F270705

General Info

Members Datasets Scaffolds Average Seq Length
177 115 354 190

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0352474|Ga0451576_0352474_862_1509
Length 215
Sequence LIVKSTISIGFLKFKPIFFAQKEINFMKNDTSKIPQAGNLLISEPFLQDENFVRSVILLCEHNSEGSFGLVLNKPSILHLSELVEELSFLESEVFVGGPVEQNTLHFIYFGEKKLEGSLPIGEDLWWGGDFESLVEKLKLGTMNADSVRFFIGYSGWGAGQLSDELSENTWIICESKIDSEVLQNTPDELWRVLLKNMGGEFKVIANYPLDPRLN

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
44 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
47 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
48 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
49 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
50 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
51 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
52 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
53 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
54 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
55 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
56 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
57 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
58 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
59 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
60 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
61 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
62 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
66 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
67 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
68 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
69 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
70 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
71 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
72 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
73 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
74 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
75 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
76 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
77 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
78 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
79 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
82 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
83 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
84 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
85 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
86 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
87 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
88 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
89 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
90 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
91 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
92 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
93 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
94 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
95 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
96 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
97 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
98 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
99 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
100 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
101 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
102 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
103 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
104 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
105 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
106 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
107 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
108 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
109 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
110 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
111 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
112 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
113 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
114 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
115 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.31
Metatranscriptomes 0
