F279162
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 182 | 129 | 175 | 260 |
Family's Representative Sequence
| Representative Sequence | 3300014325|Ga0163163_10059748|Ga0163163_100597483 |
| Length | 273 |
| Sequence | LRTASARPKLVVMSDIPTTAEIKPAATILLLRDTPAFEVLMVKRHHQIDFASGALVFPGGKSHAGDHHPDWAEHVLGWDAYDAEQRGLRIAAIREVFEEAGILLAKRRDGAPMSGEACPMEVRQAVDAGTMDFLDVVRDLEARLDLSALTVFARWITPPLTPKRFDTWFYAVNAPAEQVAACDGRETVDAEWIAPAEALRLAAEGARKVIFPTRMNLQLLAEARGAEDAVARAVARTLVTVQPQIQSRPSGRVLVLPPDAGYGVVEEPLENVM |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221552 | Caulobacter sp. Root1472 | Isolate | Unclassified |
| 2 | 2643221598 | Phenylobacterium sp. Root700 | Isolate | Unclassified |
| 3 | 2643221614 | Phenylobacterium sp. Root77 | Isolate | Unclassified |
| 4 | 2643221661 | Phenylobacterium sp. Root1277 | Isolate | Unclassified |
| 5 | 2643221666 | Phenylobacterium sp. Root1290 | Isolate | Unclassified |
| 6 | 2884960567 | Caulobacter sp. 602-1 | Isolate | Rhizosphere |
| 7 | 2895880812 | Frankia sp. BMG5.11 | Isolate | Unclassified |
| 8 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 9 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 10 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 11 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 12 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 13 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 16 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 21 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 22 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 23 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 25 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 27 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 28 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 29 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 30 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 31 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 32 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 43 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 44 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 45 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 46 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 47 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 74 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 75 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 76 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 77 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 78 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 79 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 80 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 81 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 82 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 83 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 84 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 85 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 86 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 87 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 88 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 89 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 90 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 91 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 92 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046528 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046648 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046684 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047318 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 104 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 105 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 106 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 107 