F273233

General Info

Members Datasets Scaffolds Average Seq Length
179 119 358 332

Family's Representative Sequence

Representative Sequence 3300005334|Ga0068869_100029219|Ga0068869_1000292197
Length 349
Sequence MTSFLRSDKSRPVAVWLFIVAALVMAMVVVGGATRLTDSGLSITEWKPVTGAVPPMSEMAWQAEFARYREIPQYKLVNRGMELAAFKSIYWWEWSHRLLGRLLGAAFALPFAYFLIRRQMPQRLVWRCAGLFGLGGLQGVVGWWMVASGLSKRISVAPERLAIHLGLAFALLGALVWTGLEAWAGPARQGMRSPWQRRTVMLVGLIYLQILLGALVAGNDAGLVYNDWPLMNGALIPEDYAGADLWATLAHSAGAVQLHHRLVAYLLTLVAIVLAWRAWRSQHLGCAAKVLAAAVGGVVVLQAGLGIATLMAGVPLWLGMLHQLTAAVVLITALALAWRVRRLQFSAVS

Samples

Sample ID Description Type Environment
1 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
2 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
3 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
4 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
34 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
35 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
36 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
60 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
63 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
64 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
70 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
71 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
72 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
73 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
74 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
75 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
76 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
77 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
78 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
79 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
80 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
81 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
82 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
83 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
84 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
87 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
88 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
89 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
90 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
91 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
94 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
95 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
96 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
97 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
98 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
99 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
100 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
101 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
102 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
103 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
104 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
105 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
106 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
107 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
108 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
109 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
110 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
111 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
112 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
113 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
114 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
115 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
116 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
117 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
118 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
119 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.97
Metatranscriptomes 0
Isolates 5.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.88
Nodule 0
Rhizoplane 2.23
Rhizosphere 69.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068869_100029219 3300005334 Bacteria 3861
2 Ga0055530_10002405 3300003791 Bacteria 12113
3 Ga0055531_10003691 3300003794 Bacteria 9640
