F272297

General Info

Members Datasets Scaffolds Average Seq Length
178 151 178 231

Family's Representative Sequence

Representative Sequence 3300032005|Ga0307411_10084026|Ga0307411_100840262
Length 281
Sequence LDPVADMNSPDVRELSRRIDAAFAERGSLTPANAPADLVEAVLAVIDLLDSGRARVAEKIDGQWRVHEWLKKAVLLSFRLFDNAPVAAAYTQFYDKVPLKYAAYDAERFKTDGVRVVPPAIVRRGAYVARNAVDTWATVGSCAQIGRNVHLSGGVGIGGVLEPLQAAPTIVEDDCFIGARSEVVEGVVVERGAVLSMGVYVGQSTRIYDRERDEILYGRIPAGAVVVPGSLPAANGKYSLYAAVIVKRVDAQTRAKVSINELLRSADEETGDKPSLNRNDR

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
4 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
5 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
18 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
31 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
32 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
39 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
45 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
46 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
47 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
71 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
77 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
78 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
79 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
82 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
83 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
84 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
85 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
88 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
89 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
90 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
91 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
92 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
93 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
94 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
95 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
96 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
97 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
98 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
99 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
100 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
101 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
102 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
103 3300042123 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_082716_2228 Metagenome Rhizosphere
104 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
105 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
106 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
107 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
108 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
109 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
112 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
113 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
114 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
115 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
116 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
117 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
118 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
124 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
125 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
126 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
127 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
128 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
129 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
135 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
139 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
140 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
141 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
142 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
143 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
144 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
145 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
146 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
147 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
148 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
149 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