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 108 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 109 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 110 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 111 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 112 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 113 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049584 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 120 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 122 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 123 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 124 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 125 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 126 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 127 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 128 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 129 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 96.15 |
| Metatranscriptomes | 0 |
| Isolates | 3.85 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 11.54 |
| Nodule | 0 |
| Rhizoplane | 6.59 |
| Rhizosphere | 74.18 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 7.69 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25153J46596_10039801 | 3300003215 | Bacteria | 1465 |
| 2 | JGI25153J46596_10051511 | 3300003215 | Bacteria | 1178 |
| 3 | rootL2_10092184 | 3300003322 | Bacteria | 3160 |
| 4 | Ga0055530_10002158 | 3300003791 | Bacteria | 13038 |
| 5 | Ga0055531_10005437 | 3300003794 | Bacteria | 7458 |
| 6 | Ga0055531_10023329 | 3300003794 | Bacteria | 2325 |
| 7 | Ga0065165_1000567 | 3300005262 | Bacteria | 54897 |
| 8 | Ga0065165_1009443 | 3300005262 | Bacteria | 4374 |
| 9 | Ga0070658_10664200 | 3300005327 | Bacteria | 904 |
| 10 | Ga0070670_100082136 | 3300005331 | Bacteria | 2769 |
| 11 | Ga0070680_100004537 | 3300005336 | Bacteria | 10450 |
| 12 | Ga0070671_100035689 | 3300005355 | Bacteria | 4119 |
| 13 | Ga0070671_100052298 | 3300005355 | Bacteria | 3396 |
| 14 | Ga0070673_100311679 | 3300005364 | Bacteria | 1388 |
| 15 | Ga0070659_100002244 | 3300005366 | Bacteria | 13748 |
| 16 | Ga0070659_100003275 | 3300005366 | Bacteria | 11522 |
| 17 | Ga0070659_100006024 | 3300005366 | Bacteria | 8742 |
| 18 | Ga0070662_100071660 | 3300005457 | Bacteria | 2556 |
| 19 | Ga0070681_10009125 | 3300005458 | Bacteria | 9746 |
| 20 | Ga0070679_100018212 | 3300005530 | Bacteria | 6811 |
| 21 | Ga0068853_100060302 | 3300005539 | Bacteria | 3278 |
| 22 | Ga0068853_100079029 | 3300005539 | Bacteria | 2876 |
| 23 | Ga0068853_100187313 | 3300005539 | Bacteria | 1879 |
| 24 | Ga0070665_100001035 | 3300005548 | Bacteria | 34841 |
| 25 | Ga0070665_100014956 | 3300005548 | Bacteria | 7790 |
| 26 | Ga0070665_100778429 | 3300005548 | Bacteria | 970 |
| 27 | Ga0068855_100080595 | 3300005563 | Bacteria | 3774 |
| 28 | Ga0070664_100019987 | 3300005564 | Bacteria | 5513 |
| 29 | Ga0068854_100040757 | 3300005578 | Bacteria | 3278 |
| 30 | Ga0068852_100148360 | 3300005616 | Bacteria | 2178 |
| 31 | Ga0068864_100011765 | 3300005618 | Bacteria | 7228 |
| 32 | Ga0068864_100037338 | 3300005618 | Bacteria | 4146 |
| 33 | Ga0068858_100117668 | 3300005842 | Bacteria | 2484 |
| 34 | Ga0075366_10005354 | 3300006195 | Bacteria | 6953 |
| 35 | Ga0068865_100001958 | 3300006881 | Bacteria | 12151 |
| 36 | Ga0105240_10004233 | 3300009093 | Bacteria | 21941 |
| 37 | Ga0105240_10021375 | 3300009093 | Bacteria | 8607 |
| 38 | Ga0105240_10078899 | 3300009093 | Bacteria | 4053 |
| 39 | Ga0105240_10109305 | 3300009093 | Bacteria | 3348 |
| 40 | Ga0105240_10149256 | 3300009093 | Bacteria | 2786 |
| 41 | Ga0105245_10530789 | 3300009098 | Bacteria | 1197 |
| 42 | Ga0105248_10143641 | 3300009177 | Bacteria | 2693 |
| 43 | Ga0105238_10020569 | 3300009551 | Bacteria | 6720 |
