F279249

General Info

Members Datasets Scaffolds Average Seq Length
182 141 364 126

Family's Representative Sequence

Representative Sequence 3300025927|Ga0207687_10000013|Ga0207687_10000013284
Length 147
Sequence MPLATKARTSGNSPAAPLSSARMTAQRQRLGRAAEDLVAARLARAGWEIVERNARTRYGELDVVALDGETLVFIEVKAGRENAAFGPERPVLAVDRRKQQRIRRLATAWMAENRNGLRYDEIRFDAVGVTFTRAGRVTGVEHIEGAF

Samples

Sample ID Description Type Environment
1 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
3 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
22 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
33 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
70 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
71 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
72 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
75 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
76 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
77 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
78 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
79 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
80 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
83 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
84 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
85 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
86 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
87 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
88 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
89 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
90 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
91 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
92 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
93 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
94 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
95 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
96 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
97 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
98 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
99 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
100 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
101 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
102 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
103 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
104 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
105 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
106 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
109 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
110 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
111 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
112 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
115 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
116 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
117 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
118 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
119 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
120 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
121 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
122 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
128 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
129 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
130 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
131 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
136 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
137 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
138 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
139 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
140 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
141 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.55
Nodule 0
Rhizoplane 9.34
Rhizosphere 89.56
Stem 0
Stem Tuber 0
Unclassified 3.3

