F272015

General Info

Members Datasets Scaffolds Average Seq Length
178 117 356 675

Family's Representative Sequence

Representative Sequence 3300013105|Ga0157369_10018289|Ga0157369_100182895
Length 718
Sequence MSEVLAAPPARRVGLWLALALALGSAIAPPSWAQTGDGSQARAATGDSQHQVTAPASTRASESRPHGAPQAGTASGDFWVEPPTLVSIGFEWRIAGDDNRNASVAVTYRKKGETAWRQALPLLRLQREAVLGGVPRDGAGEHYNHYVAPNMFAGSILNLEPDTEYECRLVLSDPDGVKGTREKTVVVRTRGEPQPAAGGAVYHVYPFDYKGPRQQPAFTGLLAAYFMGSDQSDHSRALPPRVKPGDTILVHAGLYRDNRFVYSGFDRTIAAYGTPFDGTYYLTESGTPDKPIVIRSAGDGEVIFDGDGCDNLFNLMAGNYTYFEGITVRNTQVAFKLGIKSIAGSSGFTLKHSRVYDVGRVIEAGWSGSKNFYIADNVFIGRHDPLKLQSWFTPEVWAKFPGYPALIRSEYAVKVYGQGHVVARNYVANWHDGIDVDTYGDPDGTPNELRDRIPVSIDIYENDIYNTDDNCIESDGGAHNIRVFRNRCFNATGGALSAQPIFGGPVYFYRNLVYGQTTGGYLKLVDTPAGVLIQTRYFGPASNVHFRNNLILADGWGGQVLALRTYTSYSTSDYNGIRANPDAQFPFEWDAPAAGIVADYRTTAQTRQFKSLAEFVAAVGADKHSVPVDFNVFVDVKIPDKSDPQRLYNPEDFDFRLKPGSAAIDAGTRLPTITDGFTGKAPDLGAYELGQPVPKYGPRTQPPGAPGPDAPRSIRGPT

Samples

Sample ID Description Type Environment
1 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
2 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
46 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
47 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
48 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
71 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
74 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
75 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
76 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
79 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
80 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
81 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
82 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
83 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
85 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
89 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
90 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
91 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
92 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
95 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
96 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
97 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
98 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
99 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
100 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
101 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
102 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
103 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
108 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
109 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
112 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
113 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
114 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
115 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
116 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
117 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.49
Nodule 0
Rhizoplane 2.25
Rhizosphere 90.45
Stem 0
Stem Tuber 0
Unclassified 7.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157369_10018289 3300013105 Bacteria 7860
2 JGI25165J46597_1000036 3300003214 Bacteria 286380
3 Ga0070683_100014237 3300005329 Bacteria 6952
4 Ga0070680_100005303 3300005336 Bacteria 9752
5 Ga0068868_100064032 3300005338 Bacteria 2918
6 Ga0070675_100009385 3300005354 Bacteria 7612
