F280375

General Info

Members Datasets Scaffolds Average Seq Length
183 150 169 358

Family's Representative Sequence

Representative Sequence 3300005367|Ga0070667_100003069|Ga0070667_10000306913
Length 378
Sequence MTRLLIVDDSPLMRRLLGEIFAEAGDFTVDIARSGEEALAKLAPFAPDVVTLDIQMPGMDGLACLDRIMIEHPCPVVMVSALTEEGAEETLEALAIGAVDFIPKPGGALSIAIEDIAENLVERVRAAARARIPRSARLADRLRHGRTRTTRKVSLRNSDAPVLAERTEALPVVEREPGLPLAGIEAVLVGVSTGGPPALDALLQPLPADFPWPIVIAQHMPGSFTGPLARRLDRLCAIDVVEASAPVPLRPGCAYIGRGDADLLLTRRGGVPHVLAAPEATDHPWHPSVDRLVASARRVFAAEQLVGVLMTGMGNDGAREMAAMRAAGGHVIAQDEHSAVVWGMPGALVAADGADLQLSPPQIAAQLIAWSRSGGATP

Samples

Sample ID Description Type Environment
1 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
2 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
3 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
4 2643221599 Rhizobium sp. Root708 Isolate Unclassified
5 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
6 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
7 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
8 2841911363 Bosea caraganae RCAM04685 Isolate Nodule
9 2841917233 Bosea caraganae RCAM04680 Isolate Nodule
10 2897803580 Azospirillum doebereinerae GSF71 Isolate Unclassified
11 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
12 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
13 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
14 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
15 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
16 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
33 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
34 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
35 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
50 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
63 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
67 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
68 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
71 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
75 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
76 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
77 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
87 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
88 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
89 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
90 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
91 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
92 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
93 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
94 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
95 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
96 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
97 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
98 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
99 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
100 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
101 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
102 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
103 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
104 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
105 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
106 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
109 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
110 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
111 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
112 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
113 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
114 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
115 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
116 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
117 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
118 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
119 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
120 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
121 3300049658 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F3_B_0_drought Metagenome Rhizosphere
122 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
123 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
124 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
125 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
126 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
127 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
128 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
129 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
130 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