4 Ga0065165_1006118 3300005262 Bacteria 6443
5 Ga0070683_100182863 3300005329 Bacteria 1990
6 Ga0070670_100000039 3300005331 Bacteria 152618
7 Ga0070661_100392311 3300005344 Bacteria 1096
8 Ga0070668_100001479 3300005347 Bacteria 16969
9 Ga0070668_100021058 3300005347 Bacteria 4927
10 Ga0070668_100032298 3300005347 Bacteria 3984
11 Ga0070668_100207250 3300005347 Bacteria 1611
12 Ga0070669_100105079 3300005353 Bacteria 2136
13 Ga0070669_100121705 3300005353 Bacteria 1992
14 Ga0070671_100000883 3300005355 Bacteria 21938
15 Ga0070671_100065472 3300005355 Bacteria 3027
16 Ga0070667_100001045 3300005367 Bacteria 25251
17 Ga0070667_100008535 3300005367 Bacteria 8493
18 Ga0070667_100013044 3300005367 Bacteria 6869
19 Ga0070667_100021042 3300005367 Bacteria 5419
20 Ga0070665_100000884 3300005548 Bacteria 38426
21 Ga0070665_100000934 3300005548 Bacteria 37393
22 Ga0070665_100067724 3300005548 Bacteria 3580
23 Ga0070664_100138002 3300005564 Bacteria 2145
24 Ga0068856_100075363 3300005614 Bacteria 3342
25 Ga0068859_100002334 3300005617 Bacteria 19296
26 Ga0068859_100179818 3300005617 Bacteria 2198
27 Ga0068864_100000462 3300005618 Bacteria 35199
28 Ga0068864_100122511 3300005618 Bacteria 2327
29 Ga0068863_100003412 3300005841 Bacteria 15670
30 Ga0068863_100027939 3300005841 Bacteria 5384
31 Ga0068863_100071760 3300005841 Bacteria 3276
32 Ga0068863_100210368 3300005841 Bacteria 1873
33 Ga0068863_100278825 3300005841 Bacteria 1619
34 Ga0068858_100004185 3300005842 Bacteria 14204
35 Ga0068858_100004750 3300005842 Bacteria 13300
36 Ga0068860_100000128 3300005843 Bacteria 122731
37 Ga0068860_100016334 3300005843 Bacteria 7237
38 Ga0068860_100038420 3300005843 Bacteria 4578
39 Ga0068862_100000121 3300005844 Bacteria 91849
40 Ga0068862_100025982 3300005844 Bacteria 4920
41 Ga0068862_100070184 3300005844 Bacteria 3024
42 Ga0075366_10145578 3300006195 Bacteria 1433
43 Ga0075430_100046370 3300006846 Bacteria 3671
44 Ga0097620_100002334 3300006931 Bacteria 19296
45 Ga0097620_100179812 3300006931 Bacteria 2198
46 Ga0105240_10130037 3300009093 Bacteria 3021
47 Ga0105247_10148312 3300009101 Bacteria 1543
48 Ga0105242_10204217 3300009176 Bacteria 1757
49 Ga0105248_10020081 3300009177 Bacteria 7400
50 Ga0105248_10025925 3300009177 Bacteria 6520
51 Ga0105248_10039628 3300009177 Bacteria 5279
52 Ga0105248_10131920 3300009177 Bacteria 2819
53 Ga0105248_10191812 3300009177 Bacteria 2302
54 Ga0105237_10329605 3300009545 Bacteria 1531
55 Ga0105249_10000890 3300009553 Bacteria 26461
56 Ga0105249_10035818 3300009553 Bacteria 4500
57 Ga0105239_10077052 3300010375 Bacteria 3668
58 Ga0163163_10085206 3300014325 Bacteria 3168
59 Ga0157379_10000697 3300014968 Bacteria 27269
60 Ga0157379_10040633 3300014968 Bacteria 4152
61 Ga0213876_10007215 3300021384 Bacteria 6058
62 Ga0209026_1000477 3300025250 Bacteria 30249
63 Ga0209758_1002231 3300025297 Bacteria 20133
64 Ga0209050_1000200 3300025298 Bacteria 134115
65 Ga0209257_1000225 3300025304 Bacteria 134023
66 Ga0209257_1000514 3300025304 Bacteria 67345
67 Ga0207695_10092456 3300025913 Bacteria 3036
68 Ga0207681_10008186 3300025923 Bacteria 6393
69 Ga0207681_10099967 3300025923 Bacteria 2090
70 Ga0207650_10000099 3300025925 Bacteria 113522
71 Ga0207644_10000460 3300025931 Bacteria 26333
72 Ga0207706_10018903 3300025933 Bacteria 6197
73 Ga0207711_10011455 3300025941 Bacteria 7372
74 Ga0207711_10011814 3300025941 Bacteria 7256
75 Ga0207711_10017747 3300025941 Bacteria 5912
76 Ga0207689_10021999 3300025942 Bacteria 5361
77 Ga0207712_10001219 3300025961 Bacteria 17744
78 Ga0207668_10000046 3300025972 Bacteria 102051
79 Ga0207668_10000465 3300025972 Bacteria 25478
80 Ga0207668_10001324 3300025972 Bacteria 14714
81 Ga0207668_10007342 3300025972 Bacteria 6551
82 Ga0207658_10000106 3300025986 Bacteria 90920
83 Ga0207658_10032953 3300025986 Bacteria 3692
84 Ga0207658_10041523 3300025986 Bacteria 3331
85 Ga0207703_10005081 3300026035 Bacteria 10642
86 Ga0207703_10029284 3300026035 Bacteria 4344
87 Ga0207702_10457332 3300026078 Bacteria 1239
88 Ga0207641_10001351 3300026088 Bacteria 24324
89 Ga0207641_10004383 3300026088 Bacteria 12236