150 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.73
Nodule 0
Rhizoplane 6.74
Rhizosphere 73.6
Stem 0
Stem Tuber 0
Unclassified 3.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1342129 2162886007 Bacteria 1227
2 JGI25406J46586_10026720 3300003203 Bacteria 2221
3 Ga0055536_1010579 3300003781 Bacteria 3640
4 Ga0055530_10003704 3300003791 Bacteria 8511
5 Ga0055540_1008316 3300003792 Bacteria 3751
6 Ga0055531_10012940 3300003794 Bacteria 3885
7 Ga0065704_10006867 3300005289 Bacteria 3811
8 Ga0070658_10187884 3300005327 Bacteria 1741
9 Ga0070676_10048903 3300005328 Bacteria 2473
10 Ga0068869_100114024 3300005334 Bacteria 2060
11 Ga0070680_100027383 3300005336 Bacteria 4564
12 Ga0070668_100031068 3300005347 Bacteria 4063
13 Ga0070669_100007871 3300005353 Bacteria 7618
14 Ga0070674_100047953 3300005356 Bacteria 2930
15 Ga0070705_100117678 3300005440 Bacteria 1710
16 Ga0070700_100096711 3300005441 Bacteria 1938
17 Ga0070662_100020226 3300005457 Bacteria 4530
18 Ga0070672_100001677 3300005543 Bacteria 13800
19 Ga0070696_100000163 3300005546 Bacteria 37742
20 Ga0070696_100168456 3300005546 Bacteria 1618
21 Ga0070665_100009801 3300005548 Bacteria 9686
22 Ga0068859_100340662 3300005617 Bacteria 1594
23 Ga0068861_100003473 3300005719 Bacteria 10458
24 Ga0068870_10097475 3300005840 Bacteria 1655
25 Ga0068862_100014149 3300005844 Bacteria 6616
26 Ga0068862_100113504 3300005844 Bacteria 2380
27 Ga0081455_10000999 3300005937 Bacteria 35875
28 Ga0081539_10000004 3300005985 Bacteria 555600
29 Ga0075368_10001507 3300006042 Bacteria 7460
30 Ga0075363_100041941 3300006048 Bacteria 2415
31 Ga0075364_10028915 3300006051 Bacteria 3550
32 Ga0075362_10021311 3300006177 Bacteria 2717
33 Ga0075369_10020140 3300006186 Bacteria 2731
34 Ga0075369_10038690 3300006186 Bacteria 2036
35 Ga0075370_10002542 3300006353 Bacteria 8485
36 Ga0075428_100027680 3300006844 Bacteria 6271
37 Ga0075428_100106132 3300006844 Bacteria 3062
38 Ga0075430_100035071 3300006846 Bacteria 4259
39 Ga0075430_100266975 3300006846 Bacteria 1417
40 Ga0075431_100082727 3300006847 Bacteria 3314
41 Ga0075429_100046002 3300006880 Bacteria 3797
42 Ga0075429_100221446 3300006880 Bacteria 1657
43 Ga0097620_100340669 3300006931 Bacteria 1594
44 Ga0099794_10203394 3300007265 Bacteria 1014
45 Ga0099795_10007308 3300007788 Bacteria 3075
46 Ga0105240_10001106 3300009093 Bacteria 47507
47 Ga0105240_10074376 3300009093 Bacteria 4194
48 Ga0105240_10113423 3300009093 Bacteria 3275
49 Ga0105240_10195131 3300009093 Bacteria 2378
50 Ga0105243_10396920 3300009148 Bacteria 1280
51 Ga0099796_10069431 3300010159 Bacteria 1268
52 Ga0163163_10744474 3300014325 Bacteria 1043
53 Ga0182008_10001208 3300014497 Bacteria 17812
54 Ga0182007_10007025 3300015262 Bacteria 4775
55 Ga0183362_10001 3300015683 Bacteria 2046624
56 Ga0209676_1000669 3300025292 Bacteria 48834
57 Ga0209050_1000661 3300025298 Bacteria 53102
58 Ga0209051_1005767 3300025303 Bacteria 7139
59 Ga0209257_1001138 3300025304 Bacteria 34042
60 Ga0207645_10000328 3300025907 Bacteria 39622
61 Ga0207705_10123560 3300025909 Bacteria 1922
62 Ga0207695_10001038 3300025913 Bacteria 48817
63 Ga0207695_10091504 3300025913 Bacteria 3055
64 Ga0207660_10165942 3300025917 Bacteria 1707
65 Ga0207681_10022951 3300025923 Bacteria 3985
66 Ga0207706_10000476 3300025933 Bacteria 42949
67 Ga0207669_10004888 3300025937 Bacteria 5954
68 Ga0207691_10005421 3300025940 Bacteria 12311
69 Ga0207668_10108000 3300025972 Bacteria 2082
70 Ga0207658_10048478 3300025986 Bacteria 3115
71 Ga0207677_10019028 3300026023 Bacteria 4136
72 Ga0207648_10000334 3300026089 Bacteria 51629
73 Ga0207674_10023223 3300026116 Bacteria 6645
74 Ga0207675_100000130 3300026118 Bacteria 63098
75 Ga0207698_10031504 3300026142 Bacteria 3828
76 Ga0210000_1000598 3300027462 Bacteria 4932
77 Ga0209983_1002207 3300027665 Bacteria 4284
78 Ga0209971_1000594 3300027682 Bacteria 9419
79 Ga0209998_10000549 3300027717 Bacteria 10143
80 Ga0209813_10021493 3300027866 Bacteria 1815
81 Ga0209974_10000625 3300027876 Bacteria 11888
82 Ga0265354_1001371 3300028016 Bacteria 3535
83 Ga0268266_10084963 3300028379 Bacteria 2764
84 Ga0268265_10379350 3300028380 Bacteria 1300
85 Ga0268264_10583295 3300028381 Bacteria 1100
86 Ga0265338_10080767 3300028800 Bacteria 2731
87 Ga0307511_10000092 3300030521 Bacteria 76188
88 Ga0265327_10000814 3300031251 Bacteria 47176
