F279093

General Info

Members Datasets Scaffolds Average Seq Length
182 144 172 344

Family's Representative Sequence

Representative Sequence 3300009545|Ga0105237_10040950|Ga0105237_100409502
Length 392
Sequence VAFASGLVTESAPPPVKAIHTVLVVDDSAFMRKLIGEMISADPAFHVVGFARNGVDALRQIAQLDPDVVTLDIEMPQLDGMQVLELVMAHAPRRIVVLSAGDEAHGAATMRALELGAVDFVHKPSGPISLDLPVIRDRLISALHTAVSIDINTVRALSQRAAVAVVRVAEQVVVIASSTGGPRALAEVIPALPADLPAAVLIAQHMPKEFTPSLAERLDHASALRVREAVDGESVVGGTVYVGPGGVDLRIVSSADGPRIAIDRGDSCFREGRSGVFPSGDRLFASAASVFGAAVTAVVLTGMGRDGSDGVRTVHAAGGQVIVQDRETSVIFGMPNAALQMRAGAEQGTSLGDIAQRIVTCVHATRLDHSDHTVARPRTNAHTTAGATRVHR

Samples

Sample ID Description Type Environment
1 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
2 2643221733 Bosea sp. Root381 Isolate Unclassified
3 2643221734 Bosea sp. Root670 Isolate Unclassified
4 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
5 2818991467 Bosea vestrisii 3192 Isolate Unclassified
6 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
7 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
8 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
9 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
10 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
11 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
14 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
15 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
18 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
19 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
41 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
45 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
64 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
65 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
68 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
69 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
70 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
71 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
74 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
75 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
79 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
80 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
81 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
82 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
83 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
85 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
86 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
89 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
94 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
95 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
96 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
97 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
98 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
99 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
100 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
101 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
102 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
105 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
106 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
107 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
110 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
111 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
112 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
119 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
122 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
123 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
124 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
127 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
128 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
129 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
130 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
131 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
132 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
133 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
134 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
135 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
136 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
140 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
141 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
142 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
143 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
144 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.51
Metatranscriptomes 0
Isolates 5.49