90 Ga0207641_10012149 3300026088 Bacteria 7067
91 Ga0207641_10174348 3300026088 Bacteria 1965
92 Ga0207676_10000119 3300026095 Bacteria 69303
93 Ga0207676_10086420 3300026095 Bacteria 2562
94 Ga0209981_1000511 3300027378 Bacteria 4948
95 Ga0268266_10000636 3300028379 Bacteria 47724
96 Ga0268266_10008226 3300028379 Bacteria 9298
97 Ga0268265_10002082 3300028380 Bacteria 15603
98 Ga0268265_10071050 3300028380 Bacteria 2709
99 Ga0268265_10246247 3300028380 Bacteria 1580
100 Ga0268264_10000059 3300028381 Bacteria 306927
101 Ga0268264_10012918 3300028381 Bacteria 6865
102 Ga0307517_10063606 3300028786 Bacteria 3447
103 Ga0265327_10001144 3300031251 Bacteria 36241
104 Ga0307513_10000181 3300031456 Bacteria 91264
105 Ga0307513_10002130 3300031456 Bacteria 27783
106 Ga0307513_10007023 3300031456 Bacteria 14646
107 Ga0307516_10000004 3300031730 Bacteria 367451
108 Ga0307414_10021318 3300032004 Bacteria 4062
109 Ga0307414_10093069 3300032004 Bacteria 2246
110 Ga0373937_0341943 3300036401 Bacteria 1417
111 Ga0373925_0297570 3300037068 Bacteria 1302
112 Ga0395899_0000100 3300037312 Bacteria 151710
113 Ga0395900_0000009 3300037418 Bacteria 476249
114 Ga0395898_0011539 3300037466 Bacteria 9178
115 Ga0395898_0104765 3300037466 Bacteria 2713
116 Ga0395898_0646494 3300037466 Bacteria 1000
117 Ga0395905_0005766 3300037471 Bacteria 12587
118 Ga0395905_0018539 3300037471 Bacteria 6605
119 Ga0395905_0262189 3300037471 Bacteria 1613
120 Ga0395901_0000014 3300038443 Bacteria 375100
121 Ga0395901_0312821 3300038443 Bacteria 1626
122 Ga0436365_1469596 3300039437 Bacteria 4599
123 Ga0495637_0044054 3300046520 Bacteria 1902
124 Ga0495643_0007028 3300046522 Bacteria 7312
125 Ga0495654_0039737 3300046530 Bacteria 2348
126 Ga0495609_0005524 3300046538 Bacteria 6610
127 Ga0495597_0002060 3300046542 Bacteria 13412
128 Ga0495622_0005038 3300046557 Bacteria 6124
129 Ga0495668_0043169 3300046616 Bacteria 2509
130 Ga0495669_0000001 3300046684 Bacteria 291866
131 Ga0495669_0000114 3300046684 Bacteria 52644
132 Ga0495669_0070120 3300046684 Bacteria 1596
133 Ga0495624_0108215 3300046690 Bacteria 1710
134 Ga0495649_0000619 3300046694 Bacteria 29384
135 Ga0495677_0013604 3300047445 Bacteria 2962
136 Ga0495686_0015345 3300047472 Bacteria 5235
137 Ga0495602_0224346 3300048088 Bacteria 1416
138 Ga0496102_0115364 3300048905 Bacteria 2506
139 Ga0496108_0047746 3300048911 Bacteria 3579
140 Ga0496109_0030012 3300048912 Bacteria 4872
141 Ga0496112_0075747 3300048915 Bacteria 3327
142 Ga0496118_0004615 3300048921 Bacteria 16182
143 Ga0496121_0000009 3300048924 Bacteria 836971
144 Ga0496125_0001384 3300048928 Bacteria 35511
145 Ga0501047_0001192 3300049581 Bacteria 25737
146 nmdc:mga0k408_261685_c1 3300050493 Bacteria 1033
147 nmdc:mga0k408_3798_c1 3300050493 Bacteria 8002
148 nmdc:mga07m45_52059_c1 3300050496 Bacteria 2311
149 nmdc:mga0qj67_39800_c1 3300050509 Bacteria 3693
150 Ga0500635_0000054 3300053080 Bacteria 74486
151 Ga0500651_0021387 3300053093 Bacteria 4034
152 Ga0500566_0057206 3300053094 Bacteria 2215
153 Ga0500641_0004326 3300053096 Bacteria 5010
154 Ga0500555_002959 3300053103 Bacteria 4861
155 Ga0500562_001702 3300053108 Bacteria 5468
156 Ga0500562_016516 3300053108 Bacteria 1898
157 Ga0500569_000235 3300053109 Bacteria 8748
158 Ga0500595_001342 3300053119 Bacteria 13296
159 Ga0500597_120653 3300053120 Bacteria 1136
160 Ga0500607_104636 3300053121 Bacteria 1399
161 Ga0500658_0009120 3300053134 Bacteria 3662
162 Ga0500559_0052105 3300053136 Bacteria 1808
163 Ga0500573_0025038 3300053140 Bacteria 3432
164 Ga0500590_081265 3300053148 Bacteria 1591
165 Ga0500636_0022222 3300053177 Bacteria 3753
166 Ga0500637_0020350 3300053178 Bacteria 3592
167 Ga0500637_0107850 3300053178 Bacteria 1615
168 Ga0500625_055983 3300053729 Bacteria 1807
169 Ga0500645_005761 3300053730 Bacteria 4507
170 Ga0500596_000249 3300053735 Bacteria 9379
171 2643883114 2643221574 Bacteria 2789653
172 2644000065 2643221598 Bacteria 4578346
173 2644085090 2643221614 Bacteria 4260023
174 2644342642 2643221661 Bacteria 4267604
175 2644351991 2643221663 Bacteria 3425771
176 2644365942 2643221666 Bacteria 4265935
177 2644547617 2643221699 Bacteria 5731501
