F276791

General Info

Members Datasets Scaffolds Average Seq Length
181 84 179 293

Family's Representative Sequence

Representative Sequence 3300005337|Ga0070682_100293601|Ga0070682_1002936011
Length 286
Sequence MRIVEKLGGSSPAISFEFFPPKDQEGVDRLFATVADLAPFAPAYVSVTYGAGGSTRQLTVDLVGRIQQEVGIEAMAHLTCVGATQAELGGVLDQLQQKGVQNIIALRGDPPKGSSTFVTHEGGFSNASQLVAFAKQHGKFCIAGACYPEKHPEAASLDVDLQMLKRKVDAGAEFLITQLFFDNADYFAFVEKARALGITVPIIAGIMPVTNVSQIKRFTALCGAGMPDALMQKLEPVAADAEAVGEIGVQHAVEQCRELLAKGAPGVHFYTLNRSKATVEILRRLR

Samples

Sample ID Description Type Environment
1 2684623219 Planctomyces sp. SH-PL14 Isolate Unclassified
2 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
16 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
17 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
18 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
20 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
21 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
22 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
30 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
31 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
32 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
33 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
34 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
35 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
36 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
37 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
38 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
39 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
40 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
41 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
42 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
43 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
44 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
45 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
46 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
49 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
50 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
53 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
54 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
55 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
56 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
57 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
58 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
59 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
60 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
65 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
76 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
77 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
78 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
79 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
82 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
83 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
84 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.9
Metatranscriptomes 0
Isolates 1.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.66
Nodule 0
Rhizoplane 0.55
Rhizosphere 93.92
Stem 0
Stem Tuber 0
Unclassified 3.87