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.14
Nodule 2.75
Rhizoplane 0.55
Rhizosphere 82.42
Stem 0
Stem Tuber 0
Unclassified 7.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000028 3300003187 Bacteria 208373
2 rootH2_10070163 3300003320 Bacteria 10894
3 Ga0055526_1000271 3300003771 Bacteria 43835
4 Ga0055526_1000609 3300003771 Bacteria 27783
5 Ga0055524_1000043 3300003775 Bacteria 152518
6 Ga0055524_1009548 3300003775 Bacteria 3934
7 Ga0065715_10159896 3300005293 Unclassified 1640
8 Ga0070658_10002063 3300005327 Bacteria 16847
9 Ga0070658_10024986 3300005327 Bacteria 4791
10 Ga0070683_100011777 3300005329 Bacteria 7574
11 Ga0070683_100192313 3300005329 Unclassified 1938
12 Ga0070680_100003638 3300005336 Bacteria 11517
13 Ga0070660_100008197 3300005339 Bacteria 7303
14 Ga0070659_100036377 3300005366 Bacteria 3839
15 Ga0070709_10011593 3300005434 Bacteria 4917
16 Ga0070714_100000298 3300005435 Bacteria 37801
17 Ga0070714_100004629 3300005435 Bacteria 10384
18 Ga0070681_10014890 3300005458 Bacteria 7732
19 Ga0070681_10029281 3300005458 Bacteria 5529
20 Ga0070685_10011300 3300005466 Bacteria 4675
21 Ga0070706_100133620 3300005467 Bacteria 2316
22 Ga0070707_100051331 3300005468 Bacteria 3955
23 Ga0070707_100088928 3300005468 Bacteria 2988
24 Ga0070699_100203906 3300005518 Bacteria 1759
25 Ga0070679_100001270 3300005530 Bacteria 22282
26 Ga0070679_100303788 3300005530 Bacteria 1546
27 Ga0068853_100106872 3300005539 Bacteria 2481
28 Ga0070672_100150360 3300005543 Bacteria 1926
29 Ga0070664_100012304 3300005564 Bacteria 6954
30 Ga0068852_100003722 3300005616 Bacteria 10692
31 Ga0070717_10055623 3300006028 Bacteria 3266
32 Ga0070712_100075221 3300006175 Bacteria 2428
33 Ga0075428_100164604 3300006844 Bacteria 2406
34 Ga0079104_1000237 3300006946 Bacteria 73833
35 Ga0075435_100340910 3300007076 Bacteria 1284
36 Ga0111539_10063838 3300009094 Bacteria 4357
37 Ga0105237_10040950 3300009545 Bacteria 4673
38 Ga0157373_10288486 3300013100 Bacteria 1164
39 Ga0171462_1006 3300013250 Bacteria 432986
40 Ga0157372_10023521 3300013307 Bacteria 6680
41 Ga0157372_10180929 3300013307 Bacteria 2440
42 Ga0157379_10012759 3300014968 Bacteria 7348
43 Ga0183363_1004 3300015690 Bacteria 416766
44 Ga0183361_10074 3300016635 Bacteria 3025
45 Ga0213875_10000702 3300021388 Bacteria 25867
46 Ga0209675_1000604 3300025291 Bacteria 25794
47 Ga0209025_1000008 3300025294 Bacteria 1130876
48 Ga0209564_1000041 3300025295 Bacteria 405199
49 Ga0209564_1000065 3300025295 Bacteria 315205
50 Ga0209256_1000014 3300025299 Bacteria 687409
51 Ga0209256_1000208 3300025299 Bacteria 110551
52 Ga0207705_10001171 3300025909 Bacteria 21308
53 Ga0207707_10003915 3300025912 Bacteria 13214
54 Ga0207707_10031020 3300025912 Bacteria 4676
55 Ga0207693_10001505 3300025915 Bacteria 20575
