F279754

General Info

Members Datasets Scaffolds Average Seq Length
182 125 365 566

Family's Representative Sequence

Representative Sequence 3300047472|Ga0495686_0000455|Ga0495686_0000455_51739_53583
Length 606
Sequence MSLSRLIAAFVRRQWRAYAGAALMLACVAALTVWVPRKIGAMIDGLAAHRLGGQALWLELASLVAIGATIYFLRVGWRQTLYAAAYQLGVDLRTRFYERLTVQGPAFFGQQRTGDLMALATNDIDAIEMAAGEALLAGFDGSLTLLMVLAIMVLGVDWRLALVALLPFPLMALAFWRVSRQVHIASVDSLRRFGALNDHVQESLAGVRTVRALGLEQRNGAQFSTLAGRAADASLAAQRWEAAYEPAVGLTLTAASALTLGLGGYLIWQGQLTIGALTSFSMYLGQLIWPMFAAGWVLSLIERGRAALARLQPMLDAPLTIADDGPVTQTPAGTLLIEHLDYAYPSRGAENRPDTHAGQDAGRILDQNVDKSAGRRTAQRPALAAISIALRPGQTLGLAGPTGSGKSTLLRLLLRQLTPSSGSIAWGGHALSDYTLGTLRAAISWVPQESFLFSASIADNIALGRPGATRQEIEHAATLAAIHEDILLFPDGYATAVGERGITLSGGQRQRVAIARALLADSALAVDTGTETRILAHLEALRRSRPGRSAIIASHRLSAVAGADLIVVLHEGRISETGSHETLLAADGWYASQWRYQQLEASLDAL