131 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
132 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
133 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
136 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
137 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
138 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
139 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
140 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
141 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
142 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
143 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
144 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
145 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
146 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
147 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
148 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
149 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
150 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.35
Metatranscriptomes 0
Isolates 7.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.5
Nodule 1.64
Rhizoplane 4.92
Rhizosphere 59.56
Stem 0
Stem Tuber 0
Unclassified 10.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10069773 3300003322 Bacteria 6790
2 Ga0055524_1006141 3300003775 Bacteria 5250
3 Ga0055536_1028713 3300003781 Bacteria 1510
4 Ga0070666_10029622 3300005335 Bacteria 3600
5 Ga0070661_100082068 3300005344 Bacteria 2381
6 Ga0070668_100000113 3300005347 Bacteria 50427
7 Ga0070669_100033351 3300005353 Bacteria 3724
8 Ga0070671_100000404 3300005355 Bacteria 29767
9 Ga0070671_100162148 3300005355 Bacteria 1890
10 Ga0070673_100025806 3300005364 Bacteria 4331
11 Ga0070667_100000760 3300005367 Bacteria 30664
12 Ga0070667_100003069 3300005367 Bacteria 14355
13 Ga0070684_100386201 3300005535 Bacteria 1290
14 Ga0070665_100090919 3300005548 Bacteria 3058
15 Ga0070665_100131656 3300005548 Bacteria 2503
16 Ga0068852_100332401 3300005616 Bacteria 1479
17 Ga0068859_100037493 3300005617 Bacteria 4865
18 Ga0068864_100001214 3300005618 Bacteria 21408
19 Ga0068863_100000635 3300005841 Bacteria 35541
20 Ga0068863_100001677 3300005841 Bacteria 21920
21 Ga0068863_100003075 3300005841 Bacteria 16488
22 Ga0068863_100045658 3300005841 Bacteria 4158
23 Ga0068860_100000329 3300005843 Bacteria 64404
24 Ga0068860_100077839 3300005843 Bacteria 3154
25 Ga0068862_100000420 3300005844 Bacteria 45999
26 Ga0081540_1009162 3300005983 Bacteria 6829
27 Ga0075365_10010530 3300006038 Bacteria 5389
28 Ga0075368_10000110 3300006042 Bacteria 21315
29 Ga0075363_100000003 3300006048 Bacteria 61893
30 Ga0075363_100085392 3300006048 Bacteria 1731
31 Ga0075364_10000536 3300006051 Bacteria 19351
32 Ga0070712_100214161 3300006175 Bacteria 1521
33 Ga0075362_10000048 3300006177 Bacteria 40628
34 Ga0075367_10000060 3300006178 Bacteria 26825
35 Ga0075367_10127201 3300006178 Bacteria 1573
36 Ga0075369_10001196 3300006186 Bacteria 8790
37 Ga0075366_10003515 3300006195 Bacteria 8278
38 Ga0075366_10017632 3300006195 Bacteria 4112
39 Ga0075370_10008844 3300006353 Bacteria 5200
40 Ga0075370_10020642 3300006353 Bacteria 3603
41 Ga0075370_10065837 3300006353 Bacteria 2067
42 Ga0075428_100055943 3300006844 Bacteria 4322
43 Ga0075431_100024349 3300006847 Bacteria 6202
44 Ga0075429_100061378 3300006880 Bacteria 3275
45 Ga0097620_100037492 3300006931 Bacteria 4865
46 Ga0114129_10116584 3300009147 Bacteria 3680
47 Ga0209676_1000026 3300025292 Bacteria 574599
48 Ga0209256_1000536 3300025299 Bacteria 55043
49 Ga0207680_10092717 3300025903 Bacteria 1925
50 Ga0207647_10030358 3300025904 Bacteria 3488
51 Ga0207693_10098949 3300025915 Bacteria 2287
52 Ga0207649_10045987 3300025920 Bacteria 2679
53 Ga0207650_10148184 3300025925 Bacteria 1850
54 Ga0207644_10000149 3300025931 Bacteria 50342
55 Ga0207689_10091804 3300025942 Bacteria 2495
56 Ga0207679_10072256 3300025945 Bacteria 2605
57 Ga0207668_10000153 3300025972 Bacteria 47612
58 Ga0207668_10045180 3300025972 Bacteria 3002
59 Ga0207658_10000324 3300025986 Bacteria 48133
60 Ga0207658_10002704 3300025986 Bacteria 12793
61 Ga0207641_10000242 3300026088 Bacteria 70950
62 Ga0207641_10000728 3300026088 Bacteria 35344
63 Ga0207641_10003547 3300026088 Bacteria 13795
64 Ga0207641_10114609 3300026088 Bacteria 2395
65 Ga0207676_10001031 3300026095 Bacteria 21326
66 Ga0209813_10000018 3300027866 Bacteria 75656
67 Ga0268266_10048501 3300028379 Bacteria 3641
68 Ga0268266_10430744 3300028379 Bacteria 1251
69 Ga0268265_10000409 3300028380 Bacteria 46033
70 Ga0268264_10000349 3300028381 Bacteria 70208
71 Ga0268264_10097866 3300028381 Bacteria 2544
72 Ga0265326_10018546 3300028558 Bacteria 2004