56 Ga0207693_10100065 3300025915 Bacteria 2273
57 Ga0207663_10242570 3300025916 Bacteria 1322
58 Ga0207660_10009497 3300025917 Bacteria 6296
59 Ga0207657_10008527 3300025919 Bacteria 10394
60 Ga0207652_10002722 3300025921 Bacteria 14825
61 Ga0207646_10149380 3300025922 Bacteria 2107
62 Ga0207646_10170770 3300025922 Bacteria 1963
63 Ga0207664_10000289 3300025929 Bacteria 37841
64 Ga0207661_10006008 3300025944 Bacteria 8574
65 Ga0207639_10090052 3300026041 Bacteria 2453
66 Ga0207698_10060237 3300026142 Bacteria 2951
67 Ga0209281_1000126 3300027111 Bacteria 200088
68 Ga0265319_1010501 3300028563 Bacteria 3858
69 Ga0265318_10010501 3300028577 Bacteria 4031
70 Ga0265338_10022583 3300028800 Bacteria 6506
71 Ga0265338_10028422 3300028800 Bacteria 5577
72 Ga0265338_10106280 3300028800 Bacteria 2273
73 Ga0265332_10049610 3300031238 Bacteria 1805
74 Ga0265320_10005742 3300031240 Bacteria 7916
75 Ga0265329_10029862 3300031242 Bacteria 1779
76 Ga0265339_10060604 3300031249 Bacteria 2039
77 Ga0265339_10097289 3300031249 Bacteria 1536
78 Ga0265331_10022553 3300031250 Bacteria 3212
79 Ga0265316_10019495 3300031344 Bacteria 5800
80 Ga0265314_10008915 3300031711 Bacteria 8554
81 Ga0265314_10013848 3300031711 Bacteria 6493
82 Ga0265342_10038157 3300031712 Bacteria 2927
83 Ga0307412_10004621 3300031911 Bacteria 7677
84 Ga0307412_10005126 3300031911 Bacteria 7336
85 Ga0307409_100024955 3300031995 Bacteria 4182
86 Ga0307416_100121862 3300032002 Bacteria 2326
87 Ga0307416_100230305 3300032002 Bacteria 1786
88 Ga0307414_10000147 3300032004 Bacteria 47511
89 Ga0373959_0000318 3300034820 Bacteria 9918
90 Ga0373940_0027693 3300035088 Bacteria 1491
91 Ga0373945_0013810 3300035116 Unclassified 2700
92 Ga0373943_0012809 3300035170 Unclassified 3780
93 Ga0373935_0004521 3300035692 Bacteria 8178
94 Ga0373927_0004168 3300035695 Bacteria 10158
95 Ga0316582_0098481 3300036647 Unclassified 1934
96 Ga0373925_0030716 3300037068 Bacteria 3944
97 Ga0436364_0966658 3300037853 Bacteria 266758
98 Ga0451577_0006514 3300042876 Bacteria 11626
99 Ga0451577_0059907 3300042876 Bacteria 3394
100 Ga0451577_0091290 3300042876 Bacteria 2718
101 Ga0451577_0135113 3300042876 Unclassified 2215
102 Ga0453683_0015427 3300044673 Bacteria 4947
103 Ga0453683_0020823 3300044673 Bacteria 4190
104 Ga0453683_0027589 3300044673 Bacteria 3599
105 Ga0453683_0028252 3300044673 Bacteria 3552
106 Ga0453684_0037939 3300044712 Bacteria 6602
107 Ga0453684_0056196 3300044712 Bacteria 5107
108 Ga0453684_0096068 3300044712 Bacteria 3641
109 Ga0466960_0051223 3300044901 Bacteria 1993
110 Ga0451576_0000463 3300045051 Bacteria 91861
111 Ga0451576_0001550 3300045051 Bacteria 38718
112 Ga0451576_0066418 3300045051 Bacteria 3755
113 Ga0466967_0200443 3300045976 Bacteria 1890