Isolates 1.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.43
Nodule 0
Rhizoplane 1.13
Rhizosphere 71.75
Stem 0
Stem Tuber 0
Unclassified 15.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_0352474 3300045051 Bacteria 1541
2 rootH1_10085231 3300003316 Bacteria 3711
3 rootH1_10146785 3300003316 Unclassified 2726
4 rootH2_10092800 3300003320 Bacteria 1605
5 rootH2_10116895 3300003320 Bacteria 3054
6 rootH2_10289015 3300003320 Bacteria 1659
7 rootL2_10011797 3300003322 Bacteria 7983
8 rootL2_10088947 3300003322 Bacteria 7123
9 rootL2_10093288 3300003322 Bacteria 5735
10 rootL2_10286405 3300003322 Unclassified 1614
11 rootH1_10004044 3300003323 Bacteria 10210
12 rootH1_10041971 3300003323 Bacteria 1706
13 rootH1_10131460 3300003323 Bacteria 5312
14 rootH1_10166634 3300003323 Bacteria 5499
15 rootH1_10224286 3300003323 Unclassified 1453
16 Ga0055531_10000295 3300003794 Bacteria 49801
17 Ga0065165_1001677 3300005262 Bacteria 22412
18 Ga0065712_10077935 3300005290 Bacteria 3422
19 Ga0070689_100006579 3300005340 Bacteria 8062
20 Ga0070689_100171822 3300005340 Unclassified 1756
21 Ga0070687_100269835 3300005343 Bacteria 1066
22 Ga0070674_100806082 3300005356 Bacteria 811
23 Ga0070659_100076368 3300005366 Bacteria 2671
24 Ga0070685_10286153 3300005466 Bacteria 1105
25 Ga0070699_100577758 3300005518 Bacteria 1024
26 Ga0070665_100246945 3300005548 Bacteria 1785
27 Ga0068855_100493033 3300005563 Bacteria 1332
28 Ga0068856_100047618 3300005614 Unclassified 4224
29 Ga0068859_100130710 3300005617 Bacteria 2582
30 Ga0068859_100321536 3300005617 Unclassified 1641
31 Ga0068863_100054542 3300005841 Bacteria 3787
32 Ga0081455_10059712 3300005937 Unclassified 3218
33 Ga0081538_10000023 3300005981 Bacteria 131101
34 Ga0097621_100146017 3300006237 Bacteria 2025
35 Ga0097621_100578507 3300006237 Bacteria 1025
36 Ga0075428_100003663 3300006844 Bacteria 16847
37 Ga0075428_100010435 3300006844 Bacteria 10316
38 Ga0075428_100036856 3300006844 Bacteria 5385
39 Ga0075428_100985013 3300006844 Bacteria 893
40 Ga0075434_100732314 3300006871 Bacteria 1006
41 Ga0075429_100264487 3300006880 Bacteria 1506
42 Ga0075436_100079018 3300006914 Bacteria 2279
43 Ga0097620_100130709 3300006931 Bacteria 2582
44 Ga0097620_100321530 3300006931 Unclassified 1641
45 Ga0075435_100345987 3300007076 Bacteria 1274
46 Ga0111539_10009709 3300009094 Bacteria 12145
47 Ga0111539_10023875 3300009094 Bacteria 7512
48 Ga0111539_10377224 3300009094 Unclassified 1651
49 Ga0111539_10396152 3300009094 Bacteria 1608
50 Ga0111539_10423832 3300009094 Bacteria 1550
51 Ga0111539_10527321 3300009094 Bacteria 1376
52 Ga0111539_10888518 3300009094 Bacteria 1036
53 Ga0114129_11592391 3300009147 Unclassified 800
54 Ga0105248_10852165 3300009177 Bacteria 1029
55 Ga0105248_11231008 3300009177 Bacteria 846
56 Ga0157370_10042224 3300013104 Bacteria 4396
57 Ga0157380_10000443 3300014326 Bacteria 25341
58 Ga0157380_10117274 3300014326 Bacteria 2248
59 Ga0157380_10429919 3300014326 Bacteria 1262
60 Ga0157380_10516647 3300014326 Bacteria 1164
61 Ga0157376_10374287 3300014969 Bacteria 1370
62 Ga0209050_1004335 3300025298 Bacteria 9674
63 Ga0209050_1022604 3300025298 Bacteria 2248
64 Ga0209257_1000006 3300025304 Bacteria 1570111
65 Ga0207682_10131765 3300025893 Bacteria 1116
66 Ga0207681_10646879 3300025923 Bacteria 876
67 Ga0207711_10904639 3300025941 Bacteria 820
68 Ga0207667_10373092 3300025949 Bacteria 1454
69 Ga0207667_11267271 3300025949 Unclassified 715
70 Ga0207641_10019131 3300026088 Bacteria 5617
71 Ga0207641_10341085 3300026088 Bacteria 1426
72 Ga0207675_101619799 3300026118 Bacteria 668
73 Ga0207428_10068166 3300027907 Unclassified 2799
74 Ga0268265_10054088 3300028380 Bacteria 3044
75 Ga0268264_11177445 3300028381 Bacteria 776
76 Ga0307515_10158061 3300028794 Unclassified 2328
77 Ga0307513_10111585 3300031456 Bacteria 2727
78 Ga0307509_10029534 3300031507 Bacteria 6083
79 Ga0307408_100061752 3300031548 Bacteria 2736
80 Ga0316576_10105064 3300031727 Bacteria 2114
81 Ga0316578_10008937 3300031728 Bacteria 5124
82 Ga0307516_10270712 3300031730 Bacteria 1385
83 Ga0307405_10405604 3300031731 Bacteria 1068
84 Ga0316577_10040325 3300031733 Bacteria 2612
85 Ga0307406_10076280 3300031901 Bacteria 2214