| 44 | Ga0105238_10089287 | 3300009551 | Bacteria | 3069 |
| 45 | Ga0105249_10663734 | 3300009553 | Bacteria | 1101 |
| 46 | Ga0105239_10444743 | 3300010375 | Bacteria | 1470 |
| 47 | Ga0157373_10000718 | 3300013100 | Bacteria | 25910 |
| 48 | Ga0157373_10001287 | 3300013100 | Bacteria | 19152 |
| 49 | Ga0163162_10186743 | 3300013306 | Bacteria | 2200 |
| 50 | Ga0157375_10008150 | 3300013308 | Bacteria | 9168 |
| 51 | Ga0163163_10059748 | 3300014325 | Bacteria | 3772 |
| 52 | Ga0163163_10231556 | 3300014325 | Bacteria | 1897 |
| 53 | Ga0213872_10031870 | 3300021361 | Bacteria | 2416 |
| 54 | Ga0209026_1004423 | 3300025250 | Bacteria | 4162 |
| 55 | Ga0209026_1006855 | 3300025250 | Bacteria | 2693 |
| 56 | Ga0209758_1003931 | 3300025297 | Bacteria | 12946 |
| 57 | Ga0209050_1000161 | 3300025298 | Bacteria | 155713 |
| 58 | Ga0209050_1008470 | 3300025298 | Bacteria | 5487 |
| 59 | Ga0209257_1000252 | 3300025304 | Bacteria | 123718 |
| 60 | Ga0209257_1000552 | 3300025304 | Bacteria | 64315 |
| 61 | Ga0209257_1001428 | 3300025304 | Bacteria | 28367 |
| 62 | Ga0207680_10082996 | 3300025903 | Bacteria | 2018 |
| 63 | Ga0207705_10000667 | 3300025909 | Bacteria | 28527 |
| 64 | Ga0207707_10061427 | 3300025912 | Bacteria | 3269 |
| 65 | Ga0207695_10001217 | 3300025913 | Bacteria | 44094 |
| 66 | Ga0207695_10002434 | 3300025913 | Bacteria | 27508 |
| 67 | Ga0207695_10109164 | 3300025913 | Bacteria | 2749 |
| 68 | Ga0207660_10021189 | 3300025917 | Bacteria | 4369 |
| 69 | Ga0207660_10553386 | 3300025917 | Bacteria | 936 |
| 70 | Ga0207657_10001265 | 3300025919 | Bacteria | 26986 |
| 71 | Ga0207649_10248624 | 3300025920 | Bacteria | 1280 |
| 72 | Ga0207652_10003685 | 3300025921 | Bacteria | 12595 |
| 73 | Ga0207652_10009985 | 3300025921 | Bacteria | 7643 |
| 74 | Ga0207694_10105490 | 3300025924 | Bacteria | 2237 |
| 75 | Ga0207650_10645337 | 3300025925 | Bacteria | 892 |
| 76 | Ga0207687_10102127 | 3300025927 | Bacteria | 2112 |
| 77 | Ga0207644_10008608 | 3300025931 | Bacteria | 6674 |
| 78 | Ga0207644_10408791 | 3300025931 | Bacteria | 1110 |
| 79 | Ga0207690_10000112 | 3300025932 | Bacteria | 66622 |
| 80 | Ga0207690_10012165 | 3300025932 | Bacteria | 5150 |
| 81 | Ga0207706_10106085 | 3300025933 | Bacteria | 2472 |
| 82 | Ga0207704_10009459 | 3300025938 | Bacteria | 4703 |
| 83 | Ga0207704_10320189 | 3300025938 | Bacteria | 1196 |
| 84 | Ga0207711_10168203 | 3300025941 | Bacteria | 1988 |
| 85 | Ga0207711_10168626 | 3300025941 | Bacteria | 1985 |
| 86 | Ga0207661_10369958 | 3300025944 | Bacteria | 1296 |
| 87 | Ga0207679_10034220 | 3300025945 | Bacteria | 3582 |
| 88 | Ga0207667_10050238 | 3300025949 | Bacteria | 4400 |
| 89 | Ga0207667_10063980 | 3300025949 | Bacteria | 3842 |
| 90 | Ga0207667_10154825 | 3300025949 | Bacteria | 2358 |
| 91 | Ga0207640_10140426 | 3300025981 | Bacteria | 1760 |
| 92 | Ga0207703_10095428 | 3300026035 | Bacteria | 2509 |
| 93 | Ga0207639_10050596 | 3300026041 | Bacteria | 3156 |
| 94 | Ga0207639_10197569 | 3300026041 | Bacteria | 1722 |
| 95 | Ga0207639_10763416 | 3300026041 | Bacteria | 900 |
| 96 | Ga0207676_10021752 | 3300026095 | Bacteria | 4708 |
| 97 | Ga0207676_10031152 | 3300026095 | Bacteria | 4009 |
| 98 | Ga0207675_100764609 | 3300026118 | Bacteria | 978 |
| 99 | Ga0207683_10055542 | 3300026121 | Bacteria | 3472 |
| 100 | Ga0268266_10000311 | 3300028379 | Bacteria | 77262 |
| 101 | Ga0268266_10031217 | 3300028379 | Bacteria | 4523 |
| 102 | Ga0307517_10001709 | 3300028786 | Bacteria | 36251 |
| 103 | Ga0307517_10263635 | 3300028786 | Bacteria | 998 |
| 104 | Ga0265338_10002312 | 3300028800 | Bacteria | 28912 |
| 105 | Ga0265338_10201376 | 3300028800 | Bacteria | 1501 |
| 106 | Ga0307513_10003901 | 3300031456 | Bacteria | 20056 |
| 107 | Ga0307513_10048320 | 3300031456 | Bacteria | 4619 |