114 Ga0466967_0529764 3300045976 Unclassified 1158
115 Ga0495580_0007825 3300046472 Bacteria 8555
116 Ga0495582_0005089 3300046473 Bacteria 7361
117 Ga0495639_0000449 3300046475 Bacteria 19548
118 Ga0495630_0023087 3300046517 Bacteria 4597
119 Ga0495643_0003008 3300046522 Bacteria 12680
120 Ga0495643_0071091 3300046522 Bacteria 1827
121 Ga0495665_0000499 3300046531 Bacteria 19756
122 Ga0495635_0033172 3300046663 Bacteria 3581
123 Ga0495588_0015802 3300046674 Bacteria 3639
124 Ga0495658_0000425 3300046683 Bacteria 23560
125 Ga0495613_0075643 3300046689 Bacteria 2451
126 Ga0495581_0035245 3300047315 Bacteria 2895
127 Ga0495686_0000007 3300047472 Bacteria 732622
128 Ga0495593_0000455 3300047673 Bacteria 22985
129 Ga0495614_0000334 3300048089 Bacteria 18608
130 Ga0496113_0058432 3300048916 Bacteria 2902
131 Ga0496117_0061318 3300048920 Bacteria 2586
132 Ga0496122_0017997 3300048925 Bacteria 6556
133 Ga0496122_0081314 3300048925 Bacteria 2255
134 Ga0496122_0132405 3300048925 Bacteria 1581
135 Ga0496123_0066981 3300048926 Bacteria 2270
136 Ga0496126_0000101 3300048929 Bacteria 201606
137 Ga0501034_0384482 3300049571 Bacteria 1328
138 Ga0501036_0060670 3300049572 Bacteria 3204
139 Ga0501037_0063111 3300049573 Bacteria 2701
140 Ga0501038_0203945 3300049574 Bacteria 1585
141 Ga0501039_0056733 3300049575 Bacteria 3034
142 Ga0501043_0021835 3300049579 Bacteria 5020
143 Ga0501046_0002829 3300049580 Bacteria 16153
144 Ga0501046_0107660 3300049580 Bacteria 2133
145 Ga0501047_0011135 3300049581 Bacteria 8512
146 Ga0501067_0025378 3300049583 Bacteria 3285
147 Ga0501070_0050280 3300049586 Bacteria 3461
148 Ga0501070_0213651 3300049586 Bacteria 1583
149 Ga0501072_0011204 3300049588 Bacteria 6844
150 Ga0501073_0015485 3300049589 Bacteria 5533
151 Ga0501074_0061954 3300049590 Bacteria 2695
152 Ga0501075_0017522 3300049591 Bacteria 5175
153 Ga0501076_0018147 3300049592 Bacteria 5358
154 Ga0501077_0008908 3300049593 Bacteria 6226
155 Ga0501198_005121 3300049649 Bacteria 1837
156 Ga0501223_000256 3300049663 Bacteria 13526
157 Ga0501224_000034 3300049664 Bacteria 37769
158 Ga0501225_0000865 3300049705 Bacteria 9405
159 Ga0501234_000244 3300049707 Bacteria 7858
160 Ga0501079_0029174 3300049741 Bacteria 4234
161 Ga0501080_0020001 3300049742 Bacteria 6197
162 Ga0501035_0381934 3300049822 Bacteria 1175
163 Ga0501044_0022077 3300049823 Bacteria 6787
164 Ga0501045_0035653 3300049824 Bacteria 3612
165 Ga0501226_000038 3300049853 Bacteria 64184
166 nmdc:mga08y16_11190_c1 3300050511 Bacteria 9424
167 Ga0500616_0009850 3300053153 Bacteria 5762
168 Ga0500616_0021173 3300053153 Bacteria 3649
169 Ga0590071_011385 3300059421 Bacteria 2082
170 Ga0501082_0057175 3300060353 Bacteria 3361
171 Ga0530510_0014754 3300061734 Bacteria 5517
172 Ga0530510_0172005 3300061734 Bacteria 1604

