F269166

General Info

Members Datasets Scaffolds Average Seq Length
176 150 352 986

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2508501039|2508678160
Length 1153
Sequence GRPGAARAQRAARARAQLAQRDGPPAEHTSSSEHESAQWAVADRPPAVAPVGPPTPAPASAPGGGAHPRGSSAEAQLARLGFTDVDRVAATLHRLGFGPPDGLPLTANPVVAELAHAADPDRALAGLDRLIDTLDTQDLTDAPGPTGVAGAARPADPTRSSAELRAALATRPGSRRRLITVLGASLALADHLAAHPADWRILADDEATAAAPTAATHRARLLAAVGADPDDERPRARGDGPDVLDALRVAYRRALLVLAARDLTNTVTVEDATAELADLAAAALDAGLAVARAGLAPTAPPVRLAVIGMGKCGGRELNYVSDVDVVFVAEPATASLPDGPGAATTAATGTADAAEPPEEAALRAATRLAEGLVRACGTRTSEGALFQVDVGLRPEGRDGALVRTLASHRAYYGRWARTWEFQALLKARPVAGDLALGAEFCSMVEPLVWSAASRPGFVADIRAMRRRVEASLSSREASRNIKLGPGGLRDVEFAVQLLQLVHGRTDTKLHARATLHAIDGLARGGYVGRRDATSLADAYRFLRAVEHRLQLRRLQRTHVLPRDPDELRWLGRSLGMLGAEEFAAEHAYTARSVRRLHEQLFYQPLLEAVARLSAEQVRLTPGEAADRLAALGFAYPHRSLKHIEALTAGVSRTATIQRHLLPTMLPAFADAADPDAGLLAYRQVSEALGRVPWYLRLLRDSAGAADRLARVLAASGYVAALMRAAPESVRLLRTEEDLRPVGRGELARTLLAVARRNLDADDAAARARAIRRVELVRVACADLLGLLDATAVGEALAAAATATIEASLLVARRTVTRRLAAGRPAADRFAAVGQPADDLEDQRTCENDLPSHARQASFSGALAGEPARIAVVAMGRLGGGEMSYGSDADVLFVHEPRPGVGARAAGEYATAVVEELVRLLGQPGPDPALRLDLGLRPEGRNGPVTRDLDGYAAYYRRWALGWEAQALLRARPLAGDAELAARFRDLADGFRYPARLPGGAIAEVERLRDRMGAARVPRGADRTLHVKFGPGGLTDVEWTIQILQLRHAHEIPALRTTGTLTALRELATAGLLDGAEAAVLSAAWLSASRIRNAILLARGTPGDLIPRTTPALDRVAGVLGYPLEQVTDVLDDHRRAAAAARHVTDRIFAREQA