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10006043 3300003320 Bacteria 14431
2 rootH2_10008699 3300003320 Bacteria 11627
3 rootL2_10037397 3300003322 Bacteria 13451
4 Ga0070683_100002305 3300005329 Bacteria 15135
5 Ga0068869_100000041 3300005334 Bacteria 52640
6 Ga0070682_100293601 3300005337 Unclassified 1190
7 Ga0068868_100225591 3300005338 Bacteria 1570
8 Ga0068867_100017102 3300005459 Bacteria 5151
9 Ga0068855_100000161 3300005563 Bacteria 85785
10 Ga0068857_100042755 3300005577 Bacteria 4020
11 Ga0068859_100269731 3300005617 Bacteria 1794
12 Ga0068864_100076678 3300005618 Bacteria 2922
13 Ga0068863_100565643 3300005841 Bacteria 1123
14 Ga0070717_10011314 3300006028 Bacteria 6772
15 Ga0097621_100260473 3300006237 Bacteria 1521
16 Ga0068871_100110191 3300006358 Bacteria 2315
17 Ga0097620_100269746 3300006931 Bacteria 1794
18 Ga0105238_10244345 3300009551 Bacteria 1773
19 Ga0157379_10180171 3300014968 Unclassified 1909
20 Ga0157376_10084058 3300014969 Bacteria 2739
21 Ga0207704_10023428 3300025938 Bacteria 3327
22 Ga0207689_10000510 3300025942 Bacteria 36782
23 Ga0207667_10000706 3300025949 Bacteria 43372
24 Ga0207702_10004704 3300026078 Bacteria 12065
25 Ga0207702_10333623 3300026078 Bacteria 1447
26 Ga0207641_10538135 3300026088 Bacteria 1138
27 Ga0207648_10001280 3300026089 Bacteria 28091
28 Ga0207674_10036351 3300026116 Bacteria 5134
29 Ga0265337_1006011 3300028556 Bacteria 4737
30 Ga0265337_1040619 3300028556 Bacteria 1341
31 Ga0265326_10028622 3300028558 Bacteria 1587
32 Ga0265319_1000236 3300028563 Bacteria 41417
33 Ga0265319_1001875 3300028563 Bacteria 11958
34 Ga0265319_1005513 3300028563 Bacteria 6051
35 Ga0265319_1007978 3300028563 Bacteria 4692
36 Ga0265319_1015044 3300028563 Bacteria 3014
37 Ga0265319_1018555 3300028563 Bacteria 2617
38 Ga0265319_1051472 3300028563 Bacteria 1358
39 Ga0265334_10002144 3300028573 Bacteria 9295
40 Ga0265334_10009375 3300028573 Bacteria 4141
41 Ga0265334_10053632 3300028573 Unclassified 1539
42 Ga0265318_10000002 3300028577 Bacteria 428208
43 Ga0265318_10000726 3300028577 Bacteria 22092
44 Ga0265318_10001124 3300028577 Bacteria 16714
45 Ga0265318_10003053 3300028577 Bacteria 8612
46 Ga0265318_10012453 3300028577 Bacteria 3622
47 Ga0265318_10030946 3300028577 Bacteria 2079
48 Ga0265323_10000087 3300028653 Bacteria 53098
49 Ga0265323_10001373 3300028653 Bacteria 12052
50 Ga0265323_10008457 3300028653 Bacteria 4243
51 Ga0265323_10009789 3300028653 Bacteria 3901
52 Ga0265323_10013083 3300028653 Bacteria 3317
53 Ga0265323_10065052 3300028653 Bacteria 1258
54 Ga0265323_10069547 3300028653 Bacteria 1206
55 Ga0265322_10001836 3300028654 Bacteria 6732
56 Ga0265336_10004720 3300028666 Bacteria 5109
57 Ga0265338_10001787 3300028800 Bacteria 33884
58 Ga0265338_10008407 3300028800 Bacteria 12537
59 Ga0265338_10097158 3300028800 Bacteria 2414
60 Ga0265324_10003135 3300029957 Bacteria 8026
61 Ga0265324_10005224 3300029957 Bacteria 5651
62 Ga0265330_10008731 3300031235 Bacteria 4858
63 Ga0265330_10036841 3300031235 Bacteria 2179
64 Ga0265330_10037926 3300031235 Bacteria 2143
65 Ga0265330_10048207 3300031235 Bacteria 1873
66 Ga0265330_10054645 3300031235 Bacteria 1745
67 Ga0265332_10050315 3300031238 Bacteria 1791
68 Ga0265332_10059650 3300031238 Bacteria 1633
69 Ga0265328_10026638 3300031239 Bacteria 2172
70 Ga0265320_10000204 3300031240 Bacteria 48100
71 Ga0265320_10000375 3300031240 Bacteria 36376
72 Ga0265320_10000715 3300031240 Bacteria 25414
73 Ga0265320_10000733 3300031240 Bacteria 25084
74 Ga0265320_10001638 3300031240 Bacteria 15993
75 Ga0265320_10014456 3300031240 Bacteria 4492
76 Ga0265320_10021283 3300031240 Bacteria 3493
77 Ga0265320_10022664 3300031240 Bacteria 3355
78 Ga0265320_10073884 3300031240 Bacteria 1601
79 Ga0265320_10086057 3300031240 Bacteria 1462
80 Ga0265320_10165265 3300031240 Bacteria 995
81 Ga0265325_10009510 3300031241 Bacteria 5671
82 Ga0265339_10115742 3300031249 Bacteria 1383
83 Ga0265331_10034776 3300031250 Bacteria 2483
84 Ga0265331_10088197 3300031250 Bacteria 1436
85 Ga0265327_10001282 3300031251 Bacteria 33063
86 Ga0265327_10001774 3300031251 Bacteria 25451
87 Ga0265327_10005327 3300031251 Bacteria 10775
88 Ga0265316_10002150 3300031344 Bacteria 20715
89 Ga0265316_10015436 3300031344 Bacteria 6679