| 108 | Ga0307408_100605968 | 3300031548 | Bacteria | 974 |
| 109 | Ga0307413_10032715 | 3300031824 | Bacteria | 2951 |
| 110 | Ga0307413_10220559 | 3300031824 | Bacteria | 1385 |
| 111 | Ga0307411_10341147 | 3300032005 | Bacteria | 1218 |
| 112 | Ga0307510_10036307 | 3300033180 | Bacteria | 5486 |
| 113 | Ga0373936_0004034 | 3300035113 | Bacteria | 5538 |
| 114 | Ga0373927_0000156 | 3300035695 | Bacteria | 53414 |
| 115 | Ga0373925_0000023 | 3300037068 | Bacteria | 158881 |
| 116 | Ga0373925_0202355 | 3300037068 | Bacteria | 1579 |
| 117 | Ga0395899_0230352 | 3300037312 | Bacteria | 1279 |
| 118 | Ga0395905_0053823 | 3300037471 | Bacteria | 3766 |
| 119 | Ga0395905_0298953 | 3300037471 | Bacteria | 1497 |
| 120 | Ga0395905_0466103 | 3300037471 | Bacteria | 1162 |
| 121 | Ga0436360_0602809 | 3300039438 | Bacteria | 1372 |
| 122 | Ga0436361_0097453 | 3300039447 | Bacteria | 7100 |
| 123 | Ga0466968_0057422 | 3300044735 | Bacteria | 1673 |
| 124 | Ga0466970_0136507 | 3300044765 | Bacteria | 1349 |
| 125 | Ga0466957_0178063 | 3300044842 | Bacteria | 1388 |
| 126 | Ga0466960_0177119 | 3300044901 | Bacteria | 1154 |
| 127 | Ga0495606_0003150 | 3300046507 | Bacteria | 17876 |
| 128 | Ga0495610_0001591 | 3300046512 | Bacteria | 19979 |
| 129 | Ga0495620_0119622 | 3300046515 | Bacteria | 1039 |
| 130 | Ga0495637_0010513 | 3300046520 | Bacteria | 4472 |
| 131 | Ga0495642_0012163 | 3300046528 | Bacteria | 3316 |
| 132 | Ga0495642_0119443 | 3300046528 | Bacteria | 1130 |
| 133 | Ga0495621_0098208 | 3300046539 | Bacteria | 1111 |
| 134 | Ga0495668_0120951 | 3300046616 | Bacteria | 1432 |
| 135 | Ga0495668_0179278 | 3300046616 | Bacteria | 1160 |
| 136 | Ga0495611_0013733 | 3300046648 | Bacteria | 3452 |
| 137 | Ga0495669_0000042 | 3300046684 | Bacteria | 87033 |
| 138 | Ga0495669_0103674 | 3300046684 | Bacteria | 1323 |
| 139 | Ga0495636_0154939 | 3300047318 | Bacteria | 1030 |
| 140 | Ga0495672_0003470 | 3300047320 | Bacteria | 13476 |
| 141 | Ga0495672_0166299 | 3300047320 | Bacteria | 1129 |
| 142 | Ga0495686_0045763 | 3300047472 | Bacteria | 2768 |
| 143 | Ga0495686_0339787 | 3300047472 | Bacteria | 819 |
| 144 | Ga0496100_0105398 | 3300048903 | Bacteria | 1950 |
| 145 | Ga0496101_0229678 | 3300048904 | Bacteria | 1442 |
| 146 | Ga0496103_0155610 | 3300048906 | Bacteria | 1465 |
| 147 | Ga0496104_0126067 | 3300048907 | Bacteria | 2459 |
| 148 | Ga0496107_0062370 | 3300048910 | Bacteria | 2701 |
| 149 | Ga0496108_0049801 | 3300048911 | Bacteria | 3504 |
| 150 | Ga0496109_0062507 | 3300048912 | Bacteria | 3405 |
| 151 | Ga0496112_0101655 | 3300048915 | Bacteria | 2844 |
| 152 | Ga0496113_0072718 | 3300048916 | Bacteria | 2618 |
| 153 | Ga0496115_0001449 | 3300048918 | Bacteria | 17010 |
| 154 | Ga0496115_0001572 | 3300048918 | Bacteria | 16416 |
| 155 | Ga0496115_0024756 | 3300048918 | Bacteria | 4668 |
| 156 | Ga0501031_0391659 | 3300049568 | Bacteria | 899 |
| 157 | Ga0501033_0134657 | 3300049570 | Bacteria | 1788 |
| 158 | Ga0501034_0304116 | 3300049571 | Bacteria | 1531 |
| 159 | Ga0501037_0168158 | 3300049573 | Bacteria | 1560 |
| 160 | Ga0501047_0002834 | 3300049581 | Bacteria | 16441 |
| 161 | Ga0501047_0019040 | 3300049581 | Bacteria | 6586 |
| 162 | Ga0501068_0006245 | 3300049584 | Bacteria | 6554 |
| 163 | Ga0501073_0077096 | 3300049589 | Bacteria | 2320 |
| 164 | Ga0501073_0254909 | 3300049589 | Bacteria | 1211 |
| 165 | Ga0501035_0355788 | 3300049822 | Bacteria | 1224 |
| 166 | Ga0501044_0031389 | 3300049823 | Bacteria | 5592 |
| 167 | Ga0501044_0128011 | 3300049823 | Bacteria | 2535 |
| 168 | nmdc:mga07m45_107739_c1 | 3300050496 | Bacteria | 1603 |
| 169 | Ga0500641_0027914 | 3300053096 | Bacteria | 2200 |
| 170 | Ga0500595_003899 | 3300053119 | Bacteria | 6845 |
| 171 | Ga0500608_045590 | 3300053122 | Bacteria | 2106 |
| 172 | Ga0500559_0000112 | 3300053136 | Bacteria | 63817 |
