F276362

General Info

Members Datasets Scaffolds Average Seq Length
180 135 360 505

Family's Representative Sequence

Representative Sequence 3300049772|Ga0501275_000077|Ga0501275_000077_3291_4892
Length 533
Sequence VPRVPRGWITIERDAIPASALEAIFVSNPLYDRLFAPLAGRPGACLHLEGDAALSGPGFLAIVHRSAAALRALGVRPGDRVALQVAKTPEALAIYGATVAAGAVLLPLNTAYTPAEVDAFVADATPRVLLVDPAKSDALSPVAARHGATLATLDAGGRGSFRDLCDAQSSDAVVQPRAEGDLAALLYTSGTTGRSKGAMLSQGNLLSNAATLADVWRFGPGDVLLHALPIFHTHGLFVACNVSLLSGAAMIFQPGFDLDAILRALPRATVLMGVPTFYTRLLGDASADGSRFDRDLVAHMRLFVSGSAPLLAETHVAFEARTGHRILERYGMTETNMNTSNPYDGERRAGTVGKPLPGVEVVVADTATRVPQPAGETGMVEVRGPNVFGGYWNLPEKTREDLRDDGFFITGDLGRFDDDGYLALVGRQKDLVITGGFNVYPKEVESVLDEQPGVLESAVIGVPHPDFGEAVFAVLVARPGERIDVDAIDAVLRECLARYKQPKGIAVIDALPRNAMGKVQKALLRERFGGRFG

Samples

Sample ID Description Type Environment
1 3300049772 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
17 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
18 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
19 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
20 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
21 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
22 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
23 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
28 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
29 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
30 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
31 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
46 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
47 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
48 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
49 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
50 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
51 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
52 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
53 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
54 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
55 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
56 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
57 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
58 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
59 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
62 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
63 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
64 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
65 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
66 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
67 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
68 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
69 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
70 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
71 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
72 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
73 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
74 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
75 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
76 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
77 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
78 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
79 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
80 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
81 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
89 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
90 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
91 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
92 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
93 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
94 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
95 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
97 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
98 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
99 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
100 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
101 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
102 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
103 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
104 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
105 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
106 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
107 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
108 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
109 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
110 2643221564 Mesorhizobium sp. Root157 Isolate Unclassified
111 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
112 2871495908 Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 Isolate Nodule
113 2876392853 Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 Isolate Nodule
114 2878760144 Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 Isolate Nodule
115 2878767105 Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 Isolate Nodule
116 2881161766 Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 Isolate Nodule
117 2903540706 Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 Isolate Nodule
118 2904659560 Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 Isolate Nodule
119 2906328253 Mesorhizobium sp. M1A.T.Ca.IN.004.03.1.1 Isolate Nodule
120 2924762789 Mesorhizobium sp. WSM4303 Isolate Unclassified
121 2937891427 Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1 Isolate Nodule
122 2937994558 Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 Isolate Nodule
123 2958165035 Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 Isolate Nodule
124 2961114664 Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 Isolate Nodule
125 2961163497 Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 Isolate Nodule
126 2965018300 Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 Isolate Nodule
127 2968110612 Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 Isolate Nodule
128 2968171901 Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 Isolate Nodule
129 2970554993 Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 Isolate Nodule
130 2977898635 Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 Isolate Nodule
131 2987659509 Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 Isolate Nodule
132 3004188549 Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 Isolate Nodule
133 3004334049 Mesorhizobium huakuii 583 Isolate Unclassified
134 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
135 8004312739 Mesorhizobium sp. M7A.F.Ca.MR.362.00.0.0 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85
Metatranscriptomes 0
Isolates 15