90 Ga0265316_10047941 3300031344 Bacteria 3377
91 Ga0265316_10050697 3300031344 Bacteria 3263
92 Ga0265316_10121834 3300031344 Bacteria 1969
93 Ga0265316_10142989 3300031344 Bacteria 1796
94 Ga0265316_10163584 3300031344 Bacteria 1663
95 Ga0307408_100000062 3300031548 Bacteria 127855
96 Ga0265313_10000197 3300031595 Bacteria 64794
97 Ga0265313_10000531 3300031595 Bacteria 39887
98 Ga0265313_10011047 3300031595 Bacteria 5636
99 Ga0265313_10015258 3300031595 Bacteria 4487
100 Ga0265313_10037269 3300031595 Bacteria 2433
101 Ga0307508_10000024 3300031616 Bacteria 176806
102 Ga0307508_10000904 3300031616 Bacteria 34589
103 Ga0265314_10000347 3300031711 Bacteria 64333
104 Ga0265314_10001196 3300031711 Bacteria 29804
105 Ga0265314_10009198 3300031711 Bacteria 8371
106 Ga0265314_10061157 3300031711 Bacteria 2566
107 Ga0265314_10175225 3300031711 Bacteria 1291
108 Ga0265314_10204183 3300031711 Bacteria 1166
109 Ga0265342_10006321 3300031712 Bacteria 8834
110 Ga0265342_10012884 3300031712 Bacteria 5642
111 Ga0265342_10033537 3300031712 Bacteria 3156
112 Ga0265342_10035198 3300031712 Bacteria 3067
113 Ga0265342_10035511 3300031712 Bacteria 3051
114 Ga0265342_10039486 3300031712 Bacteria 2868
115 Ga0265342_10046777 3300031712 Bacteria 2599
116 Ga0265342_10056230 3300031712 Bacteria 2333
117 Ga0265342_10060070 3300031712 Bacteria 2243
118 Ga0265342_10067067 3300031712 Bacteria 2101
119 Ga0307410_10000016 3300031852 Bacteria 72757
120 Ga0307407_10003156 3300031903 Bacteria 6674
121 Ga0307409_100000034 3300031995 Bacteria 48281
122 Ga0307416_100000012 3300032002 Bacteria 296814
123 Ga0395905_0000250 3300037471 Bacteria 80488
124 Ga0395905_0481320 3300037471 Bacteria 1141
125 Ga0451798_0158125 3300041458 Bacteria 1211
126 Ga0451577_0002685 3300042876 Bacteria 20750
127 Ga0451577_0022201 3300042876 Bacteria 5796
128 Ga0451577_0180543 3300042876 Bacteria 1903
129 Ga0451577_0358330 3300042876 Bacteria 1323
130 Ga0453683_0001563 3300044673 Bacteria 19415
131 Ga0453683_0249653 3300044673 Bacteria 1131
132 Ga0453684_0000045 3300044712 Bacteria 582917
133 Ga0453684_0003627 3300044712 Bacteria 34381
134 Ga0453684_0035571 3300044712 Bacteria 6880
135 Ga0453684_0081783 3300044712 Bacteria 4027
136 Ga0453684_0097768 3300044712 Bacteria 3602
137 Ga0453684_0142414 3300044712 Bacteria 2861
138 Ga0451576_0000214 3300045051 Bacteria 144183
139 Ga0451576_0001245 3300045051 Bacteria 44748
140 Ga0451576_0012505 3300045051 Bacteria 9532
141 Ga0451576_0020245 3300045051 Bacteria 7247
142 Ga0451576_0048989 3300045051 Bacteria 4434
143 Ga0451576_0189411 3300045051 Unclassified 2148
144 Ga0451576_0842596 3300045051 Bacteria 962
145 Ga0466967_0036371 3300045976 Bacteria 4203
146 Ga0495611_0196176 3300046648 Bacteria 942
147 Ga0501032_0000514 3300049569 Bacteria 31415
148 Ga0501032_0000818 3300049569 Bacteria 25273
149 Ga0501033_0000564 3300049570 Bacteria 34479
150 Ga0501034_0218653 3300049571 Bacteria 1858
151 Ga0501037_0007944 3300049573 Bacteria 7773
152 Ga0501038_0000432 3300049574 Bacteria 36507
153 Ga0501039_0015104 3300049575 Bacteria 5908
154 Ga0501039_0485052 3300049575 Bacteria 971
155 Ga0501042_0011675 3300049578 Bacteria 5934
156 Ga0501046_0001353 3300049580 Bacteria 23723
157 Ga0501046_0016213 3300049580 Bacteria 6246
158 Ga0501046_0016609 3300049580 Bacteria 6160
159 Ga0501046_0067738 3300049580 Bacteria 2779
160 Ga0501047_0001919 3300049581 Bacteria 19982
161 Ga0501047_0025378 3300049581 Bacteria 5696
162 Ga0501047_0054309 3300049581 Bacteria 3874
163 Ga0501047_0066252 3300049581 Bacteria 3481
164 Ga0501047_0123722 3300049581 Unclassified 2467
165 Ga0501048_0122298 3300049582 Bacteria 1839
166 Ga0501070_0194119 3300049586 Bacteria 1668
167 Ga0501243_000383 3300049675 Bacteria 5822
168 Ga0501080_0327047 3300049742 Bacteria 1387
169 Ga0501083_0000930 3300049744 Bacteria 19425
170 Ga0501083_0021800 3300049744 Bacteria 4450
171 Ga0501083_0034316 3300049744 Bacteria 3470
172 Ga0501035_0000168 3300049822 Bacteria 80065
173 Ga0501044_0000025 3300049823 Bacteria 187867
174 Ga0501044_0000744 3300049823 Bacteria 39316
175 Ga0501044_0284214 3300049823 Bacteria 1587
176 Ga0501045_0053511 3300049824 Bacteria 2950
177 Ga0500568_0001546 3300053139 Bacteria 14621
178 Ga0500588_0014082 3300053146 Bacteria 2019
179 Ga0500622_0004209 3300053156 Bacteria 9170

