F272249

General Info

Members Datasets Scaffolds Average Seq Length
178 138 356 466

Family's Representative Sequence

Representative Sequence 3300031251|Ga0265327_10003090|Ga0265327_1000309014
Length 496
Sequence MNGAKPRNTPALIDSSTFVSVEISVSICQERVPGRTEDQSVNFDEYRRYDATGLAKLVADKEVSAAELLTLARERAAAVNPKINAIVRDVPAGKPSEELSGPFAGVPFLIKDLAQDYAGTPSSHGSRSLKSLPAKEHATIVQRWIDAGLVIFGKTNLPEFGAKAISEPEVWGPARNPWDLTRTPGGLVGLKPGRGLTPFGPAGGELMHGAAVQGVVSRTVRDTAAMLDVITGGEPWGPYVPGLPPSSFASAVGENPPKLRIGVRVPSAITPTPHPEAFAAVAATVRTLTELGHHVEELPQAPFDDSELARDFLLTWFVFLAWEVADAKRLTGAGDDSFERDTLIMAALGRATSSVDYVAAVQRRHDHARRLTTFFGSYDLLLTPTLATPPPKIGEFDLPAALRTAADVSLKTRTASLLRYTKIVDDMVEKNLGWVPYTQLANLTGRPAISLPLHWTADGLPLGVQFVAPLGGESLLIQLAAQLEQAVPWADRVAPL

Samples

Sample ID Description Type Environment
1 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
2 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
3 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
4 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
15 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
16 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
23 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
34 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
45 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
48 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
49 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
50 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
51 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
52 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
53 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
54 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
55 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
56 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
57 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
58 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
59 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
60 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
61 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
62 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
65 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
66 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
67 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
68 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
69 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
70 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
71 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
72 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
73 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
74 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
75 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
76 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
77 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
78 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
79 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
80 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
81 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
82 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
83 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
84 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
89 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
90 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
91 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
92 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
93 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
94 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
95 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
96 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
97 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
98 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
99 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
106 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
107 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
108 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
109 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
110 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
111 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
112 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
113 2508501039 Frankia saprophytica CN3 Isolate Nodule
114 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
115 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
116 2643221692 Nocardia sp. Root136 Isolate Unclassified
117 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
118 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
119 2687453737 Frankia sp. BMG5.36 Isolate Nodule
120 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
121 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
122 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
123 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
124 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
125 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
126 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
127 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
128 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
129 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
130 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
131 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
132 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
133 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
134 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
135 2929212328 Mycolicibacterium sp. R-73050 Hybrid assembly Isolate Unclassified
136 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
137 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
138 8002775197 Frankia nepalensis CN7 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.39
Metatranscriptomes 0
Isolates 14.61