Samples

Sample ID Description Type Environment
1 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
4 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
5 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
6 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
7 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
14 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
29 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
35 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
41 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
42 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
45 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
66 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
67 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
70 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
71 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
72 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
73 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
74 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
75 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
76 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
77 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
78 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
79 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
81 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
83 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
84 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
85 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
86 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
88 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
89 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
90 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
91 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
92 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
93 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
94 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
95 2508501039 Frankia saprophytica CN3 Isolate Nodule
96 2506783011 Frankia datiscae Dg1 Isolate Nodule
97 2517572101 Frankia sp. DC12 Isolate Nodule
98 2527291627 Frankia casuarinae Thr Isolate Nodule
99 2527291629 Frankia sp. BMG5.23 Isolate Nodule
100 2546825537 Frankia sp. CcI6 Isolate Rhizoplane
101 2576861822 Frankia sp. CeD Isolate Nodule
102 2579778521 Frankia torreyi CpI1-S Isolate Unclassified
103 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
104 2619618881 Frankia sp. ACN1ag Isolate Unclassified
105 2619619003 Frankia sp. CpI1-P Isolate Nodule
106 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
107 2626541554 Frankia sp. AvcI.1 Isolate Nodule
108 2643221549 Agromyces sp. Root1464 Isolate Unclassified
109 2643221616 Leifsonia sp. Root227 Isolate Unclassified
110 2643221619 Agromyces sp. Root81 Isolate Unclassified
111 2643221649 Leifsonia sp. Root4 Isolate Unclassified
112 2671180195 Frankia sp. CcI49 Isolate Nodule
113 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
114 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
115 2684623036 Frankia sp. CgIM4 Isolate Nodule
116 2687453737 Frankia sp. BMG5.36 Isolate Nodule
117 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
118 2710264753 Frankia sp. KB5 Isolate Nodule
119 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
120 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
121 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
122 2773857922 Frankia sp. CcI49 Isolate Nodule
123 2773857924 Frankia sp. CgIS1 Isolate Nodule
124 2773857933 Frankia sp. BMG5.30 Isolate Nodule
125 2808606372 Agromyces sp. 23-23 Isolate Unclassified
126 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
127 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
128 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
129 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
130 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
131 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
132 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
133 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
134 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
135 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
136 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
137 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
138 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
139 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
140 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
141 2928153084 Leifsonia sp. 563 Isolate Unclassified
142 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
143 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
144 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
145 637000116 Frankia casuarinae CcI3 Isolate Nodule
146 8002775197 Frankia nepalensis CN7 Isolate Nodule
147 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
148 8054913762 Frankia gtarii Agncl-10 Isolate Nodule
149 8054920844 Frankia tisae Agncl-8 Isolate Nodule
150 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 67.61
Metatranscriptomes 0.57
Isolates 31.82

