F276774
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 181 | 130 | 177 | 274 |
Family's Representative Sequence
| Representative Sequence | 3300005336|Ga0070680_100001145|Ga0070680_1000011459 |
| Length | 291 |
| Sequence | MSQGRVGHTEVSGGRIAFQGELGANSHEACMAAFPELEPVPHATFEDAFEAVKSGDCQLGMIPVENSVAGRVADVHHLLPSSGLTIIGERFKPIHFQLMANPGATLETIDTVASMPIALAQCRKAIRRLKLKTEGVGDTAGAARMLSQNPDPTRAAISPALAAEIYGLEILARDIEDEHHNTTRFLIMTADKAPPAPPFTEPCITSFVFRVRNLPAALYKAMGGFATNGVNISKLESYMENGAWTATFFYAEADGRPEDRGLALAFDELRFFSDEFKVLGVYPADPFRTRG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221598 | Phenylobacterium sp. Root700 | Isolate | Unclassified |
| 2 | 2643221614 | Phenylobacterium sp. Root77 | Isolate | Unclassified |
| 3 | 2643221661 | Phenylobacterium sp. Root1277 | Isolate | Unclassified |
| 4 | 2643221666 | Phenylobacterium sp. Root1290 | Isolate | Unclassified |
| 5 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 6 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 7 | 3300004625 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 | Metagenome | Endosphere |
| 8 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 9 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 11 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 20 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 21 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 23 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 24 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 25 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 26 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 27 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 28 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 29 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 30 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 31 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 33 | 3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Metagenome | Rhizosphere |
| 34 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Metagenome | Rhizosphere |
| 38 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 43 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 44 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 45 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 46 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 48 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 73 | 3300027378 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300027512 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300027543 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300027665 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 81 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 82 | 3300030521 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM | Metagenome | Unclassified |
| 83 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 84 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 85 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 86 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 87 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 88 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 89 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 90 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 91 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 92 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 93 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 94 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 95 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 96 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 97 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 98 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 99 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 100 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 101 