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049822 Ga0501035_0381934 Ga0501035_0381934_41_988 270
2 3300035116 Ga0373945_0013810 Ga0373945_0013810_578_1636 287
3 3300035170 Ga0373943_0012809 Ga0373943_0012809_376_1434 287
4 3300035692 Ga0373935_0004521 Ga0373935_0004521_43_1101 287
5 3300035695 Ga0373927_0004168 Ga0373927_0004168_8058_9116 287
6 3300037068 Ga0373925_0030716 Ga0373925_0030716_1705_2763 287
7 3300046472 Ga0495580_0007825 Ga0495580_0007825_1250_2308 287
8 3300046473 Ga0495582_0005089 Ga0495582_0005089_56_1114 287
9 3300046475 Ga0495639_0000449 Ga0495639_0000449_9303_10361 287
10 3300046517 Ga0495630_0023087 Ga0495630_0023087_1261_2319 287
11 3300046531 Ga0495665_0000499 Ga0495665_0000499_9209_10267 287
12 3300046663 Ga0495635_0033172 Ga0495635_0033172_2412_3470 287
13 3300046674 Ga0495588_0015802 Ga0495588_0015802_1212_2270 287
14 3300046683 Ga0495658_0000425 Ga0495658_0000425_6642_7700 287
15 3300046689 Ga0495613_0075643 Ga0495613_0075643_24_1082 287
16 3300047315 Ga0495581_0035245 Ga0495581_0035245_795_1853 287
17 3300047673 Ga0495593_0000455 Ga0495593_0000455_10242_11300 287
18 3300048089 Ga0495614_0000334 Ga0495614_0000334_6882_7940 287
19 3300036647 Ga0316582_0098481 Ga0316582_0098481_12_980 289
20 3300044901 Ga0466960_0051223 Ga0466960_0051223_744_1790 298
21 3300025915 Ga0207693_10001505 Ga0207693_100015057 301
22 3300049583 Ga0501067_0025378 Ga0501067_0025378_2114_3163 302
23 3300013307 Ga0157372_10023521 Ga0157372_100235216 304
24 3300044712 Ga0453684_0096068 Ga0453684_0096068_924_2186 305
25 3300005435 Ga0070714_100004629 Ga0070714_10000462912 306
26 3300013307 Ga0157372_10180929 Ga0157372_101809292 306
27 3300005467 Ga0070706_100133620 Ga0070706_1001336203 307
28 3300005468 Ga0070707_100051331 Ga0070707_1000513314 307
29 3300025915 Ga0207693_10100065 Ga0207693_101000652 307
30 3300005293 Ga0065715_10159896 Ga0065715_101598962 308
31 3300007076 Ga0075435_100340910 Ga0075435_1003409102 308
32 3300013100 Ga0157373_10288486 Ga0157373_102884861 308
33 3300016635 Ga0183361_10074 Ga0183361_100742 308
34 3300045976 Ga0466967_0200443 Ga0466967_0200443_741_1751 308
35 3300005434 Ga0070709_10011593 Ga0070709_100115935 309
36 3300031249 Ga0265339_10060604 Ga0265339_100606042 309
37 3300031250 Ga0265331_10022553 Ga0265331_100225532 309
38 3300061734 Ga0530510_0172005 Ga0530510_0172005_330_1346 309
39 3300006028 Ga0070717_10055623 Ga0070717_100556232 310
40 3300025929 Ga0207664_10000289 Ga0207664_1000028919 310
41 3300005530 Ga0070679_100303788 Ga0070679_1003037881 311
42 3300042876 Ga0451577_0091290 Ga0451577_0091290_962_1984 311
43 3300044673 Ga0453683_0027589 Ga0453683_0027589_371_1393 311
44 3300044673 Ga0453683_0028252 Ga0453683_0028252_2160_3182 311
45 3300044712 Ga0453684_0056196 Ga0453684_0056196_2181_3203 311
46 3300047472 Ga0495686_0000007 Ga0495686_0000007_624542_625579 311
47 3300006844 Ga0075428_100164604 Ga0075428_1001646042 312
48 3300028800 Ga0265338_10106280 Ga0265338_101062802 312
49 3300044673 Ga0453683_0015427 Ga0453683_0015427_1677_2696 312
50 3300045051 Ga0451576_0000463 Ga0451576_0000463_30210_31364 312
51 3300045051 Ga0451576_0066418 Ga0451576_0066418_962_1981 312
52 3300005458 Ga0070681_10029281 Ga0070681_100292815 313
53 3300005468 Ga0070707_100088928 Ga0070707_1000889282 313
54 3300025912 Ga0207707_10031020 Ga0207707_100310202 313
55 3300025922 Ga0207646_10149380 Ga0207646_101493802 313
56 3300049572 Ga0501036_0060670 Ga0501036_0060670_1075_2151 313
57 3300049573 Ga0501037_0063111 Ga0501037_0063111_1489_2565 313
58 3300049575 Ga0501039_0056733 Ga0501039_0056733_459_1535 313
59 3300049586 Ga0501070_0213651 Ga0501070_0213651_232_1308 313