89 Ga0265327_10062300 3300031251 Bacteria 1899
90 Ga0316575_10001388 3300031665 Bacteria 7787
91 Ga0316575_10029790 3300031665 Bacteria 2132
92 Ga0316575_10034883 3300031665 Bacteria 1977
93 Ga0265314_10059362 3300031711 Bacteria 2617
94 Ga0316576_10004964 3300031727 Bacteria 8058
95 Ga0316578_10005533 3300031728 Bacteria 6138
96 Ga0307516_10000209 3300031730 Bacteria 75193
97 Ga0307405_10058222 3300031731 Bacteria 2430
98 Ga0316577_10047159 3300031733 Bacteria 2406
99 Ga0307410_10300372 3300031852 Bacteria 1267
100 Ga0307411_10084026 3300032005 Bacteria 2201
101 Ga0316585_10076230 3300032137 Bacteria 1091
102 Ga0316214_1004010 3300033545 Bacteria 1881
103 Ga0373956_0088121 3300035119 Bacteria 1430
104 Ga0373955_0116905 3300035172 Bacteria 1547
105 Ga0316574_0000055 3300035398 Bacteria 29301
106 Ga0316574_0008074 3300035398 Bacteria 5822
107 Ga0316574_0009678 3300035398 Bacteria 5410
108 Ga0316574_0023877 3300035398 Bacteria 3654
109 Ga0316574_0196849 3300035398 Bacteria 1295
110 Ga0316574_0258570 3300035398 Bacteria 1112
111 Ga0316582_0070104 3300036647 Bacteria 2267
112 Ga0316584_0023879 3300036712 Bacteria 4468
113 Ga0316584_0191273 3300036712 Bacteria 1513
114 Ga0316581_0004776 3300037588 Bacteria 3486
115 Ga0439438_028395 3300041405 Bacteria 1505
116 Ga0439465_0003489 3300041413 Bacteria 5130
117 Ga0451795_1675744 3300041456 Bacteria 1460
118 Ga0439432_001800 3300042006 Bacteria 8039
119 Ga0439449_0003341 3300042007 Bacteria 6255
120 Ga0439452_020165 3300042010 Bacteria 1752
121 Ga0439462_0005279 3300042015 Bacteria 3183
122 Ga0450921_001912 3300042123 Bacteria 1327
123 Ga0450896_005133 3300042133 Bacteria 1783
124 Ga0439434_0003255 3300042435 Bacteria 4768
125 Ga0439434_0003387 3300042435 Bacteria 4666
126 Ga0451577_0035316 3300042876 Bacteria 4503
127 Ga0466972_0049047 3300044658 Bacteria 2039
128 Ga0453683_0068643 3300044673 Bacteria 2216
129 Ga0466965_0025777 3300044683 Bacteria 2848
130 Ga0453684_0068059 3300044712 Bacteria 4523
131 Ga0453684_0264755 3300044712 Bacteria 1967
132 Ga0466960_0074245 3300044901 Bacteria 1699
133 Ga0495627_044691 3300046453 Bacteria 1351
134 Ga0495642_0043027 3300046528 Bacteria 1842
135 Ga0495633_0112271 3300046558 Bacteria 1263
136 Ga0495625_0210303 3300046660 Bacteria 1279
137 Ga0495624_0045356 3300046690 Bacteria 2799
138 Ga0496101_0026224 3300048904 Bacteria 4051
139 Ga0496102_0075997 3300048905 Bacteria 3088
140 Ga0496104_0003006 3300048907 Bacteria 14518
141 Ga0496104_0122070 3300048907 Bacteria 2501
142 Ga0496105_0000714 3300048908 Bacteria 22482
143 Ga0496105_0030351 3300048908 Bacteria 4429
144 Ga0496109_0107032 3300048912 Bacteria 2597
145 Ga0496110_0146732 3300048913 Bacteria 2134
146 Ga0496111_0059979 3300048914 Bacteria 2757
147 Ga0496114_0139585 3300048917 Bacteria 2097
148 Ga0496115_0036757 3300048918 Bacteria 3878
149 Ga0496116_0000019 3300048919 Bacteria 533227
150 Ga0496121_0000018 3300048924 Bacteria 542045
151 Ga0496122_0000531 3300048925 Bacteria 79144
152 Ga0496123_0000108 3300048926 Bacteria 166102
153 Ga0501033_0015030 3300049570 Bacteria 5876
154 Ga0501034_0107005 3300049571 Bacteria 2789
155 Ga0501038_0009548 3300049574 Bacteria 8900
156 Ga0501039_0102383 3300049575 Bacteria 2235
157 Ga0501071_0257457 3300049587 Bacteria 1318
158 Ga0501072_0415709 3300049588 Bacteria 1066
159 Ga0501076_0314119 3300049592 Bacteria 1285
160 Ga0501035_0008095 3300049822 Bacteria 9798
161 Ga0501044_0061406 3300049823 Bacteria 3845
162 nmdc:mga00v17_32115_c1 3300050491 Bacteria 3102
163 nmdc:mga0yw44_52653_c1 3300050492 Bacteria 2469
164 nmdc:mga0k408_96790_c1 3300050493 Bacteria 1738
165 nmdc:mga07m45_141255_c1 3300050496 Bacteria 1395
166 nmdc:mga07m45_17029_c1 3300050496 Bacteria 3897
167 nmdc:mga07m45_31817_c1 3300050496 Bacteria 2924
168 nmdc:mga09592_26930_c1 3300050508 Bacteria 4767
169 nmdc:mga09592_38027_c1 3300050508 Bacteria 4038
170 nmdc:mga0qj67_37896_c1 3300050509 Bacteria 3780
171 nmdc:mga08y16_285169_c1 3300050511 Bacteria 1703
172 nmdc:mga0sz30_15751_c1 3300050516 Bacteria 2520
173 Ga0500583_0001536 3300053092 Bacteria 6659
174 Ga0500583_0139198 3300053092 Bacteria 1205
175 Ga0500568_0067821 3300053139 Bacteria 1370
176 Ga0500622_0001473 3300053156 Bacteria 18746
177 Ga0500624_000028 3300053157 Bacteria 106675
178 Ga0501084_0324352 3300054114 Bacteria 1301