Biome Distribution

Category Percentage (%)
Aerial Root 0.57
Bulb 0
Endosphere 14.77
Nodule 13.07
Rhizoplane 1.7
Rhizosphere 55.11
Stem 0
Stem Tuber 0.57
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25164J39214_1000419 3300002772 Bacteria 24049
2 JGI25165J46597_1000004 3300003214 Bacteria 667510
3 Ga0055539_1000008 3300003752 Bacteria 537665
4 Ga0055533_1000001 3300003756 Bacteria 1863437
5 Ga0055525_1000382 3300003759 Bacteria 28846
6 Ga0055527_1000001 3300003760 Bacteria 850044
7 Ga0055529_1000019 3300003763 Bacteria 332786
8 Ga0070670_100041915 3300005331 Bacteria 3934
9 Ga0070692_10007005 3300005345 Bacteria 4940
10 Ga0070668_100010194 3300005347 Bacteria 6970
11 Ga0070671_100000573 3300005355 Bacteria 26158
12 Ga0070663_100009843 3300005455 Bacteria 5939
13 Ga0068853_100008114 3300005539 Bacteria 8428
14 Ga0070693_100003029 3300005547 Bacteria 7787
15 Ga0068855_100010858 3300005563 Bacteria 10995
16 Ga0068855_100024232 3300005563 Bacteria 7264
17 Ga0068855_100060561 3300005563 Bacteria 4427
18 Ga0068856_100010892 3300005614 Bacteria 8825
19 Ga0070702_100009944 3300005615 Bacteria 4671
20 Ga0068859_100002503 3300005617 Bacteria 18668
21 Ga0068859_100012762 3300005617 Bacteria 8444
22 Ga0068859_100038131 3300005617 Bacteria 4822
23 Ga0068870_10000619 3300005840 Bacteria 13526
24 Ga0068863_100049684 3300005841 Bacteria 3977
25 Ga0068858_100008497 3300005842 Bacteria 9867
26 Ga0068858_100037936 3300005842 Bacteria 4469
27 Ga0068860_100029156 3300005843 Bacteria 5308
28 Ga0068862_100001123 3300005844 Bacteria 25401
29 Ga0097621_100005060 3300006237 Bacteria 9264
30 Ga0097620_100002503 3300006931 Bacteria 18668
31 Ga0097620_100012762 3300006931 Bacteria 8444
32 Ga0097620_100038131 3300006931 Bacteria 4822
33 Ga0105240_10012616 3300009093 Bacteria 11652
34 Ga0105240_10014562 3300009093 Bacteria 10731
35 Ga0111539_10029693 3300009094 Bacteria 6655
36 Ga0105247_10000013 3300009101 Bacteria 287863
37 Ga0105247_10005201 3300009101 Bacteria 8226
38 Ga0105241_10000405 3300009174 Bacteria 32597
39 Ga0105241_10004767 3300009174 Bacteria 9988
40 Ga0105248_10000486 3300009177 Bacteria 45289
41 Ga0105246_10001015 3300011119 Bacteria 16140
42 Ga0157371_10002818 3300013102 Bacteria 16277
43 Ga0157371_10011812 3300013102 Bacteria 6706
44 Ga0157380_10019827 3300014326 Bacteria 5017
45 Ga0157377_10001060 3300014745 Bacteria 11618
46 Ga0206353_12037789 3300020082 Bacteria 10973
47 Ga0209566_100149 3300025225 Bacteria 81626
48 Ga0209674_100001 3300025226 Bacteria 4013750
49 Ga0209672_100006 3300025228 Bacteria 1004497
50 Ga0209563_100001 3300025230 Bacteria 4013775
51 Ga0209563_100464 3300025230 Bacteria 13987
52 Ga0207427_100010 3300025231 Bacteria 648610
53 Ga0209437_100216 3300025233 Bacteria 106353
54 Ga0209677_100001 3300025253 Bacteria 4013787
55 Ga0209677_100608 3300025253 Bacteria 19222
56 Ga0209148_1000015 3300025254 Bacteria 850103
57 Ga0209148_1002318 3300025254 Bacteria 6788
58 Ga0209233_1000001 3300025261 Bacteria 2992747
59 Ga0209455_1000013 3300025272 Bacteria 850103
60 Ga0209455_1003867 3300025272 Bacteria 5111
61 Ga0207710_10000030 3300025900 Bacteria 287870
62 Ga0207710_10004953 3300025900 Bacteria 5770
63 Ga0207643_10000196 3300025908 Bacteria 41902
64 Ga0207705_10013954 3300025909 Bacteria 5793
65 Ga0207654_10000001 3300025911 Bacteria 1816198
66 Ga0207695_10013815 3300025913 Bacteria 9605
67 Ga0207660_10005605 3300025917 Bacteria 8153
68 Ga0207657_10010302 3300025919 Bacteria 9332
69 Ga0207711_10000282 3300025941 Bacteria 54527
70 Ga0207689_10007762 3300025942 Bacteria 9389
71 Ga0207661_10005347 3300025944 Bacteria 9040
72 Ga0207679_10003542 3300025945 Bacteria 9667
73 Ga0207667_10000874 3300025949 Bacteria 38483
74 Ga0207668_10011470 3300025972 Bacteria 5386
75 Ga0207708_10011656 3300026075 Bacteria 6550
76 Ga0207702_10002348 3300026078 Bacteria 18060
77 Ga0207676_10000651 3300026095 Bacteria 27828
78 Ga0207683_10000757 3300026121 Bacteria 29362
79 Ga0268265_10000024 3300028380 Bacteria 266266