60 3300049588 Ga0501072_0011204 Ga0501072_0011204_3311_4387 313
61 3300049590 Ga0501074_0061954 Ga0501074_0061954_35_1111 313
62 3300049591 Ga0501075_0017522 Ga0501075_0017522_1356_2432 313
63 3300049592 Ga0501076_0018147 Ga0501076_0018147_2123_3199 313
64 3300049593 Ga0501077_0008908 Ga0501077_0008908_1092_2168 313
65 3300049741 Ga0501079_0029174 Ga0501079_0029174_1124_2200 313
66 3300049742 Ga0501080_0020001 Ga0501080_0020001_2699_3775 313
67 3300049824 Ga0501045_0035653 Ga0501045_0035653_970_2046 313
68 3300060353 Ga0501082_0057175 Ga0501082_0057175_31_1107 313
69 3300061734 Ga0530510_0014754 Ga0530510_0014754_4066_5142 313
70 3300005466 Ga0070685_10011300 Ga0070685_100113002 314
71 3300034820 Ga0373959_0000318 Ga0373959_0000318_4052_5308 314
72 3300035088 Ga0373940_0027693 Ga0373940_0027693_149_1189 314
73 3300049571 Ga0501034_0384482 Ga0501034_0384482_143_1180 314
74 3300049586 Ga0501070_0050280 Ga0501070_0050280_849_1886 314
75 3300049589 Ga0501073_0015485 Ga0501073_0015485_1922_2959 314
76 3300049823 Ga0501044_0022077 Ga0501044_0022077_4906_5943 314
77 3300059421 Ga0590071_011385 Ga0590071_011385_898_1974 314
78 iso_pu_bacteria 2713897090 2715499666 314
79 3300005518 Ga0070699_100203906 Ga0070699_1002039062 315
80 3300006946 Ga0079104_1000237 Ga0079104_10002372 315
81 3300027111 Ga0209281_1000126 Ga0209281_100012627 315
82 3300028563 Ga0265319_1010501 Ga0265319_10105012 315
83 3300031240 Ga0265320_10005742 Ga0265320_100057426 315
84 3300031711 Ga0265314_10008915 Ga0265314_100089152 315
85 3300042876 Ga0451577_0059907 Ga0451577_0059907_1230_2285 315
86 3300046522 Ga0495643_0003008 Ga0495643_0003008_3511_4551 315
87 3300048929 Ga0496126_0000101 Ga0496126_0000101_100809_101930 315
88 3300049574 Ga0501038_0203945 Ga0501038_0203945_182_1228 315
89 3300049579 Ga0501043_0021835 Ga0501043_0021835_3545_4591 315
90 3300049580 Ga0501046_0107660 Ga0501046_0107660_792_1838 315
91 3300049581 Ga0501047_0011135 Ga0501047_0011135_3203_4249 315
92 3300044673 Ga0453683_0020823 Ga0453683_0020823_2679_3782 316
93 3300045051 Ga0451576_0001550 Ga0451576_0001550_36416_37519 316
94 3300049580 Ga0501046_0002829 Ga0501046_0002829_11980_13029 316
95 3300014968 Ga0157379_10012759 Ga0157379_100127592 317
96 3300028800 Ga0265338_10028422 Ga0265338_100284225 317
97 3300042876 Ga0451577_0135113 Ga0451577_0135113_122_1180 317
98 3300045976 Ga0466967_0529764 Ga0466967_0529764_84_1133 317
99 3300005327 Ga0070658_10024986 Ga0070658_100249862 318
100 3300025922 Ga0207646_10170770 Ga0207646_101707703 318
101 3300005327 Ga0070658_10002063 Ga0070658_100020634 319
102 3300005339 Ga0070660_100008197 Ga0070660_1000081975 319
103 3300005435 Ga0070714_100000298 Ga0070714_10000029820 319
104 3300032002 Ga0307416_100230305 Ga0307416_1002303052 319
105 3300042876 Ga0451577_0006514 Ga0451577_0006514_1790_2848 319
106 3300031911 Ga0307412_10004621 Ga0307412_100046214 320
107 3300032004 Ga0307414_10000147 Ga0307414_1000014713 320
108 3300049649 Ga0501198_005121 Ga0501198_005121_474_1523 320
109 3300049663 Ga0501223_000256 Ga0501223_000256_7685_8734 320
110 3300049664 Ga0501224_000034 Ga0501224_000034_5540_6589 320
111 3300049705 Ga0501225_0000865 Ga0501225_0000865_4331_5380 320
112 3300049707 Ga0501234_000244 Ga0501234_000244_2265_3314 320
113 3300049853 Ga0501226_000038 Ga0501226_000038_5540_6589 320
114 iso_pu_bacteria 2897803580 2897805141 320
115 3300006175 Ga0070712_100075221 Ga0070712_1000752211 321
116 3300015690 Ga0183363_1004 Ga0183363_1004100 321
117 3300028577 Ga0265318_10010501 Ga0265318_100105013 321
118 3300031242 Ga0265329_10029862 Ga0265329_100298622 321
119 3300031249 Ga0265339_10097289 Ga0265339_100972891 321