73 Ga0265334_10003172 3300028573 Bacteria 7504
74 Ga0265323_10035829 3300028653 Bacteria 1828
75 Ga0265338_10008100 3300028800 Bacteria 12841
76 Ga0265324_10000060 3300029957 Bacteria 92715
77 Ga0265324_10010322 3300029957 Bacteria 3606
78 Ga0265330_10033345 3300031235 Bacteria 2303
79 Ga0265339_10000063 3300031249 Bacteria 93016
80 Ga0265316_10004470 3300031344 Bacteria 13904
81 Ga0265316_10198273 3300031344 Bacteria 1489
82 Ga0265313_10004733 3300031595 Bacteria 10267
83 Ga0265314_10018401 3300031711 Bacteria 5446
84 Ga0265342_10007805 3300031712 Bacteria 7778
85 Ga0265342_10022761 3300031712 Bacteria 3979
86 Ga0265342_10046347 3300031712 Bacteria 2613
87 Ga0307406_10005738 3300031901 Bacteria 6799
88 Ga0307412_10000234 3300031911 Bacteria 36311
89 Ga0307412_10010484 3300031911 Bacteria 5340
90 Ga0307409_100021078 3300031995 Bacteria 4460
91 Ga0307416_100032574 3300032002 Bacteria 3940
92 Ga0307414_10092351 3300032004 Bacteria 2253
93 Ga0307411_10052784 3300032005 Bacteria 2660
94 Ga0307415_100110940 3300032126 Bacteria 2035
95 Ga0395900_0003864 3300037418 Bacteria 16007
96 Ga0395898_0027480 3300037466 Bacteria 5711
97 Ga0395905_0013182 3300037471 Bacteria 7935
98 Ga0395901_0002379 3300038443 Bacteria 19131
99 Ga0436361_1064448 3300039447 Bacteria 11122
100 Ga0466965_0028151 3300044683 Bacteria 2729
101 Ga0453684_0000470 3300044712 Bacteria 160002
102 Ga0466968_0002188 3300044735 Bacteria 7136
103 Ga0466968_0070240 3300044735 Bacteria 1523
104 Ga0495592_0073463 3300046454 Bacteria 2487
105 Ga0495629_0234479 3300046459 Bacteria 1265
106 Ga0495607_0027283 3300046501 Bacteria 3533
107 Ga0495610_0003548 3300046512 Bacteria 12081
108 Ga0495630_0093736 3300046517 Bacteria 2270
109 Ga0495640_0057096 3300046533 Bacteria 2665
110 Ga0495635_0032435 3300046663 Bacteria 3624
111 Ga0495623_0070062 3300046679 Bacteria 2185
112 Ga0495671_0093297 3300046692 Bacteria 1473
113 Ga0495600_0033005 3300046809 Bacteria 3360
114 Ga0495675_0131790 3300047444 Bacteria 1553
115 Ga0495673_0009622 3300047469 Bacteria 5331
116 Ga0495686_0091939 3300047472 Unclassified 1841
117 Ga0495602_0105146 3300048088 Bacteria 2308
118 Ga0495626_0002617 3300048091 Bacteria 12257
119 Ga0496104_0078047 3300048907 Bacteria 3155
120 Ga0496105_0041836 3300048908 Bacteria 3776
121 Ga0496107_0193639 3300048910 Bacteria 1511
122 Ga0496110_0145134 3300048913 Bacteria 2146
123 Ga0496112_0013213 3300048915 Bacteria 7618
124 Ga0496112_0048421 3300048915 Bacteria 4167
125 Ga0496112_0385050 3300048915 Bacteria 1343
126 Ga0496114_0028422 3300048917 Bacteria 4588
127 Ga0496119_0095271 3300048922 Bacteria 1682
128 Ga0496121_0000085 3300048924 Bacteria 223810
129 Ga0496121_0006567 3300048924 Bacteria 14361
130 Ga0496122_0011937 3300048925 Bacteria 8722
131 Ga0496123_0001846 3300048926 Bacteria 27813
132 Ga0496124_0000830 3300048927 Bacteria 50338
133 Ga0496124_0031765 3300048927 Bacteria 4670
134 Ga0496125_0015111 3300048928 Bacteria 7485
135 Ga0496126_0001829 3300048929 Bacteria 31042
136 Ga0496126_0277264 3300048929 Bacteria 1390
137 Ga0495678_056086 3300049459 Unclassified 1500
138 Ga0501211_001049 3300049658 Bacteria 2918
139 Ga0501249_000075 3300049679 Bacteria 34091
140 Ga0501225_0007581 3300049705 Bacteria 3144
141 Ga0501044_0001907 3300049823 Bacteria 24128
142 nmdc:mga03683_45_c1 3300050489 Bacteria 58869
143 nmdc:mga03n38_2_c1 3300050490 Bacteria 83515
144 nmdc:mga03n38_70329_c1 3300050490 Bacteria 1618
145 nmdc:mga00v17_20_c1 3300050491 Bacteria 110672
146 nmdc:mga0yw44_21053_c1 3300050492 Bacteria 3632
147 nmdc:mga0k408_31924_c1 3300050493 Bacteria 3009
148 nmdc:mga06z11_29_c1 3300050494 Bacteria 60343
149 nmdc:mga04h51_51_c1 3300050495 Bacteria 37763
150 nmdc:mga07m45_24_c1 3300050496 Bacteria 110671
151 nmdc:mga07m45_27701_c1 3300050496 Bacteria 3124
152 nmdc:mga05p37_21538_c1 3300050507 Bacteria 7810
153 nmdc:mga09592_174743_c1 3300050508 Bacteria 1858
154 nmdc:mga0sz30_1056_c1 3300050516 Bacteria 9932
155 Ga0495601_0004860 3300053077 Bacteria 7798
156 Ga0500643_001729 3300053087 Bacteria 12096
157 Ga0500647_0017216 3300053091 Bacteria 3329
158 Ga0500555_030167 3300053103 Bacteria 1540
159 Ga0500592_005949 3300053116 Bacteria 1940
160 Ga0500607_001022 3300053121 Bacteria 26553
161 Ga0500608_000155 3300053122 Bacteria 28458
162 Ga0500618_000070 3300053125 Bacteria 86080
163 Ga0500559_0001305 3300053136 Bacteria 14395
164 Ga0500559_0001695 3300053136 Bacteria 12133
165 Ga0500573_0000021 3300053140 Bacteria 159093
166 Ga0500622_0017842 3300053156 Bacteria 3775
167 Ga0500627_0077687 3300053158 Bacteria 1477
168 Ga0500645_001692 3300053730 Bacteria 10768
169 Ga0501084_0211327 3300054114 Bacteria 1637