Samples

Sample ID Description Type Environment
1 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
5 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
6 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
7 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
17 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300012497 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510 Metagenome Rhizosphere
20 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
21 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
22 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
23 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
24 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
26 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
31 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
32 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
33 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
34 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
35 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
36 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
37 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
38 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
39 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
40 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
41 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
42 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
43 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
44 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
45 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
46 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
47 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
48 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
49 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
52 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
53 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
54 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
55 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
56 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
57 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
58 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
59 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
60 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
61 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
62 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
63 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
64 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
65 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
66 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
67 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
68 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
69 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
70 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
71 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
72 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
73 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
74 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
75 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
76 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
77 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
78 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
79 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
80 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
81 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
82 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
83 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
84 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
85 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
86 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
87 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
88 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
89 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
90 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
91 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
92 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
93 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
94 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
95 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
96 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
97 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
98 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
99 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
100 2643221585 Pelomonas sp. Root662 Isolate Unclassified
101 2643221645 Massilia sp. Root351 Isolate Unclassified
102 2643221646 Pelomonas sp. Root1237 Isolate Unclassified
103 2643221656 Pelomonas sp. Root405 Isolate Unclassified
104 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
105 2671180694 Paenibacillus sp. A3 Isolate Unclassified
106 2738541337 Pelomonas sp. BT06 Isolate Unclassified
107 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
108 2818991459 Paenibacillus sp. 597 Isolate Unclassified
109 2831864461 Roseateles noduli HZ7 Isolate Nodule
110 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
111 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
112 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
113 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
114 2904755435 Paenibacillus aceris KACC 19194 Isolate Rhizosphere
115 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
116 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
117 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
118 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
119 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
120 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
121 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
122 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
123 2998344455 Vogesella urethralis SLBN-145 Isolate Rhizosphere
124 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
125 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 83.52
Metatranscriptomes 0
Isolates 16.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.09
Nodule 2.2