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.78
Nodule 12.22
Rhizoplane 7.78
Rhizosphere 56.67
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501275_000077 3300049772 Bacteria 9945
2 JGI25151J46595_10000307 3300003187 Bacteria 53542
3 Ga0055542_1000618 3300003762 Bacteria 30135
4 Ga0070666_10013785 3300005335 Bacteria 5135
5 Ga0070668_100000920 3300005347 Bacteria 20505
6 Ga0070669_100000270 3300005353 Bacteria 42327
7 Ga0070669_100007821 3300005353 Bacteria 7637
8 Ga0070675_100009737 3300005354 Bacteria 7489
9 Ga0070671_100000116 3300005355 Bacteria 51559
10 Ga0070671_100000363 3300005355 Bacteria 31295
11 Ga0070671_100009109 3300005355 Bacteria 7971
12 Ga0070674_100091599 3300005356 Bacteria 2196
13 Ga0070667_100001907 3300005367 Bacteria 18505
14 Ga0070667_100009807 3300005367 Bacteria 7938
15 Ga0070685_10010019 3300005466 Bacteria 4915
16 Ga0070672_100016852 3300005543 Bacteria 5242
17 Ga0068852_100027323 3300005616 Bacteria 4650
18 Ga0068859_100000675 3300005617 Bacteria 34217
19 Ga0068863_100001087 3300005841 Bacteria 27174
20 Ga0068858_100012819 3300005842 Bacteria 7904
21 Ga0068862_100016564 3300005844 Bacteria 6138
22 Ga0075368_10000606 3300006042 Bacteria 10828
23 Ga0075364_10000557 3300006051 Bacteria 19122
24 Ga0075364_10007252 3300006051 Bacteria 6573
25 Ga0075362_10000211 3300006177 Bacteria 16265
26 Ga0075367_10007586 3300006178 Bacteria 5567
27 Ga0075367_10074070 3300006178 Bacteria 2053
28 Ga0075366_10017195 3300006195 Bacteria 4160
29 Ga0075366_10028440 3300006195 Bacteria 3281
30 Ga0097620_100000675 3300006931 Bacteria 34217
31 Ga0105248_10001928 3300009177 Bacteria 23040
32 Ga0105248_10069230 3300009177 Bacteria 3962
33 Ga0105249_10055111 3300009553 Bacteria 3636
34 Ga0105249_10177365 3300009553 Bacteria 2070
35 Ga0105239_10045235 3300010375 Bacteria 4824
36 Ga0163163_10003102 3300014325 Bacteria 14079
37 Ga0163163_10008700 3300014325 Bacteria 9028
38 Ga0157379_10000171 3300014968 Bacteria 48687
39 Ga0213872_10000031 3300021361 Bacteria 139321
40 Ga0213872_10000107 3300021361 Bacteria 77234
41 Ga0213872_10006798 3300021361 Bacteria 5694
42 Ga0209758_1001436 3300025297 Bacteria 28156
43 Ga0209050_1011156 3300025298 Bacteria 4303
44 Ga0207680_10110903 3300025903 Bacteria 1779
45 Ga0207681_10000531 3300025923 Bacteria 26310
46 Ga0207644_10000191 3300025931 Bacteria 43874
47 Ga0207644_10005791 3300025931 Bacteria 8043
48 Ga0207644_10014543 3300025931 Bacteria 5266
49 Ga0207669_10071440 3300025937 Bacteria 2181
50 Ga0207691_10005211 3300025940 Bacteria 12552
51 Ga0207691_10106863 3300025940 Bacteria 2492
52 Ga0207711_10001364 3300025941 Bacteria 23045
53 Ga0207668_10000339 3300025972 Bacteria 30296
54 Ga0207658_10000344 3300025986 Bacteria 46055
55 Ga0207639_10183673 3300026041 Bacteria 1781
56 Ga0207641_10007203 3300026088 Bacteria 9272
57 Ga0207674_10014227 3300026116 Bacteria 8792
58 Ga0207675_100100510 3300026118 Bacteria 2725
59 Ga0207683_10029794 3300026121 Bacteria 4726
60 Ga0209813_10000550 3300027866 Bacteria 8855
61 Ga0265338_10065363 3300028800 Bacteria 3156
62 Ga0265327_10004146 3300031251 Bacteria 13077
63 Ga0265316_10026328 3300031344 Bacteria 4839
64 Ga0373943_0050692 3300035170 Bacteria 2041
65 Ga0316574_0000278 3300035398 Bacteria 19095
66 Ga0395900_0307007 3300037418 Bacteria 1571
67 Ga0395905_0056433 3300037471 Bacteria 3674
68 Ga0395905_0114658 3300037471 Bacteria 2532
69 Ga0395905_0217597 3300037471 Bacteria 1788
70 Ga0395901_0123459 3300038443 Bacteria 2721
71 Ga0436365_0408484 3300039437 Bacteria 6181
72 Ga0436361_0140034 3300039447 Bacteria 6089
73 Ga0436361_0913791 3300039447 Bacteria 99691
74 Ga0436361_0968908 3300039447 Bacteria 25233
75 Ga0439436_0001299 3300041404 Bacteria 7149
76 Ga0450920_000481 3300042122 Bacteria 6282
77 Ga0439434_0012811 3300042435 Bacteria 2485
78 Ga0451577_0023207 3300042876 Bacteria 5660
79 Ga0453684_0000006 3300044712 Bacteria 1364191
80 Ga0466967_0031965 3300045976 Bacteria 4439
81 Ga0495621_0005989 3300046539 Bacteria 3527
82 Ga0495625_0060030 3300046660 Bacteria 2695
83 Ga0495687_042219 3300047443 Bacteria 1995
84 Ga0496102_0055665 3300048905 Bacteria 3607
85 Ga0496102_0129011 3300048905 Bacteria 2365