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046459 Ga0495629_0234479 Ga0495629_0234479_339_1250 289
2 3300046517 Ga0495630_0093736 Ga0495630_0093736_295_1407 316
3 3300006844 Ga0075428_100055943 Ga0075428_1000559432 319
4 3300006847 Ga0075431_100024349 Ga0075431_1000243492 319
5 3300006880 Ga0075429_100061378 Ga0075429_1000613782 319
6 3300050507 nmdc:mga05p37_21538_c1 nmdc:mga05p37_21538_c1_2432_3532 319
7 3300050508 nmdc:mga09592_174743_c1 nmdc:mga09592_174743_c1_146_1246 319
8 3300009147 Ga0114129_10116584 Ga0114129_101165845 320
9 3300031995 Ga0307409_100021078 Ga0307409_1000210784 320
10 3300032002 Ga0307416_100032574 Ga0307416_1000325745 320
11 3300032004 Ga0307414_10092351 Ga0307414_100923512 320
12 3300032005 Ga0307411_10052784 Ga0307411_100527843 320
13 3300032126 Ga0307415_100110940 Ga0307415_1001109402 320
14 3300048915 Ga0496112_0013213 Ga0496112_0013213_4574_5698 320
15 3300048910 Ga0496107_0193639 Ga0496107_0193639_345_1430 323
16 3300044735 Ga0466968_0002188 Ga0466968_0002188_5215_6300 324
17 3300046501 Ga0495607_0027283 Ga0495607_0027283_2406_3464 326
18 3300054114 Ga0501084_0211327 Ga0501084_0211327_55_1242 330
19 3300048915 Ga0496112_0385050 Ga0496112_0385050_107_1216 331
20 3300006175 Ga0070712_100214161 Ga0070712_1002141612 335
21 3300025915 Ga0207693_10098949 Ga0207693_100989492 335
22 3300005344 Ga0070661_100082068 Ga0070661_1000820682 336
23 3300005548 Ga0070665_100090919 Ga0070665_1000909193 336
24 3300006353 Ga0075370_10065837 Ga0075370_100658372 336
25 3300025920 Ga0207649_10045987 Ga0207649_100459873 336
26 3300028379 Ga0268266_10048501 Ga0268266_100485013 336
27 3300048922 Ga0496119_0095271 Ga0496119_0095271_526_1611 336
28 3300048924 Ga0496121_0006567 Ga0496121_0006567_7815_8900 336
29 3300048925 Ga0496122_0011937 Ga0496122_0011937_2048_3133 336
30 3300048926 Ga0496123_0001846 Ga0496123_0001846_20457_21542 336
31 3300048927 Ga0496124_0031765 Ga0496124_0031765_150_1235 336
32 3300053121 Ga0500607_001022 Ga0500607_001022_7367_8455 336
33 3300053136 Ga0500559_0001305 Ga0500559_0001305_3447_4535 336
34 3300005355 Ga0070671_100162148 Ga0070671_1001621481 337
35 3300005364 Ga0070673_100025806 Ga0070673_1000258063 337
36 3300006038 Ga0075365_10010530 Ga0075365_100105303 337
37 3300006042 Ga0075368_10000110 Ga0075368_100001108 337
38 3300006048 Ga0075363_100000003 Ga0075363_10000000313 337
39 3300006051 Ga0075364_10000536 Ga0075364_100005363 337
40 3300006177 Ga0075362_10000048 Ga0075362_1000004824 337
41 3300006178 Ga0075367_10000060 Ga0075367_1000006012 337
42 3300006186 Ga0075369_10001196 Ga0075369_100011968 337
43 3300006195 Ga0075366_10003515 Ga0075366_100035157 337
44 3300006353 Ga0075370_10008844 Ga0075370_100088443 337
45 3300027866 Ga0209813_10000018 Ga0209813_1000001821 337
