F280567

General Info

Members Datasets Scaffolds Average Seq Length
183 113 183 1181

Family's Representative Sequence

Representative Sequence 3300005841|Ga0068863_100004088|Ga0068863_1000040886
Length 1187
Sequence MAEFVHLHLHTEFSLLDGACRIDELLDQAAALKMPAIGVTEHGNMFSSVIFHDHARARGLKPILGCEVYMAPGSRLTKSGNPGETANHLILLAETDEGYHNLIKLVSAGYTEGFYYKPRIDRELLARHAKGLIGMSSCLKGEVAEGLSHQQDKKAYDAAAAYRDILGPDNFFLELQWHGIEEQRVVNSGLPALARDLNLPLVCTNDVHYLREADAHPHDILLCIGTGKAFTDTKRLRYDAKQFFLKTPAEMAEVFKDFPDALRNTMRIAERCNVKLQEGTNYLPNFDVPPGFTLDEYFEHVTRQGFSERLTRLQQLAAAGLLRHTIDEYERRLSYELEMIKKMEYPGYFLIVWDFIRYAREQGIPVGPGRGSAAGSLVAYCLRITDVDPIDFDLIFERFLNPERVSLPDIDIDFCERRRGEVIDYVTRKYGRENVAQIITFGTMKAKAVVRDVGRVLEMPFADVDKVAKQIPPALDMTLAKALEESEPLRLMEQNDPKVKELLSVARRLEGMTRHASVHAAGVVIAPKAITEYAPLYKGARDEIVTQWSMKEIERVGLLKMDFLGLSTLTLIDDAIAEIKSTTGEQLDIDHVPLDDAKTYQIFQEGQTYGIFQFESSGMRDILRKSKPQRLDDLIALNALYRPGPLRSGMVDTWIAGKLGRTEVKYELPQLEPILADTYGVIAYQEQVMRISNVVAGFTLGEADVLRKAMGKKNPEVMAKMRGKFVEGAKKLGTNEKKATHLFDLMEHFAGYGFNKSHSTAYAFLAYQTAYLKANYPWHFAAALLTIEAQNTDKLALYLGECRDRGVPVLPPDINESQLRFTVTPQGVRFGLTAIKNVGEGAIESLLAVRKSQGRIASLHALCEELDLRLVNKRVFESLVKAGAFDSISGETELPTASIRPRLMAAIDTACEHGARLQRDRLEGQAQLFGGFGDGGDDEAGSASPAGGRFRLPEAKPWTEAEQLAYEKETLGLYWTGHPVDRYAAALKDFGAKSIAELAEGVPTAPRDNGWGPGGPKPIEVDTSVGGIVGAVRPLKTRKGDRMAVFTLEDAGGGVEVIAFPEAFQRSAGLIESGTLVLVRGRLERDEESVRLLASEVAPLDTVRERLAREIAIHFRKPADRGTLETLGEIFARHRGDRKVSFEVETGEPPNRLRVRVDVSAQIRVRPSSALIAEVESVVGTGSVELR

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
75 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
76 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
77 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
78 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
79 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
80 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
81 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
82 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
83 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
84 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
85 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
86 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
87 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
88 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
89 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
92 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
93 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
99 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
100 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
101 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
102 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
103 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
104 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
105 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
106 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
107 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
108 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
109 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
110 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
111 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