| 173 | Ga0500622_0036537 | 3300053156 | Bacteria | 2567 |
| 174 | Ga0500645_002260 | 3300053730 | Bacteria | 8754 |
| 175 | Ga0501082_0355010 | 3300060353 | Bacteria | 1278 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049589 | Ga0501073_0254909 | Ga0501073_0254909_311_913 | 199 |
| 2 | 3300049584 | Ga0501068_0006245 | Ga0501068_0006245_3176_3826 | 215 |
| 3 | 3300049589 | Ga0501073_0077096 | Ga0501073_0077096_792_1442 | 215 |
| 4 | 3300060353 | Ga0501082_0355010 | Ga0501082_0355010_155_805 | 215 |
| 5 | iso_pu_bacteria | 2884960567 | 2884965369 | 222 |
| 6 | 3300046528 | Ga0495642_0119443 | Ga0495642_0119443_10_711 | 232 |
| 7 | 3300047320 | Ga0495672_0003470 | Ga0495672_0003470_8968_9720 | 241 |
| 8 | 3300049822 | Ga0501035_0355788 | Ga0501035_0355788_463_1191 | 242 |
| 9 | iso_pu_bacteria | 2643221552 | 2643781095 | 245 |
| 10 | 3300005578 | Ga0068854_100040757 | Ga0068854_1000407574 | 249 |
| 11 | 3300025981 | Ga0207640_10140426 | Ga0207640_101404262 | 249 |
| 12 | 3300009098 | Ga0105245_10530789 | Ga0105245_105307892 | 251 |
| 13 | 3300025927 | Ga0207687_10102127 | Ga0207687_101021273 | 251 |
| 14 | iso_pu_bacteria | 2643221598 | 2644001262 | 251 |
| 15 | 3300044901 | Ga0466960_0177119 | Ga0466960_0177119_44_844 | 252 |
| 16 | 3300046520 | Ga0495637_0010513 | Ga0495637_0010513_2411_3172 | 252 |
| 17 | iso_pu_bacteria | 2643221614 | 2644086019 | 252 |
| 18 | iso_pu_bacteria | 2643221661 | 2644345314 | 252 |
| 19 | iso_pu_bacteria | 2643221666 | 2644369588 | 252 |
| 20 | iso_pu_bacteria | 2895880812 | 2895883249 | 252 |
| 21 | 3300003215 | JGI25153J46596_10051511 | JGI25153J46596_100515112 | 253 |
| 22 | 3300003322 | rootL2_10092184 | rootL2_100921841 | 253 |
| 23 | 3300006195 | Ga0075366_10005354 | Ga0075366_100053544 | 253 |
| 24 | 3300025298 | Ga0209050_1008470 | Ga0209050_10084702 | 253 |
| 25 | 3300046507 | Ga0495606_0003150 | Ga0495606_0003150_6889_7665 | 253 |
| 26 | 3300046512 | Ga0495610_0001591 | Ga0495610_0001591_15171_15953 | 253 |
| 27 | 3300053156 | Ga0500622_0036537 | Ga0500622_0036537_1123_1902 | 253 |
| 28 | 3300053136 | Ga0500559_0000112 | Ga0500559_0000112_21489_22277 | 254 |
| 29 | 3300032005 | Ga0307411_10341147 | Ga0307411_103411472 | 255 |
| 30 | 3300049571 | Ga0501034_0304116 | Ga0501034_0304116_333_1103 | 255 |
| 31 | 3300025917 | Ga0207660_10553386 | Ga0207660_105533861 | 256 |
| 32 | 3300037312 | Ga0395899_0230352 | Ga0395899_0230352_463_1236 | 256 |
| 33 | 3300039438 | Ga0436360_0602809 | Ga0436360_0602809_117_890 | 256 |
| 34 | 3300044842 | Ga0466957_0178063 | Ga0466957_0178063_553_1326 | 256 |
| 35 | 3300049568 | Ga0501031_0391659 | Ga0501031_0391659_52_822 | 256 |
| 36 | 3300013100 | Ga0157373_10000718 | Ga0157373_1000071815 | 257 |
| 37 | 3300013100 | Ga0157373_10001287 | Ga0157373_100012878 | 257 |
| 38 | 3300021361 | Ga0213872_10031870 | Ga0213872_100318701 | 257 |
| 39 | 3300025944 | Ga0207661_10369958 | Ga0207661_103699581 | 257 |
| 40 | 3300039447 | Ga0436361_0097453 | Ga0436361_0097453_4687_5463 | 257 |
| 41 | 3300049823 | Ga0501044_0031389 | Ga0501044_0031389_576_1349 | 257 |
| 42 | 3300005327 | Ga0070658_10664200 | Ga0070658_106642001 | 258 |
| 43 | 3300005336 | Ga0070680_100004537 | Ga0070680_1000045374 | 258 |
| 44 | 3300005366 | Ga0070659_100002244 | Ga0070659_10000224412 | 258 |
| 45 | 3300005366 | Ga0070659_100006024 | Ga0070659_1000060245 | 258 |
| 46 | 3300005530 | Ga0070679_100018212 | Ga0070679_1000182124 | 258 |
| 47 | 3300005539 | Ga0068853_100079029 | Ga0068853_1000790291 | 258 |
| 48 | 3300005539 | Ga0068853_100187313 | Ga0068853_1001873131 | 258 |
| 49 | 3300005548 | Ga0070665_100778429 | Ga0070665_1007784291 | 258 |
| 50 | 3300005563 | Ga0068855_100080595 | Ga0068855_1000805952 | 258 |
| 51 | 3300005564 | Ga0070664_100019987 | Ga0070664_1000199874 | 258 |