80 Ga0395898_0010564 3300037466 Bacteria 9642
81 Ga0466966_0029130 3300044684 Bacteria 3594
82 Ga0466970_0007331 3300044765 Bacteria 5527
83 Ga0466960_0006651 3300044901 Bacteria 4648
84 Ga0466967_0005277 3300045976 Bacteria 8914
85 Ga0496109_0011235 3300048912 Bacteria 7688
86 Ga0496110_0005300 3300048913 Bacteria 10096
87 Ga0496116_0000430 3300048919 Bacteria 58902
88 Ga0496117_0005962 3300048920 Bacteria 12562
89 Ga0496117_0006155 3300048920 Bacteria 12264
90 Ga0496118_0001119 3300048921 Bacteria 41534
91 Ga0496119_0001843 3300048922 Bacteria 24501
92 Ga0496119_0003767 3300048922 Bacteria 15520
93 Ga0496119_0006417 3300048922 Bacteria 10909
94 Ga0496120_0000103 3300048923 Bacteria 141601
95 Ga0496120_0000738 3300048923 Bacteria 47796
96 Ga0496121_0000076 3300048924 Bacteria 239775
97 Ga0496123_0014314 3300048926 Bacteria 6585
98 Ga0496124_0000453 3300048927 Bacteria 71849
99 Ga0501034_0029267 3300049571 Bacteria 5599
100 Ga0501034_0033617 3300049571 Bacteria 5200
101 Ga0501034_0072624 3300049571 Bacteria 3449
102 Ga0501043_0040052 3300049579 Bacteria 3683
103 Ga0501047_0017264 3300049581 Bacteria 6910
104 Ga0501070_0010866 3300049586 Bacteria 7691
105 Ga0501070_0056143 3300049586 Bacteria 3264
106 Ga0501071_0000056 3300049587 Bacteria 38160
107 Ga0501073_0000075 3300049589 Bacteria 61808
108 Ga0501080_0002993 3300049742 Bacteria 14893
109 Ga0501080_0013045 3300049742 Bacteria 7631
110 Ga0501035_0012711 3300049822 Bacteria 7779
111 Ga0501044_0006974 3300049823 Bacteria 12429
112 nmdc:mga08y16_17936_c1 3300050511 Bacteria 7458
113 nmdc:mga08x19_5383_c1 3300050514 Bacteria 7564
114 nmdc:mga0a205_20958_c1 3300050515 Bacteria 6177
115 Ga0500562_001093 3300053108 Bacteria 6657
116 Ga0500559_0000338 3300053136 Bacteria 35118
117 Ga0500559_0002484 3300053136 Bacteria 9499
118 Ga0500616_0001006 3300053153 Bacteria 30305
119 Ga0500616_0001369 3300053153 Bacteria 23653
120 Ga0466962_0011928 3300061719 Bacteria 4181
121 2508678160 2508501039 Bacteria 9978592
122 2506867789 2506783011 Bacteria 5323186
123 2517759657 2517572101 Bacteria 6884336
124 2528205323 2527291627 Bacteria 5309833
125 2528214795 2527291629 Bacteria 5267418
126 2546950934 2546825537 Bacteria 5389291
127 2579749291 2576861822 Bacteria 5004595
128 2579857109 2579778521 Bacteria 7624758
129 2587862658 2585428094 Bacteria 3604039
130 2619858226 2619618881 Bacteria 7521104
131 2620352407 2619619003 Bacteria 7619552
132 2623498461 2622736605 Bacteria 4992138
133 2626633850 2626541554 Bacteria 7741902
134 2643767563 2643221549 Bacteria 4042819
135 2644097136 2643221616 Bacteria 4066575
136 2644110867 2643221619 Bacteria 4158469
137 2644279542 2643221649 Bacteria 3867359
138 2671833750 2671180195 Bacteria 9757215
139 2676205001 2675902999 Bacteria 9438463
140 2686538388 2684623035 Bacteria 8032739
141 2686543159 2684623036 Bacteria 5199090
142 2689956638 2687453737 Bacteria 11203906
143 2689993490 2687453743 Bacteria 8361025
144 2710604894 2710264753 Bacteria 5455564
145 2723642171 2721755702 Bacteria 4373124
146 2753301847 2751185788 Bacteria 4541048
147 2774849576 2773857921 Bacteria 9435764
148 2774851906 2773857922 Bacteria 9757215
149 2774866069 2773857924 Bacteria 5256821
150 2774901872 2773857933 Bacteria 5818019
151 2808902241 2808606372 Bacteria 4649509
152 2844842696 2844841374 Bacteria 3917147
153 2852645591 2852643534 Bacteria 3013378
154 2884765669 2884763398 Bacteria 4091164
155 2895889542 2895880812 Bacteria 11255272
156 2897563262 2897561785 Bacteria 3256946
157 2904433023 2904430863 Bacteria 3486923
158 2904502843 2904501621 Bacteria 3401437
159 2908677931 2908674828 Bacteria 3382763
160 2909075036 2909074476 Bacteria 3436050
161 2919040454 2919039151 Bacteria 3391018
162 2919045960 2919042368 Bacteria 3905917
163 2919058404 2919055335 Bacteria 3875751
164 2919446069 2919443155 Bacteria 4072969
165 2919524787 2919523602 Bacteria 3788128
166 2928108480 2928104781 Bacteria 3877447
167 2928156304 2928153084 Bacteria 4020257