Rhizoplane 2.2
Rhizosphere 70.33
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495686_0000455 3300047472 Bacteria 61537
2 rootL2_10001240 3300003322 Bacteria 49675
3 rootL2_10003501 3300003322 Bacteria 8086
4 rootL2_10120187 3300003322 Bacteria 2613
5 rootH1_10011063 3300003323 Bacteria 4935
6 rootH1_10011082 3300003316 Bacteria 8546
7 rootH1_10011082 3300003323 Bacteria 4834
8 rootH1_10016755 3300003323 Bacteria 6098
9 Ga0055526_1009992 3300003771 Bacteria 4479
10 Ga0055524_1001208 3300003775 Bacteria 15319
11 Ga0055531_10000001 3300003794 Bacteria 543586
12 Ga0055531_10000732 3300003794 Bacteria 27747
13 Ga0055531_10008341 3300003794 Bacteria 5487
14 Ga0055531_10011386 3300003794 Bacteria 4296
15 Ga0065165_1000101 3300005262 Bacteria 141486
16 Ga0070680_100086639 3300005336 Bacteria 2589
17 Ga0070660_100029643 3300005339 Bacteria 4102
18 Ga0070679_100005137 3300005530 Bacteria 12102
19 Ga0068855_100028604 3300005563 Bacteria 6668
20 Ga0068856_100097173 3300005614 Bacteria 2934
21 Ga0068860_100201666 3300005843 Bacteria 1928
22 Ga0068862_100042281 3300005844 Bacteria 3882
23 Ga0075365_10008246 3300006038 Bacteria 5897
24 Ga0075370_10004122 3300006353 Bacteria 7005
25 Ga0099823_1003331 3300006944 Bacteria 15150
26 Ga0105240_10045951 3300009093 Bacteria 5536
27 Ga0157319_1000008 3300012497 Bacteria 315600
28 Ga0157371_10000001 3300013102 Bacteria 1162285
29 Ga0213872_10000006 3300021361 Bacteria 249845
30 Ga0213872_10000342 3300021361 Bacteria 39276
31 Ga0213872_10000767 3300021361 Bacteria 23552
32 Ga0213872_10001080 3300021361 Bacteria 18787
33 Ga0209673_1016652 3300025273 Bacteria 2738
34 Ga0209564_1000008 3300025295 Bacteria 953227
35 Ga0209050_1001274 3300025298 Bacteria 28926
36 Ga0209050_1003064 3300025298 Bacteria 12869
37 Ga0209256_1000413 3300025299 Bacteria 67123
38 Ga0209256_1003828 3300025299 Bacteria 10074
39 Ga0209051_1002377 3300025303 Bacteria 13590
40 Ga0209051_1020480 3300025303 Bacteria 2846
41 Ga0209257_1000033 3300025304 Bacteria 671006
42 Ga0209257_1002153 3300025304 Bacteria 20486
43 Ga0209257_1009531 3300025304 Bacteria 5166
44 Ga0207657_10034219 3300025919 Bacteria 4572
45 Ga0207702_10072500 3300026078 Bacteria 2968
46 Ga0209389_1002327 3300027296 Bacteria 14449
47 Ga0209371_1013895 3300027312 Bacteria 2234
48 Ga0265331_10014571 3300031250 Bacteria 4179
49 Ga0265327_10000012 3300031251 Bacteria 530403
50 Ga0307408_100000442 3300031548 Bacteria 36620
51 Ga0307412_10045784 3300031911 Bacteria 2862
52 Ga0307411_10000791 3300032005 Bacteria 11757
53 Ga0373951_0008852 3300035091 Bacteria 2270
54 Ga0373939_0000606 3300035114 Bacteria 8904
55 Ga0373960_0000636 3300035121 Bacteria 7201
56 Ga0373931_0001455 3300035691 Bacteria 10175
57 Ga0395899_0000330 3300037312 Bacteria 60063
58 Ga0395899_0005975 3300037312 Bacteria 9454
59 Ga0395900_0004177 3300037418 Bacteria 15336
60 Ga0395900_0054088 3300037418 Bacteria 4132
61 Ga0395900_0295189 3300037418 Bacteria 1608
62 Ga0395898_0001779 3300037466 Bacteria 28037
63 Ga0395898_0001791 3300037466 Bacteria 27917
64 Ga0395905_0001587 3300037471 Bacteria 27075
65 Ga0395905_0007343 3300037471 Bacteria 10975
66 Ga0395901_0006073 3300038443 Bacteria 12239
67 Ga0395901_0050438 3300038443 Bacteria 4323
68 Ga0436361_0019641 3300039447 Bacteria 127735
69 Ga0436361_0288570 3300039447 Bacteria 5329
70 Ga0436361_0298494 3300039447 Bacteria 28223
71 Ga0436361_0484071 3300039447 Bacteria 47769
72 Ga0436361_0696563 3300039447 Bacteria 6406
73 Ga0436361_0724516 3300039447 Bacteria 2631
74 Ga0436361_1218785 3300039447 Bacteria 111760
75 Ga0439431_0004731 3300041997 Bacteria 2994
76 Ga0439449_0000299 3300042007 Bacteria 17855
77 Ga0466965_0013106 3300044683 Bacteria 3908
78 Ga0466961_0031758 3300044693 Bacteria 3395
79 Ga0466957_0024312 3300044842 Bacteria 3584
80 Ga0466960_0005127 3300044901 Bacteria 5184
81 Ga0451576_0024759 3300045051 Bacteria 6478
82 Ga0495617_000002 3300046452 Bacteria 710121
83 Ga0495627_000111 3300046453 Bacteria 101652
84 Ga0495603_0016885 3300046455 Bacteria 4417
85 Ga0495638_0004311 3300046460 Bacteria 10797
86 Ga0495650_0000124 3300046471 Bacteria 180310
87 Ga0495650_0000169 3300046471 Bacteria 145238
88 Ga0495650_0016556 3300046471 Bacteria 3731
89 Ga0495605_0000092 3300046474 Bacteria 115315
90 Ga0495605_0011937 3300046474 Bacteria 4830
91 Ga0495605_0025892 3300046474 Bacteria 3053
92 Ga0495584_0002589 3300046491 Bacteria 10192
93 Ga0495584_0028327 3300046491 Bacteria 2838
94 Ga0495596_0001614 3300046500 Bacteria 12826
95 Ga0495607_0036697 3300046501 Bacteria 2950
96 Ga0495607_0070287 3300046501 Bacteria 1957
97 Ga0495583_0007648 3300046506 Bacteria 6738
98 Ga0495583_0015363 3300046506 Bacteria 4167
99 Ga0495606_0000043 3300046507 Bacteria 214367
100 Ga0495606_0000972 3300046507 Bacteria 41909
101 Ga0495606_0039609 3300046507 Bacteria 3173
102 Ga0495616_0000171 3300046513 Bacteria 55006
103 Ga0495616_0018882 3300046513 Bacteria 3770
104 Ga0495632_0001214 3300046519 Bacteria 21848
105 Ga0495643_0000213 3300046522 Bacteria 89236
106 Ga0495648_0000193 3300046524 Bacteria 70395
107 Ga0495648_0000497 3300046524 Bacteria 42400
108 Ga0495648_0004465 3300046524 Bacteria 11947
109 Ga0495642_0000500 3300046528 Bacteria 20148
110 Ga0495642_0006509 3300046528 Bacteria 4480
111 Ga0495654_0007558 3300046530 Bacteria 6060
112 Ga0495654_0022314 3300046530 Bacteria 3288
113 Ga0495654_0042989 3300046530 Bacteria 2241
114 Ga0495609_0000363 3300046538 Bacteria 38970
115 Ga0495609_0015656 3300046538 Bacteria 3546
116 Ga0495597_0001422 3300046542 Bacteria 17215
117 Ga0495633_0033628 3300046558 Bacteria 2471
118 Ga0495668_0003970 3300046616 Bacteria 10780
119 Ga0495625_0007211 3300046660 Bacteria 9731
120 Ga0495659_0000004 3300046664 Bacteria 143914
121 Ga0495661_0043058 3300046665 Bacteria 2778
122 Ga0495588_0029666 3300046674 Bacteria 2745
123 Ga0495588_0029911 3300046674 Bacteria 2734
124 Ga0495671_0000067 3300046692 Bacteria 103441
125 Ga0495671_0000213 3300046692 Bacteria 50627
126 Ga0495589_0000848 3300046794 Bacteria 19173
127 Ga0495589_0001991 3300046794 Bacteria 11564
128 Ga0495589_0002435 3300046794 Bacteria 10465
129 Ga0495660_0002559 3300046810 Bacteria 11588
130 Ga0495660_0020376 3300046810 Bacteria 3801