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049823 Ga0501044_0284214 Ga0501044_0284214_18_839 273
2 iso_pu_bacteria 2684623219 2687235877 284
3 3300005337 Ga0070682_100293601 Ga0070682_1002936011 286
4 3300005563 Ga0068855_100000161 Ga0068855_10000016118 286
5 3300005617 Ga0068859_100269731 Ga0068859_1002697312 286
6 3300005618 Ga0068864_100076678 Ga0068864_1000766782 286
7 3300006931 Ga0097620_100269746 Ga0097620_1002697462 286
8 3300025949 Ga0207667_10000706 Ga0207667_1000070625 286
9 3300031616 Ga0307508_10000904 Ga0307508_1000090413 286
10 3300041458 Ga0451798_0158125 Ga0451798_0158125_202_1062 286
11 3300049581 Ga0501047_0123722 Ga0501047_0123722_1272_2132 286
12 iso_pu_bacteria 2786546940 2788437668 288
13 3300003322 rootL2_10037397 rootL2_100373976 291
14 3300003320 rootH2_10008699 rootH2_100086997 292
15 3300005329 Ga0070683_100002305 Ga0070683_1000023056 292
16 3300005334 Ga0068869_100000041 Ga0068869_10000004153 292
17 3300005338 Ga0068868_100225591 Ga0068868_1002255911 292
18 3300005459 Ga0068867_100017102 Ga0068867_1000171024 292
19 3300005577 Ga0068857_100042755 Ga0068857_1000427554 292
20 3300005841 Ga0068863_100565643 Ga0068863_1005656432 292
21 3300006028 Ga0070717_10011314 Ga0070717_100113143 292
22 3300006237 Ga0097621_100260473 Ga0097621_1002604732 292
23 3300006358 Ga0068871_100110191 Ga0068871_1001101912 292
24 3300009551 Ga0105238_10244345 Ga0105238_102443452 292
25 3300014969 Ga0157376_10084058 Ga0157376_100840582 292
26 3300025938 Ga0207704_10023428 Ga0207704_100234284 292
27 3300025942 Ga0207689_10000510 Ga0207689_100005109 292
28 3300026078 Ga0207702_10004704 Ga0207702_100047047 292
29 3300026078 Ga0207702_10333623 Ga0207702_103336232 292
30 3300026088 Ga0207641_10538135 Ga0207641_105381352 292
31 3300026089 Ga0207648_10001280 Ga0207648_100012806 292
32 3300026116 Ga0207674_10036351 Ga0207674_100363516 292
33 3300028556 Ga0265337_1040619 Ga0265337_10406192 292
34 3300028563 Ga0265319_1000236 Ga0265319_100023627 292
35 3300028563 Ga0265319_1001875 Ga0265319_10018758 292
36 3300028563 Ga0265319_1005513 Ga0265319_10055135 292
37 3300028563 Ga0265319_1015044 Ga0265319_10150443 292
38 3300028563 Ga0265319_1018555 Ga0265319_10185554 292
39 3300028563 Ga0265319_1051472 Ga0265319_10514722 292
40 3300028573 Ga0265334_10002144 Ga0265334_100021445 292
41 3300028573 Ga0265334_10009375 Ga0265334_100093753 292
42 3300028577 Ga0265318_10000002 Ga0265318_10000002163 292
43 3300028577 Ga0265318_10000726 Ga0265318_1000072617 292
44 3300028577 Ga0265318_10012453 Ga0265318_100124531 292
45 3300028577 Ga0265318_10030946 Ga0265318_100309462 292
46 3300028653 Ga0265323_10000087 Ga0265323_1000008728 292
47 3300028653 Ga0265323_10001373 Ga0265323_100013739 292
48 3300028653 Ga0265323_10008457 Ga0265323_100084574 292
49 3300028653 Ga0265323_10009789 Ga0265323_100097893 292
50 3300028653 Ga0265323_10013083 Ga0265323_100130832 292
51 3300028653 Ga0265323_10069547 Ga0265323_100695472 292
52 3300028654 Ga0265322_10001836 Ga0265322_100018362 292
53 3300028800 Ga0265338_10097158 Ga0265338_100971583 292
54 3300031235 Ga0265330_10008731 Ga0265330_100087312 292
55 3300031235 Ga0265330_10036841 Ga0265330_100368411 292
56 3300031235 Ga0265330_10048207 Ga0265330_100482072 292
57 3300031235 Ga0265330_10054645 Ga0265330_100546451 292
58 3300031240 Ga0265320_10000204 Ga0265320_1000020433 292
59 3300031240 Ga0265320_10000733 Ga0265320_1000073318 292
60 3300031240 Ga0265320_10001638 Ga0265320_100016382 292
61 3300031240 Ga0265320_10014456 Ga0265320_100144563 292
62 3300031240 Ga0265320_10021283 Ga0265320_100212832 292
63 3300031240 Ga0265320_10073884 Ga0265320_100738841 292