7 Ga0070671_100027568 3300005355 Bacteria 4676
8 Ga0070714_100000985 3300005435 Bacteria 20358
9 Ga0070713_100011825 3300005436 Bacteria 6377
10 Ga0070713_100022132 3300005436 Unclassified 4907
11 Ga0070713_100048576 3300005436 Bacteria 3495
12 Ga0070713_100054850 3300005436 Unclassified 3309
13 Ga0070711_100006365 3300005439 Bacteria 7115
14 Ga0070678_100018219 3300005456 Bacteria 4548
15 Ga0070681_10000460 3300005458 Bacteria 33209
16 Ga0070681_10000668 3300005458 Bacteria 28378
17 Ga0070679_100000666 3300005530 Bacteria 29261
18 Ga0070679_100034478 3300005530 Bacteria 5016
19 Ga0070684_100042620 3300005535 Unclassified 3919
20 Ga0070665_100000328 3300005548 Bacteria 73231
21 Ga0070665_100001250 3300005548 Bacteria 30697
22 Ga0068855_100001590 3300005563 Bacteria 28523
23 Ga0068855_100004778 3300005563 Bacteria 16544
24 Ga0068855_100049153 3300005563 Bacteria 4975
25 Ga0068855_100192095 3300005563 Unclassified 2302
26 Ga0068859_100121730 3300005617 Bacteria 2676
27 Ga0081539_10027994 3300005985 Bacteria 3553
28 Ga0070717_10040423 3300006028 Bacteria 3798
29 Ga0097621_100005090 3300006237 Bacteria 9233
30 Ga0097621_100019696 3300006237 Bacteria 5186
31 Ga0097621_100064187 3300006237 Bacteria 3019
32 Ga0097621_100089509 3300006237 Bacteria 2574
33 Ga0068871_100007185 3300006358 Bacteria 7943
34 Ga0075428_100002762 3300006844 Bacteria 19113
35 Ga0075428_100140526 3300006844 Bacteria 2626
36 Ga0075430_100013246 3300006846 Bacteria 7027
37 Ga0075431_100006087 3300006847 Bacteria 11960
38 Ga0068865_100031919 3300006881 Bacteria 3515
39 Ga0097620_100121734 3300006931 Bacteria 2676
40 Ga0105240_10009690 3300009093 Bacteria 13606
41 Ga0105240_10011404 3300009093 Bacteria 12381
42 Ga0105240_10051805 3300009093 Bacteria 5163
43 Ga0105240_10126580 3300009093 Bacteria 3069
44 Ga0105240_10146228 3300009093 Bacteria 2820
45 Ga0111539_10074483 3300009094 Bacteria 4000
46 Ga0105245_10004134 3300009098 Bacteria 12892
47 Ga0105245_10005259 3300009098 Bacteria 11368
48 Ga0105245_10006654 3300009098 Bacteria 10143
49 Ga0105245_10038941 3300009098 Unclassified 4231
50 Ga0105245_10045543 3300009098 Bacteria 3918
51 Ga0105243_10004027 3300009148 Bacteria 11696
52 Ga0105243_10071268 3300009148 Unclassified 2809
53 Ga0105242_10026263 3300009176 Bacteria 4615
54 Ga0105248_10003842 3300009177 Bacteria 16642
55 Ga0105248_10010906 3300009177 Bacteria 10027
56 Ga0105248_10072645 3300009177 Bacteria 3866
57 Ga0105237_10013608 3300009545 Bacteria 8525
58 Ga0105237_10106831 3300009545 Bacteria 2791
59 Ga0105238_10005358 3300009551 Bacteria 12676
60 Ga0105246_10010764 3300011119 Bacteria 5669
61 Ga0105246_10064023 3300011119 Bacteria 2567
62 Ga0157370_10000667 3300013104 Bacteria 42733
63 Ga0157370_10000919 3300013104 Bacteria 37363
64 Ga0157370_10031507 3300013104 Bacteria 5185
65 Ga0157370_10053963 3300013104 Unclassified 3831
66 Ga0157369_10001646 3300013105 Bacteria 27266
67 Ga0157369_10003017 3300013105 Bacteria 20123
68 Ga0157369_10043270 3300013105 Bacteria 4910
69 Ga0157369_10045007 3300013105 Unclassified 4802
70 Ga0157369_10064874 3300013105 Unclassified 3932
71 Ga0157378_10007621 3300013297 Bacteria 9449
72 Ga0163162_10060735 3300013306 Bacteria 3816
73 Ga0163162_10090946 3300013306 Unclassified 3134
74 Ga0157372_10012703 3300013307 Bacteria 8970
75 Ga0157375_10031979 3300013308 Bacteria 4985
76 Ga0163163_10001500 3300014325 Bacteria 19760
77 Ga0157379_10002566 3300014968 Bacteria 15242
78 Ga0157376_10071690 3300014969 Bacteria 2945