46 3300044683 Ga0466965_0028151 Ga0466965_0028151_784_1923 337
47 3300044735 Ga0466968_0070240 Ga0466968_0070240_301_1428 337
48 3300050489 nmdc:mga03683_45_c1 nmdc:mga03683_45_c1_43789_44871 337
49 3300050490 nmdc:mga03n38_2_c1 nmdc:mga03n38_2_c1_51807_52889 337
50 3300050491 nmdc:mga00v17_20_c1 nmdc:mga00v17_20_c1_51807_52889 337
51 3300050492 nmdc:mga0yw44_21053_c1 nmdc:mga0yw44_21053_c1_2480_3562 337
52 3300050493 nmdc:mga0k408_31924_c1 nmdc:mga0k408_31924_c1_1580_2662 337
53 3300050494 nmdc:mga06z11_29_c1 nmdc:mga06z11_29_c1_13892_14974 337
54 3300050495 nmdc:mga04h51_51_c1 nmdc:mga04h51_51_c1_13892_14974 337
55 3300050496 nmdc:mga07m45_24_c1 nmdc:mga07m45_24_c1_51807_52889 337
56 3300050516 nmdc:mga0sz30_1056_c1 nmdc:mga0sz30_1056_c1_5110_6192 337
57 3300005367 Ga0070667_100000760 Ga0070667_10000076027 338
58 3300005535 Ga0070684_100386201 Ga0070684_1003862012 338
59 3300005841 Ga0068863_100003075 Ga0068863_1000030757 338
60 3300005843 Ga0068860_100000329 Ga0068860_1000003298 338
61 3300025903 Ga0207680_10092717 Ga0207680_100927172 338
62 3300025945 Ga0207679_10072256 Ga0207679_100722562 338
63 3300025986 Ga0207658_10000324 Ga0207658_1000032453 338
64 3300026088 Ga0207641_10000728 Ga0207641_1000072814 338
65 3300028381 Ga0268264_10000349 Ga0268264_100003499 338
66 3300053122 Ga0500608_000155 Ga0500608_000155_16588_17676 338
67 3300053140 Ga0500573_0000021 Ga0500573_0000021_59339_60430 338
68 3300048924 Ga0496121_0000085 Ga0496121_0000085_79524_80615 341
69 3300048929 Ga0496126_0001829 Ga0496126_0001829_23463_24554 341
70 iso_pu_bacteria 2643221599 2644008256 342
71 iso_pu_bacteria 2928130867 2928135146 342
72 iso_pu_bacteria 643348564 643598533 342
73 iso_pu_bacteria 2897803580 2897809617 343
74 3300047472 Ga0495686_0091939 Ga0495686_0091939_718_1815 344
75 3300053103 Ga0500555_030167 Ga0500555_030167_106_1194 344
76 3300053136 Ga0500559_0001695 Ga0500559_0001695_871_1959 344
77 3300053730 Ga0500645_001692 Ga0500645_001692_6024_7112 344
78 3300003775 Ga0055524_1006141 Ga0055524_10061413 345
79 3300005983 Ga0081540_1009162 Ga0081540_10091625 345
80 3300025299 Ga0209256_1000536 Ga0209256_100053634 345
81 3300028379 Ga0268266_10430744 Ga0268266_104307441 345
82 3300053156 Ga0500622_0017842 Ga0500622_0017842_2553_3644 345
83 iso_pu_bacteria 2582581294 2585204605 345
84 iso_pu_bacteria 2939669807 2939673832 345
85 iso_pu_bacteria 3003665799 3003666996 345
86 3300003781 Ga0055536_1028713 Ga0055536_10287131 346
87 3300025292 Ga0209676_1000026 Ga0209676_100002646 346
88 3300028573 Ga0265334_10003172 Ga0265334_100031724 346
89 3300039447 Ga0436361_1064448 Ga0436361_1064448_630_1730 346
90 3300044712 Ga0453684_0000470 Ga0453684_0000470_12442_13518 346
91 iso_pu_bacteria 2599185354 2600202916 346