64 3300031250 Ga0265331_10034776 Ga0265331_100347763 292
65 3300031250 Ga0265331_10088197 Ga0265331_100881972 292
66 3300031251 Ga0265327_10001282 Ga0265327_1000128220 292
67 3300031251 Ga0265327_10001774 Ga0265327_1000177411 292
68 3300031344 Ga0265316_10015436 Ga0265316_100154363 292
69 3300031344 Ga0265316_10050697 Ga0265316_100506972 292
70 3300031344 Ga0265316_10121834 Ga0265316_101218342 292
71 3300031344 Ga0265316_10142989 Ga0265316_101429892 292
72 3300031548 Ga0307408_100000062 Ga0307408_10000006292 292
73 3300031595 Ga0265313_10000197 Ga0265313_1000019721 292
74 3300031595 Ga0265313_10011047 Ga0265313_100110473 292
75 3300031595 Ga0265313_10015258 Ga0265313_100152581 292
76 3300031595 Ga0265313_10037269 Ga0265313_100372691 292
77 3300031616 Ga0307508_10000024 Ga0307508_10000024122 292
78 3300031711 Ga0265314_10000347 Ga0265314_1000034740 292
79 3300031711 Ga0265314_10001196 Ga0265314_1000119625 292
80 3300031711 Ga0265314_10061157 Ga0265314_100611572 292
81 3300031711 Ga0265314_10175225 Ga0265314_101752251 292
82 3300031711 Ga0265314_10204183 Ga0265314_102041831 292
83 3300031712 Ga0265342_10006321 Ga0265342_100063212 292
84 3300031712 Ga0265342_10033537 Ga0265342_100335372 292
85 3300031712 Ga0265342_10035198 Ga0265342_100351982 292
86 3300031712 Ga0265342_10035511 Ga0265342_100355111 292
87 3300031712 Ga0265342_10046777 Ga0265342_100467772 292
88 3300031712 Ga0265342_10060070 Ga0265342_100600702 292
89 3300031712 Ga0265342_10067067 Ga0265342_100670671 292
90 3300031852 Ga0307410_10000016 Ga0307410_1000001646 292
91 3300031903 Ga0307407_10003156 Ga0307407_100031565 292
92 3300031995 Ga0307409_100000034 Ga0307409_10000003426 292
93 3300032002 Ga0307416_100000012 Ga0307416_100000012247 292
94 3300037471 Ga0395905_0000250 Ga0395905_0000250_18193_19071 292
95 3300037471 Ga0395905_0481320 Ga0395905_0481320_183_1061 292
96 3300042876 Ga0451577_0002685 Ga0451577_0002685_2877_3755 292
97 3300042876 Ga0451577_0022201 Ga0451577_0022201_1079_1957 292
98 3300042876 Ga0451577_0180543 Ga0451577_0180543_176_1054 292
99 3300042876 Ga0451577_0358330 Ga0451577_0358330_396_1274 292
100 3300044673 Ga0453683_0001563 Ga0453683_0001563_18442_19320 292
101 3300044673 Ga0453683_0249653 Ga0453683_0249653_191_1069 292
102 3300044712 Ga0453684_0000045 Ga0453684_0000045_565695_566573 292
103 3300044712 Ga0453684_0003627 Ga0453684_0003627_19300_20178 292
104 3300044712 Ga0453684_0035571 Ga0453684_0035571_1339_2217 292
105 3300044712 Ga0453684_0081783 Ga0453684_0081783_2757_3635 292
106 3300044712 Ga0453684_0097768 Ga0453684_0097768_1110_1988 292
107 3300044712 Ga0453684_0142414 Ga0453684_0142414_1747_2625 292
108 3300045051 Ga0451576_0000214 Ga0451576_0000214_134814_135692 292
109 3300045051 Ga0451576_0001245 Ga0451576_0001245_28800_29678 292
110 3300045051 Ga0451576_0012505 Ga0451576_0012505_476_1354 292
111 3300045051 Ga0451576_0020245 Ga0451576_0020245_4960_5838 292
112 3300045051 Ga0451576_0048989 Ga0451576_0048989_1062_1940 292
113 3300045051 Ga0451576_0189411 Ga0451576_0189411_79_957 292
114 3300045051 Ga0451576_0842596 Ga0451576_0842596_26_904 292
115 3300049569 Ga0501032_0000514 Ga0501032_0000514_28916_29794 292
116 3300049569 Ga0501032_0000818 Ga0501032_0000818_14156_15034 292
117 3300049570 Ga0501033_0000564 Ga0501033_0000564_33522_34400 292
118 3300049571 Ga0501034_0218653 Ga0501034_0218653_729_1607 292
119 3300049573 Ga0501037_0007944 Ga0501037_0007944_976_1854 292
120 3300049574 Ga0501038_0000432 Ga0501038_0000432_8031_8909 292
121 3300049575 Ga0501039_0015104 Ga0501039_0015104_2429_3307 292
122 3300049575 Ga0501039_0485052 Ga0501039_0485052_60_938 292