79 Ga0163161_10024778 3300017792 Bacteria 4241
80 Ga0213875_10008403 3300021388 Bacteria 5292
81 Ga0213875_10029938 3300021388 Bacteria 2580
82 Ga0207427_103802 3300025231 Bacteria 2900
83 Ga0209233_1000015 3300025261 Bacteria 980563
84 Ga0207680_10023435 3300025903 Bacteria 3371
85 Ga0207707_10000107 3300025912 Bacteria 82899
86 Ga0207707_10023120 3300025912 Bacteria 5439
87 Ga0207707_10069244 3300025912 Unclassified 3075
88 Ga0207695_10002755 3300025913 Bacteria 25633
89 Ga0207695_10003371 3300025913 Bacteria 22575
90 Ga0207695_10004996 3300025913 Bacteria 17830
91 Ga0207695_10067272 3300025913 Bacteria 3675
92 Ga0207660_10002601 3300025917 Bacteria 11844
93 Ga0207652_10000738 3300025921 Bacteria 31584
94 Ga0207652_10039126 3300025921 Bacteria 4024
95 Ga0207694_10003158 3300025924 Bacteria 13161
96 Ga0207650_10021606 3300025925 Bacteria 4547
97 Ga0207687_10003975 3300025927 Bacteria 9907
98 Ga0207687_10006713 3300025927 Bacteria 7592
99 Ga0207687_10012836 3300025927 Bacteria 5475
100 Ga0207700_10015804 3300025928 Bacteria 4992
101 Ga0207700_10031212 3300025928 Bacteria 3782
102 Ga0207700_10097615 3300025928 Bacteria 2335
103 Ga0207644_10006543 3300025931 Bacteria 7593
104 Ga0207709_10005012 3300025935 Bacteria 7565
105 Ga0207691_10042685 3300025940 Bacteria 4179
106 Ga0207711_10008778 3300025941 Bacteria 8452
107 Ga0207711_10011368 3300025941 Bacteria 7398
108 Ga0207661_10068727 3300025944 Unclassified 2886
109 Ga0207667_10001499 3300025949 Bacteria 29319
110 Ga0207651_10013550 3300025960 Unclassified 4671
111 Ga0207703_10049091 3300026035 Bacteria 3410
112 Ga0207702_10042311 3300026078 Bacteria 3821
113 Ga0207648_10038545 3300026089 Bacteria 4205
114 Ga0207676_10167814 3300026095 Bacteria 1909
115 Ga0207683_10012819 3300026121 Bacteria 7156
116 Ga0207683_10023426 3300026121 Bacteria 5311
117 Ga0268266_10000234 3300028379 Bacteria 94817
118 Ga0268266_10030263 3300028379 Bacteria 4601
119 Ga0265338_10009466 3300028800 Bacteria 11610
120 Ga0265338_10070651 3300028800 Bacteria 2992
121 Ga0265340_10003366 3300031247 Bacteria 9035
122 Ga0265339_10018741 3300031249 Bacteria 4076
123 Ga0265331_10005740 3300031250 Bacteria 7436
124 Ga0265327_10002223 3300031251 Bacteria 21119
125 Ga0265313_10007494 3300031595 Bacteria 7437
126 Ga0265314_10000674 3300031711 Bacteria 41721
127 Ga0265314_10042513 3300031711 Bacteria 3241
128 Ga0307416_100004830 3300032002 Bacteria 8197
129 Ga0307415_100037031 3300032126 Bacteria 3203
130 Ga0373956_0005975 3300035119 Bacteria 4869
131 Ga0373943_0003272 3300035170 Bacteria 7365
132 Ga0373955_0002556 3300035172 Bacteria 7965
133 Ga0373924_0002248 3300035410 Bacteria 6484
134 Ga0373935_0037780 3300035692 Bacteria 3022
135 Ga0373935_0058600 3300035692 Bacteria 2460
136 Ga0373933_0000036 3300035724 Bacteria 81168
137 Ga0373933_0005731 3300035724 Bacteria 6757
138 Ga0373947_0002602 3300035725 Bacteria 10833
139 Ga0373937_0000001 3300036401 Bacteria 478903
140 Ga0373937_0005505 3300036401 Bacteria 10853
141 Ga0373937_0017192 3300036401 Bacteria 6438
142 Ga0373937_0191272 3300036401 Bacteria 1923
143 Ga0373925_0004815 3300037068 Bacteria 10168
144 Ga0373925_0011415 3300037068 Bacteria 6435
145 Ga0373925_0039401 3300037068 Bacteria 3496
146 Ga0436364_0056338 3300037853 Bacteria 11545
147 Ga0436364_0589276 3300037853 Bacteria 5434
148 Ga0495651_0005173 3300046462 Bacteria 9951
149 Ga0495607_0000828 3300046501 Bacteria 29233
150 Ga0495608_0002090 3300046511 Bacteria 14397