120 3300031344 Ga0265316_10019495 Ga0265316_100194951 321
121 3300031712 Ga0265342_10038157 Ga0265342_100381572 321
122 3300053153 Ga0500616_0021173 Ga0500616_0021173_882_1946 321
123 3300028800 Ga0265338_10022583 Ga0265338_100225839 322
124 3300031238 Ga0265332_10049610 Ga0265332_100496102 322
125 3300031711 Ga0265314_10013848 Ga0265314_100138486 322
126 iso_pu_bacteria 2547132103 2547374606 322
127 iso_pu_bacteria 2843690924 2843691932 322
128 3300003320 rootH2_10070163 rootH2_1007016311 323
129 3300021388 Ga0213875_10000702 Ga0213875_1000070215 323
130 3300025916 Ga0207663_10242570 Ga0207663_102425702 323
131 3300037853 Ga0436364_0966658 Ga0436364_0966658_199106_200239 323
132 3300005329 Ga0070683_100011777 Ga0070683_1000117775 324
133 3300005329 Ga0070683_100192313 Ga0070683_1001923132 324
134 3300005336 Ga0070680_100003638 Ga0070680_1000036389 324
135 3300005458 Ga0070681_10014890 Ga0070681_100148908 324
136 3300005530 Ga0070679_100001270 Ga0070679_10000127011 324
137 3300005564 Ga0070664_100012304 Ga0070664_1000123043 324
138 3300005616 Ga0068852_100003722 Ga0068852_10000372211 324
139 3300025912 Ga0207707_10003915 Ga0207707_100039159 324
140 3300025917 Ga0207660_10009497 Ga0207660_100094978 324
141 3300025921 Ga0207652_10002722 Ga0207652_100027228 324
142 3300025944 Ga0207661_10006008 Ga0207661_100060085 324
143 3300026142 Ga0207698_10060237 Ga0207698_100602374 324
144 3300005543 Ga0070672_100150360 Ga0070672_1001503602 325
145 3300009094 Ga0111539_10063838 Ga0111539_100638384 326
146 3300031911 Ga0307412_10005126 Ga0307412_100051264 326
147 3300031995 Ga0307409_100024955 Ga0307409_1000249556 326
148 3300032002 Ga0307416_100121862 Ga0307416_1001218623 326
149 3300050511 nmdc:mga08y16_11190_c1 nmdc:mga08y16_11190_c1_1649_2749 326
150 3300005366 Ga0070659_100036377 Ga0070659_1000363772 327
151 3300005539 Ga0068853_100106872 Ga0068853_1001068723 327
152 3300025909 Ga0207705_10001171 Ga0207705_1000117120 327
153 3300025919 Ga0207657_10008527 Ga0207657_100085277 327
154 3300026041 Ga0207639_10090052 Ga0207639_100900523 327
155 3300044712 Ga0453684_0037939 Ga0453684_0037939_5329_6411 327
156 3300048925 Ga0496122_0132405 Ga0496122_0132405_249_1340 328
157 iso_pu_bacteria 2643221734 2644734923 328
158 iso_pu_bacteria 2818991467 2819719473 328
159 iso_pu_bacteria 2917699015 2917704652 328
160 3300003775 Ga0055524_1009548 Ga0055524_10095483 329
161 3300025299 Ga0209256_1000208 Ga0209256_100020850 329
162 3300048920 Ga0496117_0061318 Ga0496117_0061318_1449_2546 329
163 3300048925 Ga0496122_0017997 Ga0496122_0017997_864_1961 329
164 iso_pu_bacteria 2841911363 2841912829 329
165 iso_pu_bacteria 2841917233 2841918576 329
166 3300003771 Ga0055526_1000609 Ga0055526_10006093 330
167 3300009545 Ga0105237_10040950 Ga0105237_100409502 330
168 3300025295 Ga0209564_1000065 Ga0209564_1000065157 330
169 3300003771 Ga0055526_1000271 Ga0055526_10002719 331
170 3300003775 Ga0055524_1000043 Ga0055524_100004325 331
171 3300025291 Ga0209675_1000604 Ga0209675_10006048 331
172 3300025295 Ga0209564_1000041 Ga0209564_1000041403 331
173 3300025299 Ga0209256_1000014 Ga0209256_1000014263 331
174 iso_pu_bacteria 2643221733 2644732284 331
175 3300003187 JGI25151J46595_10000028 JGI25151J46595_10000028177 332
176 3300013250 Ga0171462_1006 Ga0171462_100650 332
177 3300025294 Ga0209025_1000008 Ga0209025_1000008733 332
178 3300046522 Ga0495643_0071091 Ga0495643_0071091_72_1157 332
179 3300048916 Ga0496113_0058432 Ga0496113_0058432_433_1533 332
180 3300048925 Ga0496122_0081314 Ga0496122_0081314_758_1858 332
181 3300048926 Ga0496123_0066981 Ga0496123_0066981_403_1503 332
182 3300053153 Ga0500616_0009850 Ga0500616_0009850_3433_4518 332

