
12 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
13 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
16 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
20 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
26 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
27 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
28 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
29 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
30 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
31 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
32 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
33 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
34 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
39 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
40 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
41 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
42 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
43 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
44 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
45 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
46 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
47 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
48 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
49 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
50 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
51 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
52 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
53 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
54 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
55 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
58 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
59 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
60 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
61 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
62 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
63 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
64 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
65 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
66 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
67 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
68 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
69 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
70 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
71 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
72 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
73 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
74 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
85 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
86 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
87 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
88 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
89 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
95 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
97 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
98 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
99 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
100 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
101 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
102 2511231027 Phyllobacterium sp. YR531 Isolate Rhizosphere
103 2513237146 Rhizobium mongolense USDA 1844 (Illumina) Isolate Nodule
104 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
105 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
106 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
107 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
108 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
109 2599185170 Rhizobium mongolense USDA 1844 (PacBio) Isolate Nodule
110 2690316117 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
111 2765235802 Phyllobacterium bourgognense 31-25a Isolate Rhizoplane
112 2767802442 Phyllobacterium brassicacearum 29-15 Isolate Rhizoplane
113 2775506902 Phyllobacterium zundukense Tri-48 Isolate Unclassified
114 2775506904 Phyllobacterium zundukense Tri-38 Isolate Unclassified
115 2791355082 Ensifer alkalisoli YIC4027 Isolate Nodule
116 2838035591 Rhizobium mongolense SEMIA 4087 Isolate Nodule
117 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
118 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
119 2839993093 Phyllobacterium endophyticum PEPV15 Isolate Unclassified
120 2840764183 Phyllobacterium sophorae CCBAU 03422 Isolate Unclassified
121 2842694124 Methylopila sp. R-72369 Isolate Unclassified
122 2842871566 Phyllobacterium sp. R-73111 Isolate Unclassified
123 2847417321 Sinorhizobium fredii CCBAU 45436 Isolate Unclassified
124 2848992105 Sinorhizobium fredii CCBAU 25509 Isolate Unclassified
125 2858688981 Cupriavidus sp. UYMMa02A Isolate Unclassified
126 2889790730 Chelativorans xinjiangense lm93 Isolate Rhizosphere
127 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
128 2894652903 Phyllobacterium sp. SYP-B3895 Isolate Rhizosphere
129 2904578770 Phyllobacterium sp. 586 Isolate Unclassified
130 2919119836 Phyllobacterium sp. 1468 Isolate Rhizosphere
131 2928521798 Phyllobacterium ifriqiyense 1451 Isolate Rhizosphere
132 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
133 2954011201 Phyllobacterium ifrigiyense W4I11 Isolate Rhizosphere
134 643692032 Sinorhizobium fredii NGR234 Isolate Nodule
135 8049293176 Ensifer alkalisoli YIC4027 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 79.55
Metatranscriptomes 0
Isolates 20.45

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.43
Nodule 3.98
Rhizoplane 2.27
Rhizosphere 53.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10034735 3300003316 Bacteria 3396
2 JGI25152J39213_1006774 3300002773 Bacteria 3048
3 JGI25159J45721_1000244 3300002987 Bacteria 25671
4 JGI25159J45721_1000431 3300002987 Bacteria 19338
5 JGI25159J45721_1007033 3300002987 Bacteria 3282
6 JGI25151J46595_10004850 3300003187 Bacteria 7029
7 JGI25151J46595_10027643 3300003187 Bacteria 2270
8 rootL2_10135729 3300003322 Bacteria 7308
9 JGI25160J50197_1000012 3300003354 Bacteria 267582
10 JGI25161J50226_1000002 3300003374 Bacteria 420324
11 Ga0055526_1000006 3300003771 Bacteria 330857
12 Ga0055526_1011074 3300003771 Bacteria 4115
13 Ga0055526_1016348 3300003771 Bacteria 2911
14 Ga0055537_1000003 3300003773 Bacteria 220933
15 Ga0055524_1000009 3300003775 Bacteria 295254
16 Ga0055524_1005987 3300003775 Bacteria 5347
17 Ga0055534_1000004 3300003784 Bacteria 295251
18 Ga0055528_1000003 3300003790 Bacteria 330875
19 Ga0055540_1007867 3300003792 Bacteria 3939
20 Ga0055531_10000974 3300003794 Bacteria 22817
21 Ga0055543_1000011 3300004625 Bacteria 196089
22 Ga0065165_1000062 3300005262 Bacteria 178885
23 Ga0065165_1000082 3300005262 Bacteria 158536
24 Ga0070671_100020374 3300005355 Bacteria 5407
25 Ga0070679_100004520 3300005530 Bacteria 12855
26 Ga0075368_10030429 3300006042 Bacteria 2091
27 Ga0075370_10002972 3300006353 Bacteria 7967
28 Ga0075430_100000011 3300006846 Bacteria 99671
29 Ga0105240_10021952 3300009093 Bacteria 8478
30 Ga0111539_10012397 3300009094 Bacteria 10688
31 Ga0105248_10000981 3300009177 Bacteria 31678
32 Ga0209129_1000066 3300025258 Bacteria 226820
33 Ga0209565_1000001 3300025263 Bacteria 2950419
34 Ga0209673_1000001 3300025273 Bacteria 3176258
35 Ga0209673_1000024 3300025273 Bacteria 409632
36 Ga0209130_1000028 3300025284 Bacteria 325668
37 Ga0209130_1000564 3300025284 Bacteria 36607
38 Ga0209675_1000001 3300025291 Bacteria 2950293
39 Ga0209025_1000557 3300025294 Bacteria 69226
40 Ga0209025_1002793 3300025294 Bacteria 17605
41 Ga0209025_1011699 3300025294 Bacteria 5736
42 Ga0209564_1000001 3300025295 Bacteria 3176258