86 Ga0307409_100680092 3300031995 Bacteria 1026
87 Ga0307416_100015677 3300032002 Bacteria 5242
88 Ga0307414_10006973 3300032004 Bacteria 6332
89 Ga0307411_10578649 3300032005 Bacteria 962
90 Ga0307415_100108977 3300032126 Bacteria 2050
91 Ga0316585_10038723 3300032137 Unclassified 1515
92 Ga0373931_0099590 3300035691 Bacteria 1633
93 Ga0373935_0278116 3300035692 Bacteria 1178
94 Ga0373927_0048323 3300035695 Bacteria 2752
95 Ga0316582_0045706 3300036647 Bacteria 2758
96 Ga0316582_0450002 3300036647 Unclassified 888
97 Ga0316584_0001440 3300036712 Bacteria 14261
98 Ga0436364_0848697 3300037853 Bacteria 2563
99 Ga0400483_004979 3300039062 Bacteria 20861
100 Ga0400483_157142 3300039062 Bacteria 19343
101 Ga0400483_241479 3300039062 Bacteria 2262
102 Ga0451789_0830902 3300041443 Bacteria 1190
103 Ga0451807_0987196 3300041486 Unclassified 1174
104 Ga0451837_0204662 3300041494 Bacteria 2757
105 Ga0451849_1546348 3300041505 Unclassified 735
106 Ga0439435_0159278 3300042436 Unclassified 728
107 Ga0451577_0007369 3300042876 Bacteria 10800
108 Ga0451577_0021200 3300042876 Bacteria 5949
109 Ga0451577_0027479 3300042876 Bacteria 5151
110 Ga0451577_0068581 3300042876 Bacteria 3163
111 Ga0451577_0567859 3300042876 Bacteria 1030
112 Ga0451577_0730578 3300042876 Unclassified 896
113 Ga0466969_0135598 3300044656 Bacteria 1140
114 Ga0453683_0001818 3300044673 Bacteria 17607
115 Ga0453684_0004286 3300044712 Bacteria 30426
116 Ga0453684_0023300 3300044712 Bacteria 9131
117 Ga0453684_0121500 3300044712 Bacteria 3152
118 Ga0453684_0130502 3300044712 Unclassified 3016
119 Ga0453684_0252624 3300044712 Unclassified 2024
120 Ga0453684_0371916 3300044712 Bacteria 1606
121 Ga0453684_0753235 3300044712 Bacteria 1054
122 Ga0453684_0963008 3300044712 Unclassified 910
123 Ga0466968_0145425 3300044735 Bacteria 1087
124 Ga0466957_0430170 3300044842 Bacteria 907
125 Ga0451576_0020786 3300045051 Bacteria 7145
126 Ga0451576_0031405 3300045051 Bacteria 5662
127 Ga0451576_0146836 3300045051 Bacteria 2459
128 Ga0451576_0244134 3300045051 Bacteria 1876
129 Ga0451576_0700659 3300045051 Bacteria 1064
130 Ga0451576_1141188 3300045051 Bacteria 815
131 Ga0451576_1821099 3300045051 Unclassified 629
132 Ga0466967_0300197 3300045976 Bacteria 1545
133 Ga0495638_0000020 3300046460 Bacteria 372434
134 Ga0495582_0263736 3300046473 Bacteria 988
135 Ga0495583_0082717 3300046506 Bacteria 1393
136 Ga0495608_0008438 3300046511 Bacteria 7218
137 Ga0495586_0174275 3300046535 Bacteria 1216
138 Ga0495667_0030392 3300046559 Bacteria 3630
139 Ga0495676_0093174 3300047321 Unclassified 2247
140 Ga0495602_0034926 3300048088 Bacteria 4695
141 Ga0501300_008455 3300049523 Bacteria 1508
142 Ga0501236_011840 3300049670 Bacteria 1165
143 Ga0501257_007507 3300049686 Bacteria 2437
144 Ga0501259_010641 3300049688 Bacteria 1506
145 Ga0501261_037404 3300049690 Bacteria 754
146 Ga0501221_064862 3300049704 Bacteria 851
147 Ga0501264_000726 3300049761 Bacteria 4415
148 nmdc:mga09592_288365_c1 3300050508 Bacteria 1423
149 nmdc:mga0qj67_67983_c1 3300050509 Unclassified 2839
150 nmdc:mga08y16_122428_c1 3300050511 Bacteria 2706
151 nmdc:mga08y16_28509_c1 3300050511 Bacteria 5886
152 nmdc:mga08y16_29076_c1 3300050511 Bacteria 5825
153 nmdc:mga08y16_434631_c1 3300050511 Bacteria 1340
154 nmdc:mga08y16_728540_c1 3300050511 Bacteria 989
155 nmdc:mga0n895_415376_c1 3300050512 Bacteria 1360
156 nmdc:mga0rr50_377308_c1 3300050513 Bacteria 1195
157 Ga0495619_0946648 3300053085 Unclassified 578
158 Ga0500578_0209398 3300053086 Bacteria 1190
159 Ga0500644_0031220 3300053088 Bacteria 1692
160 Ga0500583_0046935 3300053092 Bacteria 1989
161 Ga0500651_0117834 3300053093 Bacteria 1615
162 Ga0500652_071680 3300053131 Bacteria 1436
163 Ga0500655_003091 3300053133 Bacteria 3020
164 Ga0500655_020038 3300053133 Unclassified 1248
165 Ga0500588_0028404 3300053146 Bacteria 1586
166 Ga0500604_0000207 3300053151 Bacteria 16825
167 Ga0500616_0000007 3300053153 Bacteria 836875
168 Ga0500616_0006075 3300053153 Bacteria 8010
169 Ga0500616_0019175 3300053153 Bacteria 3857
170 Ga0500622_0000031 3300053156 Bacteria 207165
171 Ga0500622_0000039 3300053156 Bacteria 170859
172 Ga0500622_0107398 3300053156 Bacteria 1367