112 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
113 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.64
Nodule 0
Rhizoplane 0.55
Rhizosphere 97.81
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10004553 3300005289 Bacteria 4925
2 Ga0065712_10000250 3300005290 Bacteria 16588
3 Ga0065707_10002090 3300005295 Bacteria 11402
4 Ga0065707_10083737 3300005295 Bacteria 8347
5 Ga0068869_100009467 3300005334 Bacteria 6322
6 Ga0068868_100002633 3300005338 Bacteria 12457
7 Ga0070660_100005717 3300005339 Bacteria 8610
8 Ga0070689_100001901 3300005340 Bacteria 13498
9 Ga0070689_100017530 3300005340 Bacteria 5262
10 Ga0070669_100001435 3300005353 Bacteria 17234
11 Ga0070675_100000679 3300005354 Bacteria 23598
12 Ga0070675_100001153 3300005354 Bacteria 19086
13 Ga0070675_100001293 3300005354 Bacteria 18299
14 Ga0070675_100012386 3300005354 Bacteria 6682
15 Ga0070675_100013092 3300005354 Bacteria 6516
16 Ga0070674_100000465 3300005356 Bacteria 20429
17 Ga0070673_100033276 3300005364 Bacteria 3891
18 Ga0070714_100002687 3300005435 Bacteria 13106
19 Ga0070705_100001284 3300005440 Bacteria 13536
20 Ga0070681_10001941 3300005458 Bacteria 18666
21 Ga0070681_10012232 3300005458 Bacteria 8507
22 Ga0068867_100001730 3300005459 Bacteria 15210
23 Ga0070699_100001247 3300005518 Bacteria 23450
24 Ga0070699_100001626 3300005518 Bacteria 20492
25 Ga0070699_100007354 3300005518 Bacteria 9589
26 Ga0070699_100027417 3300005518 Bacteria 4912
27 Ga0070672_100007732 3300005543 Bacteria 7322
28 Ga0070695_100000177 3300005545 Bacteria 30288
29 Ga0070695_100009355 3300005545 Bacteria 5830
30 Ga0070665_100002134 3300005548 Bacteria 22078
31 Ga0070665_100031848 3300005548 Bacteria 5307
32 Ga0070704_100003121 3300005549 Bacteria 9450
33 Ga0068856_100035303 3300005614 Bacteria 4899
34 Ga0068859_100020898 3300005617 Bacteria 6570
35 Ga0068864_100012359 3300005618 Bacteria 7057
36 Ga0068864_100021222 3300005618 Bacteria 5440
37 Ga0068863_100004088 3300005841 Bacteria 14415
38 Ga0068860_100003745 3300005843 Bacteria 15648
39 Ga0068860_100005901 3300005843 Bacteria 12328
40 Ga0068860_100025207 3300005843 Bacteria 5739
41 Ga0068862_100001017 3300005844 Bacteria 26955
42 Ga0068862_100008555 3300005844 Bacteria 8467
43 Ga0081539_10000056 3300005985 Bacteria 256522
44 Ga0081539_10000460 3300005985 Bacteria 86291
45 Ga0081539_10003695 3300005985 Bacteria 18270
46 Ga0075362_10007161 3300006177 Bacteria 4206
47 Ga0097621_100001195 3300006237 Bacteria 17974
48 Ga0097621_100031420 3300006237 Bacteria 4214
49 Ga0068871_100003895 3300006358 Bacteria 10285
50 Ga0075428_100000965 3300006844 Bacteria 30443
51 Ga0075428_100010755 3300006844 Bacteria 10172
52 Ga0075428_100015792 3300006844 Bacteria 8362
53 Ga0075428_100031330 3300006844 Bacteria 5880
54 Ga0075430_100000845 3300006846 Bacteria 24023
55 Ga0075430_100013897 3300006846 Bacteria 6861
56 Ga0075433_10002878 3300006852 Bacteria 13194
57 Ga0075433_10015506 3300006852 Bacteria 6254
58 Ga0075434_100000384 3300006871 Bacteria 32269
59 Ga0075429_100005834 3300006880 Bacteria 10626
60 Ga0075429_100024797 3300006880 Bacteria 5205
61 Ga0097620_100020900 3300006931 Bacteria 6570
62 Ga0075435_100005523 3300007076 Bacteria 8839