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207687_10000013 3300025927 Bacteria 299826
2 JGI24748J21848_1001747 3300002074 Bacteria 2413
3 JGI24742J22300_10003165 3300002244 Bacteria 2661
4 Ga0070683_100013302 3300005329 Bacteria 7174
5 Ga0070683_100914427 3300005329 Bacteria 842
6 Ga0070677_10000010 3300005333 Bacteria 64402
7 Ga0068869_100390784 3300005334 Bacteria 1142
8 Ga0070666_10062549 3300005335 Bacteria 2522
9 Ga0070682_100000017 3300005337 Bacteria 235228
10 Ga0068868_100000082 3300005338 Bacteria 57070
11 Ga0070661_100206612 3300005344 Bacteria 1502
12 Ga0070668_100032741 3300005347 Bacteria 3956
13 Ga0070671_100017931 3300005355 Bacteria 5743
14 Ga0070667_100015710 3300005367 Bacteria 6260
15 Ga0070711_100222783 3300005439 Bacteria 1467
16 Ga0070700_100203859 3300005441 Bacteria 1391
17 Ga0070663_100068519 3300005455 Bacteria 2576
18 Ga0070663_100869087 3300005455 Unclassified 777
19 Ga0070681_10089489 3300005458 Bacteria 3030
20 Ga0070685_10932877 3300005466 Bacteria 648
21 Ga0070679_100000244 3300005530 Bacteria 45433
22 Ga0070665_100000040 3300005548 Bacteria 305480
23 Ga0070665_100006619 3300005548 Bacteria 11774
24 Ga0070664_100133670 3300005564 Bacteria 2180
25 Ga0068854_100007581 3300005578 Bacteria 6939
26 Ga0068856_100026306 3300005614 Bacteria 5674
27 Ga0068856_102059627 3300005614 Bacteria 581
28 Ga0068864_100000031 3300005618 Bacteria 215331
29 Ga0068861_100188349 3300005719 Bacteria 1723
30 Ga0068858_100000353 3300005842 Bacteria 48412
31 Ga0068858_100001211 3300005842 Bacteria 26757
32 Ga0068858_100074987 3300005842 Bacteria 3142
33 Ga0068860_100112684 3300005843 Bacteria 2601
34 Ga0068862_100000891 3300005844 Bacteria 28985
35 Ga0075433_10004899 3300006852 Bacteria 10477
36 Ga0105251_10625726 3300009011 Bacteria 513
37 Ga0105240_10739709 3300009093 Unclassified 1070
38 Ga0105245_10000444 3300009098 Bacteria 37905
39 Ga0105247_10137089 3300009101 Bacteria 1600
40 Ga0105247_10198108 3300009101 Bacteria 1348
41 Ga0105247_10343211 3300009101 Bacteria 1048
42 Ga0105242_11844251 3300009176 Bacteria 644
43 Ga0105249_10000050 3300009553 Bacteria 169617
44 Ga0105249_10020259 3300009553 Bacteria 5944
45 Ga0105246_10060961 3300011119 Bacteria 2623
46 Ga0105246_10504959 3300011119 Bacteria 1028
47 Ga0157370_10089622 3300013104 Bacteria 2889
48 Ga0157374_10469412 3300013296 Bacteria 1261
49 Ga0163162_11078092 3300013306 Bacteria 910
50 Ga0157375_10000286 3300013308 Bacteria 46112
51 Ga0163163_10162345 3300014325 Bacteria 2280
52 Ga0163163_11048452 3300014325 Bacteria 879
53 Ga0157379_10019129 3300014968 Bacteria 6047
54 Ga0157379_10032726 3300014968 Bacteria 4637
55 Ga0157379_11673270 3300014968 Unclassified 623
56 Ga0207682_10000013 3300025893 Bacteria 83196
57 Ga0207692_10361693 3300025898 Bacteria 897
58 Ga0207710_10183502 3300025900 Bacteria 1027
59 Ga0207680_10031848 3300025903 Bacteria 2991
60 Ga0207707_10069644 3300025912 Bacteria 3066
61 Ga0207695_10429237 3300025913 Unclassified 1205
62 Ga0207663_10122534 3300025916 Bacteria 1783
63 Ga0207652_10000395 3300025921 Bacteria 45460
64 Ga0207687_10001663 3300025927 Bacteria 15342
65 Ga0207644_10143640 3300025931 Bacteria 1840
66 Ga0207706_10000001 3300025933 Bacteria 423014
67 Ga0207686_10154613 3300025934 Bacteria 1601
68 Ga0207689_10133897 3300025942 Bacteria 2040
69 Ga0207661_10008569 3300025944 Bacteria 7310
70 Ga0207661_10220816 3300025944 Bacteria 1675
71 Ga0207661_10406357 3300025944 Bacteria 1235
72 Ga0207679_10206920 3300025945 Bacteria 1643
73 Ga0207712_10010500 3300025961 Bacteria 5879
74 Ga0207668_10014794 3300025972 Bacteria 4836
75 Ga0207640_10020450 3300025981 Bacteria 3931
76 Ga0207703_10000078 3300026035 Bacteria 115634
77 Ga0207703_10000339 3300026035 Bacteria 50936
78 Ga0207639_10000615 3300026041 Bacteria 24547
79 Ga0207708_10050723 3300026075 Bacteria 3159
80 Ga0207708_10057020 3300026075 Bacteria 2980
81 Ga0207702_10025613 3300026078 Bacteria 4897
82 Ga0207641_10001110 3300026088 Bacteria 27049
83 Ga0207676_10000031 3300026095 Bacteria 215877
84 Ga0207675_100235821 3300026118 Bacteria 1766
85 Ga0268266_10000045 3300028379 Bacteria 312955
86 Ga0268266_10005461 3300028379 Bacteria 11838
87 Ga0268264_10035189 3300028381 Bacteria 4123
88 Ga0265326_10000072 3300028558 Bacteria 57044
89 Ga0265334_10297736 3300028573 Unclassified 552