43 Ga0209256_1000002 3300025299 Bacteria 1906740
44 Ga0209256_1000667 3300025299 Bacteria 46381
45 Ga0207426_1000012 3300025302 Bacteria 730942
46 Ga0209051_1000306 3300025303 Bacteria 77135
47 Ga0209257_1000015 3300025304 Bacteria 908141
48 Ga0207711_10024623 3300025941 Bacteria 5046
49 Ga0207689_10051923 3300025942 Bacteria 3379
50 Ga0209968_1000116 3300027526 Bacteria 14650
51 Ga0307515_10000067 3300028794 Bacteria 242978
52 Ga0307514_10003019 3300031649 Bacteria 16628
53 Ga0316576_10009967 3300031727 Bacteria 6152
54 Ga0316578_10074190 3300031728 Bacteria 2017
55 Ga0307416_100036663 3300032002 Bacteria 3764
56 Ga0316574_0007848 3300035398 Bacteria 5883
57 Ga0316574_0012844 3300035398 Bacteria 4801
58 Ga0373931_0041204 3300035691 Bacteria 2426
59 Ga0395900_0058070 3300037418 Bacteria 3983
60 Ga0395900_0228528 3300037418 Bacteria 1872
61 Ga0395898_0004206 3300037466 Bacteria 15775
62 Ga0395898_0012687 3300037466 Bacteria 8704
63 Ga0395905_0305217 3300037471 Bacteria 1479
64 Ga0439453_0009757 3300041408 Bacteria 1569
65 Ga0439449_0001166 3300042007 Bacteria 10307
66 Ga0450911_000073 3300042115 Bacteria 41447
67 Ga0466972_0008750 3300044658 Bacteria 5078
68 Ga0453683_0007645 3300044673 Bacteria 7319
69 Ga0466965_0014999 3300044683 Bacteria 3675
70 Ga0466965_0018585 3300044683 Bacteria 3334
71 Ga0453684_0161240 3300044712 Bacteria 2653
72 Ga0466959_0013485 3300045049 Bacteria 5923
73 Ga0451576_0005682 3300045051 Bacteria 15565
74 Ga0495629_0010115 3300046459 Bacteria 6881
75 Ga0495638_0094784 3300046460 Bacteria 1794
76 Ga0495639_0072265 3300046475 Bacteria 1595
77 Ga0495662_0026784 3300046476 Bacteria 2784
78 Ga0495606_0063924 3300046507 Bacteria 2344
79 Ga0495622_0003965 3300046557 Bacteria 6910
80 Ga0495635_0061838 3300046663 Bacteria 2571
81 Ga0495657_0020197 3300046675 Bacteria 4792
82 Ga0496102_0169121 3300048905 Bacteria 2058
83 Ga0496113_0010726 3300048916 Bacteria 6072
84 Ga0496116_0046404 3300048919 Bacteria 2932
85 Ga0496121_0002600 3300048924 Bacteria 27263
86 Ga0496121_0012014 3300048924 Bacteria 9517
87 Ga0496123_0077805 3300048926 Bacteria 2035
88 Ga0496124_0000622 3300048927 Bacteria 59383
89 Ga0496125_0002992 3300048928 Bacteria 21179
90 Ga0496125_0004956 3300048928 Bacteria 15062
91 Ga0496125_0009479 3300048928 Bacteria 9993
92 Ga0496126_0038878 3300048929 Bacteria 4422
93 Ga0496126_0071751 3300048929 Bacteria 3082
94 Ga0501031_0097409 3300049568 Bacteria 1920
95 Ga0501032_0003313 3300049569 Bacteria 12388
96 Ga0501033_0003150 3300049570 Bacteria 13707
97 Ga0501033_0034632 3300049570 Bacteria 3787
98 Ga0501033_0037015 3300049570 Bacteria 3654
99 Ga0501034_0002441 3300049571 Bacteria 22430
100 Ga0501036_0065049 3300049572 Bacteria 3086
101 Ga0501037_0000253 3300049573 Bacteria 45817
102 Ga0501038_0101624 3300049574 Bacteria 2393
103 Ga0501043_0000100 3300049579 Bacteria 79167
104 Ga0501047_0003070 3300049581 Bacteria 15837
105 Ga0501047_0032207 3300049581 Bacteria 5060
106 Ga0501048_0076107 3300049582 Bacteria 2369
107 Ga0501068_0035289 3300049584 Bacteria 2984
108 Ga0501068_0063153 3300049584 Bacteria 2253
109 Ga0501069_0000020 3300049585 Bacteria 122595
110 Ga0501069_0008202 3300049585 Bacteria 5484
111 Ga0501070_0000193 3300049586 Bacteria 57357
112 Ga0501070_0000595 3300049586 Bacteria 32980
113 Ga0501070_0000836 3300049586 Bacteria 27961
114 Ga0501070_0060277 3300049586 Bacteria 3145
115 Ga0501071_0022544 3300049587 Bacteria 4390
116 Ga0501071_0085466 3300049587 Bacteria 2313
117 Ga0501073_0007382 3300049589 Bacteria 8172
118 Ga0501073_0067489 3300049589 Bacteria 2493
119 Ga0501074_0000063 3300049590 Bacteria 51162
120 Ga0501074_0023858 3300049590 Bacteria 4446
121 Ga0501074_0027632 3300049590 Bacteria 4114
122 Ga0501080_0004199 3300049742 Bacteria 12780
123 Ga0501080_0010754 3300049742 Bacteria 8371
124 Ga0501083_0000205 3300049744 Bacteria 38186
125 Ga0501035_0000070 3300049822 Bacteria 127442