Biome Distribution

Category Percentage (%)
Aerial Root 1.12
Bulb 0
Endosphere 21.35
Nodule 3.37
Rhizoplane 7.87
Rhizosphere 49.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265327_10003090 3300031251 Bacteria 16431
2 Ga0055535_1000276 3300003761 Bacteria 53888
3 Ga0055529_1000324 3300003763 Bacteria 53888
4 Ga0055540_1000143 3300003792 Bacteria 71425
5 Ga0055540_1000873 3300003792 Bacteria 19977
6 Ga0055540_1001318 3300003792 Bacteria 14976
7 Ga0070666_10019697 3300005335 Bacteria 4359
8 Ga0068868_100022236 3300005338 Bacteria 4784
9 Ga0070692_10008924 3300005345 Bacteria 4495
10 Ga0070673_100091667 3300005364 Bacteria 2485
11 Ga0070667_100000722 3300005367 Bacteria 31740
12 Ga0070667_100054717 3300005367 Bacteria 3370
13 Ga0070710_10000172 3300005437 Bacteria 29634
14 Ga0070701_10005765 3300005438 Bacteria 5153
15 Ga0070700_100006898 3300005441 Bacteria 6099
16 Ga0068859_100000054 3300005617 Bacteria 123173
17 Ga0068860_100001165 3300005843 Bacteria 28787
18 Ga0068862_100000037 3300005844 Bacteria 172796
19 Ga0081539_10005537 3300005985 Bacteria 12801
20 Ga0075365_10000678 3300006038 Bacteria 13665
21 Ga0075368_10000452 3300006042 Bacteria 12112
22 Ga0075363_100000177 3300006048 Bacteria 16713
23 Ga0075363_100001394 3300006048 Bacteria 9123
24 Ga0075363_100006186 3300006048 Bacteria 5411
25 Ga0075363_100018794 3300006048 Bacteria 3446
26 Ga0075363_100060244 3300006048 Bacteria 2043
27 Ga0075364_10006393 3300006051 Bacteria 6928
28 Ga0075364_10056632 3300006051 Bacteria 2567
29 Ga0075364_10072723 3300006051 Bacteria 2266
30 Ga0075364_10124381 3300006051 Bacteria 1728
31 Ga0075367_10004730 3300006178 Bacteria 6695
32 Ga0075369_10028697 3300006186 Bacteria 2334
33 Ga0075370_10006465 3300006353 Bacteria 5897
34 Ga0075370_10033496 3300006353 Bacteria 2877
35 Ga0097620_100000054 3300006931 Bacteria 123173
36 Ga0105243_10017472 3300009148 Bacteria 5423
37 Ga0105248_10000018 3300009177 Bacteria 294894
38 Ga0105248_10027740 3300009177 Bacteria 6306
39 Ga0105237_10000989 3300009545 Bacteria 38202
40 Ga0105249_10022178 3300009553 Bacteria 5687
41 Ga0105239_10011338 3300010375 Bacteria 9949
42 Ga0163163_10196846 3300014325 Bacteria 2063
43 Ga0209258_100402 3300025242 Bacteria 54030
44 Ga0209455_1000287 3300025272 Bacteria 54030
45 Ga0209673_1010472 3300025273 Bacteria 3907
46 Ga0209051_1000328 3300025303 Bacteria 71477
47 Ga0209051_1000681 3300025303 Bacteria 37784
48 Ga0209051_1001040 3300025303 Bacteria 26240
49 Ga0207692_10000228 3300025898 Bacteria 19007
50 Ga0207671_10009393 3300025914 Bacteria 8176
51 Ga0207669_10051417 3300025937 Bacteria 2469
52 Ga0207711_10000620 3300025941 Bacteria 35686
53 Ga0207712_10004192 3300025961 Bacteria 9104
54 Ga0207658_10002731 3300025986 Bacteria 12753
55 Ga0207658_10045617 3300025986 Bacteria 3196
56 Ga0207708_10000589 3300026075 Bacteria 28085
57 Ga0207648_10013893 3300026089 Bacteria 7467
58 Ga0207683_10081519 3300026121 Bacteria 2872
59 Ga0209813_10001516 3300027866 Bacteria 5218
60 Ga0268265_10000008 3300028380 Bacteria 417328
61 Ga0268264_10001390 3300028381 Bacteria 22683
62 Ga0265336_10000011 3300028666 Bacteria 275816
63 Ga0265324_10003418 3300029957 Bacteria 7578
64 Ga0316177_1056141 3300030731 Bacteria 4720
65 Ga0316176_1169844 3300030732 Bacteria 6830
66 Ga0314311_1036123 3300030733 Bacteria 2565
67 Ga0265327_10000071 3300031251 Bacteria 215502
68 Ga0265327_10014258 3300031251 Bacteria 5208
69 Ga0307516_10005991 3300031730 Bacteria 14373
70 Ga0307410_10015134 3300031852 Bacteria 4567
71 Ga0307409_100180021 3300031995 Bacteria 1870
72 Ga0307416_100011655 3300032002 Bacteria 5880
73 Ga0307416_100018528 3300032002 Bacteria 4907
74 Ga0316574_0033234 3300035398 Bacteria 3139
75 Ga0439448_0037356 3300042005 Bacteria 1560
76 Ga0466972_0021228 3300044658 Bacteria 3240
77 Ga0466972_0053132 3300044658 Bacteria 1951
78 Ga0466965_0004234 3300044683 Bacteria 6377
79 Ga0466965_0006757 3300044683 Bacteria 5234
80 Ga0466965_0010458 3300044683 Bacteria 4329
81 Ga0466966_0023087 3300044684 Bacteria 4075
82 Ga0466966_0056024 3300044684 Bacteria 2495
83 Ga0466970_0050455 3300044765 Bacteria 2219
84 Ga0466960_0001135 3300044901 Bacteria 9560