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 102 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 103 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 104 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 105 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046689 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 113 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 114 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 115 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 116 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 121 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 123 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 124 | 3300053087 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere | Metagenome | Endosphere |
| 125 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 126 | 3300053103 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere | Metagenome | Endosphere |
| 127 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 128 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 129 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 130 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.79 |
| Metatranscriptomes | 0 |
| Isolates | 2.21 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 13.81 |
| Nodule | 0.55 |
| Rhizoplane | 1.1 |
| Rhizosphere | 76.8 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 7.73 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0055530_10004402 | 3300003791 | Bacteria | 7262 |
| 2 | Ga0055531_10003745 | 3300003794 | Bacteria | 9552 |
| 3 | Ga0055543_1004910 | 3300004625 | Bacteria | 3526 |
| 4 | Ga0065165_1001513 | 3300005262 | Bacteria | 24537 |
| 5 | Ga0070670_100238037 | 3300005331 | Bacteria | 1585 |
| 6 | Ga0068869_100238843 | 3300005334 | Bacteria | 1447 |
| 7 | Ga0070680_100001145 | 3300005336 | Bacteria | 19023 |
| 8 | Ga0070680_100003915 | 3300005336 | Bacteria | 11132 |
| 9 | Ga0070691_10039731 | 3300005341 | Bacteria | 2223 |
| 10 | Ga0070668_100004828 | 3300005347 | Bacteria | 9994 |
| 11 | Ga0070669_100438500 | 3300005353 | Bacteria | 1075 |
| 12 | Ga0070671_100004946 | 3300005355 | Bacteria | 10603 |
| 13 | Ga0070659_100000209 | 3300005366 | Bacteria | 45573 |
| 14 | Ga0070659_100010008 | 3300005366 | Bacteria | 6978 |
| 15 | Ga0070667_100010146 | 3300005367 | Bacteria | 7791 |
| 16 | Ga0070681_10006474 | 3300005458 | Bacteria | 11400 |
| 17 | Ga0070681_10122027 | 3300005458 | Bacteria | 2539 |
| 18 | Ga0070679_100191262 | 3300005530 | Bacteria | 2015 |
| 19 | Ga0068853_100002965 | 3300005539 | Bacteria | 12924 |
| 20 | Ga0068853_100196290 | 3300005539 | Bacteria | 1836 |
| 21 | Ga0068853_100213815 | 3300005539 | Bacteria | 1758 |
| 22 | Ga0070665_100023633 | 3300005548 | Bacteria | 6188 |
| 23 | Ga0068855_100020586 | 3300005563 | Bacteria | 7911 |
| 24 | Ga0068855_100043218 | 3300005563 | Bacteria | 5338 |
| 25 | Ga0068855_100312950 | 3300005563 | Bacteria | 1737 |
| 26 | Ga0068855_100320811 | 3300005563 | Bacteria | 1712 |
| 27 | Ga0068852_100141879 | 3300005616 | Bacteria | 2224 |
| 28 | Ga0068859_100000930 | 3300005617 | Bacteria | 29992 |
| 29 | Ga0068859_100027008 | 3300005617 | Bacteria | 5758 |
| 30 | Ga0068864_100140006 | 3300005618 | Bacteria | 2182 |
| 31 | Ga0068861_100029832 | 3300005719 | Bacteria | 3993 |
| 32 | Ga0068861_100104121 | 3300005719 | Bacteria | 2263 |
| 33 | Ga0068863_100001315 | 3300005841 | Bacteria | 24750 |
| 34 | Ga0068858_100002906 | 3300005842 | Bacteria | 17239 |
| 35 | Ga0068860_100002644 | 3300005843 | Bacteria | 18639 |
| 36 | Ga0068865_100002232 | 3300006881 | Bacteria | 11408 |
| 37 | Ga0097620_100000930 | 3300006931 | Bacteria | 29992 |
| 38 | Ga0097620_100027009 | 3300006931 | Bacteria | 5758 |
| 39 | Ga0099794_10033413 | 3300007265 | Bacteria | 2419 |
| 40 | Ga0099795_10061258 | 3300007788 | Bacteria | 1397 |