126 Ga0501035_0001992 3300049822 Bacteria 20414
127 Ga0501035_0002240 3300049822 Bacteria 19152
128 Ga0501035_0063244 3300049822 Bacteria 3292
129 Ga0501035_0064433 3300049822 Bacteria 3257
130 Ga0501035_0219854 3300049822 Bacteria 1622
131 Ga0501044_0000037 3300049823 Bacteria 161924
132 Ga0501044_0010011 3300049823 Bacteria 10299
133 Ga0501044_0124921 3300049823 Bacteria 2571
134 nmdc:mga0qj67_20_c1 3300050509 Bacteria 109238
135 nmdc:mga06r32_184891_c1 3300050510 Bacteria 2070
136 nmdc:mga08y16_10645_c1 3300050511 Bacteria 9652
137 Ga0500651_0006738 3300053093 Bacteria 6652
138 Ga0500590_002185 3300053148 Bacteria 8531
139 Ga0500616_0001546 3300053153 Bacteria 21658
140 Ga0500627_0034591 3300053158 Bacteria 2143
141 2511137111 2510917022 Bacteria 6504556
142 2511391496 2511231027 Bacteria 5013807
143 2513924433 2513237146 Bacteria 7166346
144 2585273636 2582581307 Bacteria 6597605
145 2585559810 2585427531 Bacteria 6992870
146 2585900490 2585427608 Bacteria 6544331
147 2585906012 2585427609 Bacteria 6667127
148 2587978873 2585428125 Bacteria 6662905
149 2599419605 2599185170 Bacteria 7295545
150 2692314930 2690316117 Bacteria 6800650
151 2765468327 2765235802 Bacteria 5618596
152 2770197211 2767802442 Bacteria 5747986
153 2776269192 2775506902 Bacteria 6208009
154 2776283669 2775506904 Bacteria 5954060
155 2792581061 2791355082 Bacteria 5973319
156 2838039860 2838035591 Bacteria 7166484
157 2838081039 2838074704 Bacteria 6785777
158 2838664144 2838661181 Bacteria 7385261
159 2839997646 2839993093 Bacteria 5512535
160 2840769745 2840764183 Bacteria 6358399
161 2842694148 2842694124 Bacteria 4063419
162 2842871622 2842871566 Bacteria 4827117
163 2847420014 2847417321 Bacteria 6913799
164 2848994958 2848992105 Bacteria 6810864
165 2848997168 2848992105 Bacteria 6810864
166 2858689253 2858688981 Bacteria 8184122
167 2889794770 2889790730 Bacteria 5689708
168 2889916712 2889914905 Bacteria 5702301
169 2894654454 2894652903 Bacteria 4587256
170 2904581876 2904578770 Bacteria 5302906
171 2919123544 2919119836 Bacteria 5208557
172 2928523582 2928521798 Bacteria 4960112
173 2937844370 2937843397 Bacteria 5256375
174 2954015864 2954011201 Bacteria 4762601
175 643692255 643692032 Bacteria 6891900
176 8049298449 8049293176 Bacteria 6128433
177 rootH1_10034735
178 JGI25152J39213_1006774
179 JGI25159J45721_1000244
180 JGI25159J45721_1000431
181 JGI25159J45721_1007033
182 JGI25151J46595_10004850
183 JGI25151J46595_10027643
184 rootL2_10135729
185 JGI25160J50197_1000012
186 JGI25161J50226_1000002
187 Ga0055526_1000006
188 Ga0055526_1011074
189 Ga0055526_1016348
190 Ga0055537_1000003
191 Ga0055524_1000009
192 Ga0055524_1005987
193 Ga0055534_1000004
194 Ga0055528_1000003
195 Ga0055540_1007867
196 Ga0055531_10000974
197 Ga0055543_1000011
198 Ga0065165_1000062
199 Ga0065165_1000082
200 Ga0070671_100020374
201 Ga0070679_100004520
202 Ga0075368_10030429
203 Ga0075370_10002972
204 Ga0075430_100000011
205 Ga0105240_10021952
206 Ga0111539_10012397
207 Ga0105248_10000981
208 Ga0209129_1000066
209 Ga0209565_1000001
210 Ga0209673_1000001
211 Ga0209673_1000024
212 Ga0209130_1000028
213 Ga0209130_1000564
214 Ga0209675_1000001
215 Ga0209025_1000557
216 Ga0209025_1002793
217 Ga0209025_1011699
218 Ga0209564_1000001
219 Ga0209256_1000002
220 Ga0209256_1000667
221 Ga0207426_1000012
222 Ga0209051_1000306
223 Ga0209257_1000015
224 Ga0207711_10024623
225 Ga0207689_10051923
226 Ga0209968_1000116
227 Ga0307515_10000067
228 Ga0307514_10003019
229 Ga0316576_10009967
230 Ga0316578_10074190
231 Ga0307416_100036663
232 Ga0316574_0007848
233 Ga0316574_0012844
234 Ga0373931_0041204
235 Ga0395900_0058070
236 Ga0395900_0228528
237 Ga0395898_0004206
238 Ga0395898_0012687
239 Ga0395905_0305217
240 Ga0439453_0009757
241 Ga0439449_0001166
242 Ga0450911_000073
243 Ga0466972_0008750
244 Ga0453683_0007645
245 Ga0466965_0014999
246 Ga0466965_0018585