85 Ga0466967_0007033 3300045976 Bacteria 8057
86 Ga0466967_0019568 3300045976 Bacteria 5448
87 Ga0495629_0004609 3300046459 Bacteria 10319
88 Ga0495641_0002011 3300046461 Bacteria 16506
89 Ga0495653_0020016 3300046463 Bacteria 5423
90 Ga0495631_0010333 3300046518 Bacteria 4622
91 Ga0495644_0029061 3300046523 Bacteria 2090
92 Ga0495666_0000188 3300046526 Bacteria 26481
93 Ga0495665_0000586 3300046531 Bacteria 18594
94 Ga0495587_0000543 3300046536 Bacteria 26180
95 Ga0495622_0000849 3300046557 Bacteria 16827
96 Ga0495658_0007988 3300046683 Bacteria 5241
97 Ga0495624_0001344 3300046690 Bacteria 19219
98 Ga0495600_0026545 3300046809 Bacteria 3738
99 Ga0495581_0000880 3300047315 Bacteria 16047
100 Ga0495604_0056116 3300047317 Bacteria 3033
101 Ga0495686_0000011 3300047472 Bacteria 514750
102 Ga0495686_0053853 3300047472 Bacteria 2520
103 Ga0495686_0057552 3300047472 Bacteria 2426
104 Ga0495686_0083058 3300047472 Bacteria 1954
105 Ga0496101_0000118 3300048904 Bacteria 77684
106 Ga0496101_0000133 3300048904 Bacteria 67081
107 Ga0496102_0000032 3300048905 Bacteria 214049
108 Ga0496102_0017270 3300048905 Bacteria 6320
109 Ga0496103_0000027 3300048906 Bacteria 213677
110 Ga0496103_0001682 3300048906 Bacteria 14467
111 Ga0496106_0002241 3300048909 Bacteria 14411
112 Ga0496106_0125285 3300048909 Bacteria 2011
113 Ga0496107_0000106 3300048910 Bacteria 40710
114 Ga0496108_0008677 3300048911 Bacteria 8241
115 Ga0496109_0000077 3300048912 Bacteria 103492
116 Ga0496109_0031367 3300048912 Bacteria 4769
117 Ga0496110_0120370 3300048913 Bacteria 2364
118 Ga0496114_0006592 3300048917 Bacteria 9152
119 Ga0496116_0000088 3300048919 Bacteria 213188
120 Ga0496116_0031820 3300048919 Bacteria 3768
121 Ga0496117_0000018 3300048920 Bacteria 479613
122 Ga0496117_0012557 3300048920 Bacteria 7455
123 Ga0496117_0075870 3300048920 Bacteria 2231
124 Ga0496118_0000013 3300048921 Bacteria 574008
125 Ga0496119_0002123 3300048922 Bacteria 22312
126 Ga0496120_0011116 3300048923 Bacteria 6214
127 Ga0496121_0000002 3300048924 Bacteria 1494588
128 Ga0496121_0000095 3300048924 Bacteria 209011
129 Ga0496122_0000051 3300048925 Bacteria 265104
130 Ga0496123_0015642 3300048926 Bacteria 6209
131 Ga0496124_0000002 3300048927 Bacteria 1494588
132 Ga0496124_0049863 3300048927 Bacteria 3569
133 Ga0496125_0000002 3300048928 Bacteria 1480920
134 Ga0496126_0000011 3300048929 Bacteria 744275
135 Ga0496126_0000415 3300048929 Bacteria 86270
136 Ga0501032_0014899 3300049569 Bacteria 5502
137 Ga0501034_0101455 3300049571 Bacteria 2871
138 Ga0501037_0005031 3300049573 Bacteria 9617
139 Ga0501038_0013527 3300049574 Bacteria 7438
140 Ga0501070_0026073 3300049586 Bacteria 4904
141 Ga0501044_0019920 3300049823 Bacteria 7166
142 nmdc:mga03n38_1408_c1 3300050490 Bacteria 6857
143 nmdc:mga00v17_16470_c1 3300050491 Bacteria 4165
144 nmdc:mga00v17_37832_c1 3300050491 Bacteria 2883
145 nmdc:mga0yw44_1324_c1 3300050492 Bacteria 9788
146 nmdc:mga0yw44_2082_c1 3300050492 Bacteria 8354
147 nmdc:mga06z11_165486_c1 3300050494 Bacteria 1266
148 nmdc:mga07m45_17741_c1 3300050496 Bacteria 3829
149 nmdc:mga07m45_5101_c1 3300050496 Bacteria 6501
150 nmdc:mga0sz30_5610_c1 3300050516 Bacteria 4610
151 Ga0500635_0000018 3300053080 Bacteria 112805
152 Ga0500643_001358 3300053087 Bacteria 14224
153 2508674202 2508501039 Bacteria 9978592
154 2552110657 2551306166 Bacteria 9731570
155 2644487574 2643221687 Bacteria 6500351
156 2644511875 2643221692 Bacteria 7282860
157 2644638451 2643221715 Bacteria 6671032
158 2676198733 2675902999 Bacteria 9438463
159 2689960019 2687453737 Bacteria 11203906
160 2774396173 2773857762 Bacteria 5971770
161 2774843311 2773857921 Bacteria 9435764
162 2809197811 2808606439 Bacteria 5952208
163 2812347699 2811994878 Bacteria 5992952
164 2842135878 2842134933 Bacteria 5847019
165 2891968891 2891968417 Bacteria 5821697
166 2902792497 2902792274 Bacteria 7270173
167 2902812441 2902810491 Bacteria 6794147
168 2902839047 2902837492 Bacteria 6697721
169 2904768245 2904765812 Bacteria 5369154
170 2904775433 2904770941 Bacteria 5580202
171 2908815555 2908811453 Bacteria 5478616
172 2919421569 2919420072 Bacteria 5390363