| 52 | 3300025909 | Ga0207705_10000667 | Ga0207705_100006679 | 258 |
| 53 | 3300025912 | Ga0207707_10061427 | Ga0207707_100614273 | 258 |
| 54 | 3300025917 | Ga0207660_10021189 | Ga0207660_100211893 | 258 |
| 55 | 3300025919 | Ga0207657_10001265 | Ga0207657_100012657 | 258 |
| 56 | 3300025920 | Ga0207649_10248624 | Ga0207649_102486242 | 258 |
| 57 | 3300025921 | Ga0207652_10003685 | Ga0207652_100036859 | 258 |
| 58 | 3300025932 | Ga0207690_10000112 | Ga0207690_1000011217 | 258 |
| 59 | 3300025932 | Ga0207690_10012165 | Ga0207690_100121653 | 258 |
| 60 | 3300025945 | Ga0207679_10034220 | Ga0207679_100342203 | 258 |
| 61 | 3300025949 | Ga0207667_10063980 | Ga0207667_100639802 | 258 |
| 62 | 3300026041 | Ga0207639_10197569 | Ga0207639_101975693 | 258 |
| 63 | 3300026041 | Ga0207639_10763416 | Ga0207639_107634161 | 258 |
| 64 | 3300005366 | Ga0070659_100003275 | Ga0070659_1000032759 | 259 |
| 65 | 3300005539 | Ga0068853_100060302 | Ga0068853_1000603022 | 259 |
| 66 | 3300025941 | Ga0207711_10168203 | Ga0207711_101682032 | 259 |
| 67 | 3300026041 | Ga0207639_10050596 | Ga0207639_100505962 | 259 |
| 68 | 3300031548 | Ga0307408_100605968 | Ga0307408_1006059681 | 259 |
| 69 | 3300048918 | Ga0496115_0024756 | Ga0496115_0024756_3228_4028 | 259 |
| 70 | 3300053096 | Ga0500641_0027914 | Ga0500641_0027914_382_1164 | 259 |
| 71 | 3300005331 | Ga0070670_100082136 | Ga0070670_1000821363 | 260 |
| 72 | 3300005355 | Ga0070671_100035689 | Ga0070671_1000356893 | 260 |
| 73 | 3300005355 | Ga0070671_100052298 | Ga0070671_1000522983 | 260 |
| 74 | 3300005364 | Ga0070673_100311679 | Ga0070673_1003116792 | 260 |
| 75 | 3300005457 | Ga0070662_100071660 | Ga0070662_1000716603 | 260 |
| 76 | 3300005458 | Ga0070681_10009125 | Ga0070681_100091253 | 260 |
| 77 | 3300005548 | Ga0070665_100001035 | Ga0070665_10000103521 | 260 |
| 78 | 3300005548 | Ga0070665_100014956 | Ga0070665_1000149563 | 260 |
| 79 | 3300005616 | Ga0068852_100148360 | Ga0068852_1001483602 | 260 |
| 80 | 3300005618 | Ga0068864_100011765 | Ga0068864_1000117657 | 260 |
| 81 | 3300006881 | Ga0068865_100001958 | Ga0068865_1000019586 | 260 |
| 82 | 3300009093 | Ga0105240_10004233 | Ga0105240_1000423322 | 260 |
| 83 | 3300009093 | Ga0105240_10021375 | Ga0105240_100213756 | 260 |
| 84 | 3300009093 | Ga0105240_10078899 | Ga0105240_100788993 | 260 |
| 85 | 3300009093 | Ga0105240_10109305 | Ga0105240_101093051 | 260 |
| 86 | 3300009093 | Ga0105240_10149256 | Ga0105240_101492563 | 260 |
| 87 | 3300009177 | Ga0105248_10143641 | Ga0105248_101436412 | 260 |
| 88 | 3300009551 | Ga0105238_10020569 | Ga0105238_100205692 | 260 |
| 89 | 3300009551 | Ga0105238_10089287 | Ga0105238_100892872 | 260 |
| 90 | 3300009553 | Ga0105249_10663734 | Ga0105249_106637342 | 260 |
| 91 | 3300010375 | Ga0105239_10444743 | Ga0105239_104447432 | 260 |
| 92 | 3300013306 | Ga0163162_10186743 | Ga0163162_101867432 | 260 |
| 93 | 3300013308 | Ga0157375_10008150 | Ga0157375_100081508 | 260 |
| 94 | 3300014325 | Ga0163163_10059748 | Ga0163163_100597483 | 260 |
| 95 | 3300014325 | Ga0163163_10231556 | Ga0163163_102315561 | 260 |
| 96 | 3300025250 | Ga0209026_1006855 | Ga0209026_10068552 | 260 |
| 97 | 3300025903 | Ga0207680_10082996 | Ga0207680_100829962 | 260 |
| 98 | 3300025913 | Ga0207695_10001217 | Ga0207695_1000121729 | 260 |
| 99 | 3300025913 | Ga0207695_10002434 | Ga0207695_1000243424 | 260 |
| 100 | 3300025913 | Ga0207695_10109164 | Ga0207695_101091643 | 260 |
| 101 | 3300025921 | Ga0207652_10009985 | Ga0207652_100099856 | 260 |
| 102 | 3300025924 | Ga0207694_10105490 | Ga0207694_101054903 | 260 |
| 103 | 3300025925 | Ga0207650_10645337 | Ga0207650_106453371 | 260 |
| 104 | 3300025931 | Ga0207644_10008608 | Ga0207644_100086087 | 260 |
| 105 | 3300025931 | Ga0207644_10408791 | Ga0207644_104087912 | 260 |
| 106 | 3300025933 | Ga0207706_10106085 | Ga0207706_101060853 | 260 |