178 2644547815 2643221699 Bacteria 5731501
179 2941488352 2941485952 Bacteria 3591484
180 Ga0068869_100029219
181 Ga0055530_10002405
182 Ga0055531_10003691
183 Ga0065165_1006118
184 Ga0070683_100182863
185 Ga0070670_100000039
186 Ga0070661_100392311
187 Ga0070668_100001479
188 Ga0070668_100021058
189 Ga0070668_100032298
190 Ga0070668_100207250
191 Ga0070669_100105079
192 Ga0070669_100121705
193 Ga0070671_100000883
194 Ga0070671_100065472
195 Ga0070667_100001045
196 Ga0070667_100008535
197 Ga0070667_100013044
198 Ga0070667_100021042
199 Ga0070665_100000884
200 Ga0070665_100000934
201 Ga0070665_100067724
202 Ga0070664_100138002
203 Ga0068856_100075363
204 Ga0068859_100002334
205 Ga0068859_100179818
206 Ga0068864_100000462
207 Ga0068864_100122511
208 Ga0068863_100003412
209 Ga0068863_100027939
210 Ga0068863_100071760
211 Ga0068863_100210368
212 Ga0068863_100278825
213 Ga0068858_100004185
214 Ga0068858_100004750
215 Ga0068860_100000128
216 Ga0068860_100016334
217 Ga0068860_100038420
218 Ga0068862_100000121
219 Ga0068862_100025982
220 Ga0068862_100070184
221 Ga0075366_10145578
222 Ga0075430_100046370
223 Ga0097620_100002334
224 Ga0097620_100179812
225 Ga0105240_10130037
226 Ga0105247_10148312
227 Ga0105242_10204217
228 Ga0105248_10020081
229 Ga0105248_10025925
230 Ga0105248_10039628
231 Ga0105248_10131920
232 Ga0105248_10191812
233 Ga0105237_10329605
234 Ga0105249_10000890
235 Ga0105249_10035818
236 Ga0105239_10077052
237 Ga0163163_10085206
238 Ga0157379_10000697
239 Ga0157379_10040633
240 Ga0213876_10007215
241 Ga0209026_1000477
242 Ga0209758_1002231
243 Ga0209050_1000200
244 Ga0209257_1000225
245 Ga0209257_1000514
246 Ga0207695_10092456
247 Ga0207681_10008186
248 Ga0207681_10099967
249 Ga0207650_10000099
250 Ga0207644_10000460
251 Ga0207706_10018903
252 Ga0207711_10011455
253 Ga0207711_10011814
254 Ga0207711_10017747
255 Ga0207689_10021999
256 Ga0207712_10001219
257 Ga0207668_10000046
258 Ga0207668_10000465
259 Ga0207668_10001324
260 Ga0207668_10007342
261 Ga0207658_10000106
262 Ga0207658_10032953
263 Ga0207658_10041523
264 Ga0207703_10005081
265 Ga0207703_10029284
266 Ga0207702_10457332
267 Ga0207641_10001351
268 Ga0207641_10004383
269 Ga0207641_10012149
270 Ga0207641_10174348
271 Ga0207676_10000119
272 Ga0207676_10086420
273 Ga0209981_1000511
274 Ga0268266_10000636
275 Ga0268266_10008226
276 Ga0268265_10002082
277 Ga0268265_10071050
278 Ga0268265_10246247
279 Ga0268264_10000059
280 Ga0268264_10012918
281 Ga0307517_10063606
282 Ga0265327_10001144
283 Ga0307513_10000181
284 Ga0307513_10002130
285 Ga0307513_10007023
286 Ga0307516_10000004
287 Ga0307414_10021318
288 Ga0307414_10093069
289 Ga0373937_0341943
290 Ga0373925_0297570
291 Ga0395899_0000100
292 Ga0395900_0000009
293 Ga0395898_0011539
294 Ga0395898_0104765
295 Ga0395898_0646494
296 Ga0395905_0005766
297 Ga0395905_0018539
298 Ga0395905_0262189
299 Ga0395901_0000014
300 Ga0395901_0312821
301 Ga0436365_1469596
302 Ga0495637_0044054
303 Ga0495643_0007028
304 Ga0495654_0039737
305 Ga0495609_0005524
306 Ga0495597_0002060
307 Ga0495622_0005038
308 Ga0495668_0043169
309 Ga0495669_0000001
310 Ga0495669_0000114
311 Ga0495669_0070120
312 Ga0495624_0108215
313 Ga0495649_0000619
314 Ga0495677_0013604
315 Ga0495686_0015345
316 Ga0495602_0224346
317 Ga0496102_0115364
318 Ga0496108_0047746
319 Ga0496109_0030012
320 Ga0496112_0075747
321 Ga0496118_0004615
322 Ga0496121_0000009
323 Ga0496125_0001384
324 Ga0501047_0001192
325 nmdc:mga0k408_261685_c1
326 nmdc:mga0k408_3798_c1
327 nmdc:mga07m45_52059_c1
328 nmdc:mga0qj67_39800_c1
329 Ga0500635_0000054
330 Ga0500651_0021387
331 Ga0500566_0057206
332 Ga0500641_0004326
333 Ga0500555_002959
334 Ga0500562_001702
335 Ga0500562_016516
336 Ga0500569_000235
337 Ga0500595_001342
338 Ga0500597_120653
339 Ga0500607_104636
340 Ga0500658_0009120
341 Ga0500559_0052105
342 Ga0500573_0025038
343 Ga0500590_081265
344 Ga0500636_0022222
345 Ga0500637_0020350
346 Ga0500637_0107850
347 Ga0500625_055983
348 Ga0500645_005761
349 Ga0500596_000249
350 2643883114
351 2644000065
352 2644085090
353 2644342642
354 2644351991
355 2644365942
356 2644547617
357 2644547815
358 2941488352