131 Ga0495660_0023526 3300046810 Bacteria 3513
132 Ga0495660_0044791 3300046810 Bacteria 2432
133 Ga0495672_0000045 3300047320 Bacteria 255145
134 Ga0495672_0000050 3300047320 Bacteria 240336
135 Ga0495672_0001058 3300047320 Bacteria 28103
136 Ga0495672_0006018 3300047320 Bacteria 9491
137 Ga0495683_0003317 3300047323 Bacteria 9407
138 Ga0495677_0024484 3300047445 Bacteria 2189
139 Ga0495681_0000057 3300047470 Bacteria 103340
140 Ga0495686_0000279 3300047472 Bacteria 90202
141 Ga0495686_0011870 3300047472 Bacteria 6125
142 Ga0495686_0031899 3300047472 Bacteria 3413
143 Ga0495626_0012847 3300048091 Bacteria 4371
144 Ga0496102_0000159 3300048905 Bacteria 91043
145 Ga0496103_0007438 3300048906 Bacteria 6529
146 Ga0496114_0138143 3300048917 Bacteria 2108
147 Ga0496115_0005820 3300048918 Bacteria 8983
148 Ga0496124_0005881 3300048927 Bacteria 13580
149 Ga0496124_0039752 3300048927 Bacteria 4074
150 Ga0496126_0056162 3300048929 Bacteria 3560
151 Ga0495678_000105 3300049459 Bacteria 103599
152 nmdc:mga07m45_681_c1 3300050496 Bacteria 14435
153 Ga0500622_0009338 3300053156 Bacteria 5431
154 2512729874 2512564039 Bacteria 8739048
155 2524191875 2524023129 Bacteria 6762600
156 2587742336 2585428059 Bacteria 8696589
157 2595319138 2593339198 Bacteria 7267884
158 2643932772 2643221585 Bacteria 5812563
159 2644251468 2643221645 Bacteria 7207331
160 2644260267 2643221646 Bacteria 6433402
161 2644314022 2643221656 Bacteria 5809961
162 2644423697 2643221676 Bacteria 8119172
163 2673822436 2671180694 Bacteria 7506943
164 2739056076 2738541337 Bacteria 6183410
165 2809144483 2808606418 Bacteria 6724496
166 2819674291 2818991459 Bacteria 8736032
167 2831869129 2831864461 Bacteria 6502356
168 2857457701 2857453340 Bacteria 8090534
169 2881103805 2881101125 Bacteria 4590519
170 2889299607 2889295896 Bacteria 4704906
171 2904119557 2904113452 Bacteria 7796941
172 2904762630 2904755435 Bacteria 7986759
173 2919430424 2919425241 Bacteria 8055701
174 2925327491 2925326138 Bacteria 9652120
175 2971410697 2971410472 Bacteria 8311090
176 2980183085 2980182181 Bacteria 9454109
177 2981288713 2981284811 Bacteria 4641497
178 2981293534 2981289755 Bacteria 4641509
179 2981984230 2981980479 Bacteria 4641628
180 2981989250 2981985349 Bacteria 4641497
181 2998348268 2998344455 Bacteria 4222996
182 8054796396 8054795415 Bacteria 9785225
183 8056534926 8056533031 Bacteria 8964429
184 Ga0495686_0000455
185 rootL2_10001240
186 rootL2_10003501
187 rootL2_10120187
188 rootH1_10011063
189 rootH1_10011082
190 rootH1_10016755
191 Ga0055526_1009992
192 Ga0055524_1001208
193 Ga0055531_10000001
194 Ga0055531_10000732
195 Ga0055531_10008341
196 Ga0055531_10011386
197 Ga0065165_1000101
198 Ga0070680_100086639
199 Ga0070660_100029643
200 Ga0070679_100005137
201 Ga0068855_100028604
202 Ga0068856_100097173
203 Ga0068860_100201666
204 Ga0068862_100042281
205 Ga0075365_10008246
206 Ga0075370_10004122
207 Ga0099823_1003331
208 Ga0105240_10045951
209 Ga0157319_1000008
210 Ga0157371_10000001
211 Ga0213872_10000006
212 Ga0213872_10000342
213 Ga0213872_10000767
214 Ga0213872_10001080
215 Ga0209673_1016652
216 Ga0209564_1000008
217 Ga0209050_1001274
218 Ga0209050_1003064
219 Ga0209256_1000413
220 Ga0209256_1003828
221 Ga0209051_1002377
222 Ga0209051_1020480
223 Ga0209257_1000033
224 Ga0209257_1002153
225 Ga0209257_1009531
226 Ga0207657_10034219
227 Ga0207702_10072500
228 Ga0209389_1002327
229 Ga0209371_1013895
230 Ga0265331_10014571
231 Ga0265327_10000012
232 Ga0307408_100000442
233 Ga0307412_10045784
234 Ga0307411_10000791
235 Ga0373951_0008852
236 Ga0373939_0000606
237 Ga0373960_0000636
238 Ga0373931_0001455
239 Ga0395899_0000330
240 Ga0395899_0005975
241 Ga0395900_0004177
242 Ga0395900_0054088
243 Ga0395900_0295189
244 Ga0395898_0001779
245 Ga0395898_0001791
246 Ga0395905_0001587
247 Ga0395905_0007343
248 Ga0395901_0006073
249 Ga0395901_0050438
250 Ga0436361_0019641
251 Ga0436361_0288570
252 Ga0436361_0298494
253 Ga0436361_0484071
254 Ga0436361_0696563
255 Ga0436361_0724516
256 Ga0436361_1218785
257 Ga0439431_0004731
258 Ga0439449_0000299
259 Ga0466965_0013106
260 Ga0466961_0031758
261 Ga0466957_0024312
262 Ga0466960_0005127
263 Ga0451576_0024759
264 Ga0495617_000002
265 Ga0495627_000111
266 Ga0495603_0016885
267 Ga0495638_0004311
268 Ga0495650_0000124
269 Ga0495650_0000169
270 Ga0495650_0016556
271 Ga0495605_0000092
272 Ga0495605_0011937
273 Ga0495605_0025892
274 Ga0495584_0002589
275 Ga0495584_0028327
276 Ga0495596_0001614
277 Ga0495607_0036697
278 Ga0495607_0070287
279 Ga0495583_0007648
280 Ga0495583_0015363
281 Ga0495606_0000043
282 Ga0495606_0000972
283 Ga0495606_0039609
284 Ga0495616_0000171
285 Ga0495616_0018882
286 Ga0495632_0001214
287 Ga0495643_0000213
288 Ga0495648_0000193
289 Ga0495648_0000497
290 Ga0495648_0004465
291 Ga0495642_0000500
292 Ga0495642_0006509
293 Ga0495654_0007558
294 Ga0495654_0022314
295 Ga0495654_0042989
296 Ga0495609_0000363
297 Ga0495609_0015656
298 Ga0495597_0001422
299 Ga0495633_0033628
300 Ga0495668_0003970
301 Ga0495625_0007211
302 Ga0495659_0000004
303 Ga0495661_0043058
304 Ga0495588_0029666
305 Ga0495588_0029911
306 Ga0495671_0000067
307 Ga0495671_0000213
308 Ga0495589_0000848
309 Ga0495589_0001991
310 Ga0495589_0002435
311 Ga0495660_0002559
312 Ga0495660_0020376
313 Ga0495660_0023526
314 Ga0495660_0044791
315 Ga0495672_0000045
316 Ga0495672_0000050
317 Ga0495672_0001058
318 Ga0495672_0006018
319 Ga0495683_0003317
320 Ga0495677_0024484
321 Ga0495681_0000057
322 Ga0495686_0000279
323 Ga0495686_0011870
324 Ga0495686_0031899
325 Ga0495626_0012847
326 Ga0496102_0000159
327 Ga0496103_0007438
328 Ga0496114_0138143
329 Ga0496115_0005820
330 Ga0496124_0005881
331 Ga0496124_0039752
332 Ga0496126_0056162
333 Ga0495678_000105
334 nmdc:mga07m45_681_c1
335 Ga0500622_0009338
336 2512729874
337 2524191875
338 2587742336
339 2595319138
340 2643932772
341 2644251468
342 2644260267
343 2644314022
344 2644423697
345 2673822436
346 2739056076
347 2809144483
348 2819674291
349 2831869129
350 2857457701
351 2881103805
352 2889299607
353 2904119557
354 2904762630
355 2919430424
356 2925327491
357 2971410697
358 2980183085
359 2981288713
360 2981293534
361 2981984230
362 2981989250
363 2998348268
364 8054796396
365 8056534926