| 107 | 3300025938 | Ga0207704_10009459 | Ga0207704_100094596 | 260 |
| 108 | 3300025938 | Ga0207704_10320189 | Ga0207704_103201892 | 260 |
| 109 | 3300025941 | Ga0207711_10168626 | Ga0207711_101686263 | 260 |
| 110 | 3300025949 | Ga0207667_10050238 | Ga0207667_100502385 | 260 |
| 111 | 3300025949 | Ga0207667_10154825 | Ga0207667_101548252 | 260 |
| 112 | 3300026095 | Ga0207676_10031152 | Ga0207676_100311522 | 260 |
| 113 | 3300026121 | Ga0207683_10055542 | Ga0207683_100555423 | 260 |
| 114 | 3300028379 | Ga0268266_10000311 | Ga0268266_1000031141 | 260 |
| 115 | 3300028379 | Ga0268266_10031217 | Ga0268266_100312173 | 260 |
| 116 | 3300028786 | Ga0307517_10001709 | Ga0307517_1000170925 | 260 |
| 117 | 3300028786 | Ga0307517_10263635 | Ga0307517_102636351 | 260 |
| 118 | 3300031456 | Ga0307513_10003901 | Ga0307513_100039016 | 260 |
| 119 | 3300031456 | Ga0307513_10048320 | Ga0307513_100483205 | 260 |
| 120 | 3300031824 | Ga0307413_10032715 | Ga0307413_100327154 | 260 |
| 121 | 3300033180 | Ga0307510_10036307 | Ga0307510_100363073 | 260 |
| 122 | 3300035113 | Ga0373936_0004034 | Ga0373936_0004034_1099_1884 | 260 |
| 123 | 3300035695 | Ga0373927_0000156 | Ga0373927_0000156_6973_7758 | 260 |
| 124 | 3300037068 | Ga0373925_0000023 | Ga0373925_0000023_105057_105842 | 260 |
| 125 | 3300037068 | Ga0373925_0202355 | Ga0373925_0202355_599_1384 | 260 |
| 126 | 3300037471 | Ga0395905_0053823 | Ga0395905_0053823_557_1342 | 260 |
| 127 | 3300044735 | Ga0466968_0057422 | Ga0466968_0057422_156_941 | 260 |
| 128 | 3300044765 | Ga0466970_0136507 | Ga0466970_0136507_324_1109 | 260 |
| 129 | 3300046515 | Ga0495620_0119622 | Ga0495620_0119622_111_896 | 260 |
| 130 | 3300046528 | Ga0495642_0012163 | Ga0495642_0012163_903_1688 | 260 |
| 131 | 3300046616 | Ga0495668_0179278 | Ga0495668_0179278_229_1014 | 260 |
| 132 | 3300046648 | Ga0495611_0013733 | Ga0495611_0013733_643_1428 | 260 |
| 133 | 3300046684 | Ga0495669_0000042 | Ga0495669_0000042_47443_48228 | 260 |
| 134 | 3300046684 | Ga0495669_0103674 | Ga0495669_0103674_157_942 | 260 |
| 135 | 3300047318 | Ga0495636_0154939 | Ga0495636_0154939_154_939 | 260 |
| 136 | 3300047320 | Ga0495672_0166299 | Ga0495672_0166299_195_980 | 260 |
| 137 | 3300047472 | Ga0495686_0339787 | Ga0495686_0339787_17_802 | 260 |
| 138 | 3300048903 | Ga0496100_0105398 | Ga0496100_0105398_934_1731 | 260 |
| 139 | 3300048904 | Ga0496101_0229678 | Ga0496101_0229678_288_1073 | 260 |
| 140 | 3300048906 | Ga0496103_0155610 | Ga0496103_0155610_24_824 | 260 |
| 141 | 3300048907 | Ga0496104_0126067 | Ga0496104_0126067_1435_2235 | 260 |
| 142 | 3300048910 | Ga0496107_0062370 | Ga0496107_0062370_1167_1967 | 260 |
| 143 | 3300048911 | Ga0496108_0049801 | Ga0496108_0049801_655_1455 | 260 |
| 144 | 3300048912 | Ga0496109_0062507 | Ga0496109_0062507_1823_2623 | 260 |
| 145 | 3300048915 | Ga0496112_0101655 | Ga0496112_0101655_1336_2136 | 260 |
| 146 | 3300048916 | Ga0496113_0072718 | Ga0496113_0072718_49_849 | 260 |
| 147 | 3300048918 | Ga0496115_0001449 | Ga0496115_0001449_12810_13610 | 260 |
| 148 | 3300048918 | Ga0496115_0001572 | Ga0496115_0001572_13884_14669 | 260 |
| 149 | 3300049581 | Ga0501047_0002834 | Ga0501047_0002834_4827_5624 | 260 |
| 150 | 3300053119 | Ga0500595_003899 | Ga0500595_003899_2684_3469 | 260 |
| 151 | 3300053122 | Ga0500608_045590 | Ga0500608_045590_189_974 | 260 |
| 152 | 3300028800 | Ga0265338_10201376 | Ga0265338_102013763 | 261 |
| 153 | 3300049570 | Ga0501033_0134657 | Ga0501033_0134657_414_1202 | 261 |
| 154 | 3300049573 | Ga0501037_0168158 | Ga0501037_0168158_461_1249 | 261 |
| 155 | 3300049581 | Ga0501047_0019040 | Ga0501047_0019040_5768_6556 | 261 |
| 156 | 3300049823 | Ga0501044_0128011 | Ga0501044_0128011_373_1161 | 261 |
| 157 | 3300028800 | Ga0265338_10002312 | Ga0265338_100023129 | 262 |