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02628

COX15-CtaA

Cytochrome oxidase assembly protein

14

334

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8aw5-assembly1.cif.gz_A cryo-em structure of heme a synthase trimer from aquifex aeolicus 0.7071 12 341
8aw5-assembly1.cif.gz_A cryo-em structure of heme a synthase trimer from aquifex aeolicus 0.6912 12 341
6ied-assembly1.cif.gz_A crystal structure of heme a synthase from bacillus subtilis 0.6791 11 337
6ied-assembly1.cif.gz_A crystal structure of heme a synthase from bacillus subtilis 0.6372 11 337
3ddl-assembly1.cif.gz_A crystallographic structure of xanthorhodopsin, a light-driven ion pump with dual chromophore 0.4225 100 343
ID Description Score Start End Superfamily
af_A0A1D8PQI6_121_240_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.5696 196 337 1.20.950.20
af_K7KZX1_376_557_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.5611 13 218 1.20.120.1770
af_A0A1D8PQI6_121_240_1.20.950.20 Mainly Alpha;Up-down Bundle;Fumarate Reductase Cytochrome B subunit;Transmembrane di-heme cytochromes, Chain C 0.5585 196 337 1.20.950.20
af_Q9LYS9_197_382_2.60.120.200 Mainly Beta;Sandwich;Jelly Rolls; 0.5399 17 182 2.60.120.200
4dj9A02 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Alpha-catenin/vinculin-like 0.5296 196 344 1.20.120.230
ID Description Score Start End GO Terms
AF-A0A4V1UH90-F1-model_v4 Heme A synthase 0.9757 161 344 GO:0006784
GO:0016020
GO:0016653
GO:0046872
AF-A0A4V1UH90-F1-model_v4 Heme A synthase 0.9705 161 344 GO:0006784
GO:0016020
GO:0016653
GO:0046872
AF-J9E6Q5-F1-model_v4 Cytochrome oxidase assembly protein 0.9613 196 344 GO:0005743
GO:0006784
GO:0016653
GO:0046872
AF-A0A7C3D9X9-F1-model_v4 Heme A synthase 0.9552 55 338 GO:0006784
GO:0016020
GO:0016653
GO:0046872
AF-A0A379P6N3-F1-model_v4 deleted 0.9498 196 344

Map