151 Ga0495628_0020431 3300046516 Bacteria 5461
152 Ga0495652_0005602 3300046529 Bacteria 11786
153 Ga0495587_0000116 3300046536 Bacteria 60612
154 Ga0495645_0018839 3300046543 Bacteria 4965
155 Ga0495623_0002181 3300046679 Bacteria 13052
156 Ga0495613_0000397 3300046689 Bacteria 37243
157 Ga0495613_0001082 3300046689 Bacteria 20779
158 Ga0495581_0051441 3300047315 Bacteria 2379
159 Ga0495674_0041152 3300047319 Bacteria 4130
160 Ga0495675_0000319 3300047444 Bacteria 34255
161 Ga0495684_0005089 3300047471 Bacteria 10252
162 Ga0495602_0000448 3300048088 Bacteria 38588
163 Ga0496100_0016810 3300048903 Bacteria 4304
164 Ga0496106_0048749 3300048909 Bacteria 3191
165 Ga0496114_0006131 3300048917 Bacteria 9457
166 Ga0496115_0014771 3300048918 Bacteria 5920
167 Ga0496121_0001359 3300048924 Bacteria 41717
168 nmdc:mga09592_26838_c1 3300050508 Bacteria 4774
169 nmdc:mga06r32_30662_c1 3300050510 Bacteria 5047
170 nmdc:mga06r32_8303_c1 3300050510 Bacteria 9348
171 nmdc:mga08y16_89215_c1 3300050511 Bacteria 3213
172 Ga0495601_0004158 3300053077 Bacteria 8343
173 Ga0495619_0002209 3300053085 Bacteria 12891
174 Ga0500643_002715 3300053087 Bacteria 8893
175 Ga0500647_0002960 3300053091 Bacteria 6500
176 Ga0500595_000210 3300053119 Bacteria 39725
177 Ga0500573_0000002 3300053140 Bacteria 407088
178 Ga0500622_0001586 3300053156 Bacteria 17904
179 Ga0157369_10018289
180 JGI25165J46597_1000036
181 Ga0070683_100014237
182 Ga0070680_100005303
183 Ga0068868_100064032
184 Ga0070675_100009385
185 Ga0070671_100027568
186 Ga0070714_100000985
187 Ga0070713_100011825
188 Ga0070713_100022132
189 Ga0070713_100048576
190 Ga0070713_100054850
191 Ga0070711_100006365
192 Ga0070678_100018219
193 Ga0070681_10000460
194 Ga0070681_10000668
195 Ga0070679_100000666
196 Ga0070679_100034478
197 Ga0070684_100042620
198 Ga0070665_100000328
199 Ga0070665_100001250
200 Ga0068855_100001590
201 Ga0068855_100004778
202 Ga0068855_100049153
203 Ga0068855_100192095
204 Ga0068859_100121730
205 Ga0081539_10027994
206 Ga0070717_10040423
207 Ga0097621_100005090
208 Ga0097621_100019696
209 Ga0097621_100064187
210 Ga0097621_100089509
211 Ga0068871_100007185
212 Ga0075428_100002762
213 Ga0075428_100140526
214 Ga0075430_100013246
215 Ga0075431_100006087
216 Ga0068865_100031919
217 Ga0097620_100121734
218 Ga0105240_10009690
219 Ga0105240_10011404
220 Ga0105240_10051805
221 Ga0105240_10126580
222 Ga0105240_10146228
223 Ga0111539_10074483
224 Ga0105245_10004134
225 Ga0105245_10005259
226 Ga0105245_10006654
227 Ga0105245_10038941
228 Ga0105245_10045543
229 Ga0105243_10004027
230 Ga0105243_10071268
231 Ga0105242_10026263
232 Ga0105248_10003842
233 Ga0105248_10010906
234 Ga0105248_10072645
235 Ga0105237_10013608
236 Ga0105237_10106831
237 Ga0105238_10005358
238 Ga0105246_10010764
239 Ga0105246_10064023
240 Ga0157370_10000667
241 Ga0157370_10000919
242 Ga0157370_10031507
243 Ga0157370_10053963
244 Ga0157369_10001646
245 Ga0157369_10003017
246 Ga0157369_10043270
247 Ga0157369_10045007
248 Ga0157369_10064874
249 Ga0157378_10007621
250 Ga0163162_10060735
251 Ga0163162_10090946
252 Ga0157372_10012703
253 Ga0157375_10031979
254 Ga0163163_10001500
255 Ga0157379_10002566
256 Ga0157376_10071690
257 Ga0163161_10024778
258 Ga0213875_10008403
259 Ga0213875_10029938
260 Ga0207427_103802
261 Ga0209233_1000015
262 Ga0207680_10023435
263 Ga0207707_10000107
264 Ga0207707_10023120
265 Ga0207707_10069244
266 Ga0207695_10002755
267 Ga0207695_10003371
268 Ga0207695_10004996
269 Ga0207695_10067272