92 iso_pu_bacteria 2643221541 2643729519 346
93 iso_pu_bacteria 2643221606 2644043876 346
94 iso_pu_bacteria 2643221671 2644392347 346
95 iso_pu_bacteria 2751185897 2753767280 346
96 3300028558 Ga0265326_10018546 Ga0265326_100185463 347
97 3300028653 Ga0265323_10035829 Ga0265323_100358292 347
98 3300028800 Ga0265338_10008100 Ga0265338_100081003 347
99 3300029957 Ga0265324_10000060 Ga0265324_1000006038 347
100 3300029957 Ga0265324_10010322 Ga0265324_100103222 347
101 3300031235 Ga0265330_10033345 Ga0265330_100333452 347
102 3300031249 Ga0265339_10000063 Ga0265339_1000006354 347
103 3300031344 Ga0265316_10004470 Ga0265316_100044705 347
104 3300031344 Ga0265316_10198273 Ga0265316_101982732 347
105 3300031595 Ga0265313_10004733 Ga0265313_100047337 347
106 3300031711 Ga0265314_10018401 Ga0265314_100184014 347
107 3300031712 Ga0265342_10007805 Ga0265342_100078054 347
108 3300031712 Ga0265342_10022761 Ga0265342_100227615 347
109 3300031712 Ga0265342_10046347 Ga0265342_100463473 347
110 3300048928 Ga0496125_0015111 Ga0496125_0015111_4478_5578 347
111 3300048929 Ga0496126_0277264 Ga0496126_0277264_200_1300 347
112 3300049679 Ga0501249_000075 Ga0501249_000075_5267_6367 347
113 3300053116 Ga0500592_005949 Ga0500592_005949_31_1131 347
114 3300053158 Ga0500627_0077687 Ga0500627_0077687_192_1292 347
115 iso_pu_bacteria 2841911363 2841911622 347
116 iso_pu_bacteria 2841917233 2841917697 347
117 3300006048 Ga0075363_100085392 Ga0075363_1000853922 348
118 3300050490 nmdc:mga03n38_70329_c1 nmdc:mga03n38_70329_c1_455_1564 348
119 3300006178 Ga0075367_10127201 Ga0075367_101272012 349
120 3300006195 Ga0075366_10017632 Ga0075366_100176323 349
121 3300049459 Ga0495678_056086 Ga0495678_056086_70_1152 349
122 3300049823 Ga0501044_0001907 Ga0501044_0001907_7125_8210 349
123 3300053125 Ga0500618_000070 Ga0500618_000070_55978_57063 349
124 3300005335 Ga0070666_10029622 Ga0070666_100296222 350
125 3300005347 Ga0070668_100000113 Ga0070668_10000011316 350
126 3300005353 Ga0070669_100033351 Ga0070669_1000333513 350
127 3300005355 Ga0070671_100000404 Ga0070671_10000040414 350
128 3300005367 Ga0070667_100003069 Ga0070667_10000306913 350
129 3300005548 Ga0070665_100131656 Ga0070665_1001316562 350
130 3300005616 Ga0068852_100332401 Ga0068852_1003324012 350
131 3300005617 Ga0068859_100037493 Ga0068859_1000374933 350
132 3300005618 Ga0068864_100001214 Ga0068864_10000121423 350
133 3300005841 Ga0068863_100000635 Ga0068863_10000063511 350
134 3300005841 Ga0068863_100001677 Ga0068863_1000016777 350
135 3300005841 Ga0068863_100045658 Ga0068863_1000456582 350
136 3300005843 Ga0068860_100077839 Ga0068860_1000778392 350
137 3300005844 Ga0068862_100000420 Ga0068862_10000042018 350
138 3300006931 Ga0097620_100037492 Ga0097620_1000374923 350
139 3300025904 Ga0207647_10030358 Ga0207647_100303582 350