173 Ga0500622_0170808 3300053156 Bacteria 1012
174 Ga0500645_098121 3300053730 Bacteria 828
175 2740032853 2739367866 Bacteria 4215900
176 2884635126 2884634485 Bacteria 3928637
177 2919695229 2919692658 Bacteria 5943958
178 Ga0451576_0352474
179 rootH1_10085231
180 rootH1_10146785
181 rootH2_10092800
182 rootH2_10116895
183 rootH2_10289015
184 rootL2_10011797
185 rootL2_10088947
186 rootL2_10093288
187 rootL2_10286405
188 rootH1_10004044
189 rootH1_10041971
190 rootH1_10131460
191 rootH1_10166634
192 rootH1_10224286
193 Ga0055531_10000295
194 Ga0065165_1001677
195 Ga0065712_10077935
196 Ga0070689_100006579
197 Ga0070689_100171822
198 Ga0070687_100269835
199 Ga0070674_100806082
200 Ga0070659_100076368
201 Ga0070685_10286153
202 Ga0070699_100577758
203 Ga0070665_100246945
204 Ga0068855_100493033
205 Ga0068856_100047618
206 Ga0068859_100130710
207 Ga0068859_100321536
208 Ga0068863_100054542
209 Ga0081455_10059712
210 Ga0081538_10000023
211 Ga0097621_100146017
212 Ga0097621_100578507
213 Ga0075428_100003663
214 Ga0075428_100010435
215 Ga0075428_100036856
216 Ga0075428_100985013
217 Ga0075434_100732314
218 Ga0075429_100264487
219 Ga0075436_100079018
220 Ga0097620_100130709
221 Ga0097620_100321530
222 Ga0075435_100345987
223 Ga0111539_10009709
224 Ga0111539_10023875
225 Ga0111539_10377224
226 Ga0111539_10396152
227 Ga0111539_10423832
228 Ga0111539_10527321
229 Ga0111539_10888518
230 Ga0114129_11592391
231 Ga0105248_10852165
232 Ga0105248_11231008
233 Ga0157370_10042224
234 Ga0157380_10000443
235 Ga0157380_10117274
236 Ga0157380_10429919
237 Ga0157380_10516647
238 Ga0157376_10374287
239 Ga0209050_1004335
240 Ga0209050_1022604
241 Ga0209257_1000006
242 Ga0207682_10131765
243 Ga0207681_10646879
244 Ga0207711_10904639
245 Ga0207667_10373092
246 Ga0207667_11267271
247 Ga0207641_10019131
248 Ga0207641_10341085
249 Ga0207675_101619799
250 Ga0207428_10068166
251 Ga0268265_10054088
252 Ga0268264_11177445
253 Ga0307515_10158061
254 Ga0307513_10111585
255 Ga0307509_10029534
256 Ga0307408_100061752
257 Ga0316576_10105064
258 Ga0316578_10008937
259 Ga0307516_10270712
260 Ga0307405_10405604
261 Ga0316577_10040325
262 Ga0307406_10076280
263 Ga0307409_100680092
264 Ga0307416_100015677
265 Ga0307414_10006973
266 Ga0307411_10578649
267 Ga0307415_100108977
268 Ga0316585_10038723
269 Ga0373931_0099590
270 Ga0373935_0278116
271 Ga0373927_0048323
272 Ga0316582_0045706
273 Ga0316582_0450002
274 Ga0316584_0001440
275 Ga0436364_0848697
276 Ga0400483_004979
277 Ga0400483_157142
278 Ga0400483_241479
279 Ga0451789_0830902
280 Ga0451807_0987196
281 Ga0451837_0204662
282 Ga0451849_1546348
283 Ga0439435_0159278
284 Ga0451577_0007369
285 Ga0451577_0021200
286 Ga0451577_0027479
287 Ga0451577_0068581
288 Ga0451577_0567859
289 Ga0451577_0730578
290 Ga0466969_0135598
291 Ga0453683_0001818
292 Ga0453684_0004286
293 Ga0453684_0023300
294 Ga0453684_0121500
295 Ga0453684_0130502
296 Ga0453684_0252624
297 Ga0453684_0371916
298 Ga0453684_0753235
299 Ga0453684_0963008
300 Ga0466968_0145425
301 Ga0466957_0430170
302 Ga0451576_0020786
303 Ga0451576_0031405
304 Ga0451576_0146836
305 Ga0451576_0244134
306 Ga0451576_0700659
307 Ga0451576_1141188
308 Ga0451576_1821099
309 Ga0466967_0300197
310 Ga0495638_0000020
311 Ga0495582_0263736
312 Ga0495583_0082717
313 Ga0495608_0008438
314 Ga0495586_0174275
315 Ga0495667_0030392
316 Ga0495676_0093174
317 Ga0495602_0034926
318 Ga0501300_008455
319 Ga0501236_011840
320 Ga0501257_007507
321 Ga0501259_010641
322 Ga0501261_037404
323 Ga0501221_064862
324 Ga0501264_000726
325 nmdc:mga09592_288365_c1
326 nmdc:mga0qj67_67983_c1
327 nmdc:mga08y16_122428_c1
328 nmdc:mga08y16_28509_c1
329 nmdc:mga08y16_29076_c1
330 nmdc:mga08y16_434631_c1
331 nmdc:mga08y16_728540_c1
332 nmdc:mga0n895_415376_c1
333 nmdc:mga0rr50_377308_c1
334 Ga0495619_0946648
335 Ga0500578_0209398
336 Ga0500644_0031220
337 Ga0500583_0046935
338 Ga0500651_0117834
339 Ga0500652_071680
340 Ga0500655_003091
341 Ga0500655_020038
342 Ga0500588_0028404
343 Ga0500604_0000207
344 Ga0500616_0000007
345 Ga0500616_0006075
346 Ga0500616_0019175
347 Ga0500622_0000031
348 Ga0500622_0000039
349 Ga0500622_0107398
350 Ga0500622_0170808
351 Ga0500645_098121
352 2740032853
353 2884635126
354 2919695229