123 3300049578 Ga0501042_0011675 Ga0501042_0011675_854_1732 292
124 3300049580 Ga0501046_0001353 Ga0501046_0001353_7945_8823 292
125 3300049580 Ga0501046_0016213 Ga0501046_0016213_3880_4758 292
126 3300049580 Ga0501046_0016609 Ga0501046_0016609_3956_4834 292
127 3300049581 Ga0501047_0025378 Ga0501047_0025378_4431_5309 292
128 3300049581 Ga0501047_0054309 Ga0501047_0054309_572_1450 292
129 3300049581 Ga0501047_0066252 Ga0501047_0066252_355_1233 292
130 3300049582 Ga0501048_0122298 Ga0501048_0122298_67_945 292
131 3300049586 Ga0501070_0194119 Ga0501070_0194119_544_1422 292
132 3300049675 Ga0501243_000383 Ga0501243_000383_1972_2850 292
133 3300049742 Ga0501080_0327047 Ga0501080_0327047_411_1289 292
134 3300049744 Ga0501083_0000930 Ga0501083_0000930_15249_16127 292
135 3300049744 Ga0501083_0021800 Ga0501083_0021800_576_1454 292
136 3300049744 Ga0501083_0034316 Ga0501083_0034316_1112_1990 292
137 3300049822 Ga0501035_0000168 Ga0501035_0000168_2332_3210 292
138 3300049823 Ga0501044_0000025 Ga0501044_0000025_104710_105588 292
139 3300049824 Ga0501045_0053511 Ga0501045_0053511_1859_2737 292
140 3300053139 Ga0500568_0001546 Ga0500568_0001546_11338_12216 292
141 3300053146 Ga0500588_0014082 Ga0500588_0014082_973_1851 292
142 3300053156 Ga0500622_0004209 Ga0500622_0004209_792_1670 292
143 3300028556 Ga0265337_1006011 Ga0265337_10060113 293
144 3300028558 Ga0265326_10028622 Ga0265326_100286222 293
145 3300028563 Ga0265319_1007978 Ga0265319_10079785 293
146 3300028573 Ga0265334_10053632 Ga0265334_100536322 293
147 3300028577 Ga0265318_10001124 Ga0265318_100011244 293
148 3300028577 Ga0265318_10003053 Ga0265318_100030537 293
149 3300028666 Ga0265336_10004720 Ga0265336_100047203 293
150 3300028800 Ga0265338_10001787 Ga0265338_1000178720 293
151 3300028800 Ga0265338_10008407 Ga0265338_100084073 293
152 3300029957 Ga0265324_10003135 Ga0265324_100031357 293
153 3300029957 Ga0265324_10005224 Ga0265324_100052244 293
154 3300031238 Ga0265332_10050315 Ga0265332_100503152 293
155 3300031238 Ga0265332_10059650 Ga0265332_100596501 293
156 3300031239 Ga0265328_10026638 Ga0265328_100266383 293
157 3300031240 Ga0265320_10000715 Ga0265320_1000071515 293
158 3300031240 Ga0265320_10022664 Ga0265320_100226644 293
159 3300031240 Ga0265320_10165265 Ga0265320_101652651 293
160 3300031241 Ga0265325_10009510 Ga0265325_100095104 293
161 3300031249 Ga0265339_10115742 Ga0265339_101157421 293
162 3300031251 Ga0265327_10005327 Ga0265327_100053278 293
163 3300031344 Ga0265316_10002150 Ga0265316_1000215013 293
164 3300031595 Ga0265313_10000531 Ga0265313_1000053110 293
165 3300031711 Ga0265314_10009198 Ga0265314_100091984 293
166 3300031712 Ga0265342_10012884 Ga0265342_100128844 293
167 3300031712 Ga0265342_10039486 Ga0265342_100394863 293
168 3300031712 Ga0265342_10056230 Ga0265342_100562302 293
169 3300046648 Ga0495611_0196176 Ga0495611_0196176_49_930 293
170 3300003320 rootH2_10006043 rootH2_100060437 294
171 3300014968 Ga0157379_10180171 Ga0157379_101801712 294
172 3300028653 Ga0265323_10065052 Ga0265323_100650522 294
173 3300031235 Ga0265330_10037926 Ga0265330_100379262 294
174 3300031240 Ga0265320_10000375 Ga0265320_1000037532 294
175 3300031240 Ga0265320_10086057 Ga0265320_100860571 294
176 3300031344 Ga0265316_10047941 Ga0265316_100479411 294
177 3300031344 Ga0265316_10163584 Ga0265316_101635842 294
178 3300045976 Ga0466967_0036371 Ga0466967_0036371_1603_2487 294
179 3300049580 Ga0501046_0067738 Ga0501046_0067738_146_1159 294
180 3300049581 Ga0501047_0001919 Ga0501047_0001919_3529_4542 294
181 3300049823 Ga0501044_0000744 Ga0501044_0000744_33218_34156 294