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0264755 Ga0453684_0264755_1221_1955 190
2 3300005546 Ga0070696_100168456 Ga0070696_1001684562 213
3 3300046453 Ga0495627_044691 Ga0495627_044691_78_917 218
4 3300046558 Ga0495633_0112271 Ga0495633_0112271_184_1023 218
5 3300046660 Ga0495625_0210303 Ga0495625_0210303_321_1160 218
6 3300053157 Ga0500624_000028 Ga0500624_000028_38005_38844 218
7 3300005440 Ga0070705_100117678 Ga0070705_1001176783 219
8 3300027462 Ga0210000_1000598 Ga0210000_10005985 219
9 3300042435 Ga0439434_0003255 Ga0439434_0003255_1152_1964 219
10 3300049588 Ga0501072_0415709 Ga0501072_0415709_233_1045 219
11 3300009093 Ga0105240_10001106 Ga0105240_1000110625 220
12 3300025913 Ga0207695_10001038 Ga0207695_1000103825 220
13 3300031665 Ga0316575_10029790 Ga0316575_100297902 220
14 3300006186 Ga0075369_10038690 Ga0075369_100386902 221
15 3300030521 Ga0307511_10000092 Ga0307511_1000009262 221
16 3300049574 Ga0501038_0009548 Ga0501038_0009548_604_1449 221
17 3300049587 Ga0501071_0257457 Ga0501071_0257457_326_1144 221
18 3300049592 Ga0501076_0314119 Ga0501076_0314119_393_1211 221
19 3300053092 Ga0500583_0001536 Ga0500583_0001536_1113_1934 221
20 3300053139 Ga0500568_0067821 Ga0500568_0067821_183_1004 221
21 3300054114 Ga0501084_0324352 Ga0501084_0324352_370_1188 221
22 3300003203 JGI25406J46586_10026720 JGI25406J46586_100267203 222
23 3300005548 Ga0070665_100009801 Ga0070665_1000098018 222
24 3300005617 Ga0068859_100340662 Ga0068859_1003406622 222
25 3300005844 Ga0068862_100113504 Ga0068862_1001135042 222
26 3300005937 Ga0081455_10000999 Ga0081455_1000099913 222
27 3300005985 Ga0081539_10000004 Ga0081539_10000004238 222
28 3300006042 Ga0075368_10001507 Ga0075368_100015072 222
29 3300006048 Ga0075363_100041941 Ga0075363_1000419412 222
30 3300006051 Ga0075364_10028915 Ga0075364_100289154 222
31 3300006177 Ga0075362_10021311 Ga0075362_100213112 222
32 3300006186 Ga0075369_10020140 Ga0075369_100201402 222
33 3300006846 Ga0075430_100266975 Ga0075430_1002669752 222
34 3300006931 Ga0097620_100340669 Ga0097620_1003406692 222
35 3300014325 Ga0163163_10744474 Ga0163163_107444742 222
36 3300027866 Ga0209813_10021493 Ga0209813_100214932 222
37 3300028379 Ga0268266_10084963 Ga0268266_100849632 222
38 3300028380 Ga0268265_10379350 Ga0268265_103793501 222
39 3300031251 Ga0265327_10062300 Ga0265327_100623002 222
40 3300031733 Ga0316577_10047159 Ga0316577_100471592 222
41 3300036647 Ga0316582_0070104 Ga0316582_0070104_1141_1962 222
42 3300037588 Ga0316581_0004776 Ga0316581_0004776_165_986 222
43 3300044658 Ga0466972_0049047 Ga0466972_0049047_163_987 222
44 3300044901 Ga0466960_0074245 Ga0466960_0074245_629_1453 222
45 3300050491 nmdc:mga00v17_32115_c1 nmdc:mga00v17_32115_c1_1312_2136 222