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02622

DUF179

Uncharacterized ACR, COG1678

45

199

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ew0-assembly1.cif.gz_A x-ray crystal structure of protein q6ff54 from acinetobacter sp. adp1. northeast structural genomics consortium target asr1. 0.8763 13 176
2hrx-assembly1.cif.gz_A x-ray crystal structure of protein dip2367 from corynebacterium diphtheriae. northeast structural genomics consortium target cdr13. 0.8531 11 185
2haf-assembly1.cif.gz_A crystal structure of a putative translation repressor from vibrio cholerae 0.8341 6 177
2ew0-assembly1.cif.gz_A x-ray crystal structure of protein q6ff54 from acinetobacter sp. adp1. northeast structural genomics consortium target asr1. 0.8195 13 176
2hrx-assembly1.cif.gz_A x-ray crystal structure of protein dip2367 from corynebacterium diphtheriae. northeast structural genomics consortium target cdr13. 0.7822 11 185
ID Description Score Start End Superfamily
af_P0A8W5_4_171_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.8849 16 171 3.40.50.1000
af_P9WFK5_10_193_3.40.1740.10 Alpha Beta;3-Layer(aba) Sandwich;VC0467-like;VC0467-like 0.8638 12 182 3.40.1740.10
af_A0A1D6G7F1_154_345_3.40.1740.10 Alpha Beta;3-Layer(aba) Sandwich;VC0467-like;VC0467-like 0.8592 14 188 3.40.1740.10
2ew0A00 Alpha Beta;3-Layer(aba) Sandwich;VC0467-like;VC0467-like 0.8545 13 176 3.40.1740.10
af_Q54HU6_278_477_3.40.1740.10 Alpha Beta;3-Layer(aba) Sandwich;VC0467-like;VC0467-like 0.8397 16 171 3.40.1740.10
ID Description Score Start End GO Terms
AF-A0A136LN18-F1-model_v4 Putative transcriptional regulator 0.9819 2 129 GO:0005829
AF-A0A7L9BJ74-F1-model_v4 UPF0301 protein HRU69_11615 0.9784 2 192 GO:0005829
AF-A0A081SHF0-F1-model_v4 UPF0301 protein HY22_05645 0.9779 11 192 GO:0005829
AF-A0A355UDC6-F1-model_v4 YqgE/AlgH family protein 0.9744 15 192
AF-A0A7L9BJ74-F1-model_v4 UPF0301 protein HRU69_11615 0.9734 2 192 GO:0005829

Map