168 2928501715 2928500415 Bacteria 3384541
169 2935411541 2935409751 Bacteria 4179611
170 2984553999 2984551494 Bacteria 3877562
171 637880465 637000116 Bacteria 5433628
172 8002775210 8002775197 Bacteria 10728764
173 8046356278 8046352972 Bacteria 3613806
174 8054919979 8054913762 Bacteria 7713009
175 8054921134 8054920844 Bacteria 7068637
176 8055159812 8055157932 Bacteria 6429399
177 JGI25164J39214_1000419
178 JGI25165J46597_1000004
179 Ga0055539_1000008
180 Ga0055533_1000001
181 Ga0055525_1000382
182 Ga0055527_1000001
183 Ga0055529_1000019
184 Ga0070670_100041915
185 Ga0070692_10007005
186 Ga0070668_100010194
187 Ga0070671_100000573
188 Ga0070663_100009843
189 Ga0068853_100008114
190 Ga0070693_100003029
191 Ga0068855_100010858
192 Ga0068855_100024232
193 Ga0068855_100060561
194 Ga0068856_100010892
195 Ga0070702_100009944
196 Ga0068859_100002503
197 Ga0068859_100012762
198 Ga0068859_100038131
199 Ga0068870_10000619
200 Ga0068863_100049684
201 Ga0068858_100008497
202 Ga0068858_100037936
203 Ga0068860_100029156
204 Ga0068862_100001123
205 Ga0097621_100005060
206 Ga0097620_100002503
207 Ga0097620_100012762
208 Ga0097620_100038131
209 Ga0105240_10012616
210 Ga0105240_10014562
211 Ga0111539_10029693
212 Ga0105247_10000013
213 Ga0105247_10005201
214 Ga0105241_10000405
215 Ga0105241_10004767
216 Ga0105248_10000486
217 Ga0105246_10001015
218 Ga0157371_10002818
219 Ga0157371_10011812
220 Ga0157380_10019827
221 Ga0157377_10001060
222 Ga0206353_12037789
223 Ga0209566_100149
224 Ga0209674_100001
225 Ga0209672_100006
226 Ga0209563_100001
227 Ga0209563_100464
228 Ga0207427_100010
229 Ga0209437_100216
230 Ga0209677_100001
231 Ga0209677_100608
232 Ga0209148_1000015
233 Ga0209148_1002318
234 Ga0209233_1000001
235 Ga0209455_1000013
236 Ga0209455_1003867
237 Ga0207710_10000030
238 Ga0207710_10004953
239 Ga0207643_10000196
240 Ga0207705_10013954
241 Ga0207654_10000001
242 Ga0207695_10013815
243 Ga0207660_10005605
244 Ga0207657_10010302
245 Ga0207711_10000282
246 Ga0207689_10007762
247 Ga0207661_10005347
248 Ga0207679_10003542
249 Ga0207667_10000874
250 Ga0207668_10011470
251 Ga0207708_10011656
252 Ga0207702_10002348
253 Ga0207676_10000651
254 Ga0207683_10000757
255 Ga0268265_10000024
256 Ga0395898_0010564
257 Ga0466966_0029130
258 Ga0466970_0007331
259 Ga0466960_0006651
260 Ga0466967_0005277
261 Ga0496109_0011235
262 Ga0496110_0005300
263 Ga0496116_0000430
264 Ga0496117_0005962
265 Ga0496117_0006155
266 Ga0496118_0001119
267 Ga0496119_0001843
268 Ga0496119_0003767
269 Ga0496119_0006417
270 Ga0496120_0000103
271 Ga0496120_0000738
272 Ga0496121_0000076
273 Ga0496123_0014314
274 Ga0496124_0000453
275 Ga0501034_0029267
276 Ga0501034_0033617
277 Ga0501034_0072624
278 Ga0501043_0040052
279 Ga0501047_0017264
280 Ga0501070_0010866
281 Ga0501070_0056143
282 Ga0501071_0000056
283 Ga0501073_0000075
284 Ga0501080_0002993
285 Ga0501080_0013045
286 Ga0501035_0012711
287 Ga0501044_0006974
288 nmdc:mga08y16_17936_c1
289 nmdc:mga08x19_5383_c1
290 nmdc:mga0a205_20958_c1
291 Ga0500562_001093
292 Ga0500559_0000338
293 Ga0500559_0002484
294 Ga0500616_0001006
295 Ga0500616_0001369
296 Ga0466962_0011928
297 2508678160
298 2506867789
299 2517759657
300 2528205323
301 2528214795
302 2546950934
303 2579749291
304 2579857109
305 2587862658
306 2619858226
307 2620352407
308 2623498461
309 2626633850
310 2643767563
311 2644097136
312 2644110867
313 2644279542
314 2671833750
315 2676205001
316 2686538388
317 2686543159
318 2689956638
319 2689993490
320 2710604894
321 2723642171
322 2753301847
323 2774849576
324 2774851906
325 2774866069
326 2774901872
327 2808902241
328 2844842696
329 2852645591
330 2884765669
331 2895889542
332 2897563262
333 2904433023
334 2904502843
335 2908677931
336 2909075036
337 2919040454
338 2919045960
339 2919058404
340 2919446069
341 2919524787
342 2928108480
343 2928156304
344 2928501715
345 2935411541
346 2984553999
347 637880465
348 8002775210
349 8046356278
350 8054919979
351 8054921134
352 8055159812