140 3300025925 Ga0207650_10148184 Ga0207650_101481842 350
141 3300025931 Ga0207644_10000149 Ga0207644_1000014914 350
142 3300025942 Ga0207689_10091804 Ga0207689_100918042 350
143 3300025972 Ga0207668_10000153 Ga0207668_1000015332 350
144 3300025972 Ga0207668_10045180 Ga0207668_100451802 350
145 3300025986 Ga0207658_10002704 Ga0207658_1000270410 350
146 3300026088 Ga0207641_10000242 Ga0207641_1000024234 350
147 3300026088 Ga0207641_10003547 Ga0207641_100035475 350
148 3300026088 Ga0207641_10114609 Ga0207641_101146093 350
149 3300026095 Ga0207676_10001031 Ga0207676_1000103122 350
150 3300028380 Ga0268265_10000409 Ga0268265_1000040914 350
151 3300028381 Ga0268264_10097866 Ga0268264_100978662 350
152 3300031901 Ga0307406_10005738 Ga0307406_100057385 350
153 3300031911 Ga0307412_10000234 Ga0307412_100002343 350
154 3300031911 Ga0307412_10010484 Ga0307412_100104844 350
155 3300046454 Ga0495592_0073463 Ga0495592_0073463_346_1461 350
156 3300046533 Ga0495640_0057096 Ga0495640_0057096_444_1559 350
157 3300046663 Ga0495635_0032435 Ga0495635_0032435_522_1637 350
158 3300046679 Ga0495623_0070062 Ga0495623_0070062_941_2056 350
159 3300046692 Ga0495671_0093297 Ga0495671_0093297_216_1304 350
160 3300046809 Ga0495600_0033005 Ga0495600_0033005_700_1815 350
161 3300047444 Ga0495675_0131790 Ga0495675_0131790_106_1221 350
162 3300047469 Ga0495673_0009622 Ga0495673_0009622_1167_2255 350
163 3300048088 Ga0495602_0105146 Ga0495602_0105146_127_1242 350
164 3300048907 Ga0496104_0078047 Ga0496104_0078047_817_1941 350
165 3300048908 Ga0496105_0041836 Ga0496105_0041836_1681_2805 350
166 3300048913 Ga0496110_0145134 Ga0496110_0145134_307_1431 350
167 3300048915 Ga0496112_0048421 Ga0496112_0048421_1841_2965 350
168 3300048917 Ga0496114_0028422 Ga0496114_0028422_315_1439 350
169 3300048927 Ga0496124_0000830 Ga0496124_0000830_13939_15027 350
170 3300053077 Ga0495601_0004860 Ga0495601_0004860_4883_5998 350
171 3300053087 Ga0500643_001729 Ga0500643_001729_4115_5206 350
172 3300053091 Ga0500647_0017216 Ga0500647_0017216_832_1920 350
173 3300003322 rootL2_10069773 rootL2_100697734 351
174 3300006353 Ga0075370_10020642 Ga0075370_100206423 351
175 3300037418 Ga0395900_0003864 Ga0395900_0003864_11539_12639 351
176 3300037466 Ga0395898_0027480 Ga0395898_0027480_2363_3463 351
177 3300037471 Ga0395905_0013182 Ga0395905_0013182_6268_7368 351
178 3300038443 Ga0395901_0002379 Ga0395901_0002379_7005_8105 351
179 3300046512 Ga0495610_0003548 Ga0495610_0003548_9757_10872 351
180 3300048091 Ga0495626_0002617 Ga0495626_0002617_1697_2812 351
181 3300049658 Ga0501211_001049 Ga0501211_001049_990_2123 351
182 3300049705 Ga0501225_0007581 Ga0501225_0007581_1821_2954 351
183 3300050496 nmdc:mga07m45_27701_c1 nmdc:mga07m45_27701_c1_778_1863 351