63 Ga0111539_10000056 3300009094 Bacteria 114878
64 Ga0111539_10001720 3300009094 Bacteria 29144
65 Ga0111539_10001886 3300009094 Bacteria 27864
66 Ga0111539_10016107 3300009094 Bacteria 9277
67 Ga0114129_10001088 3300009147 Bacteria 35659
68 Ga0114129_10005805 3300009147 Bacteria 17476
69 Ga0114129_10007898 3300009147 Bacteria 15143
70 Ga0114129_10008902 3300009147 Bacteria 14313
71 Ga0114129_10012829 3300009147 Bacteria 11926
72 Ga0114129_10015905 3300009147 Bacteria 10702
73 Ga0105243_10010024 3300009148 Bacteria 7206
74 Ga0105243_10023011 3300009148 Bacteria 4740
75 Ga0105248_10005395 3300009177 Bacteria 14054
76 Ga0105248_10008392 3300009177 Bacteria 11340
77 Ga0105249_10001377 3300009553 Bacteria 21263
78 Ga0157375_10001099 3300013308 Bacteria 23450
79 Ga0157380_10001063 3300014326 Bacteria 17613
80 Ga0157380_10026254 3300014326 Bacteria 4421
81 Ga0157377_10005480 3300014745 Bacteria 5968
82 Ga0163161_10008995 3300017792 Bacteria 6906
83 Ga0207697_10000103 3300025315 Bacteria 38641
84 Ga0207682_10003159 3300025893 Bacteria 7217
85 Ga0207688_10000113 3300025901 Bacteria 32645
86 Ga0207645_10000210 3300025907 Bacteria 48170
87 Ga0207643_10000149 3300025908 Bacteria 47771
88 Ga0207643_10007381 3300025908 Bacteria 5897
89 Ga0207662_10000564 3300025918 Bacteria 16458
90 Ga0207662_10002378 3300025918 Bacteria 9424
91 Ga0207657_10014324 3300025919 Bacteria 7746
92 Ga0207646_10040785 3300025922 Bacteria 4174
93 Ga0207681_10011606 3300025923 Bacteria 5414
94 Ga0207681_10015337 3300025923 Bacteria 4778
95 Ga0207681_10016594 3300025923 Bacteria 4609
96 Ga0207650_10001740 3300025925 Bacteria 15469
97 Ga0207659_10001016 3300025926 Bacteria 16674
98 Ga0207659_10004797 3300025926 Bacteria 8200
99 Ga0207644_10013987 3300025931 Bacteria 5363
100 Ga0207706_10018156 3300025933 Bacteria 6328
101 Ga0207686_10017146 3300025934 Bacteria 4076
102 Ga0207691_10000791 3300025940 Bacteria 31463
103 Ga0207691_10004444 3300025940 Bacteria 13594
104 Ga0207691_10014580 3300025940 Bacteria 7491
105 Ga0207691_10017118 3300025940 Bacteria 6877
106 Ga0207711_10008924 3300025941 Bacteria 8382
107 Ga0207689_10000712 3300025942 Bacteria 31837
108 Ga0207689_10027605 3300025942 Bacteria 4750
109 Ga0207679_10004331 3300025945 Bacteria 8831
110 Ga0207679_10013959 3300025945 Bacteria 5268
111 Ga0207703_10013890 3300026035 Bacteria 6277
112 Ga0207703_10014607 3300026035 Bacteria 6126
113 Ga0207641_10004710 3300026088 Bacteria 11764
114 Ga0207648_10000617 3300026089 Bacteria 39882
115 Ga0207675_100005402 3300026118 Bacteria 12243
116 Ga0207675_100006286 3300026118 Bacteria 11278
117 Ga0207675_100010098 3300026118 Bacteria 8850
118 Ga0207675_100020222 3300026118 Bacteria 6207
119 Ga0207683_10006271 3300026121 Bacteria 10191
120 Ga0207428_10000512 3300027907 Bacteria 46347
121 Ga0207428_10001587 3300027907 Bacteria 23675
122 Ga0207428_10002778 3300027907 Bacteria 17388
123 Ga0207428_10003596 3300027907 Bacteria 14968
124 Ga0268266_10012836 3300028379 Bacteria 7233
125 Ga0268265_10000610 3300028380 Bacteria 35662
126 Ga0268265_10003555 3300028380 Bacteria 11148
127 Ga0268264_10005268 3300028381 Bacteria 10950
128 Ga0307406_10004783 3300031901 Bacteria 7376
129 Ga0307407_10000635 3300031903 Bacteria 11257