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02219

MTHFR

Methylenetetrahydrofolate reductase

2

286

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
1v93-assembly1.cif.gz_A 5,10-methylenetetrahydrofolate reductase from thermus thermophilus hb8 0.9645 7 292
8eac-assembly1.cif.gz_B thermus thermophilus methylenetetrahydrofolate reductase 0.9514 7 293
8eac-assembly1.cif.gz_A thermus thermophilus methylenetetrahydrofolate reductase 0.9513 7 293
1b5t-assembly1.cif.gz_C escherichia coli methylenetetrahydrofolate reductase 0.9491 17 293
7th5-assembly1.cif.gz_B thermus thermophilus methylenetetrahydrofolate reductase 0.9479 7 292
ID Description Score Start End Superfamily
1v93A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9645 7 292 3.20.20.220
af_Q75HE6_1_304_3.20.20.220 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9491 9 293 3.20.20.220
af_A0A1D6GER4_1_215_3.20.20.220 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9488 89 292 3.20.20.220
1v93A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.9419 7 292 3.20.20.220
af_Q5AEI0_1_296_3.20.20.220 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.932 7 293 3.20.20.220
ID Description Score Start End GO Terms
AF-A0A383EIM3-F1-model_v4 Uncharacterized protein 0.9851 7 219 GO:0004489
GO:0005829
GO:0009086
GO:0035999
GO:0071949
AF-A0A383B240-F1-model_v4 Uncharacterized protein 0.981 25 272 GO:0004489
GO:0005829
GO:0009086
GO:0035999
GO:0071949
AF-A0A6P5UD17-F1-model_v4 deleted 0.9809 34 244
AF-A0A1Z8RQ81-F1-model_v4 Methylenetetrahydrofolate reductase (EC 1.5.1.54) 0.9787 3 293 GO:0005829
GO:0009086
GO:0035999
GO:0071949
GO:0106312
AF-A0A383B240-F1-model_v4 Uncharacterized protein 0.9771 25 272 GO:0004489
GO:0005829
GO:0009086
GO:0035999
GO:0071949

Feature Viewer

pLDDT pTM Quality
91.81 0.91 High
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Predicted Structure (AlphaFold2)

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