46 3300050492 nmdc:mga0yw44_52653_c1 nmdc:mga0yw44_52653_c1_57_881 222
47 3300050493 nmdc:mga0k408_96790_c1 nmdc:mga0k408_96790_c1_489_1313 222
48 3300050496 nmdc:mga07m45_31817_c1 nmdc:mga07m45_31817_c1_289_1113 222
49 3300050516 nmdc:mga0sz30_15751_c1 nmdc:mga0sz30_15751_c1_891_1715 222
50 3300053092 Ga0500583_0139198 Ga0500583_0139198_288_1112 222
51 3300053156 Ga0500622_0001473 Ga0500622_0001473_73_891 222
52 3300003781 Ga0055536_1010579 Ga0055536_10105792 223
53 3300003791 Ga0055530_10003704 Ga0055530_100037044 223
54 3300003792 Ga0055540_1008316 Ga0055540_10083162 223
55 3300003794 Ga0055531_10012940 Ga0055531_100129402 223
56 3300005327 Ga0070658_10187884 Ga0070658_101878842 223
57 3300005334 Ga0068869_100114024 Ga0068869_1001140242 223
58 3300006353 Ga0075370_10002542 Ga0075370_100025424 223
59 3300007265 Ga0099794_10203394 Ga0099794_102033942 223
60 3300007788 Ga0099795_10007308 Ga0099795_100073081 223
61 3300010159 Ga0099796_10069431 Ga0099796_100694312 223
62 3300014497 Ga0182008_10001208 Ga0182008_100012082 223
63 3300015262 Ga0182007_10007025 Ga0182007_100070253 223
64 3300015683 Ga0183362_10001 Ga0183362_100011306 223
65 3300025292 Ga0209676_1000669 Ga0209676_100066943 223
66 3300025298 Ga0209050_1000661 Ga0209050_100066143 223
67 3300025303 Ga0209051_1005767 Ga0209051_10057674 223
68 3300025304 Ga0209257_1001138 Ga0209257_100113838 223
69 3300025909 Ga0207705_10123560 Ga0207705_101235602 223
70 3300025923 Ga0207681_10022951 Ga0207681_100229514 223
71 3300025986 Ga0207658_10048478 Ga0207658_100484782 223
72 3300026023 Ga0207677_10019028 Ga0207677_100190282 223
73 3300026142 Ga0207698_10031504 Ga0207698_100315043 223
74 3300031251 Ga0265327_10000814 Ga0265327_1000081430 223
75 3300031730 Ga0307516_10000209 Ga0307516_1000020935 223
76 3300031731 Ga0307405_10058222 Ga0307405_100582222 223
77 3300041405 Ga0439438_028395 Ga0439438_028395_426_1250 223
78 3300041413 Ga0439465_0003489 Ga0439465_0003489_169_993 223
79 3300041456 Ga0451795_1675744 Ga0451795_1675744_518_1342 223
80 3300042006 Ga0439432_001800 Ga0439432_001800_6128_6952 223
81 3300042007 Ga0439449_0003341 Ga0439449_0003341_5064_5888 223
82 3300042010 Ga0439452_020165 Ga0439452_020165_727_1551 223
83 3300042015 Ga0439462_0005279 Ga0439462_0005279_874_1698 223
84 3300042435 Ga0439434_0003387 Ga0439434_0003387_3800_4624 223
85 3300044683 Ga0466965_0025777 Ga0466965_0025777_1490_2314 223
86 3300046528 Ga0495642_0043027 Ga0495642_0043027_409_1233 223
87 3300048904 Ga0496101_0026224 Ga0496101_0026224_2860_3684 223
88 3300048905 Ga0496102_0075997 Ga0496102_0075997_1898_2722 223
89 3300048907 Ga0496104_0122070 Ga0496104_0122070_229_1053 223
90 3300048908 Ga0496105_0030351 Ga0496105_0030351_1556_2380 223