| 41 | Ga0105240_10024293 | 3300009093 | Bacteria | 7995 |
| 42 | Ga0105240_10025114 | 3300009093 | Bacteria | 7839 |
| 43 | Ga0105240_10181822 | 3300009093 | Bacteria | 2480 |
| 44 | Ga0105248_10003956 | 3300009177 | Bacteria | 16383 |
| 45 | Ga0105248_10004562 | 3300009177 | Bacteria | 15336 |
| 46 | Ga0105238_10113831 | 3300009551 | Bacteria | 2685 |
| 47 | Ga0099796_10029942 | 3300010159 | Bacteria | 1761 |
| 48 | Ga0157370_10281165 | 3300013104 | Bacteria | 1538 |
| 49 | Ga0157372_10114757 | 3300013307 | Bacteria | 3088 |
| 50 | Ga0163163_10002788 | 3300014325 | Bacteria | 14762 |
| 51 | Ga0157379_10009103 | 3300014968 | Bacteria | 8650 |
| 52 | Ga0213872_10004940 | 3300021361 | Bacteria | 6934 |
| 53 | Ga0209026_1010403 | 3300025250 | Bacteria | 1736 |
| 54 | Ga0209026_1016023 | 3300025250 | Bacteria | 1220 |
| 55 | Ga0209148_1011804 | 3300025254 | Bacteria | 1614 |
| 56 | Ga0209758_1000894 | 3300025297 | Bacteria | 40579 |
| 57 | Ga0209050_1000173 | 3300025298 | Bacteria | 149800 |
| 58 | Ga0209257_1000196 | 3300025304 | Bacteria | 149656 |
| 59 | Ga0209257_1002949 | 3300025304 | Bacteria | 15613 |
| 60 | Ga0207705_10000600 | 3300025909 | Bacteria | 30156 |
| 61 | Ga0207707_10245854 | 3300025912 | Bacteria | 1554 |
| 62 | Ga0207695_10002305 | 3300025913 | Bacteria | 28454 |
| 63 | Ga0207695_10007614 | 3300025913 | Bacteria | 13721 |
| 64 | Ga0207695_10046702 | 3300025913 | Bacteria | 4588 |
| 65 | Ga0207660_10004147 | 3300025917 | Bacteria | 9428 |
| 66 | Ga0207660_10007574 | 3300025917 | Bacteria | 7028 |
| 67 | Ga0207660_10075571 | 3300025917 | Bacteria | 2461 |
| 68 | Ga0207657_10000381 | 3300025919 | Bacteria | 46762 |
| 69 | Ga0207657_10022673 | 3300025919 | Bacteria | 5867 |
| 70 | Ga0207649_10280294 | 3300025920 | Bacteria | 1212 |
| 71 | Ga0207652_10001952 | 3300025921 | Bacteria | 17849 |
| 72 | Ga0207681_10003889 | 3300025923 | Bacteria | 9273 |
| 73 | Ga0207681_10083067 | 3300025923 | Bacteria | 2266 |
| 74 | Ga0207681_10231498 | 3300025923 | Bacteria | 1434 |
| 75 | Ga0207650_10251657 | 3300025925 | Bacteria | 1430 |
| 76 | Ga0207644_10000907 | 3300025931 | Bacteria | 18778 |
| 77 | Ga0207690_10000116 | 3300025932 | Bacteria | 65776 |
| 78 | Ga0207686_10082393 | 3300025934 | Bacteria | 2103 |
| 79 | Ga0207711_10002809 | 3300025941 | Bacteria | 15313 |
| 80 | Ga0207711_10043457 | 3300025941 | Bacteria | 3833 |
| 81 | Ga0207689_10235129 | 3300025942 | Bacteria | 1515 |
| 82 | Ga0207667_10010093 | 3300025949 | Bacteria | 11068 |
| 83 | Ga0207667_10125062 | 3300025949 | Bacteria | 2648 |
| 84 | Ga0207667_10235441 | 3300025949 | Bacteria | 1874 |
| 85 | Ga0207668_10003904 | 3300025972 | Bacteria | 8786 |
| 86 | Ga0207668_10035390 | 3300025972 | Bacteria | 3324 |
| 87 | Ga0207658_10011078 | 3300025986 | Bacteria | 6141 |
| 88 | Ga0207658_10076070 | 3300025986 | Bacteria | 2556 |
| 89 | Ga0207658_10357513 | 3300025986 | Bacteria | 1273 |
| 90 | Ga0207703_10005676 | 3300026035 | Bacteria | 10018 |
| 91 | Ga0207703_10103203 | 3300026035 | Bacteria | 2420 |
| 92 | Ga0207639_10020280 | 3300026041 | Bacteria | 4756 |
| 93 | Ga0207702_10618015 | 3300026078 | Bacteria | 1064 |
| 94 | Ga0207641_10007794 | 3300026088 | Bacteria | 8898 |
| 95 | Ga0207676_10094866 | 3300026095 | Bacteria | 2459 |
| 96 | Ga0207675_100076280 | 3300026118 | Bacteria | 3139 |
| 97 | Ga0207675_100360684 | 3300026118 | Bacteria | 1426 |
| 98 | Ga0207698_10021618 | 3300026142 | Bacteria | 4454 |
| 99 | Ga0207698_10323710 | 3300026142 | Bacteria | 1445 |
| 100 | Ga0209281_1012733 | 3300027111 | Bacteria | 1836 |
| 101 | Ga0209981_1000672 | 3300027378 | Bacteria | 4320 |
| 102 | Ga0209179_1033739 | 3300027512 | Bacteria | 1059 |
| 103 | Ga0209999_1023613 | 3300027543 | Bacteria | 1133 |
| 104 | Ga0209983_1000897 | 3300027665 | Bacteria | 6552 |
| 105 | Ga0209588_1008735 | 3300027671 | Bacteria | 3011 |