86 Ga0496103_0115005 3300048906 Bacteria 1711
87 Ga0496104_0026113 3300048907 Bacteria 5388
88 Ga0496105_0006864 3300048908 Bacteria 8761
89 Ga0496105_0079254 3300048908 Bacteria 2712
90 Ga0496106_0003329 3300048909 Bacteria 11976
91 Ga0496107_0000159 3300048910 Bacteria 34333
92 Ga0496108_0002404 3300048911 Bacteria 14970
93 Ga0496109_0005388 3300048912 Bacteria 10696
94 Ga0496112_0005301 3300048915 Bacteria 11123
95 Ga0496112_0019754 3300048915 Bacteria 6369
96 Ga0496113_0002494 3300048916 Bacteria 10721
97 Ga0496115_0006114 3300048918 Bacteria 8799
98 Ga0496118_0055238 3300048921 Bacteria 2999
99 Ga0496119_0001636 3300048922 Bacteria 26397
100 Ga0496120_0056864 3300048923 Bacteria 2205
101 Ga0496122_0001189 3300048925 Bacteria 44564
102 Ga0496123_0001203 3300048926 Bacteria 37856
103 Ga0501032_0010605 3300049569 Bacteria 6635
104 Ga0501032_0102856 3300049569 Bacteria 1893
105 Ga0501033_0007780 3300049570 Bacteria 8302
106 Ga0501033_0013355 3300049570 Bacteria 6258
107 Ga0501033_0056975 3300049570 Bacteria 2888
108 Ga0501034_0062549 3300049571 Bacteria 3738
109 Ga0501034_0291463 3300049571 Bacteria 1570
110 Ga0501037_0014117 3300049573 Bacteria 5884
111 Ga0501038_0123651 3300049574 Bacteria 2131
112 Ga0501043_0000055 3300049579 Bacteria 105522
113 Ga0501043_0007417 3300049579 Bacteria 8704
114 Ga0501047_0000342 3300049581 Bacteria 53140
115 Ga0501047_0007509 3300049581 Bacteria 10260
116 Ga0501047_0008166 3300049581 Bacteria 9886
117 Ga0501069_0000071 3300049585 Bacteria 51245
118 Ga0501070_0000747 3300049586 Bacteria 29640
119 Ga0501070_0003687 3300049586 Bacteria 13238
120 Ga0501071_0082702 3300049587 Bacteria 2351
121 Ga0501073_0031267 3300049589 Bacteria 3798
122 Ga0501073_0091836 3300049589 Bacteria 2110
123 Ga0501074_0000120 3300049590 Bacteria 39864
124 Ga0501074_0023878 3300049590 Bacteria 4444
125 Ga0501080_0007698 3300049742 Bacteria 9735
126 Ga0501080_0008509 3300049742 Bacteria 9303
127 Ga0501083_0000647 3300049744 Bacteria 22538
128 Ga0501035_0000183 3300049822 Bacteria 76563
129 Ga0501035_0002488 3300049822 Bacteria 18002
130 Ga0501035_0003478 3300049822 Bacteria 15066
131 Ga0501044_0000009 3300049823 Bacteria 270072
132 Ga0501044_0000346 3300049823 Bacteria 58137
133 Ga0501044_0004843 3300049823 Bacteria 15052
134 Ga0501044_0183070 3300049823 Bacteria 2061
135 nmdc:mga03683_3660_c1 3300050489 Bacteria 5000
136 nmdc:mga03683_41_c1 3300050489 Bacteria 60927
137 nmdc:mga03n38_833_c1 3300050490 Bacteria 8249
138 nmdc:mga00v17_131915_c1 3300050491 Bacteria 1597
139 nmdc:mga00v17_1621_c1 3300050491 Bacteria 11764
140 nmdc:mga00v17_5460_c1 3300050491 Bacteria 6696
141 nmdc:mga00v17_8924_c1 3300050491 Bacteria 5409
142 nmdc:mga0k408_2730_c1 3300050493 Bacteria 9376
143 nmdc:mga06z11_597_c1 3300050494 Bacteria 13187
144 nmdc:mga04h51_111_c1 3300050495 Bacteria 24272
145 nmdc:mga07m45_16_c1 3300050496 Bacteria 151695
146 nmdc:mga07m45_32563_c1 3300050496 Bacteria 2891
147 nmdc:mga0sz30_119_c1 3300050516 Bacteria 29121
148 Ga0500556_0000026 3300053104 Bacteria 166874
149 Ga0500556_0000537 3300053104 Bacteria 25852
150 Ga0500562_019285 3300053108 Bacteria 1764
151 Ga0500595_000504 3300053119 Bacteria 23584
152 Ga0500607_028950 3300053121 Bacteria 3062
153 Ga0500645_010863 3300053730 Bacteria 2994
154 2643838562 2643221564 Bacteria 4193379
155 2852683810 2852680915 Bacteria 4100189
156 2871500856 2871495908 Bacteria 6935695
157 2871502670 2871495908 Bacteria 6935695
158 2876397260 2876392853 Bacteria 6660880
159 2878766562 2878760144 Bacteria 6823465
160 2878773758 2878767105 Bacteria 6898628
161 2881164758 2881161766 Bacteria 7127907
162 2903547711 2903540706 Bacteria 7062119
163 2904664014 2904659560 Bacteria 6685615
164 2906334959 2906328253 Bacteria 6585166
165 2924762990 2924762789 Bacteria 6561353
166 2937894852 2937891427 Bacteria 6357007
167 2938001587 2937994558 Bacteria 7036190
168 2958171741 2958165035 Bacteria 6906348
169 2961118846 2961114664 Bacteria 6680456
170 2961170182 2961163497 Bacteria 6901077
171 2965024933 2965018300 Bacteria 6883036
172 2968115153 2968110612 Bacteria 6814636
173 2968178574 2968171901 Bacteria 6894245
174 2970561419 2970554993 Bacteria 6814252