91 3300048912 Ga0496109_0107032 Ga0496109_0107032_356_1180 223
92 3300048913 Ga0496110_0146732 Ga0496110_0146732_547_1371 223
93 3300048914 Ga0496111_0059979 Ga0496111_0059979_269_1093 223
94 3300048925 Ga0496122_0000531 Ga0496122_0000531_68360_69184 223
95 3300048926 Ga0496123_0000108 Ga0496123_0000108_146287_147111 223
96 3300049570 Ga0501033_0015030 Ga0501033_0015030_822_1643 223
97 3300049571 Ga0501034_0107005 Ga0501034_0107005_1251_2072 223
98 3300049575 Ga0501039_0102383 Ga0501039_0102383_1150_1971 223
99 3300049822 Ga0501035_0008095 Ga0501035_0008095_3663_4484 223
100 3300049823 Ga0501044_0061406 Ga0501044_0061406_644_1465 223
101 3300050496 nmdc:mga07m45_141255_c1 nmdc:mga07m45_141255_c1_467_1291 223
102 3300050496 nmdc:mga07m45_17029_c1 nmdc:mga07m45_17029_c1_2248_3072 223
103 3300005328 Ga0070676_10048903 Ga0070676_100489033 224
104 3300005336 Ga0070680_100027383 Ga0070680_1000273832 224
105 3300005347 Ga0070668_100031068 Ga0070668_1000310682 224
106 3300005353 Ga0070669_100007871 Ga0070669_1000078714 224
107 3300005356 Ga0070674_100047953 Ga0070674_1000479531 224
108 3300005441 Ga0070700_100096711 Ga0070700_1000967112 224
109 3300005457 Ga0070662_100020226 Ga0070662_1000202262 224
110 3300005543 Ga0070672_100001677 Ga0070672_10000167711 224
111 3300005546 Ga0070696_100000163 Ga0070696_1000001639 224
112 3300005719 Ga0068861_100003473 Ga0068861_1000034732 224
113 3300005840 Ga0068870_10097475 Ga0068870_100974752 224
114 3300005844 Ga0068862_100014149 Ga0068862_1000141493 224
115 3300006844 Ga0075428_100027680 Ga0075428_1000276805 224
116 3300006844 Ga0075428_100106132 Ga0075428_1001061322 224
117 3300006846 Ga0075430_100035071 Ga0075430_1000350712 224
118 3300006847 Ga0075431_100082727 Ga0075431_1000827272 224
119 3300006880 Ga0075429_100221446 Ga0075429_1002214462 224
120 3300009093 Ga0105240_10074376 Ga0105240_100743762 224
121 3300009093 Ga0105240_10113423 Ga0105240_101134236 224
122 3300009148 Ga0105243_10396920 Ga0105243_103969202 224
123 3300025907 Ga0207645_10000328 Ga0207645_100003287 224
124 3300025913 Ga0207695_10091504 Ga0207695_100915046 224
125 3300025917 Ga0207660_10165942 Ga0207660_101659422 224
126 3300025933 Ga0207706_10000476 Ga0207706_1000047637 224
127 3300025937 Ga0207669_10004888 Ga0207669_100048886 224
128 3300025940 Ga0207691_10005421 Ga0207691_100054219 224
129 3300025972 Ga0207668_10108000 Ga0207668_101080002 224
130 3300026089 Ga0207648_10000334 Ga0207648_1000033451 224
131 3300026116 Ga0207674_10023223 Ga0207674_100232235 224
132 3300026118 Ga0207675_100000130 Ga0207675_1000001306 224
133 3300027665 Ga0209983_1002207 Ga0209983_10022073 224
134 3300027682 Ga0209971_1000594 Ga0209971_10005949 224
135 3300027717 Ga0209998_10000549 Ga0209998_100005496 224