| 106 | Ga0268266_10000003 | 3300028379 | Bacteria | 1701703 |
| 107 | Ga0268266_10169313 | 3300028379 | Bacteria | 1982 |
| 108 | Ga0268264_10016726 | 3300028381 | Bacteria | 6004 |
| 109 | Ga0307517_10035278 | 3300028786 | Bacteria | 5668 |
| 110 | Ga0265338_10021562 | 3300028800 | Bacteria | 6712 |
| 111 | Ga0307511_10062646 | 3300030521 | Bacteria | 2820 |
| 112 | Ga0265327_10000130 | 3300031251 | Bacteria | 165066 |
| 113 | Ga0265327_10025444 | 3300031251 | Bacteria | 3450 |
| 114 | Ga0307513_10000077 | 3300031456 | Bacteria | 134167 |
| 115 | Ga0307513_10062963 | 3300031456 | Bacteria | 3917 |
| 116 | Ga0265314_10074169 | 3300031711 | Bacteria | 2267 |
| 117 | Ga0307411_10055614 | 3300032005 | Bacteria | 2604 |
| 118 | Ga0307510_10016479 | 3300033180 | Bacteria | 8722 |
| 119 | Ga0307510_10059914 | 3300033180 | Bacteria | 3924 |
| 120 | Ga0373936_0002003 | 3300035113 | Bacteria | 7543 |
| 121 | Ga0373935_0078297 | 3300035692 | Bacteria | 2144 |
| 122 | Ga0373927_0000472 | 3300035695 | Bacteria | 30834 |
| 123 | Ga0373925_0000003 | 3300037068 | Bacteria | 362401 |
| 124 | Ga0395899_0000498 | 3300037312 | Bacteria | 43627 |
| 125 | Ga0395900_0000008 | 3300037418 | Bacteria | 480459 |
| 126 | Ga0395900_0381901 | 3300037418 | Bacteria | 1376 |
| 127 | Ga0395898_0093522 | 3300037466 | Bacteria | 2889 |
| 128 | Ga0395905_0001355 | 3300037471 | Bacteria | 29823 |
| 129 | Ga0395905_0015600 | 3300037471 | Bacteria | 7218 |
| 130 | Ga0395905_0124369 | 3300037471 | Bacteria | 2425 |
| 131 | Ga0395905_0692009 | 3300037471 | Bacteria | 922 |
| 132 | Ga0395901_0000008 | 3300038443 | Bacteria | 495962 |
| 133 | Ga0436365_0187494 | 3300039437 | Bacteria | 67801 |
| 134 | Ga0436360_0181248 | 3300039438 | Bacteria | 1730 |
| 135 | Ga0436361_0314376 | 3300039447 | Bacteria | 17837 |
| 136 | Ga0439431_0020501 | 3300041997 | Bacteria | 1580 |
| 137 | Ga0466972_0065310 | 3300044658 | Bacteria | 1741 |
| 138 | Ga0466966_0292237 | 3300044684 | Bacteria | 980 |
| 139 | Ga0466961_0320825 | 3300044693 | Bacteria | 945 |
| 140 | Ga0466957_0235516 | 3300044842 | Bacteria | 1213 |
| 141 | Ga0495650_0023117 | 3300046471 | Bacteria | 2966 |
| 142 | Ga0495594_0064410 | 3300046499 | Bacteria | 2032 |
| 143 | Ga0495645_0107509 | 3300046543 | Bacteria | 1977 |
| 144 | Ga0495668_0012730 | 3300046616 | Bacteria | 4983 |
| 145 | Ga0495669_0000044 | 3300046684 | Bacteria | 85633 |
| 146 | Ga0495669_0000152 | 3300046684 | Bacteria | 44284 |
| 147 | Ga0495669_0034351 | 3300046684 | Bacteria | 2235 |
| 148 | Ga0495613_0166705 | 3300046689 | Bacteria | 1565 |
| 149 | Ga0495581_0258577 | 3300047315 | Bacteria | 1018 |
| 150 | Ga0495672_0033782 | 3300047320 | Bacteria | 3167 |
| 151 | Ga0495672_0088708 | 3300047320 | Bacteria | 1704 |
| 152 | Ga0496112_0354080 | 3300048915 | Bacteria | 1410 |
| 153 | Ga0496115_0003595 | 3300048918 | Bacteria | 11143 |
| 154 | Ga0496125_0092567 | 3300048928 | Bacteria | 2260 |
| 155 | Ga0501034_0179913 | 3300049571 | Bacteria | 2080 |
| 156 | Ga0501043_0311737 | 3300049579 | Bacteria | 1201 |
| 157 | Ga0501047_0002252 | 3300049581 | Bacteria | 18471 |
| 158 | Ga0501047_0064566 | 3300049581 | Bacteria | 3531 |
| 159 | Ga0501070_0087542 | 3300049586 | Bacteria | 2578 |
| 160 | Ga0501257_002049 | 3300049686 | Bacteria | 4201 |
| 161 | Ga0501044_0495157 | 3300049823 | Bacteria | 1124 |
| 162 | nmdc:mga03683_87807_c1 | 3300050489 | Bacteria | 1352 |
| 163 | nmdc:mga0k408_49372_c1 | 3300050493 | Bacteria | 2435 |
| 164 | Ga0500643_003524 | 3300053087 | Bacteria | 7486 |
| 165 | Ga0500643_009000 | 3300053087 | Bacteria | 3858 |
| 166 | Ga0500641_0001984 | 3300053096 | Bacteria | 7260 |
| 167 | Ga0500641_0017002 | 3300053096 | Bacteria | 2713 |
| 168 | Ga0500555_006085 | 3300053103 | Bacteria | 3424 |
| 169 | Ga0500562_005118 | 3300053108 | Bacteria | 3295 |
| 170 | Ga0500562_006952 | 3300053108 | Bacteria | 2854 |