270 Ga0207660_10002601
271 Ga0207652_10000738
272 Ga0207652_10039126
273 Ga0207694_10003158
274 Ga0207650_10021606
275 Ga0207687_10003975
276 Ga0207687_10006713
277 Ga0207687_10012836
278 Ga0207700_10015804
279 Ga0207700_10031212
280 Ga0207700_10097615
281 Ga0207644_10006543
282 Ga0207709_10005012
283 Ga0207691_10042685
284 Ga0207711_10008778
285 Ga0207711_10011368
286 Ga0207661_10068727
287 Ga0207667_10001499
288 Ga0207651_10013550
289 Ga0207703_10049091
290 Ga0207702_10042311
291 Ga0207648_10038545
292 Ga0207676_10167814
293 Ga0207683_10012819
294 Ga0207683_10023426
295 Ga0268266_10000234
296 Ga0268266_10030263
297 Ga0265338_10009466
298 Ga0265338_10070651
299 Ga0265340_10003366
300 Ga0265339_10018741
301 Ga0265331_10005740
302 Ga0265327_10002223
303 Ga0265313_10007494
304 Ga0265314_10000674
305 Ga0265314_10042513
306 Ga0307416_100004830
307 Ga0307415_100037031
308 Ga0373956_0005975
309 Ga0373943_0003272
310 Ga0373955_0002556
311 Ga0373924_0002248
312 Ga0373935_0037780
313 Ga0373935_0058600
314 Ga0373933_0000036
315 Ga0373933_0005731
316 Ga0373947_0002602
317 Ga0373937_0000001
318 Ga0373937_0005505
319 Ga0373937_0017192
320 Ga0373937_0191272
321 Ga0373925_0004815
322 Ga0373925_0011415
323 Ga0373925_0039401
324 Ga0436364_0056338
325 Ga0436364_0589276
326 Ga0495651_0005173
327 Ga0495607_0000828
328 Ga0495608_0002090
329 Ga0495628_0020431
330 Ga0495652_0005602
331 Ga0495587_0000116
332 Ga0495645_0018839
333 Ga0495623_0002181
334 Ga0495613_0000397
335 Ga0495613_0001082
336 Ga0495581_0051441
337 Ga0495674_0041152
338 Ga0495675_0000319
339 Ga0495684_0005089
340 Ga0495602_0000448
341 Ga0496100_0016810
342 Ga0496106_0048749
343 Ga0496114_0006131
344 Ga0496115_0014771
345 Ga0496121_0001359
346 nmdc:mga09592_26838_c1
347 nmdc:mga06r32_30662_c1
348 nmdc:mga06r32_8303_c1
349 nmdc:mga08y16_89215_c1
350 Ga0495601_0004158
351 Ga0495619_0002209
352 Ga0500643_002715
353 Ga0500647_0002960
354 Ga0500595_000210
355 Ga0500573_0000002
356 Ga0500622_0001586

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u3h-assembly1.cif.gz_A crystal structure of fn3con 0.7604 27 153
7y8i-assembly1.cif.gz_A crystal structure of sdscam fniii3 domain, isoform alpha7 0.7539 27 156
7y8i-assembly3.cif.gz_C crystal structure of sdscam fniii3 domain, isoform alpha7 0.7491 27 156
6brb-assembly1.cif.gz_D novel non-antibody protein scaffold targeting cd40l 0.7405 30 156
6brb-assembly1.cif.gz_D novel non-antibody protein scaffold targeting cd40l 0.7331 30 156
ID Description Score Start End Superfamily
af_Q9HD43_477_563_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7708 28 153 2.60.40.10
af_Q99715_1845_1934_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7696 28 156 2.60.40.10
af_A0A0G2JXZ9_406_497_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7659 27 156 2.60.40.10
4u3hA00 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7604 27 153 2.60.40.10
af_Q80X19_628_717_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7581 29 156 2.60.40.10
ID Description Score Start End GO Terms
AF-A0A2W4Q9J7-F1-model_v4 Right handed beta helix domain-containing protein 0.9696 22 683
AF-A0A7C3C581-F1-model_v4 Uncharacterized protein 0.9691 433 684
AF-A0A2D8RIW1-F1-model_v4 Right handed beta helix domain-containing protein 0.9636 22 684
AF-A0A7V2MHE1-F1-model_v4 Carbohydrate-binding domain-containing protein 0.9619 22 684 GO:0004553
GO:0016052
GO:0030246
AF-A0A353ZH13-F1-model_v4 Right handed beta helix domain-containing protein 0.9576 22 683

Map