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

383

526

0.91

PF00664

ABC_membrane

ABC transporter transmembrane region

19

291

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vx4-assembly1.cif.gz_A crystal structure of the nucleotide-binding domain of s. mutans coma, a bifunctional atp-binding cassette transporter involved in the quorum-sensing pathway 0.9451 331 569
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9407 335 574
2fgj-assembly3.cif.gz_C crystal structure of the abc-cassette h662a mutant of hlyb with bound atp 0.9322 335 574
2ixe-assembly1.cif.gz_A crystal structure of the atpase domain of tap1 with atp (d645n mutant) 0.9275 325 572
2fgk-assembly2.cif.gz_B crystal structure of the abc-cassette e631q mutant of hlyb with bound atp 0.9257 335 574
ID Description Score Start End Superfamily
af_P77265_327_585_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9607 327 583 3.40.50.300
5mkkB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9517 326 575 3.40.50.300
3vx4D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9448 331 571 3.40.50.300
af_A0A1D6Q2V7_231_304_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9429 332 399 3.40.50.300
af_P9WQJ7_327_576_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9418 333 578 3.40.50.300
ID Description Score Start End GO Terms
AF-T0VG12-F1-model_v4 deleted 0.9647 336 582
AF-A0A652JU67-F1-model_v4 ABC transporter ATP-binding protein 0.9618 329 569 GO:0005524
GO:0015421
GO:0016887
GO:0090374
AF-T0VG12-F1-model_v4 deleted 0.9455 336 582
AF-A0A444J7Z8-F1-model_v4 ABC transporter 0.9403 415 577 GO:0005524
GO:0015421
GO:0016887
AF-A0A7S3N3E6-F1-model_v4 ABC transmembrane type-1 domain-containing protein 0.94 412 582 GO:0005524
GO:0005743
GO:0015421
GO:0016887
GO:0090374

Map