90 Ga0265322_10000001 3300028654 Bacteria 543854
91 Ga0265322_10097813 3300028654 Bacteria 835
92 Ga0265336_10002887 3300028666 Bacteria 6915
93 Ga0265338_10121084 3300028800 Bacteria 2086
94 Ga0265324_10000317 3300029957 Bacteria 35454
95 Ga0265330_10136776 3300031235 Bacteria 1042
96 Ga0265332_10095562 3300031238 Bacteria 1255
97 Ga0265328_10004120 3300031239 Bacteria 6347
98 Ga0265320_10000002 3300031240 Bacteria 542875
99 Ga0265329_10018545 3300031242 Bacteria 2377
100 Ga0265331_10001057 3300031250 Bacteria 21471
101 Ga0265327_10000011 3300031251 Bacteria 543807
102 Ga0265316_10095856 3300031344 Bacteria 2259
103 Ga0265313_10197814 3300031595 Unclassified 837
104 Ga0265314_10000487 3300031711 Bacteria 51708
105 Ga0373953_0150220 3300035117 Bacteria 999
106 Ga0373957_0038531 3300035120 Bacteria 1790
107 Ga0373937_0118025 3300036401 Bacteria 2471
108 Ga0451802_1466345 3300041460 Bacteria 525
109 Ga0466960_0780146 3300044901 Bacteria 577
110 Ga0495592_0000510 3300046454 Bacteria 28216
111 Ga0495592_0106250 3300046454 Bacteria 1993
112 Ga0495603_0000288 3300046455 Bacteria 26734
113 Ga0495603_0000389 3300046455 Bacteria 24062
114 Ga0495629_0000431 3300046459 Bacteria 34967
115 Ga0495629_0187283 3300046459 Bacteria 1433
116 Ga0495641_0000050 3300046461 Bacteria 73259
117 Ga0495653_0053044 3300046463 Bacteria 3104
118 Ga0495653_0504283 3300046463 Bacteria 754
119 Ga0495662_0061801 3300046476 Bacteria 1810
120 Ga0495608_0030751 3300046511 Bacteria 3633
121 Ga0495608_0070213 3300046511 Bacteria 2286
122 Ga0495618_0000134 3300046514 Bacteria 53541
123 Ga0495620_0000227 3300046515 Bacteria 42462
124 Ga0495628_0000044 3300046516 Bacteria 99014
125 Ga0495628_0035320 3300046516 Bacteria 4018
126 Ga0495630_0080262 3300046517 Bacteria 2461
127 Ga0495652_0000023 3300046529 Bacteria 168049
128 Ga0495652_0157563 3300046529 Bacteria 1766
129 Ga0495640_0015124 3300046533 Bacteria 5813
130 Ga0495640_0017154 3300046533 Bacteria 5402
131 Ga0495586_0001646 3300046535 Bacteria 12255
132 Ga0495587_0132744 3300046536 Bacteria 1423
133 Ga0495587_0431810 3300046536 Bacteria 730
134 Ga0495667_0112944 3300046559 Bacteria 1755
135 Ga0495634_0000034 3300046642 Bacteria 106338
136 Ga0495634_0100685 3300046642 Bacteria 1867
137 Ga0495635_0000057 3300046663 Bacteria 67714
138 Ga0495647_0000016 3300046681 Bacteria 86316
139 Ga0495647_0001716 3300046681 Bacteria 6791
140 Ga0495647_0166265 3300046681 Bacteria 953
141 Ga0495669_0000167 3300046684 Bacteria 41728
142 Ga0495613_0000083 3300046689 Bacteria 90138
143 Ga0495613_0000973 3300046689 Bacteria 21857
144 Ga0495624_0000024 3300046690 Bacteria 98577
145 Ga0495624_0052388 3300046690 Bacteria 2579
146 Ga0495600_0000556 3300046809 Bacteria 19374
147 Ga0495604_0000071 3300047317 Bacteria 89185
148 Ga0495674_0000019 3300047319 Bacteria 185107
149 Ga0495676_0000127 3300047321 Bacteria 57750
150 Ga0495676_0133688 3300047321 Bacteria 1787
151 Ga0495680_0000266 3300047322 Bacteria 57995
152 Ga0495684_0017056 3300047471 Bacteria 5594
153 Ga0495686_0519063 3300047472 Bacteria 625
154 Ga0495593_0045570 3300047673 Bacteria 2340
155 Ga0495602_0000844 3300048088 Bacteria 29474
156 Ga0495626_0197279 3300048091 Bacteria 827
157 Ga0496100_0000010 3300048903 Bacteria 205204
158 Ga0496101_0000025 3300048904 Bacteria 205204
159 Ga0496103_0073504 3300048906 Bacteria 2142
160 Ga0496104_0000009 3300048907 Bacteria 488055
161 Ga0496105_0000007 3300048908 Bacteria 339658
162 Ga0496105_0000101 3300048908 Bacteria 58062
163 Ga0496106_0000012 3300048909 Bacteria 205158
164 Ga0496107_0000010 3300048910 Bacteria 205188
165 Ga0496108_0000001 3300048911 Bacteria 919044
166 Ga0496109_0000004 3300048912 Bacteria 404818
167 Ga0496109_0650443 3300048912 Bacteria 991
168 Ga0496110_0016599 3300048913 Bacteria 6149
169 Ga0496114_0061045 3300048917 Bacteria 3152
170 Ga0496114_0153860 3300048917 Bacteria 1996
171 Ga0496114_0373248 3300048917 Bacteria 1263
172 Ga0496114_0823682 3300048917 Bacteria 807
173 Ga0496125_0114392 3300048928 Bacteria 1944
174 Ga0501042_0048010 3300049578 Bacteria 3044
175 Ga0501068_0050310 3300049584 Bacteria 2519
176 nmdc:mga0a205_12579_c1 3300050515 Bacteria 7831
177 Ga0495601_0123874 3300053077 Bacteria 1680
178 Ga0495612_0000906 3300053078 Bacteria 12126
179 Ga0495619_0000010 3300053085 Bacteria 302390
180 Ga0495619_0000373 3300053085 Bacteria 30829
181 Ga0500614_001295 3300053123 Bacteria 6038
182 Ga0501082_1662402 3300060353 Bacteria 557
183 Ga0207687_10000013
184 JGI24748J21848_1001747
185 JGI24742J22300_10003165
186 Ga0070683_100013302
187 Ga0070683_100914427
188 Ga0070677_10000010
189 Ga0068869_100390784
190 Ga0070666_10062549
191 Ga0070682_100000017
192 Ga0068868_100000082
193 Ga0070661_100206612
194 Ga0070668_100032741
195 Ga0070671_100017931
196 Ga0070667_100015710
197 Ga0070711_100222783
198 Ga0070700_100203859
199 Ga0070663_100068519
200 Ga0070663_100869087
201 Ga0070681_10089489
202 Ga0070685_10932877
203 Ga0070679_100000244
204 Ga0070665_100000040
205 Ga0070665_100006619
206 Ga0070664_100133670
207 Ga0068854_100007581
208 Ga0068856_100026306
209 Ga0068856_102059627
210 Ga0068864_100000031
211 Ga0068861_100188349
212 Ga0068858_100000353
213 Ga0068858_100001211
214 Ga0068858_100074987
215 Ga0068860_100112684
216 Ga0068862_100000891
217 Ga0075433_10004899
218 Ga0105251_10625726
219 Ga0105240_10739709
220 Ga0105245_10000444
221 Ga0105247_10137089
222 Ga0105247_10198108
223 Ga0105247_10343211
224 Ga0105242_11844251
225 Ga0105249_10000050
226 Ga0105249_10020259
227 Ga0105246_10060961
228 Ga0105246_10504959
229 Ga0157370_10089622
230 Ga0157374_10469412
231 Ga0163162_11078092
232 Ga0157375_10000286
233 Ga0163163_10162345
234 Ga0163163_11048452
235 Ga0157379_10019129
236 Ga0157379_10032726
237 Ga0157379_11673270
238 Ga0207682_10000013
239 Ga0207692_10361693
240 Ga0207710_10183502
241 Ga0207680_10031848
242 Ga0207707_10069644
243 Ga0207695_10429237
244 Ga0207663_10122534
245 Ga0207652_10000395
246 Ga0207687_10001663
247 Ga0207644_10143640
248 Ga0207706_10000001
249 Ga0207686_10154613
250 Ga0207689_10133897
251 Ga0207661_10008569
252 Ga0207661_10220816
253 Ga0207661_10406357
254 Ga0207679_10206920
255 Ga0207712_10010500
256 Ga0207668_10014794
257 Ga0207640_10020450
258 Ga0207703_10000078
259 Ga0207703_10000339
260 Ga0207639_10000615
261 Ga0207708_10050723
262 Ga0207708_10057020
263 Ga0207702_10025613
264 Ga0207641_10001110
265 Ga0207676_10000031
266 Ga0207675_100235821
267 Ga0268266_10000045
268 Ga0268266_10005461
269 Ga0268264_10035189
270 Ga0265326_10000072
271 Ga0265334_10297736
272 Ga0265322_10000001
273 Ga0265322_10097813
274 Ga0265336_10002887
275 Ga0265338_10121084
276 Ga0265324_10000317
277 Ga0265330_10136776
278 Ga0265332_10095562
279 Ga0265328_10004120
280 Ga0265320_10000002
281 Ga0265329_10018545
282 Ga0265331_10001057
283 Ga0265327_10000011
284 Ga0265316_10095856
285 Ga0265313_10197814
286 Ga0265314_10000487
287 Ga0373953_0150220
288 Ga0373957_0038531
289 Ga0373937_0118025
290 Ga0451802_1466345
291 Ga0466960_0780146
292 Ga0495592_0000510
293 Ga0495592_0106250
294 Ga0495603_0000288
295 Ga0495603_0000389
296 Ga0495629_0000431
297 Ga0495629_0187283
298 Ga0495641_0000050
299 Ga0495653_0053044
300 Ga0495653_0504283
301 Ga0495662_0061801
302 Ga0495608_0030751
303 Ga0495608_0070213
304 Ga0495618_0000134
305 Ga0495620_0000227
306 Ga0495628_0000044
307 Ga0495628_0035320
308 Ga0495630_0080262
309 Ga0495652_0000023
310 Ga0495652_0157563
311 Ga0495640_0015124
312 Ga0495640_0017154
313 Ga0495586_0001646
314 Ga0495587_0132744
315 Ga0495587_0431810
316 Ga0495667_0112944
317 Ga0495634_0000034
318 Ga0495634_0100685
319 Ga0495635_0000057
320 Ga0495647_0000016
321 Ga0495647_0001716
322 Ga0495647_0166265
323 Ga0495669_0000167
324 Ga0495613_0000083
325 Ga0495613_0000973
326 Ga0495624_0000024
327 Ga0495624_0052388
328 Ga0495600_0000556
329 Ga0495604_0000071
330 Ga0495674_0000019
331 Ga0495676_0000127
332 Ga0495676_0133688
333 Ga0495680_0000266
334 Ga0495684_0017056
335 Ga0495686_0519063
336 Ga0495593_0045570
337 Ga0495602_0000844
338 Ga0495626_0197279
339 Ga0496100_0000010
340 Ga0496101_0000025
341 Ga0496103_0073504
342 Ga0496104_0000009
343 Ga0496105_0000007
344 Ga0496105_0000101
345 Ga0496106_0000012
346 Ga0496107_0000010
347 Ga0496108_0000001
348 Ga0496109_0000004
349 Ga0496109_0650443
350 Ga0496110_0016599
351 Ga0496114_0061045
352 Ga0496114_0153860
353 Ga0496114_0373248
354 Ga0496114_0823682
355 Ga0496125_0114392
356 Ga0501042_0048010
357 Ga0501068_0050310
358 nmdc:mga0a205_12579_c1
359 Ga0495601_0123874
360 Ga0495612_0000906
361 Ga0495619_0000010
362 Ga0495619_0000373
363 Ga0500614_001295
364 Ga0501082_1662402

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02021

UPF0102

Uncharacterised protein family UPF0102

34

129

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
6j4g-assembly1.cif.gz_B crystal structure of the atwrky33 domain 0.8792 105 121
3fov-assembly1.cif.gz_A crystal structure of protein rpa0323 of unknown function from rhodopseudomonas palustris 0.7666 12 125
1vr9-assembly2.cif.gz_B crystal structure of a cbs domain pair/act domain protein (tm0892) from thermotoga maritima at 1.70 a resolution 0.7625 105 118
3fov-assembly1.cif.gz_A crystal structure of protein rpa0323 of unknown function from rhodopseudomonas palustris 0.726 12 125
1ob8-assembly1.cif.gz_A holliday junction resolving enzyme 0.7073 9 124
ID Description Score Start End Superfamily
5ekqE01 Alpha Beta;2-Layer Sandwich;Beta-lactamase Inhibitory Protein; Chain:B, domain 1; 0.881 103 125 3.30.1450.10
af_A0A0R0JLC3_86_213_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8624 105 122 3.30.420.10
af_P9WFM9_15_126_3.40.1350.10 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.8421 12 123 3.40.1350.10
af_Q9SCX8_41_336_3.60.21.10 Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases 0.8377 103 123 3.60.21.10
af_P9WFM9_15_126_3.40.1350.10 Alpha Beta;3-Layer(aba) Sandwich;Trna Endonuclease; Chain: A, domain 1; 0.8283 12 123 3.40.1350.10
ID Description Score Start End GO Terms
AF-A0A537YQ11-F1-model_v4 UPF0102 protein E6G51_07850 0.9718 1 125 GO:0003676
AF-A0A7V9LFH4-F1-model_v4 UPF0102 protein H0V15_02010 0.9637 1 125 GO:0003676
AF-A0A7V9LFH4-F1-model_v4 UPF0102 protein H0V15_02010 0.9561 1 125 GO:0003676
AF-A0A7V8ZIQ3-F1-model_v4 UPF0102 protein H0V81_08670 0.9294 1 125 GO:0003676
AF-A0A1Q3NIF0-F1-model_v4 deleted 0.924 2 125

Map