130 Ga0307412_10020479 3300031911 Bacteria 4026
131 Ga0307414_10006397 3300032004 Bacteria 6566
132 Ga0373928_0001011 3300035084 Bacteria 5527
133 Ga0373951_0001931 3300035091 Bacteria 5329
134 Ga0373932_0001981 3300035112 Bacteria 5404
135 Ga0373960_0001911 3300035121 Bacteria 4660
136 Ga0373943_0001465 3300035170 Bacteria 10680
137 Ga0373942_0000978 3300035207 Bacteria 7770
138 Ga0373962_0000424 3300035242 Bacteria 9211
139 Ga0373937_0001439 3300036401 Bacteria 19902
140 Ga0439433_0001115 3300041999 Bacteria 5485
141 Ga0451576_0007333 3300045051 Bacteria 13230
142 Ga0451576_0035583 3300045051 Bacteria 5281
143 Ga0495629_0018069 3300046459 Bacteria 5054
144 Ga0495643_0008388 3300046522 Bacteria 6547
145 Ga0495645_0001989 3300046543 Bacteria 13891
146 Ga0495676_0023081 3300047321 Bacteria 5404
147 Ga0496101_0001880 3300048904 Bacteria 12683
148 Ga0501040_0004220 3300049576 Bacteria 9357
149 Ga0501042_0005739 3300049578 Bacteria 8018
150 Ga0501075_0006024 3300049591 Bacteria 8313
151 Ga0501079_0010127 3300049741 Bacteria 7156
152 Ga0501044_0001483 3300049823 Bacteria 27518
153 nmdc:mga00v17_1046_c1 3300050491 Bacteria 14658
154 nmdc:mga07m45_3714_c1 3300050496 Bacteria 7383
155 nmdc:mga05p37_2258_c1 3300050507 Bacteria 15356
156 nmdc:mga05p37_43447_c1 3300050507 Bacteria 5529
157 nmdc:mga05p37_4405_c1 3300050507 Bacteria 16454
158 nmdc:mga05p37_47085_c1 3300050507 Bacteria 5303
159 nmdc:mga05p37_4887_c1 3300050507 Bacteria 15686
160 nmdc:mga09592_5911_c1 3300050508 Bacteria 9981
161 nmdc:mga06r32_694_c1 3300050510 Bacteria 29350
162 nmdc:mga08y16_15992_c1 3300050511 Bacteria 7887
163 nmdc:mga08y16_1767_c1 3300050511 Bacteria 21898
164 nmdc:mga08y16_6009_c1 3300050511 Bacteria 12725
165 nmdc:mga08y16_9616_c1 3300050511 Bacteria 10152
166 nmdc:mga0n895_1057_c1 3300050512 Bacteria 20048
167 nmdc:mga0n895_13689_c1 3300050512 Bacteria 7333
168 nmdc:mga0n895_23462_c1 3300050512 Bacteria 5799
169 nmdc:mga0rr50_10384_c1 3300050513 Bacteria 5905
170 nmdc:mga0rr50_20881_c1 3300050513 Bacteria 4458
171 nmdc:mga0rr50_8_c1 3300050513 Bacteria 271775
172 nmdc:mga0rr50_9002_c1 3300050513 Bacteria 6246
173 nmdc:mga08x19_8927_c1 3300050514 Bacteria 5981
174 nmdc:mga0a205_310_c1 3300050515 Bacteria 36161
175 nmdc:mga0a205_34533_c1 3300050515 Bacteria 4851
176 nmdc:mga0a205_6636_c1 3300050515 Bacteria 10476
177 Ga0501084_0026486 3300054114 Bacteria 4839
178 Ga0590071_000265 3300059421 Bacteria 15234
179 Ga0590074_000973 3300059423 Bacteria 4495
180 Ga0590075_000112 3300059424 Bacteria 20941
181 Ga0590077_000042 3300059426 Bacteria 29090
182 Ga0590077_000414 3300059426 Bacteria 12002
183 Ga0530510_0029355 3300061734 Bacteria 3947

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050513 nmdc:mga0rr50_20881_c1 nmdc:mga0rr50_20881_c1_27_3026 981
2 3300046459 Ga0495629_0018069 Ga0495629_0018069_1975_5025 993
3 3300025918 Ga0207662_10000564 Ga0207662_100005642 1095
4 3300025931 Ga0207644_10013987 Ga0207644_100139872 1095
5 3300006177 Ga0075362_10007161 Ga0075362_100071611 1099
6 3300025942 Ga0207689_10027605 Ga0207689_100276053 1099
7 3300050491 nmdc:mga00v17_1046_c1 nmdc:mga00v17_1046_c1_3686_7150 1099
8 3300050496 nmdc:mga07m45_3714_c1 nmdc:mga07m45_3714_c1_1189_4653 1099