| 171 | Ga0500562_007905 | 3300053108 | Bacteria | 2686 |
| 172 | Ga0500595_003815 | 3300053119 | Bacteria | 6930 |
| 173 | Ga0500595_009368 | 3300053119 | Bacteria | 3954 |
| 174 | Ga0500622_0020686 | 3300053156 | Bacteria | 3495 |
| 175 | Ga0500645_003373 | 3300053730 | Bacteria | 6533 |
| 176 | Ga0500645_004150 | 3300053730 | Bacteria | 5640 |
| 177 | Ga0500645_015752 | 3300053730 | Bacteria | 2390 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049581 | Ga0501047_0002252 | Ga0501047_0002252_15825_16670 | 255 |
| 2 | 3300049686 | Ga0501257_002049 | Ga0501257_002049_1317_2156 | 257 |
| 3 | 3300053087 | Ga0500643_009000 | Ga0500643_009000_1502_2341 | 257 |
| 4 | 3300005331 | Ga0070670_100238037 | Ga0070670_1002380371 | 258 |
| 5 | 3300005347 | Ga0070668_100004828 | Ga0070668_10000482811 | 258 |
| 6 | 3300005353 | Ga0070669_100438500 | Ga0070669_1004385001 | 258 |
| 7 | 3300005617 | Ga0068859_100027008 | Ga0068859_1000270082 | 258 |
| 8 | 3300005618 | Ga0068864_100140006 | Ga0068864_1001400061 | 258 |
| 9 | 3300005719 | Ga0068861_100104121 | Ga0068861_1001041212 | 258 |
| 10 | 3300005843 | Ga0068860_100002644 | Ga0068860_10000264415 | 258 |
| 11 | 3300006931 | Ga0097620_100027009 | Ga0097620_1000270092 | 258 |
| 12 | 3300025923 | Ga0207681_10083067 | Ga0207681_100830672 | 258 |
| 13 | 3300025923 | Ga0207681_10231498 | Ga0207681_102314981 | 258 |
| 14 | 3300025925 | Ga0207650_10251657 | Ga0207650_102516572 | 258 |
| 15 | 3300025972 | Ga0207668_10003904 | Ga0207668_100039041 | 258 |
| 16 | 3300025972 | Ga0207668_10035390 | Ga0207668_100353901 | 258 |
| 17 | 3300025986 | Ga0207658_10076070 | Ga0207658_100760702 | 258 |
| 18 | 3300025986 | Ga0207658_10357513 | Ga0207658_103575131 | 258 |
| 19 | 3300026035 | Ga0207703_10103203 | Ga0207703_101032031 | 258 |
| 20 | 3300026095 | Ga0207676_10094866 | Ga0207676_100948661 | 258 |
| 21 | 3300026142 | Ga0207698_10323710 | Ga0207698_103237102 | 258 |
| 22 | 3300035695 | Ga0373927_0000472 | Ga0373927_0000472_12787_13632 | 258 |
| 23 | 3300037068 | Ga0373925_0000003 | Ga0373925_0000003_32211_33056 | 258 |
| 24 | 3300049581 | Ga0501047_0064566 | Ga0501047_0064566_1018_1857 | 258 |
| 25 | 3300053108 | Ga0500562_007905 | Ga0500562_007905_250_1092 | 258 |
| 26 | 3300005336 | Ga0070680_100003915 | Ga0070680_1000039157 | 259 |
| 27 | 3300005355 | Ga0070671_100004946 | Ga0070671_1000049469 | 259 |
| 28 | 3300005367 | Ga0070667_100010146 | Ga0070667_1000101463 | 259 |
| 29 | 3300005458 | Ga0070681_10122027 | Ga0070681_101220272 | 259 |
| 30 | 3300005563 | Ga0068855_100320811 | Ga0068855_1003208112 | 259 |
| 31 | 3300005617 | Ga0068859_100000930 | Ga0068859_10000093019 | 259 |
| 32 | 3300005719 | Ga0068861_100029832 | Ga0068861_1000298323 | 259 |
| 33 | 3300005841 | Ga0068863_100001315 | Ga0068863_10000131518 | 259 |
| 34 | 3300005842 | Ga0068858_100002906 | Ga0068858_1000029063 | 259 |
| 35 | 3300006931 | Ga0097620_100000930 | Ga0097620_10000093019 | 259 |
| 36 | 3300009093 | Ga0105240_10181822 | Ga0105240_101818222 | 259 |
| 37 | 3300009177 | Ga0105248_10003956 | Ga0105248_1000395610 | 259 |
| 38 | 3300009177 | Ga0105248_10004562 | Ga0105248_1000456212 | 259 |
| 39 | 3300014325 | Ga0163163_10002788 | Ga0163163_100027888 | 259 |
| 40 | 3300014968 | Ga0157379_10009103 | Ga0157379_100091039 | 259 |
| 41 | 3300025923 | Ga0207681_10003889 | Ga0207681_100038897 | 259 |
| 42 | 3300025931 | Ga0207644_10000907 | Ga0207644_1000090713 | 259 |
| 43 | 3300025941 | Ga0207711_10002809 | Ga0207711_100028096 | 259 |
| 44 | 3300025941 | Ga0207711_10043457 | Ga0207711_100434573 | 259 |
| 45 | 3300025986 | Ga0207658_10011078 | Ga0207658_100110786 | 259 |
| 46 | 3300026035 | Ga0207703_10005676 | Ga0207703_100056763 | 259 |
| 47 | 3300026088 | Ga0207641_10007794 | Ga0207641_100077947 | 259 |
| 48 | 3300026118 | Ga0207675_100076280 | Ga0207675_1000762802 | 259 |