| 158 | 3300005618 | Ga0068864_100037338 | Ga0068864_1000373384 | 263 |
| 159 | 3300005842 | Ga0068858_100117668 | Ga0068858_1001176683 | 263 |
| 160 | 3300026035 | Ga0207703_10095428 | Ga0207703_100954282 | 263 |
| 161 | 3300026095 | Ga0207676_10021752 | Ga0207676_100217525 | 263 |
| 162 | 3300026118 | Ga0207675_100764609 | Ga0207675_1007646091 | 264 |
| 163 | 3300037471 | Ga0395905_0466103 | Ga0395905_0466103_280_1080 | 264 |
| 164 | 3300046539 | Ga0495621_0098208 | Ga0495621_0098208_105_905 | 264 |
| 165 | 3300046616 | Ga0495668_0120951 | Ga0495668_0120951_429_1232 | 264 |
| 166 | 3300050496 | nmdc:mga07m45_107739_c1 | nmdc:mga07m45_107739_c1_306_1109 | 264 |
| 167 | 3300003215 | JGI25153J46596_10039801 | JGI25153J46596_100398011 | 265 |
| 168 | 3300003791 | Ga0055530_10002158 | Ga0055530_1000215812 | 265 |
| 169 | 3300003794 | Ga0055531_10005437 | Ga0055531_100054373 | 265 |
| 170 | 3300003794 | Ga0055531_10023329 | Ga0055531_100233293 | 265 |
| 171 | 3300005262 | Ga0065165_1000567 | Ga0065165_100056730 | 265 |
| 172 | 3300005262 | Ga0065165_1009443 | Ga0065165_10094433 | 265 |
| 173 | 3300025250 | Ga0209026_1004423 | Ga0209026_10044233 | 265 |
| 174 | 3300025297 | Ga0209758_1003931 | Ga0209758_10039319 | 265 |
| 175 | 3300025298 | Ga0209050_1000161 | Ga0209050_100016127 | 265 |
| 176 | 3300025304 | Ga0209257_1000252 | Ga0209257_1000252121 | 265 |
| 177 | 3300025304 | Ga0209257_1000552 | Ga0209257_100055249 | 265 |
| 178 | 3300025304 | Ga0209257_1001428 | Ga0209257_100142823 | 265 |
| 179 | 3300031824 | Ga0307413_10220559 | Ga0307413_102205592 | 265 |
| 180 | 3300037471 | Ga0395905_0298953 | Ga0395905_0298953_416_1228 | 265 |
| 181 | 3300047472 | Ga0495686_0045763 | Ga0495686_0045763_1307_2110 | 265 |
| 182 | 3300053730 | Ga0500645_002260 | Ga0500645_002260_5725_6537 | 265 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3qsj-assembly1.cif.gz_A | crystal structure of nudix hydrolase from alicyclobacillus acidocaldarius | 0.8735 | 8 | 218 |
| 4dyw-assembly1.cif.gz_A | crystal structure of mutt nudix hydrolase from burkholderia pseudomallei | 0.8347 | 8 | 205 |
| 3qsj-assembly1.cif.gz_A | crystal structure of nudix hydrolase from alicyclobacillus acidocaldarius | 0.8292 | 8 | 218 |
| 6m72-assembly1.cif.gz_A | crystal structure of mycobacterium smegmatis mutt1 in complex with 8-oxo-dgdp | 0.8202 | 9 | 209 |
| 5gg7-assembly1.cif.gz_A | crystal structure of mycobacterium smegmatis mutt1 in complex with 8-oxo-dgtp, 8-oxo-dgmp and pyrophosphate (i) | 0.8157 | 9 | 209 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q9VIV6_5_270_3.90.79.10 | Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase | 0.8812 | 9 | 227 | 3.90.79.10 |
| af_O53287_11_257_3.90.79.10 | Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase | 0.8753 | 7 | 230 | 3.90.79.10 |
| af_Q6AYD9_3_267_3.90.79.10 | Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase | 0.8633 | 7 | 220 | 3.90.79.10 |
| af_Q9M2J2_5_150_2.60.210.10 | Mainly Beta;Sandwich;Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A;Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.8477 | 228 | 243 | 2.60.210.10 |
| af_Q9VIV9_5_274_3.90.79.10 | Alpha Beta;Alpha-Beta Complex;Nucleoside Triphosphate Pyrophosphohydrolase;Nucleoside Triphosphate Pyrophosphohydrolase | 0.8455 | 7 | 221 | 3.90.79.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1B3NB84-F1-model_v4 | NUDIX domain protein | 0.9869 | 1 | 259 |
GO:0016818
GO:0046872 |
| AF-A0A4Q3SJN0-F1-model_v4 | NUDIX hydrolase | 0.9786 | 112 | 259 |
GO:0016818
GO:0046872 |
| AF-A0A0Q7W705-F1-model_v4 | NUDIX hydrolase | 0.9784 | 9 | 257 |
GO:0016818
GO:0046872 |
| AF-A0A2E8LUP9-F1-model_v4 | deleted | 0.9767 | 97 | 255 |
|
| AF-A0A1B3NB84-F1-model_v4 | NUDIX domain protein | 0.9611 | 1 | 259 |
GO:0016818
GO:0046872 |
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar