F279474

General Info

Members Datasets Scaffolds Average Seq Length
182 152 154 883

Family's Representative Sequence

Representative Sequence 3300037068|Ga0373925_0011680|Ga0373925_0011680_466_3327
Length 953
Sequence MIDVKQRLDLPSGMSRTYCSLPVLEKSGIARISRLPVTVRILLESVLRHVDGLRIRDEDVEALAGWRPDAARTAEVPFVVGRVLLQDFTGVPLLVDLAAMRSAVASRGADLGRVQPRVPVDLVIDHSVQVDHFGRPDALRLNMDMELRRNDARYRFLKWGAQAFDGLRIVPPGFGICHQVNLEFLAGVVLEKDGVIYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVYLLLPDVVGVHLHGRLREGVTATDLVLRITELLRRAGVVGKLVEFHGEGAASLSVPDRATLANMAPEYGATAGFFPIDEQSCRYLRATGRADEHVETVRRYYQAQGLFGMPARDQCDYTSVLDLDLGSVEPSVAGPKRPQDRIALGALKEQFLALLASPDGYGKPADDLRRVVSVRLGDGKAPRPGGGDQSDDGFVERRAANTSALTESEMMNNRPTPNRTGQSGPPAARAATVEIGHGDVVIAAITSCTNTSNPAVMLAAGLLAKKSVELGLGVKPWVKTSLAPGSRVVSEYLTKTGLQPFLDQLGFNLVAFGCTTCIGNSGPLDRALEEALTAQDIVGASVLSGNRNFEARVHQSVKANFLMSPPLVVAFAIAGRIGIDLTREPLATVGGRDVYLRDVWPSMQEVDALAASAFDPAEYRRVYADFARQNPLWNQIPVAAGQLYEWDPASTYIRQPPYFEPSMTEMPSLDITGARALAIFGDSITTDHISPAGAIKPTSAAGTYLQGLGVAVEDFNSYGARRGNHEVMVRGTFANVRIRNLMVPGVEGSVTQHQPGGERMAIYDAAERYRAEGVPLIVIAGRDYGAGSSRDWAAKGTRLLGVRAVVARGFERIHRSNLIDLGVLPCQLPQDAGAQQLGLDGTERFDLTVVGPLRPGVSATLAIERRDGRRASVPLVVRIDTPIEAAYFSAGGILPYVLEQLIGPGQKAGGHASAPPS

Samples

Sample ID Description Type Environment
1 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
2 2512047086 Sinorhizobium arboris LMG 14919 Isolate Nodule
3 2515154107 Sinorhizobium meliloti 4H41 Isolate Nodule
4 2558860983 Allorhizobium undicola ATCC 700741 Isolate Rhizoplane
5 2643221734 Bosea sp. Root670 Isolate Unclassified
6 2738543012 Acidovorax sp. CF301 Isolate Unclassified
7 2808606384 Burkholderia sp. SJZ089 Isolate Rhizosphere
8 2808606390 Burkholderia sp. SJZ115 Isolate Rhizosphere
9 2808606391 Burkholderia sp. SJZ091 Isolate Rhizosphere
10 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
11 2842341865 Rhizobium leguminosarum SEMIA 4011 Isolate Nodule
12 2842363717 Rhizobium leguminosarum SEMIA 4016 Isolate Nodule
13 2842495871 Rhizobium etli SEMIA 4062 Isolate Nodule
14 2857542790 Achromobacter sp. R-72367 Isolate Unclassified
15 2871444079 Mesorhizobium sp. M1A.F.Ca.IN.020.06.1.1 Isolate Nodule
16 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
17 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
18 2913295892 Sinorhizobium kostiensis DSM 13372 Isolate Nodule
19 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
20 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
21 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
22 2957443900 Sinorhizobium meliloti USDA1734 Isolate Nodule
23 2960617483 Sinorhizobium meliloti USDA1719 Isolate Nodule
24 2960660292 Sinorhizobium meliloti USDA1883 Isolate Nodule
25 2977523885 Sinorhizobium meliloti USDA1777 Isolate Nodule
26 2996341866 Mesorhizobium sp. M1A.F.Ca.IN.020.32.1.1 Isolate Nodule
27 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
28 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
29 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
30 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
31 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
32 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
33 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
34 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
35 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
36 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
37 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
38 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
39 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
40 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
41 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
51 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013249 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.3_F06 Metagenome Rhizosphere
61 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
66 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
67 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
68 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
69 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
92 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
93 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
94 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
95 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
96 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
97 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
98 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
106 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
109 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
110 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
111 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
112 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
113 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
114 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
115 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
116 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
117 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
118 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
119 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
123 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
124 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
125 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
126 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
127 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
128 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
129 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
130 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
138 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
139 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
140 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
141 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
142 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
143 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
144 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
145 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
146 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
147 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
148 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
149 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
150 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
151 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
152 8057132660 Paracoccus rhizosphaerae LMG 21293 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.62
Metatranscriptomes 0
Isolates 15.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.69
Nodule 7.14
Rhizoplane 4.4
Rhizosphere 69.78
Stem 0
Stem Tuber 0
Unclassified 10.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25165J46597_1000171 3300003214 Bacteria 102312
2 Ga0055526_1000083 3300003771 Bacteria 86873
3 Ga0065165_1000026 3300005262 Bacteria 233376
4 Ga0070676_10013370 3300005328 Bacteria 4498
5 Ga0070683_100002995 3300005329 Bacteria 13552
6 Ga0070683_100037039 3300005329 Bacteria 4465
7 Ga0070680_100001714 3300005336 Bacteria 16108
8 Ga0070682_100010766 3300005337 Bacteria 5200
9 Ga0070682_100032746 3300005337 Bacteria 3154
10 Ga0070660_100000917 3300005339 Bacteria 19715
11 Ga0070661_100001962 3300005344 Bacteria 14212
12 Ga0070705_100000662 3300005440 Bacteria 19709
13 Ga0070694_100000499 3300005444 Bacteria 21543
14 Ga0070678_100005864 3300005456 Bacteria 7145
15 Ga0070681_10001268 3300005458 Bacteria 22023
16 Ga0070681_10069087 3300005458 Bacteria 3499
17 Ga0068853_100000669 3300005539 Bacteria 23605
18 Ga0070696_100005581 3300005546 Bacteria 8399
19 Ga0070665_100000537 3300005548 Bacteria 53369
20 Ga0070665_100001160 3300005548 Bacteria 32371
21 Ga0068855_100005103 3300005563 Bacteria 16005
22 Ga0068855_100007246 3300005563 Bacteria 13450
23 Ga0068854_100011516 3300005578 Bacteria 5763
24 Ga0068856_100000657 3300005614 Bacteria 37435
25 Ga0068856_100014825 3300005614 Bacteria 7523
26 Ga0068859_100010022 3300005617 Bacteria 9556
27 Ga0068861_100007222 3300005719 Bacteria 7610
28 Ga0075428_100006367 3300006844 Bacteria 13136
29 Ga0075428_100038461 3300006844 Bacteria 5265
30 Ga0075428_100055279 3300006844 Bacteria 4349
31 Ga0075431_100005524 3300006847 Bacteria 12478
32 Ga0075431_100110017 3300006847 Bacteria 2844
33 Ga0075429_100001935 3300006880 Bacteria 17173
34 Ga0097620_100010022 3300006931 Bacteria 9556
35 Ga0105240_10012382 3300009093 Bacteria 11779
36 Ga0105240_10013670 3300009093 Bacteria 11132
37 Ga0111539_10001088 3300009094 Bacteria 35916
38 Ga0111539_10117019 3300009094 Bacteria 3125
39 Ga0105243_10000122 3300009148 Bacteria 89527
40 Ga0105241_10000117 3300009174 Bacteria 57559
41 Ga0105237_10043143 3300009545 Bacteria 4545
42 Ga0105239_10000164 3300010375 Bacteria 95286
43 Ga0157369_10064813 3300013105 Bacteria 3934
44 Ga0171463_1002 3300013249 Bacteria 1274851
45 Ga0171462_1018 3300013250 Bacteria 157875
46 Ga0157378_10025923 3300013297 Bacteria 5166
47 Ga0157372_10077082 3300013307 Bacteria 3764
48 Ga0157379_10003607 3300014968 Bacteria 13131
49 Ga0183363_1127 3300015690 Bacteria 19257
50 Ga0213872_10002018 3300021361 Bacteria 12331
51 Ga0209233_1000042 3300025261 Bacteria 510519
52 Ga0209130_1000150 3300025284 Bacteria 108274
53 Ga0209564_1000019 3300025295 Bacteria 573686
54 Ga0207645_10001314 3300025907 Bacteria 20402
55 Ga0207645_10023929 3300025907 Bacteria 3964
56 Ga0207643_10002525 3300025908 Bacteria 9898
57 Ga0207654_10004298 3300025911 Bacteria 7183
58 Ga0207707_10000251 3300025912 Bacteria 58978
59 Ga0207707_10003882 3300025912 Bacteria 13255
60 Ga0207695_10002727 3300025913 Bacteria 25767
61 Ga0207695_10064358 3300025913 Bacteria 3776
62 Ga0207660_10000752 3300025917 Bacteria 21546
63 Ga0207652_10000359 3300025921 Bacteria 47235
64 Ga0207690_10012325 3300025932 Bacteria 5116
65 Ga0207706_10012776 3300025933 Bacteria 7644
66 Ga0207709_10000083 3300025935 Bacteria 163025
67 Ga0207669_10000332 3300025937 Bacteria 21555
68 Ga0207689_10000204 3300025942 Bacteria 52389
69 Ga0207661_10024261 3300025944 Bacteria 4594
70 Ga0207661_10028788 3300025944 Bacteria 4259
71 Ga0207667_10004018 3300025949 Bacteria 18078
72 Ga0207667_10028403 3300025949 Bacteria 6077
73 Ga0207639_10008256 3300026041 Bacteria 7133
74 Ga0207708_10022344 3300026075 Bacteria 4777
75 Ga0207674_10010970 3300026116 Bacteria 10197
76 Ga0207675_100056704 3300026118 Bacteria 3654
77 Ga0207683_10001196 3300026121 Bacteria 23487
78 Ga0268266_10000074 3300028379 Bacteria 230993
79 Ga0268266_10002173 3300028379 Bacteria 21480
80 Ga0268264_10020093 3300028381 Bacteria 5457
81 Ga0265318_10009981 3300028577 Bacteria 4154
82 Ga0265322_10003190 3300028654 Bacteria 4980
83 Ga0307517_10032596 3300028786 Bacteria 6015
84 Ga0265330_10000690 3300031235 Bacteria 21597
85 Ga0265320_10009987 3300031240 Bacteria 5678
86 Ga0265316_10001883 3300031344 Bacteria 22035
87 Ga0265316_10005217 3300031344 Bacteria 12703
88 Ga0265342_10000602 3300031712 Bacteria 38030
89 Ga0307406_10031636 3300031901 Bacteria 3223
90 Ga0307416_100030350 3300032002 Bacteria 4055
91 Ga0307510_10038303 3300033180 Bacteria 5303
92 Ga0373925_0011680 3300037068 Bacteria 6351
93 Ga0395899_0021187 3300037312 Bacteria 4931
94 Ga0395900_0005768 3300037418 Bacteria 12937
95 Ga0395900_0008497 3300037418 Bacteria 10555
96 Ga0395898_0012859 3300037466 Bacteria 8634
97 Ga0395901_0004298 3300038443 Bacteria 14368
98 Ga0395901_0013564 3300038443 Bacteria 8287
99 Ga0436361_0076578 3300039447 Bacteria 9664
100 Ga0451576_0015759 3300045051 Bacteria 8365
101 Ga0466958_0037270 3300045836 Bacteria 2914
102 Ga0495650_0000091 3300046471 Bacteria 228697
103 Ga0495583_0000693 3300046506 Bacteria 43601
104 Ga0495606_0000306 3300046507 Bacteria 84561
105 Ga0495643_0002326 3300046522 Bacteria 15280
106 Ga0495643_0006837 3300046522 Bacteria 7442
107 Ga0495648_0000147 3300046524 Bacteria 84418
108 Ga0495663_0008220 3300046525 Bacteria 2887
109 Ga0495633_0000821 3300046558 Bacteria 27465
110 Ga0495668_0000072 3300046616 Bacteria 167170
111 Ga0495625_0000274 3300046660 Bacteria 80067
112 Ga0495625_0000884 3300046660 Bacteria 40584
113 Ga0495600_0018170 3300046809 Bacteria 4477
114 Ga0495686_0000089 3300047472 Bacteria 194673
115 Ga0495686_0000281 3300047472 Bacteria 89475
116 Ga0496102_0000847 3300048905 Bacteria 29350
117 Ga0496103_0004821 3300048906 Bacteria 8145
118 Ga0496105_0018410 3300048908 Bacteria 5612
119 Ga0496110_0067921 3300048913 Bacteria 3155
120 Ga0496113_0012622 3300048916 Bacteria 5685
121 Ga0496114_0008233 3300048917 Bacteria 8264
122 Ga0496115_0000009 3300048918 Bacteria 234372
123 Ga0496116_0004023 3300048919 Bacteria 14246
124 Ga0496117_0000815 3300048920 Bacteria 48311
125 Ga0496118_0000077 3300048921 Bacteria 192298
126 Ga0496121_0000072 3300048924 Bacteria 244975
127 Ga0496121_0000432 3300048924 Bacteria 82444
128 Ga0496121_0000587 3300048924 Bacteria 68273
129 Ga0496124_0000007 3300048927 Bacteria 883534
130 Ga0496124_0000050 3300048927 Bacteria 258041
131 Ga0496125_0000114 3300048928 Bacteria 182012
132 Ga0496125_0020748 3300048928 Bacteria 6158
133 Ga0496126_0000113 3300048929 Bacteria 192212
134 Ga0496126_0021868 3300048929 Bacteria 6240
135 Ga0501036_0032204 3300049572 Bacteria 4429
136 Ga0501038_0010281 3300049574 Bacteria 8564
137 Ga0501040_0041329 3300049576 Bacteria 3140
138 Ga0501072_0025985 3300049588 Bacteria 4563
139 Ga0501074_0039772 3300049590 Bacteria 3406
140 Ga0501077_0014570 3300049593 Bacteria 4943
141 Ga0501080_0042023 3300049742 Bacteria 4259
142 Ga0501081_0009590 3300049743 Bacteria 6313
143 nmdc:mga06z11_11661_c1 3300050494 Bacteria 3797
144 nmdc:mga08y16_15302_c1 3300050511 Bacteria 8071
145 nmdc:mga08y16_38507_c1 3300050511 Bacteria 5021
146 Ga0500592_000237 3300053116 Bacteria 9976
147 Ga0500595_000588 3300053119 Bacteria 21678
148 Ga0500559_0008881 3300053136 Bacteria 4376
149 Ga0500568_0015118 3300053139 Bacteria 3461
150 Ga0500622_0001829 3300053156 Bacteria 16117
151 Ga0500622_0001852 3300053156 Bacteria 15996
152 Ga0500627_0000001 3300053158 Bacteria 251552
153 Ga0501082_0017505 3300060353 Bacteria 6175
154 Ga0530510_0002144 3300061734 Bacteria 13547

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049576 Ga0501040_0041329 Ga0501040_0041329_29_2323 684
2 3300046525 Ga0495663_0008220 Ga0495663_0008220_19_2283 750
3 3300049590 Ga0501074_0039772 Ga0501074_0039772_804_3389 781
4 3300048913 Ga0496110_0067921 Ga0496110_0067921_684_3137 788
5 3300005563 Ga0068855_100005103 Ga0068855_10000510320 799
6 3300009093 Ga0105240_10013670 Ga0105240_100136702 799
7 3300013307 Ga0157372_10077082 Ga0157372_100770822 799
8 3300025913 Ga0207695_10064358 Ga0207695_100643582 799
9 3300053139 Ga0500568_0015118 Ga0500568_0015118_950_3451 803
10 iso_pu_bacteria 2871444079 2871448027 811
11 3300049743 Ga0501081_0009590 Ga0501081_0009590_3508_6192 812
12 3300053156 Ga0500622_0001852 Ga0500622_0001852_5713_8271 814
13 3300021361 Ga0213872_10002018 Ga0213872_100020182 821
14 3300039447 Ga0436361_0076578 Ga0436361_0076578_1514_3991 821
15 3300049593 Ga0501077_0014570 Ga0501077_0014570_1877_4600 823
16 3300061734 Ga0530510_0002144 Ga0530510_0002144_8224_10947 823
17 iso_pu_bacteria 2996341866 2996342892 824
18 3300046660 Ga0495625_0000884 Ga0495625_0000884_6693_9260 826
19 3300053158 Ga0500627_0000001 Ga0500627_0000001_47002_49569 826
20 3300048928 Ga0496125_0020748 Ga0496125_0020748_3477_6137 828
21 3300009094 Ga0111539_10001088 Ga0111539_1000108823 829
22 3300050511 nmdc:mga08y16_38507_c1 nmdc:mga08y16_38507_c1_943_3465 829
23 3300037418 Ga0395900_0008497 Ga0395900_0008497_4514_7336 832
24 3300037312 Ga0395899_0021187 Ga0395899_0021187_2270_4897 838
25 3300037418 Ga0395900_0005768 Ga0395900_0005768_7746_10373 838
26 3300037466 Ga0395898_0012859 Ga0395898_0012859_5487_8114 838
27 3300038443 Ga0395901_0004298 Ga0395901_0004298_7135_9762 838
28 3300046660 Ga0495625_0000274 Ga0495625_0000274_18847_21414 838
29 3300013297 Ga0157378_10025923 Ga0157378_100259233 839
30 3300005458 Ga0070681_10001268 Ga0070681_100012686 840
31 3300005614 Ga0068856_100014825 Ga0068856_1000148252 840
32 3300025912 Ga0207707_10003882 Ga0207707_1000388210 840
33 iso_pu_bacteria 2509276021 2509388215 841
34 iso_pu_bacteria 2842341865 2842342876 841
35 iso_pu_bacteria 2842363717 2842369502 841
36 3300009093 Ga0105240_10012382 Ga0105240_100123826 842
37 3300010375 Ga0105239_10000164 Ga0105239_1000016478 842
38 3300025913 Ga0207695_10002727 Ga0207695_1000272712 842
39 3300048924 Ga0496121_0000072 Ga0496121_0000072_112380_114944 842
40 3300048929 Ga0496126_0021868 Ga0496126_0021868_1695_4259 842
41 iso_pu_bacteria 2512047086 2512531444 842
42 iso_pu_bacteria 2842495871 2842501003 842
43 iso_pu_bacteria 2913295892 2913298952 842
44 3300025907 Ga0207645_10023929 Ga0207645_100239292 843
45 3300032002 Ga0307416_100030350 Ga0307416_1000303502 843
46 iso_pu_bacteria 3003930520 3003934298 843
47 3300005328 Ga0070676_10013370 Ga0070676_100133703 845
48 3300005336 Ga0070680_100001714 Ga0070680_10000171413 845
49 3300005337 Ga0070682_100010766 Ga0070682_1000107665 845
50 3300005339 Ga0070660_100000917 Ga0070660_10000091714 845
51 3300005344 Ga0070661_100001962 Ga0070661_1000019622 845
52 3300005440 Ga0070705_100000662 Ga0070705_10000066218 845
53 3300005444 Ga0070694_100000499 Ga0070694_1000004993 845
54 3300005546 Ga0070696_100005581 Ga0070696_1000055814 845
55 3300005563 Ga0068855_100007246 Ga0068855_10000724612 845
56 3300005614 Ga0068856_100000657 Ga0068856_10000065728 845
57 3300005617 Ga0068859_100010022 Ga0068859_1000100222 845
58 3300005719 Ga0068861_100007222 Ga0068861_1000072226 845
59 3300006931 Ga0097620_100010022 Ga0097620_1000100222 845
60 3300009174 Ga0105241_10000117 Ga0105241_1000011716 845
61 3300013105 Ga0157369_10064813 Ga0157369_100648132 845
62 3300013249 Ga0171463_1002 Ga0171463_1002654 845
63 3300015690 Ga0183363_1127 Ga0183363_11279 845
64 3300025907 Ga0207645_10001314 Ga0207645_1000131410 845
65 3300025908 Ga0207643_10002525 Ga0207643_100025253 845
66 3300025911 Ga0207654_10004298 Ga0207654_100042982 845
67 3300025912 Ga0207707_10000251 Ga0207707_100002516 845
68 3300025917 Ga0207660_10000752 Ga0207660_1000075218 845
69 3300025921 Ga0207652_10000359 Ga0207652_1000035943 845
70 3300025932 Ga0207690_10012325 Ga0207690_100123252 845
71 3300025933 Ga0207706_10012776 Ga0207706_100127762 845
72 3300025942 Ga0207689_10000204 Ga0207689_1000020410 845
73 3300025949 Ga0207667_10004018 Ga0207667_1000401811 845
74 3300026041 Ga0207639_10008256 Ga0207639_100082561 845
75 3300026075 Ga0207708_10022344 Ga0207708_100223442 845
76 3300026118 Ga0207675_100056704 Ga0207675_1000567042 845
77 3300028381 Ga0268264_10020093 Ga0268264_100200932 845
78 iso_pu_bacteria 2558860983 2561469397 845
79 iso_pu_bacteria 2957443900 2957445161 845
80 iso_pu_bacteria 2960617483 2960619851 845
81 iso_pu_bacteria 2960660292 2960661812 845
82 iso_pu_bacteria 2977523885 2977525421 845
83 iso_pu_bacteria 8057132660 8057136047 845
84 3300025944 Ga0207661_10028788 Ga0207661_100287882 846
85 3300038443 Ga0395901_0013564 Ga0395901_0013564_1436_4258 846
86 iso_pu_bacteria 2515154107 2515610733 846
87 iso_pu_bacteria 2838074704 2838079862 846
88 3300006844 Ga0075428_100055279 Ga0075428_1000552793 847
89 3300047472 Ga0495686_0000089 Ga0495686_0000089_45194_47740 847
90 3300049572 Ga0501036_0032204 Ga0501036_0032204_1009_3828 847
91 3300049742 Ga0501080_0042023 Ga0501080_0042023_878_3697 847
92 3300060353 Ga0501082_0017505 Ga0501082_0017505_1125_3944 847
93 3300005458 Ga0070681_10069087 Ga0070681_100690871 848
94 3300006847 Ga0075431_100110017 Ga0075431_1001100171 848
95 3300014968 Ga0157379_10003607 Ga0157379_100036073 848
96 3300053116 Ga0500592_000237 Ga0500592_000237_3089_5659 848
97 3300005329 Ga0070683_100002995 Ga0070683_1000029957 849
98 3300005548 Ga0070665_100001160 Ga0070665_10000116036 849
99 3300006844 Ga0075428_100006367 Ga0075428_1000063676 849
100 3300013250 Ga0171462_1018 Ga0171462_101887 849
101 3300028379 Ga0268266_10002173 Ga0268266_1000217312 849
102 3300050511 nmdc:mga08y16_15302_c1 nmdc:mga08y16_15302_c1_2838_5516 849
103 iso_pu_bacteria 2884960567 2884961766 849
104 3300005337 Ga0070682_100032746 Ga0070682_1000327462 850
105 3300005539 Ga0068853_100000669 Ga0068853_1000006693 850
106 3300006844 Ga0075428_100038461 Ga0075428_1000384613 850
107 3300006847 Ga0075431_100005524 Ga0075431_1000055248 850
108 3300006880 Ga0075429_100001935 Ga0075429_10000193513 850
109 3300009094 Ga0111539_10117019 Ga0111539_101170191 850
110 3300025949 Ga0207667_10028403 Ga0207667_100284032 850
111 3300026116 Ga0207674_10010970 Ga0207674_100109705 850
112 3300037068 Ga0373925_0011680 Ga0373925_0011680_466_3327 850
113 3300045051 Ga0451576_0015759 Ga0451576_0015759_5018_7876 850
114 3300048927 Ga0496124_0000007 Ga0496124_0000007_138106_140928 850
115 3300049588 Ga0501072_0025985 Ga0501072_0025985_680_3529 850
116 3300005578 Ga0068854_100011516 Ga0068854_1000115163 851
117 3300009545 Ga0105237_10043143 Ga0105237_100431432 851
118 3300048924 Ga0496121_0000587 Ga0496121_0000587_25950_28514 851
119 3300005548 Ga0070665_100000537 Ga0070665_1000005377 852
120 3300028379 Ga0268266_10000074 Ga0268266_10000074189 852
121 3300028577 Ga0265318_10009981 Ga0265318_100099811 852
122 3300028786 Ga0307517_10032596 Ga0307517_100325963 852
123 3300031240 Ga0265320_10009987 Ga0265320_100099875 852
124 3300031344 Ga0265316_10005217 Ga0265316_100052175 852
125 3300033180 Ga0307510_10038303 Ga0307510_100383032 852
126 3300046471 Ga0495650_0000091 Ga0495650_0000091_117247_119814 852
127 3300046506 Ga0495583_0000693 Ga0495583_0000693_5443_8010 852
128 3300046809 Ga0495600_0018170 Ga0495600_0018170_1524_4091 852
129 3300053119 Ga0500595_000588 Ga0500595_000588_12079_14646 852
130 3300045836 Ga0466958_0037270 Ga0466958_0037270_88_2685 853
131 3300028654 Ga0265322_10003190 Ga0265322_100031902 854
132 3300031235 Ga0265330_10000690 Ga0265330_100006904 854
133 3300031344 Ga0265316_10001883 Ga0265316_100018835 854
134 3300031712 Ga0265342_10000602 Ga0265342_1000060213 854
135 iso_pu_bacteria 2919391150 2919394318 854
136 3300005329 Ga0070683_100037039 Ga0070683_1000370392 855
137 3300005456 Ga0070678_100005864 Ga0070678_1000058642 855
138 3300009148 Ga0105243_10000122 Ga0105243_1000012218 855
139 3300025935 Ga0207709_10000083 Ga0207709_1000008318 855
140 3300025937 Ga0207669_10000332 Ga0207669_1000033214 855
141 3300025944 Ga0207661_10024261 Ga0207661_100242612 855
142 3300026121 Ga0207683_10001196 Ga0207683_1000119614 855
143 3300046507 Ga0495606_0000306 Ga0495606_0000306_13342_15912 855
144 3300046522 Ga0495643_0002326 Ga0495643_0002326_3445_6015 855
145 3300046522 Ga0495643_0006837 Ga0495643_0006837_3267_5837 855
146 3300046558 Ga0495633_0000821 Ga0495633_0000821_3670_6240 855
147 3300046616 Ga0495668_0000072 Ga0495668_0000072_102216_104786 855
148 3300047472 Ga0495686_0000281 Ga0495686_0000281_35494_38064 855
149 3300049574 Ga0501038_0010281 Ga0501038_0010281_5116_7737 855
150 3300053156 Ga0500622_0001829 Ga0500622_0001829_9777_12416 855
151 iso_pu_bacteria 2904770941 2904772445 855
152 iso_pu_bacteria 2643221734 2644734153 856
153 3300046524 Ga0495648_0000147 Ga0495648_0000147_26838_29414 857
154 3300048905 Ga0496102_0000847 Ga0496102_0000847_67_2643 857
155 3300048906 Ga0496103_0004821 Ga0496103_0004821_91_2667 857
156 3300048908 Ga0496105_0018410 Ga0496105_0018410_87_2663 857
157 3300048916 Ga0496113_0012622 Ga0496113_0012622_83_2659 857
158 3300048917 Ga0496114_0008233 Ga0496114_0008233_2288_4864 857
159 3300048918 Ga0496115_0000009 Ga0496115_0000009_69060_71636 857
160 3300048919 Ga0496116_0004023 Ga0496116_0004023_69_2645 857
161 3300048920 Ga0496117_0000815 Ga0496117_0000815_25116_27692 857
162 3300048921 Ga0496118_0000077 Ga0496118_0000077_26703_29279 857
163 3300048924 Ga0496121_0000432 Ga0496121_0000432_10879_13455 857
164 3300048927 Ga0496124_0000050 Ga0496124_0000050_92494_95070 857
165 3300048928 Ga0496125_0000114 Ga0496125_0000114_162608_165184 857
166 3300048929 Ga0496126_0000113 Ga0496126_0000113_26745_29321 857
167 3300053136 Ga0500559_0008881 Ga0500559_0008881_1727_4303 857
168 3300003771 Ga0055526_1000083 Ga0055526_100008342 858
169 3300005262 Ga0065165_1000026 Ga0065165_1000026124 858
170 3300025284 Ga0209130_1000150 Ga0209130_100015034 858
171 3300025295 Ga0209564_1000019 Ga0209564_1000019346 858
172 3300050494 nmdc:mga06z11_11661_c1 nmdc:mga06z11_11661_c1_702_3326 858
173 iso_pu_bacteria 2738543012 2739243541 858
174 iso_pu_bacteria 2857542790 2857543828 858
175 iso_pu_bacteria 2945920336 2945923308 858
176 iso_pu_bacteria 2946037020 2946040975 858
177 3300003214 JGI25165J46597_1000171 JGI25165J46597_100017124 859
178 3300025261 Ga0209233_1000042 Ga0209233_1000042396 859
179 3300031901 Ga0307406_10031636 Ga0307406_100316362 859
180 iso_pu_bacteria 2808606384 2808970847 859
181 iso_pu_bacteria 2808606390 2809005678 859
182 iso_pu_bacteria 2808606391 2809012565 859

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00694

Aconitase_C

Aconitase C-terminal domain

737

867

0.98

PF00330

Aconitase

Aconitase family (aconitate hydratase)

58

611

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2b3y-assembly2.cif.gz_B structure of a monoclinic crystal form of human cytosolic aconitase (irp1) 0.9464 16 853
2b3y-assembly2.cif.gz_B structure of a monoclinic crystal form of human cytosolic aconitase (irp1) 0.9228 16 853
1b0m-assembly1.cif.gz_A aconitase r644q:fluorocitrate complex 0.8816 20 853
1nit-assembly1.cif.gz_A crystal structure of aconitase with trans-aconitate and nitrocitrate bound 0.8775 61 851
1c96-assembly1.cif.gz_A s642a:citrate complex of aconitase 0.8683 20 858
ID Description Score Start End Superfamily
2b3yB02 Alpha Beta;3-Layer(aba) Sandwich;Aconitase; Domain 2;Aconitase, Domain 2 0.9558 234 357 3.40.1060.10
af_Q811J3_205_443_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9445 124 357 3.30.499.10
af_Q2FYS9_374_598_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9306 359 555 3.30.499.10
af_A0A0N7KLZ5_21_389_3.30.499.10 Alpha Beta;2-Layer Sandwich;Aconitase; domain 3;Aconitase, domain 3 0.9281 1 357 3.30.499.10
af_O53166_698_941_3.20.19.10 Alpha Beta;Alpha-Beta Barrel;Aconitase; domain 4;Aconitase, domain 4 0.9247 615 853 3.20.19.10
ID Description Score Start End GO Terms
AF-A0A249P0T6-F1-model_v4 Aconitate hydratase 0.9896 248 371 GO:0046872
GO:0051536
AF-A0A6G3V8N7-F1-model_v4 deleted 0.9865 205 371
AF-A0A2Z3G5A7-F1-model_v4 deleted 0.9864 756 856
AF-A3RTP7-F1-model_v4 deleted 0.9846 1 856
AF-A0A6A5LAH9-F1-model_v4 deleted 0.9841 17 859

Feature Viewer

pLDDT pTM Quality
92.04 0.92 High
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Predicted Structure (AlphaFold2)

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