| 49 | 3300026118 | Ga0207675_100360684 | Ga0207675_1003606842 | 259 |
| 50 | 3300028379 | Ga0268266_10169313 | Ga0268266_101693132 | 259 |
| 51 | 3300028381 | Ga0268264_10016726 | Ga0268264_100167265 | 259 |
| 52 | 3300035692 | Ga0373935_0078297 | Ga0373935_0078297_77_922 | 259 |
| 53 | 3300037418 | Ga0395900_0381901 | Ga0395900_0381901_434_1282 | 259 |
| 54 | 3300037466 | Ga0395898_0093522 | Ga0395898_0093522_1759_2607 | 259 |
| 55 | 3300037471 | Ga0395905_0015600 | Ga0395905_0015600_4875_5723 | 259 |
| 56 | 3300037471 | Ga0395905_0124369 | Ga0395905_0124369_365_1210 | 259 |
| 57 | 3300037471 | Ga0395905_0692009 | Ga0395905_0692009_49_894 | 259 |
| 58 | 3300044658 | Ga0466972_0065310 | Ga0466972_0065310_825_1670 | 259 |
| 59 | 3300044693 | Ga0466961_0320825 | Ga0466961_0320825_71_916 | 259 |
| 60 | 3300048928 | Ga0496125_0092567 | Ga0496125_0092567_48_896 | 259 |
| 61 | 3300048915 | Ga0496112_0354080 | Ga0496112_0354080_583_1368 | 260 |
| 62 | 3300032005 | Ga0307411_10055614 | Ga0307411_100556143 | 261 |
| 63 | 3300025254 | Ga0209148_1011804 | Ga0209148_10118042 | 263 |
| 64 | 3300049571 | Ga0501034_0179913 | Ga0501034_0179913_696_1544 | 268 |
| 65 | 3300049579 | Ga0501043_0311737 | Ga0501043_0311737_329_1177 | 268 |
| 66 | iso_pu_bacteria | 2643221598 | 2644001558 | 276 |
| 67 | iso_pu_bacteria | 2643221614 | 2644088031 | 276 |
| 68 | iso_pu_bacteria | 2643221661 | 2644344082 | 276 |
| 69 | iso_pu_bacteria | 2643221666 | 2644367388 | 276 |
| 70 | 3300053087 | Ga0500643_003524 | Ga0500643_003524_2527_3363 | 277 |
| 71 | 3300053096 | Ga0500641_0017002 | Ga0500641_0017002_1565_2401 | 277 |
| 72 | 3300053730 | Ga0500645_004150 | Ga0500645_004150_589_1425 | 277 |
| 73 | 3300005334 | Ga0068869_100238843 | Ga0068869_1002388432 | 279 |
| 74 | 3300025942 | Ga0207689_10235129 | Ga0207689_102351292 | 279 |
| 75 | 3300031251 | Ga0265327_10000130 | Ga0265327_1000013050 | 279 |
| 76 | 3300031251 | Ga0265327_10025444 | Ga0265327_100254444 | 279 |
| 77 | 3300050493 | nmdc:mga0k408_49372_c1 | nmdc:mga0k408_49372_c1_834_1673 | 279 |
| 78 | 3300053119 | Ga0500595_003815 | Ga0500595_003815_4590_5438 | 279 |
| 79 | 3300004625 | Ga0055543_1004910 | Ga0055543_10049104 | 280 |
| 80 | 3300005262 | Ga0065165_1001513 | Ga0065165_100151318 | 280 |
| 81 | 3300005336 | Ga0070680_100001145 | Ga0070680_1000011459 | 280 |
| 82 | 3300005341 | Ga0070691_10039731 | Ga0070691_100397312 | 280 |
| 83 | 3300005366 | Ga0070659_100000209 | Ga0070659_10000020912 | 280 |
| 84 | 3300005366 | Ga0070659_100010008 | Ga0070659_1000100086 | 280 |
| 85 | 3300005458 | Ga0070681_10006474 | Ga0070681_100064743 | 280 |
| 86 | 3300005530 | Ga0070679_100191262 | Ga0070679_1001912622 | 280 |
| 87 | 3300005539 | Ga0068853_100002965 | Ga0068853_1000029652 | 280 |
| 88 | 3300005539 | Ga0068853_100196290 | Ga0068853_1001962902 | 280 |
| 89 | 3300005539 | Ga0068853_100213815 | Ga0068853_1002138152 | 280 |
| 90 | 3300005548 | Ga0070665_100023633 | Ga0070665_1000236332 | 280 |
| 91 | 3300005563 | Ga0068855_100020586 | Ga0068855_1000205867 | 280 |
| 92 | 3300005563 | Ga0068855_100043218 | Ga0068855_1000432182 | 280 |
| 93 | 3300005563 | Ga0068855_100312950 | Ga0068855_1003129502 | 280 |
| 94 | 3300005616 | Ga0068852_100141879 | Ga0068852_1001418792 | 280 |
| 95 | 3300006881 | Ga0068865_100002232 | Ga0068865_1000022326 | 280 |
| 96 | 3300007265 | Ga0099794_10033413 | Ga0099794_100334132 | 280 |
| 97 | 3300007788 | Ga0099795_10061258 | Ga0099795_100612582 | 280 |
| 98 | 3300009093 | Ga0105240_10024293 | Ga0105240_100242935 | 280 |
| 99 | 3300009093 | Ga0105240_10025114 | Ga0105240_100251142 | 280 |
| 100 | 3300009551 | Ga0105238_10113831 | Ga0105238_101138313 | 280 |
| 101 | 3300010159 | Ga0099796_10029942 | Ga0099796_100299422 | 280 |
| 102 | 3300013104 | Ga0157370_10281165 | Ga0157370_102811652 | 280 |