175 2977904093 2977898635 Bacteria 6675551
176 2987666423 2987659509 Bacteria 6966464
177 3004195429 3004188549 Bacteria 6952365
178 3004337251 3004334049 Bacteria 8449246
179 8001847931 8001845381 Bacteria 5804942
180 8004313364 8004312739 Bacteria 7444653
181 Ga0501275_000077
182 JGI25151J46595_10000307
183 Ga0055542_1000618
184 Ga0070666_10013785
185 Ga0070668_100000920
186 Ga0070669_100000270
187 Ga0070669_100007821
188 Ga0070675_100009737
189 Ga0070671_100000116
190 Ga0070671_100000363
191 Ga0070671_100009109
192 Ga0070674_100091599
193 Ga0070667_100001907
194 Ga0070667_100009807
195 Ga0070685_10010019
196 Ga0070672_100016852
197 Ga0068852_100027323
198 Ga0068859_100000675
199 Ga0068863_100001087
200 Ga0068858_100012819
201 Ga0068862_100016564
202 Ga0075368_10000606
203 Ga0075364_10000557
204 Ga0075364_10007252
205 Ga0075362_10000211
206 Ga0075367_10007586
207 Ga0075367_10074070
208 Ga0075366_10017195
209 Ga0075366_10028440
210 Ga0097620_100000675
211 Ga0105248_10001928
212 Ga0105248_10069230
213 Ga0105249_10055111
214 Ga0105249_10177365
215 Ga0105239_10045235
216 Ga0163163_10003102
217 Ga0163163_10008700
218 Ga0157379_10000171
219 Ga0213872_10000031
220 Ga0213872_10000107
221 Ga0213872_10006798
222 Ga0209758_1001436
223 Ga0209050_1011156
224 Ga0207680_10110903
225 Ga0207681_10000531
226 Ga0207644_10000191
227 Ga0207644_10005791
228 Ga0207644_10014543
229 Ga0207669_10071440
230 Ga0207691_10005211
231 Ga0207691_10106863
232 Ga0207711_10001364
233 Ga0207668_10000339
234 Ga0207658_10000344
235 Ga0207639_10183673
236 Ga0207641_10007203
237 Ga0207674_10014227
238 Ga0207675_100100510
239 Ga0207683_10029794
240 Ga0209813_10000550
241 Ga0265338_10065363
242 Ga0265327_10004146
243 Ga0265316_10026328
244 Ga0373943_0050692
245 Ga0316574_0000278
246 Ga0395900_0307007
247 Ga0395905_0056433
248 Ga0395905_0114658
249 Ga0395905_0217597
250 Ga0395901_0123459
251 Ga0436365_0408484
252 Ga0436361_0140034
253 Ga0436361_0913791
254 Ga0436361_0968908
255 Ga0439436_0001299
256 Ga0450920_000481
257 Ga0439434_0012811
258 Ga0451577_0023207
259 Ga0453684_0000006
260 Ga0466967_0031965
261 Ga0495621_0005989
262 Ga0495625_0060030
263 Ga0495687_042219
264 Ga0496102_0055665
265 Ga0496102_0129011
266 Ga0496103_0115005
267 Ga0496104_0026113
268 Ga0496105_0006864
269 Ga0496105_0079254
270 Ga0496106_0003329
271 Ga0496107_0000159
272 Ga0496108_0002404
273 Ga0496109_0005388
274 Ga0496112_0005301
275 Ga0496112_0019754
276 Ga0496113_0002494
277 Ga0496115_0006114
278 Ga0496118_0055238
279 Ga0496119_0001636
280 Ga0496120_0056864
281 Ga0496122_0001189
282 Ga0496123_0001203
283 Ga0501032_0010605
284 Ga0501032_0102856
285 Ga0501033_0007780
286 Ga0501033_0013355
287 Ga0501033_0056975
288 Ga0501034_0062549
289 Ga0501034_0291463
290 Ga0501037_0014117
291 Ga0501038_0123651
292 Ga0501043_0000055
293 Ga0501043_0007417
294 Ga0501047_0000342
295 Ga0501047_0007509
296 Ga0501047_0008166
297 Ga0501069_0000071
298 Ga0501070_0000747
299 Ga0501070_0003687
300 Ga0501071_0082702
301 Ga0501073_0031267
302 Ga0501073_0091836
303 Ga0501074_0000120
304 Ga0501074_0023878
305 Ga0501080_0007698
306 Ga0501080_0008509
307 Ga0501083_0000647
308 Ga0501035_0000183
309 Ga0501035_0002488
310 Ga0501035_0003478
311 Ga0501044_0000009
312 Ga0501044_0000346
313 Ga0501044_0004843
314 Ga0501044_0183070
315 nmdc:mga03683_3660_c1
316 nmdc:mga03683_41_c1
317 nmdc:mga03n38_833_c1
318 nmdc:mga00v17_131915_c1
319 nmdc:mga00v17_1621_c1
320 nmdc:mga00v17_5460_c1
321 nmdc:mga00v17_8924_c1
322 nmdc:mga0k408_2730_c1
323 nmdc:mga06z11_597_c1
324 nmdc:mga04h51_111_c1
325 nmdc:mga07m45_16_c1
326 nmdc:mga07m45_32563_c1
327 nmdc:mga0sz30_119_c1
328 Ga0500556_0000026
329 Ga0500556_0000537
330 Ga0500562_019285
331 Ga0500595_000504
332 Ga0500607_028950
333 Ga0500645_010863
334 2643838562
335 2852683810
336 2871500856
337 2871502670
338 2876397260
339 2878766562
340 2878773758
341 2881164758
342 2903547711
343 2904664014
344 2906334959
345 2924762990
346 2937894852
347 2938001587
348 2958171741
349 2961118846
350 2961170182
351 2965024933
352 2968115153
353 2968178574
354 2970561419
355 2977904093
356 2987666423
357 3004195429
358 3004337251
359 8001847931
360 8004313364