136 3300027876 Ga0209974_10000625 Ga0209974_100006254 224
137 3300028381 Ga0268264_10583295 Ga0268264_105832951 224
138 3300028800 Ga0265338_10080767 Ga0265338_100807672 224
139 3300031665 Ga0316575_10001388 Ga0316575_100013881 224
140 3300031711 Ga0265314_10059362 Ga0265314_100593622 224
141 3300032137 Ga0316585_10076230 Ga0316585_100762301 224
142 3300035119 Ga0373956_0088121 Ga0373956_0088121_542_1372 224
143 3300035172 Ga0373955_0116905 Ga0373955_0116905_330_1160 224
144 3300035398 Ga0316574_0023877 Ga0316574_0023877_497_1330 224
145 3300036712 Ga0316584_0023879 Ga0316584_0023879_712_1545 224
146 3300042123 Ga0450921_001912 Ga0450921_001912_419_1252 224
147 3300042133 Ga0450896_005133 Ga0450896_005133_653_1486 224
148 3300042876 Ga0451577_0035316 Ga0451577_0035316_3361_4197 224
149 3300044673 Ga0453683_0068643 Ga0453683_0068643_14_850 224
150 3300046690 Ga0495624_0045356 Ga0495624_0045356_1059_1886 224
151 3300048907 Ga0496104_0003006 Ga0496104_0003006_6196_7026 224
152 3300048908 Ga0496105_0000714 Ga0496105_0000714_15734_16564 224
153 3300048917 Ga0496114_0139585 Ga0496114_0139585_17_847 224
154 3300048918 Ga0496115_0036757 Ga0496115_0036757_1895_2725 224
155 3300050508 nmdc:mga09592_26930_c1 nmdc:mga09592_26930_c1_3152_3985 224
156 3300050509 nmdc:mga0qj67_37896_c1 nmdc:mga0qj67_37896_c1_1146_1979 224
157 3300050511 nmdc:mga08y16_285169_c1 nmdc:mga08y16_285169_c1_822_1655 224
158 3300006880 Ga0075429_100046002 Ga0075429_1000460021 225
159 3300028016 Ga0265354_1001371 Ga0265354_10013712 225
160 3300031665 Ga0316575_10034883 Ga0316575_100348832 225
161 3300031727 Ga0316576_10004964 Ga0316576_100049645 225
162 3300033545 Ga0316214_1004010 Ga0316214_10040102 225
163 3300035398 Ga0316574_0000055 Ga0316574_0000055_19873_20715 225
164 3300035398 Ga0316574_0196849 Ga0316574_0196849_408_1247 225
165 3300050508 nmdc:mga09592_38027_c1 nmdc:mga09592_38027_c1_1259_2092 225
166 3300031852 Ga0307410_10300372 Ga0307410_103003721 226
167 3300035398 Ga0316574_0258570 Ga0316574_0258570_39_881 226
168 3300005289 Ga0065704_10006867 Ga0065704_100068671 227
169 3300009093 Ga0105240_10195131 Ga0105240_101951313 227
170 3300031728 Ga0316578_10005533 Ga0316578_100055334 228
171 3300035398 Ga0316574_0008074 Ga0316574_0008074_3102_3950 228
172 3300044712 Ga0453684_0068059 Ga0453684_0068059_3155_3994 228
173 3300035398 Ga0316574_0009678 Ga0316574_0009678_1924_2775 229
174 3300036712 Ga0316584_0191273 Ga0316584_0191273_635_1486 229
175 3300032005 Ga0307411_10084026 Ga0307411_100840262 233
176 2162886007 SwRhRL2b_contig_1342129 SwRhRL2b_0736.00001780 240
177 3300048919 Ga0496116_0000019 Ga0496116_0000019_332433_333317 240
178 3300048924 Ga0496121_0000018 Ga0496121_0000018_200304_201188 240