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01339

CheB_methylest

CheB methylesterase

187

367

0.94

PF00072

Response_reg

Response regulator receiver domain

4

113

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3sft-assembly1.cif.gz_A crystal structure of thermotoga maritima cheb methylesterase catalytic domain 0.9638 163 348
1chd-assembly1.cif.gz_A cheb methylesterase domain 0.943 159 351
3sft-assembly1.cif.gz_A crystal structure of thermotoga maritima cheb methylesterase catalytic domain 0.939 163 348
6ymz-assembly5.cif.gz_E structure of the cheb methylsterase from p. atrosepticum scri1043 0.9306 3 351
6ymz-assembly5.cif.gz_E structure of the cheb methylsterase from p. atrosepticum scri1043 0.9168 3 351
ID Description Score Start End Superfamily
3sftA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylesterase CheB, C-terminal domain 0.9638 163 348 3.40.50.180
3sftA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylesterase CheB, C-terminal domain 0.939 163 348 3.40.50.180
af_P71814_19_100_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9319 3 71 3.40.50.2300
af_O69730_8_88_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9135 1 71 3.40.50.2300
af_P07330_147_349_3.40.50.180 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylesterase CheB, C-terminal domain 0.9124 152 350 3.40.50.180
ID Description Score Start End GO Terms
AF-A0A2U1X9I3-F1-model_v4 deleted 0.9981 277 350
AF-A0A3D2VWK6-F1-model_v4 protein-glutamate methylesterase (EC 3.1.1.61) 0.9705 163 350 GO:0000156
GO:0005737
GO:0006935
GO:0008984
AF-A0A381EZK3-F1-model_v4 deleted 0.9703 268 349
AF-K2C9B1-F1-model_v4 protein-glutamate methylesterase (EC 3.1.1.61) 0.9699 278 349 GO:0000156
GO:0005737
GO:0006935
GO:0008984
AF-A0A202E1X7-F1-model_v4 protein-glutamate methylesterase (EC 3.1.1.61) 0.9638 197 349 GO:0000156
GO:0005737
GO:0006935
GO:0008984

Feature Viewer

pLDDT pTM Quality
85.1 0.79 High
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Predicted Structure (AlphaFold2)

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