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

443

518

0.96

PF00501

AMP-binding

AMP-binding enzyme

41

392

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x8g-assembly2.cif.gz_D binary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with its product analogue osb-ncoa at 1.90 angstrom 0.9249 1 495
5x8f-assembly1.cif.gz_A ternary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with amp and its product analogue osb-ncoa at 1.76 angstrom 0.9246 1 493
6iyk-assembly1.cif.gz_A the structure of ente with 2-nitrobenzoyl adenylate analog 0.9233 5 481
5bsv-assembly1.cif.gz_A crystal structure of 4-coumarate:coa ligase complexed with feruloyl adenylate 0.918 3 496
6iyl-assembly2.cif.gz_B the structure of ente with 3-cyanobenzoyl adenylate analog 0.9145 5 495
ID Description Score Start End Superfamily
4futA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9835 5 396 3.40.50.12780
af_P31552_422_517_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9833 399 493 3.30.300.30
4futA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9783 5 396 3.40.50.12780
af_P96843_409_507_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9735 399 496 3.30.300.30
af_Q9SS00_444_572_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9691 399 496 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A354VYQ4-F1-model_v4 deleted 0.9881 199 360
AF-A0A354VYQ4-F1-model_v4 deleted 0.9761 199 360
AF-A0A2E4XRB8-F1-model_v4 AMP-binding enzyme C-terminal domain-containing protein 0.972 401 501 GO:0006631
GO:0031956
AF-A0A7K0MYV2-F1-model_v4 Fatty acid--CoA ligase family protein 0.9643 398 496 GO:0006631
GO:0031956
AF-A0A522AV37-F1-model_v4 AMP-dependent synthetase 0.9618 405 502 GO:0016874

Map