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14805

THDPS_N_2

Tetrahydrodipicolinate N-succinyltransferase N-terminal

14

80

0.98

PF14602

Hexapep_2

Hexapeptide repeat of succinyl-transferase

168

203

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ect-assembly1.cif.gz_A crystal structure of the hexapeptide-repeat containing-acetyltransferase vca0836 from vibrio cholerae 0.9436 142 202
7ra4-assembly1.cif.gz_B-2 crystal structure of neisseria gonorrhoeae serine acetyltransferase (cyse) in complex with serine 0.942 144 202
4e6u-assembly1.cif.gz_A structure of lpxa from acinetobacter baumannii at 1.4a resolution (p63 form) 0.9357 144 202
3fww-assembly1.cif.gz_A the crystal structure of the bifunctional n-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase from yersinia pestis co92 0.9224 144 202
4hzc-assembly2.cif.gz_G crystal structure of serine acetyltransferase from brucella abortus strain s19 0.889 144 223
ID Description Score Start End Superfamily
3tk8C01 Mainly Alpha;Orthogonal Bundle;Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1;Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain 0.9821 20 87 1.10.166.10
6amyA01 Mainly Alpha;Orthogonal Bundle;Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1;Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain 0.9762 21 87 1.10.166.10
3tk8A01 Mainly Alpha;Orthogonal Bundle;Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1;Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain 0.9736 20 87 1.10.166.10
af_Q8CHW4_335_390_2.160.10.10 Mainly Beta;3 Solenoid;UDP N-Acetylglucosamine Acyltransferase; domain 1;Hexapeptide repeat proteins 0.945 144 176 2.160.10.10
3tk8C01 Mainly Alpha;Orthogonal Bundle;Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1;Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain 0.9413 20 87 1.10.166.10
ID Description Score Start End GO Terms
AF-F8XM92-F1-model_v4 deleted 0.9949 22 86
AF-J5KUP6-F1-model_v4 deleted 0.9931 22 73
AF-A0A3C0JJI7-F1-model_v4 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 0.9847 20 83 GO:0016740
AF-A0A7V0KRD9-F1-model_v4 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) 0.9817 21 76 GO:0008666
AF-A0A7X4ADN6-F1-model_v4 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 0.9814 150 240 GO:0016740

Feature Viewer

pLDDT pTM Quality
77.47 0.64 Medium
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Predicted Structure (AlphaFold2)

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