| 103 | 3300013307 | Ga0157372_10114757 | Ga0157372_101147572 | 280 |
| 104 | 3300021361 | Ga0213872_10004940 | Ga0213872_100049403 | 280 |
| 105 | 3300025250 | Ga0209026_1010403 | Ga0209026_10104031 | 280 |
| 106 | 3300025250 | Ga0209026_1016023 | Ga0209026_10160232 | 280 |
| 107 | 3300025909 | Ga0207705_10000600 | Ga0207705_100006007 | 280 |
| 108 | 3300025912 | Ga0207707_10245854 | Ga0207707_102458542 | 280 |
| 109 | 3300025913 | Ga0207695_10002305 | Ga0207695_1000230531 | 280 |
| 110 | 3300025913 | Ga0207695_10007614 | Ga0207695_100076142 | 280 |
| 111 | 3300025913 | Ga0207695_10046702 | Ga0207695_100467022 | 280 |
| 112 | 3300025917 | Ga0207660_10004147 | Ga0207660_1000414710 | 280 |
| 113 | 3300025917 | Ga0207660_10007574 | Ga0207660_100075746 | 280 |
| 114 | 3300025917 | Ga0207660_10075571 | Ga0207660_100755712 | 280 |
| 115 | 3300025919 | Ga0207657_10000381 | Ga0207657_100003812 | 280 |
| 116 | 3300025919 | Ga0207657_10022673 | Ga0207657_100226732 | 280 |
| 117 | 3300025920 | Ga0207649_10280294 | Ga0207649_102802941 | 280 |
| 118 | 3300025921 | Ga0207652_10001952 | Ga0207652_1000195220 | 280 |
| 119 | 3300025932 | Ga0207690_10000116 | Ga0207690_1000011637 | 280 |
| 120 | 3300025934 | Ga0207686_10082393 | Ga0207686_100823932 | 280 |
| 121 | 3300025949 | Ga0207667_10010093 | Ga0207667_1001009311 | 280 |
| 122 | 3300025949 | Ga0207667_10125062 | Ga0207667_101250623 | 280 |
| 123 | 3300025949 | Ga0207667_10235441 | Ga0207667_102354412 | 280 |
| 124 | 3300026041 | Ga0207639_10020280 | Ga0207639_100202801 | 280 |
| 125 | 3300026142 | Ga0207698_10021618 | Ga0207698_100216183 | 280 |
| 126 | 3300027111 | Ga0209281_1012733 | Ga0209281_10127332 | 280 |
| 127 | 3300027378 | Ga0209981_1000672 | Ga0209981_10006722 | 280 |
| 128 | 3300027512 | Ga0209179_1033739 | Ga0209179_10337391 | 280 |
| 129 | 3300027543 | Ga0209999_1023613 | Ga0209999_10236132 | 280 |
| 130 | 3300027665 | Ga0209983_1000897 | Ga0209983_10008978 | 280 |
| 131 | 3300027671 | Ga0209588_1008735 | Ga0209588_10087355 | 280 |
| 132 | 3300028379 | Ga0268266_10000003 | Ga0268266_10000003885 | 280 |
| 133 | 3300028786 | Ga0307517_10035278 | Ga0307517_100352781 | 280 |
| 134 | 3300028800 | Ga0265338_10021562 | Ga0265338_100215623 | 280 |
| 135 | 3300030521 | Ga0307511_10062646 | Ga0307511_100626462 | 280 |
| 136 | 3300031456 | Ga0307513_10000077 | Ga0307513_1000007738 | 280 |
| 137 | 3300031456 | Ga0307513_10062963 | Ga0307513_100629634 | 280 |
| 138 | 3300031711 | Ga0265314_10074169 | Ga0265314_100741692 | 280 |
| 139 | 3300033180 | Ga0307510_10059914 | Ga0307510_100599144 | 280 |
| 140 | 3300035113 | Ga0373936_0002003 | Ga0373936_0002003_2841_3686 | 280 |
| 141 | 3300037312 | Ga0395899_0000498 | Ga0395899_0000498_12006_12851 | 280 |
| 142 | 3300037418 | Ga0395900_0000008 | Ga0395900_0000008_63621_64466 | 280 |
| 143 | 3300037471 | Ga0395905_0001355 | Ga0395905_0001355_20722_21567 | 280 |
| 144 | 3300038443 | Ga0395901_0000008 | Ga0395901_0000008_416000_416845 | 280 |
| 145 | 3300039437 | Ga0436365_0187494 | Ga0436365_0187494_66686_67537 | 280 |
| 146 | 3300039438 | Ga0436360_0181248 | Ga0436360_0181248_846_1697 | 280 |
| 147 | 3300039447 | Ga0436361_0314376 | Ga0436361_0314376_2119_2970 | 280 |
| 148 | 3300041997 | Ga0439431_0020501 | Ga0439431_0020501_395_1237 | 280 |
| 149 | 3300044684 | Ga0466966_0292237 | Ga0466966_0292237_35_880 | 280 |
| 150 | 3300044842 | Ga0466957_0235516 | Ga0466957_0235516_328_1173 | 280 |
| 151 | 3300046499 | Ga0495594_0064410 | Ga0495594_0064410_62_907 | 280 |
| 152 | 3300046543 | Ga0495645_0107509 | Ga0495645_0107509_748_1593 | 280 |
| 153 | 3300046616 | Ga0495668_0012730 | Ga0495668_0012730_1071_1925 | 280 |
| 154 | 3300046684 | Ga0495669_0000044 | Ga0495669_0000044_22737_23582 | 280 |
| 155 | 3300046684 | Ga0495669_0000152 | Ga0495669_0000152_13628_14473 | 280 |
| 156 | 3300046684 | Ga0495669_0034351 | Ga0495669_0034351_412_1257 | 280 |