173 2919434873 2919432681 Bacteria 5390474
174 2919714557 2919713450 Bacteria 7431245
175 2929216026 2929212328 Bacteria 7708288
176 2984579334 2984576629 Bacteria 4248407
177 2990256945 2990256926 Bacteria 4252839
178 8002779300 8002775197 Bacteria 10728764
179 Ga0265327_10003090
180 Ga0055535_1000276
181 Ga0055529_1000324
182 Ga0055540_1000143
183 Ga0055540_1000873
184 Ga0055540_1001318
185 Ga0070666_10019697
186 Ga0068868_100022236
187 Ga0070692_10008924
188 Ga0070673_100091667
189 Ga0070667_100000722
190 Ga0070667_100054717
191 Ga0070710_10000172
192 Ga0070701_10005765
193 Ga0070700_100006898
194 Ga0068859_100000054
195 Ga0068860_100001165
196 Ga0068862_100000037
197 Ga0081539_10005537
198 Ga0075365_10000678
199 Ga0075368_10000452
200 Ga0075363_100000177
201 Ga0075363_100001394
202 Ga0075363_100006186
203 Ga0075363_100018794
204 Ga0075363_100060244
205 Ga0075364_10006393
206 Ga0075364_10056632
207 Ga0075364_10072723
208 Ga0075364_10124381
209 Ga0075367_10004730
210 Ga0075369_10028697
211 Ga0075370_10006465
212 Ga0075370_10033496
213 Ga0097620_100000054
214 Ga0105243_10017472
215 Ga0105248_10000018
216 Ga0105248_10027740
217 Ga0105237_10000989
218 Ga0105249_10022178
219 Ga0105239_10011338
220 Ga0163163_10196846
221 Ga0209258_100402
222 Ga0209455_1000287
223 Ga0209673_1010472
224 Ga0209051_1000328
225 Ga0209051_1000681
226 Ga0209051_1001040
227 Ga0207692_10000228
228 Ga0207671_10009393
229 Ga0207669_10051417
230 Ga0207711_10000620
231 Ga0207712_10004192
232 Ga0207658_10002731
233 Ga0207658_10045617
234 Ga0207708_10000589
235 Ga0207648_10013893
236 Ga0207683_10081519
237 Ga0209813_10001516
238 Ga0268265_10000008
239 Ga0268264_10001390
240 Ga0265336_10000011
241 Ga0265324_10003418
242 Ga0316177_1056141
243 Ga0316176_1169844
244 Ga0314311_1036123
245 Ga0265327_10000071
246 Ga0265327_10014258
247 Ga0307516_10005991
248 Ga0307410_10015134
249 Ga0307409_100180021
250 Ga0307416_100011655
251 Ga0307416_100018528
252 Ga0316574_0033234
253 Ga0439448_0037356
254 Ga0466972_0021228
255 Ga0466972_0053132
256 Ga0466965_0004234
257 Ga0466965_0006757
258 Ga0466965_0010458
259 Ga0466966_0023087
260 Ga0466966_0056024
261 Ga0466970_0050455
262 Ga0466960_0001135
263 Ga0466967_0007033
264 Ga0466967_0019568
265 Ga0495629_0004609
266 Ga0495641_0002011
267 Ga0495653_0020016
268 Ga0495631_0010333
269 Ga0495644_0029061
270 Ga0495666_0000188
271 Ga0495665_0000586
272 Ga0495587_0000543
273 Ga0495622_0000849
274 Ga0495658_0007988
275 Ga0495624_0001344
276 Ga0495600_0026545
277 Ga0495581_0000880
278 Ga0495604_0056116
279 Ga0495686_0000011
280 Ga0495686_0053853
281 Ga0495686_0057552
282 Ga0495686_0083058
283 Ga0496101_0000118
284 Ga0496101_0000133
285 Ga0496102_0000032
286 Ga0496102_0017270
287 Ga0496103_0000027
288 Ga0496103_0001682
289 Ga0496106_0002241
290 Ga0496106_0125285
291 Ga0496107_0000106
292 Ga0496108_0008677
293 Ga0496109_0000077
294 Ga0496109_0031367
295 Ga0496110_0120370
296 Ga0496114_0006592
297 Ga0496116_0000088
298 Ga0496116_0031820
299 Ga0496117_0000018
300 Ga0496117_0012557
301 Ga0496117_0075870
302 Ga0496118_0000013
303 Ga0496119_0002123
304 Ga0496120_0011116
305 Ga0496121_0000002
306 Ga0496121_0000095
307 Ga0496122_0000051
308 Ga0496123_0015642
309 Ga0496124_0000002
310 Ga0496124_0049863
311 Ga0496125_0000002
312 Ga0496126_0000011
313 Ga0496126_0000415
314 Ga0501032_0014899
315 Ga0501034_0101455
316 Ga0501037_0005031
317 Ga0501038_0013527
318 Ga0501070_0026073
319 Ga0501044_0019920
320 nmdc:mga03n38_1408_c1
321 nmdc:mga00v17_16470_c1
322 nmdc:mga00v17_37832_c1
323 nmdc:mga0yw44_1324_c1
324 nmdc:mga0yw44_2082_c1
325 nmdc:mga06z11_165486_c1
326 nmdc:mga07m45_17741_c1
327 nmdc:mga07m45_5101_c1
328 nmdc:mga0sz30_5610_c1
329 Ga0500635_0000018
330 Ga0500643_001358
331 2508674202
332 2552110657
333 2644487574
334 2644511875
335 2644638451
336 2676198733
337 2689960019
338 2774396173
339 2774843311
340 2809197811
341 2812347699
342 2842135878
343 2891968891
344 2902792497
345 2902812441
346 2902839047
347 2904768245
348 2904775433
349 2908815555
350 2919421569
351 2919434873
352 2919714557
353 2929216026
354 2984579334
355 2990256945
356 8002779300