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01339

CheB_methylest

CheB methylesterase

173

358

0.92

PF00072

Response_reg

Response regulator receiver domain

22

134

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1chd-assembly1.cif.gz_A cheb methylesterase domain 0.9665 136 323
3sft-assembly1.cif.gz_A crystal structure of thermotoga maritima cheb methylesterase catalytic domain 0.9527 136 322
3sft-assembly1.cif.gz_A crystal structure of thermotoga maritima cheb methylesterase catalytic domain 0.9381 136 322
6lgq-assembly1.cif.gz_D the crystal complex structure of histidine kinase and response regulator 0.9321 12 132
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9284 12 132
ID Description Score Start End Superfamily
3sftA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylesterase CheB, C-terminal domain 0.9527 136 322 3.40.50.180
3c3wB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9489 11 88 3.40.50.2300
af_P07330_147_349_3.40.50.180 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylesterase CheB, C-terminal domain 0.9383 134 330 3.40.50.180
3sftA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylesterase CheB, C-terminal domain 0.9381 136 322 3.40.50.180
af_P21866_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9248 12 91 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A381EZK3-F1-model_v4 deleted 0.9909 243 323
AF-A0A1V5JTA8-F1-model_v4 protein-glutamate methylesterase (EC 3.1.1.61) 0.9766 137 322 GO:0000156
GO:0005737
GO:0006935
GO:0008984
AF-A0A3N5XFV7-F1-model_v4 deleted 0.9671 232 325
AF-A0A1W9LM16-F1-model_v4 protein-glutamate methylesterase (EC 3.1.1.61) 0.9602 172 323 GO:0000156
GO:0005737
GO:0006935
GO:0008984
AF-A0A849WGW8-F1-model_v4 Response regulator 0.9597 4 116 GO:0000160

Feature Viewer

pLDDT pTM Quality
84.94 0.64 Medium
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Predicted Structure (AlphaFold2)

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