| 157 | 3300046689 | Ga0495613_0166705 | Ga0495613_0166705_344_1189 | 280 |
| 158 | 3300047315 | Ga0495581_0258577 | Ga0495581_0258577_15_860 | 280 |
| 159 | 3300047320 | Ga0495672_0033782 | Ga0495672_0033782_563_1408 | 280 |
| 160 | 3300048918 | Ga0496115_0003595 | Ga0496115_0003595_559_1419 | 280 |
| 161 | 3300049586 | Ga0501070_0087542 | Ga0501070_0087542_1336_2178 | 280 |
| 162 | 3300049823 | Ga0501044_0495157 | Ga0501044_0495157_176_1021 | 280 |
| 163 | 3300053096 | Ga0500641_0001984 | Ga0500641_0001984_5036_5881 | 280 |
| 164 | 3300053103 | Ga0500555_006085 | Ga0500555_006085_55_900 | 280 |
| 165 | 3300053108 | Ga0500562_005118 | Ga0500562_005118_1410_2255 | 280 |
| 166 | 3300053108 | Ga0500562_006952 | Ga0500562_006952_937_1782 | 280 |
| 167 | 3300053119 | Ga0500595_009368 | Ga0500595_009368_1205_2059 | 280 |
| 168 | 3300053156 | Ga0500622_0020686 | Ga0500622_0020686_1695_2540 | 280 |
| 169 | 3300053730 | Ga0500645_003373 | Ga0500645_003373_4825_5667 | 280 |
| 170 | 3300053730 | Ga0500645_015752 | Ga0500645_015752_1346_2191 | 280 |
| 171 | 3300026078 | Ga0207702_10618015 | Ga0207702_106180152 | 281 |
| 172 | 3300033180 | Ga0307510_10016479 | Ga0307510_100164792 | 281 |
| 173 | 3300047320 | Ga0495672_0088708 | Ga0495672_0088708_620_1468 | 281 |
| 174 | 3300025304 | Ga0209257_1002949 | Ga0209257_100294913 | 283 |
| 175 | 3300003791 | Ga0055530_10004402 | Ga0055530_100044024 | 284 |
| 176 | 3300003794 | Ga0055531_10003745 | Ga0055531_100037452 | 284 |
| 177 | 3300025297 | Ga0209758_1000894 | Ga0209758_100089430 | 284 |
| 178 | 3300025298 | Ga0209050_1000173 | Ga0209050_100017348 | 284 |
| 179 | 3300025304 | Ga0209257_1000196 | Ga0209257_100019648 | 284 |
| 180 | 3300046471 | Ga0495650_0023117 | Ga0495650_0023117_486_1340 | 284 |
| 181 | 3300050489 | nmdc:mga03683_87807_c1 | nmdc:mga03683_87807_c1_163_1017 | 284 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6vh5-assembly1.cif.gz_C | crystal structure of prephenate dehydratase from brucella melitensis biovar abortus 2308 in complex with phenylalanine | 0.9574 | 9 | 282 |
| 7am0-assembly2.cif.gz_C | gqqa- a novel type of quorum quenching acylases | 0.9484 | 10 | 282 |
| 7am0-assembly1.cif.gz_A | gqqa- a novel type of quorum quenching acylases | 0.945 | 10 | 284 |
| 6vh5-assembly1.cif.gz_C | crystal structure of prephenate dehydratase from brucella melitensis biovar abortus 2308 in complex with phenylalanine | 0.9374 | 9 | 282 |
| 7am0-assembly2.cif.gz_C | gqqa- a novel type of quorum quenching acylases | 0.935 | 10 | 282 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D6ELY8_206_287_3.40.190.10 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.9756 | 94 | 172 | 3.40.190.10 |
| 2qmxB02 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.9506 | 90 | 173 | 3.40.190.10 |
| af_A0A1D6ICV1_89_167_3.40.190.10 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.9473 | 94 | 165 | 3.40.190.10 |
| 3luyA02 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.9351 | 91 | 166 | 3.40.190.10 |
| af_A0A1D6ELY8_206_287_3.40.190.10 | Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II | 0.9295 | 94 | 172 | 3.40.190.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7W6RAF7-F1-model_v4 | prephenate dehydratase (EC 4.2.1.51) | 0.9755 | 9 | 283 |
GO:0004106
GO:0004664 GO:0005737 GO:0009094 |
| AF-A0A6G7YNK8-F1-model_v4 | prephenate dehydratase (EC 4.2.1.51) | 0.9754 | 9 | 183 |
GO:0004664
GO:0005737 GO:0009094 |
| AF-A0A7X2FUW0-F1-model_v4 | prephenate dehydratase (EC 4.2.1.51) | 0.9735 | 8 | 283 |
GO:0003677
GO:0004664 GO:0005737 GO:0009094 |
| AF-A0A3T0Q066-F1-model_v4 | deleted | 0.9721 | 9 | 283 |
|
| AF-A0A5R2N093-F1-model_v4 | prephenate dehydratase (EC 4.2.1.51) | 0.9688 | 92 | 189 |
GO:0004664
GO:0005737 GO:0009094 |
Predicted Structure (AlphaFold2)
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