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

185

477

0.87

PF01425

Amidase

Amidase

67

186

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3a2q-assembly1.cif.gz_A structure of 6-aminohexanoate cyclic dimer hydrolase complexed with substrate 0.8937 7 459
3a2p-assembly1.cif.gz_A structure of 6-aminohexanoate cyclic dimer hydrolase 0.882 7 461
3a2q-assembly1.cif.gz_A structure of 6-aminohexanoate cyclic dimer hydrolase complexed with substrate 0.8716 7 459
3a2p-assembly1.cif.gz_A structure of 6-aminohexanoate cyclic dimer hydrolase 0.8637 7 461
4yji-assembly1.cif.gz_A the crystal structure of a bacterial aryl acylamidase belonging to the amidase signature (as) enzymes family 0.8368 9 456
ID Description Score Start End Superfamily
3a2pA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.882 7 461 3.90.1300.10
3a2pA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8637 7 461 3.90.1300.10
af_P9WQ95_12_473_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8334 9 459 3.90.1300.10
af_P9WQ97_5_462_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8274 10 459 3.90.1300.10
af_P9WQ99_18_483_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8261 10 458 3.90.1300.10
ID Description Score Start End GO Terms
AF-D3SA22-F1-model_v4 Amidase 0.9705 1 458 GO:0016787
AF-N8VDQ9-F1-model_v4 Amidase domain-containing protein 0.9675 230 453 GO:0003824
AF-A0A257SD36-F1-model_v4 deleted 0.9658 7 459
AF-A0A397QQT4-F1-model_v4 deleted 0.9656 1 459
AF-A0A5B7ULI4-F1-model_v4 6-aminohexanoate-cyclic-dimer hydrolase (EC 3.5.2.12) 0.9649 1 459 GO:0019874

Map