247 Ga0453684_0161240
248 Ga0466959_0013485
249 Ga0451576_0005682
250 Ga0495629_0010115
251 Ga0495638_0094784
252 Ga0495639_0072265
253 Ga0495662_0026784
254 Ga0495606_0063924
255 Ga0495622_0003965
256 Ga0495635_0061838
257 Ga0495657_0020197
258 Ga0496102_0169121
259 Ga0496113_0010726
260 Ga0496116_0046404
261 Ga0496121_0002600
262 Ga0496121_0012014
263 Ga0496123_0077805
264 Ga0496124_0000622
265 Ga0496125_0002992
266 Ga0496125_0004956
267 Ga0496125_0009479
268 Ga0496126_0038878
269 Ga0496126_0071751
270 Ga0501031_0097409
271 Ga0501032_0003313
272 Ga0501033_0003150
273 Ga0501033_0034632
274 Ga0501033_0037015
275 Ga0501034_0002441
276 Ga0501036_0065049
277 Ga0501037_0000253
278 Ga0501038_0101624
279 Ga0501043_0000100
280 Ga0501047_0003070
281 Ga0501047_0032207
282 Ga0501048_0076107
283 Ga0501068_0035289
284 Ga0501068_0063153
285 Ga0501069_0000020
286 Ga0501069_0008202
287 Ga0501070_0000193
288 Ga0501070_0000595
289 Ga0501070_0000836
290 Ga0501070_0060277
291 Ga0501071_0022544
292 Ga0501071_0085466
293 Ga0501073_0007382
294 Ga0501073_0067489
295 Ga0501074_0000063
296 Ga0501074_0023858
297 Ga0501074_0027632
298 Ga0501080_0004199
299 Ga0501080_0010754
300 Ga0501083_0000205
301 Ga0501035_0000070
302 Ga0501035_0001992
303 Ga0501035_0002240
304 Ga0501035_0063244
305 Ga0501035_0064433
306 Ga0501035_0219854
307 Ga0501044_0000037
308 Ga0501044_0010011
309 Ga0501044_0124921
310 nmdc:mga0qj67_20_c1
311 nmdc:mga06r32_184891_c1
312 nmdc:mga08y16_10645_c1
313 Ga0500651_0006738
314 Ga0500590_002185
315 Ga0500616_0001546
316 Ga0500627_0034591
317 2511137111
318 2511391496
319 2513924433
320 2585273636
321 2585559810
322 2585900490
323 2585906012
324 2587978873
325 2599419605
326 2692314930
327 2765468327
328 2770197211
329 2776269192
330 2776283669
331 2792581061
332 2838039860
333 2838081039
334 2838664144
335 2839997646
336 2840769745
337 2842694148
338 2842871622
339 2847420014
340 2848994958
341 2848997168
342 2858689253
343 2889794770
344 2889916712
345 2894654454
346 2904581876
347 2919123544
348 2928523582
349 2937844370
350 2954015864
351 643692255
352 8049298449

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00982

Glyco_transf_20

Glycosyltransferase family 20

88

547

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hxa-assembly1.cif.gz_A-2 crystal structure of an udp-forming alpha, alpha-terhalose-phosphate synthase from burkholderia xenovorans 0.9868 1 455
5tvg-assembly6.cif.gz_H crystal structure of an alpha,alpha-trehalose-phosphate synthase (udp-forming) from burkholderia vietnamiensis 0.9811 2 455
5tvg-assembly4.cif.gz_C crystal structure of an alpha,alpha-trehalose-phosphate synthase (udp-forming) from burkholderia vietnamiensis 0.9786 1 455
5tvg-assembly4.cif.gz_B crystal structure of an alpha,alpha-trehalose-phosphate synthase (udp-forming) from burkholderia vietnamiensis 0.977 1 455
5tvg-assembly5.cif.gz_G crystal structure of an alpha,alpha-trehalose-phosphate synthase (udp-forming) from burkholderia vietnamiensis 0.9767 2 455
ID Description Score Start End Superfamily
5tvgA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9932 234 440 3.40.50.2000
af_Q9Y119_299_464_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9884 259 423 3.40.50.2000
5tvgA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9791 234 440 3.40.50.2000
af_Q9Y119_299_464_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9766 259 423 3.40.50.2000
2wtxC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.971 2 232 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A7Z0LB87-F1-model_v4 deleted 0.9987 70 204
AF-A0A526R7V1-F1-model_v4 Trehalose-6-phosphate synthase 0.9985 315 455 GO:0003825
GO:0005992
AF-A0A2J4UZB8-F1-model_v4 deleted 0.9964 323 455
AF-A0A060BQW5-F1-model_v4 Glyco_transf_20 0.9957 262 419 GO:0003825
GO:0005992
AF-A0A0F9B0X3-F1-model_v4 Uncharacterized protein 0.9953 342 457 GO:0003825
GO:0005992

Map