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08335

GlnD_UR_UTase

GlnD PII-uridylyltransferase

459

601

0.94

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

848

986

0.93

PF08335

GlnD_UR_UTase

GlnD PII-uridylyltransferase

1004

1148

0.89

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

175

443

0.86

PF03710

GlnE

Glutamate-ammonia ligase adenylyltransferase

705

834

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1v4a-assembly1.cif.gz_A structure of the n-terminal domain of escherichia coli glutamine synthetase adenylyltransferase 0.8688 573 991
1v4a-assembly1.cif.gz_A structure of the n-terminal domain of escherichia coli glutamine synthetase adenylyltransferase 0.8457 573 991
3k7d-assembly3.cif.gz_B c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.7061 493 994
3k7d-assembly3.cif.gz_B c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.701 493 994
3k7d-assembly3.cif.gz_A c-terminal (adenylylation) domain of e.coli glutamine synthetase adenylyltransferase 0.7001 489 992
ID Description Score Start End Superfamily
af_P9WN27_840_994_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9699 839 993 1.20.120.330
af_P9WN27_328_485_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9683 344 493 1.20.120.330
af_P9WN27_840_994_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9638 839 993 1.20.120.330
af_P9WN27_598_833_3.30.460.10 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2;Beta Polymerase, domain 2 0.9182 607 832 3.30.460.10
af_P9WN27_328_485_1.20.120.330 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Nucleotidyltransferases 0.9145 344 493 1.20.120.330
ID Description Score Start End GO Terms
AF-A0A6J6D6B3-F1-model_v4 Unannotated protein 0.9872 862 992 GO:0000820
GO:0005829
GO:0008882
AF-A0A522B744-F1-model_v4 Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 0.9851 800 993 GO:0000820
GO:0005829
GO:0008882
AF-J0NCK4-F1-model_v4 [glutamate--ammonia-ligase] adenylyltransferase-like protein 0.9801 278 463 GO:0000820
GO:0005524
GO:0005829
GO:0008882
GO:0016874
AF-U2RRA1-F1-model_v4 Uncharacterized protein 0.9797 1 197
AF-A0A6G3WJG0-F1-model_v4 Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 0.9774 771 993 GO:0000820
GO:0005524
GO:0005829
GO:0008882

Map