9 3300005295 Ga0065707_10002090 Ga0065707_100020902 1102
10 3300050512 nmdc:mga0n895_13689_c1 nmdc:mga0n895_13689_c1_2729_6310 1132
11 3300050513 nmdc:mga0rr50_9002_c1 nmdc:mga0rr50_9002_c1_1618_5199 1132
12 3300009147 Ga0114129_10012829 Ga0114129_100128293 1142
13 3300050507 nmdc:mga05p37_2258_c1 nmdc:mga05p37_2258_c1_1214_4690 1142
14 3300035170 Ga0373943_0001465 Ga0373943_0001465_3585_7142 1145
15 3300036401 Ga0373937_0001439 Ga0373937_0001439_15799_19269 1147
16 3300005518 Ga0070699_100001247 Ga0070699_10000124712 1149
17 3300050514 nmdc:mga08x19_8927_c1 nmdc:mga08x19_8927_c1_1524_5123 1149
18 3300005354 Ga0070675_100000679 Ga0070675_10000067911 1150
19 3300025926 Ga0207659_10001016 Ga0207659_1000101611 1150
20 3300014326 Ga0157380_10026254 Ga0157380_100262542 1151
21 3300005614 Ga0068856_100035303 Ga0068856_1000353032 1152
22 3300059423 Ga0590074_000973 Ga0590074_000973_847_4335 1152
23 3300059424 Ga0590075_000112 Ga0590075_000112_7891_11379 1152
24 3300059426 Ga0590077_000042 Ga0590077_000042_1343_4831 1152
25 3300061734 Ga0530510_0029355 Ga0530510_0029355_277_3753 1153
26 3300005459 Ga0068867_100001730 Ga0068867_1000017302 1156
27 3300005843 Ga0068860_100025207 Ga0068860_1000252072 1156
28 3300009148 Ga0105243_10010024 Ga0105243_100100242 1156
29 3300025934 Ga0207686_10017146 Ga0207686_100171462 1156
30 3300026089 Ga0207648_10000617 Ga0207648_1000061727 1156
31 3300006237 Ga0097621_100031420 Ga0097621_1000314202 1157
32 3300005339 Ga0070660_100005717 Ga0070660_1000057174 1159
33 3300025919 Ga0207657_10014324 Ga0207657_100143243 1159
34 3300005545 Ga0070695_100009355 Ga0070695_1000093553 1160
35 3300025922 Ga0207646_10040785 Ga0207646_100407852 1160
36 3300005435 Ga0070714_100002687 Ga0070714_1000026876 1161
37 3300050507 nmdc:mga05p37_47085_c1 nmdc:mga05p37_47085_c1_1034_4588 1161
38 3300009177 Ga0105248_10005395 Ga0105248_100053954 1162
39 3300025941 Ga0207711_10008924 Ga0207711_100089243 1162
40 3300046543 Ga0495645_0001989 Ga0495645_0001989_2787_6344 1162
41 3300005440 Ga0070705_100001284 Ga0070705_1000012846 1163
42 3300009147 Ga0114129_10008902 Ga0114129_100089027 1163
43 3300050507 nmdc:mga05p37_43447_c1 nmdc:mga05p37_43447_c1_1258_4821 1163
44 3300006852 Ga0075433_10015506 Ga0075433_100155064 1164
45 3300050515 nmdc:mga0a205_6636_c1 nmdc:mga0a205_6636_c1_3841_7404 1164
46 3300009094 Ga0111539_10001886 Ga0111539_100018868 1165
47 3300050515 nmdc:mga0a205_34533_c1 nmdc:mga0a205_34533_c1_859_4443 1165
48 3300050512 nmdc:mga0n895_23462_c1 nmdc:mga0n895_23462_c1_656_4240 1166
49 3300047321 Ga0495676_0023081 Ga0495676_0023081_332_3907 1167
50 3300005458 Ga0070681_10001941 Ga0070681_100019413 1168
51 3300014326 Ga0157380_10001063 Ga0157380_100010635 1168
52 3300049578 Ga0501042_0005739 Ga0501042_0005739_2788_6423 1168
53 3300049591 Ga0501075_0006024 Ga0501075_0006024_2490_6125 1168
54 3300054114 Ga0501084_0026486 Ga0501084_0026486_762_4397 1168
55 3300041999 Ga0439433_0001115 Ga0439433_0001115_48_3569 1169
56 3300005364 Ga0070673_100033276 Ga0070673_1000332761 1170
57 3300026118 Ga0207675_100010098 Ga0207675_1000100983 1170
58 3300048904 Ga0496101_0001880 Ga0496101_0001880_5709_9245 1170
59 3300035084 Ga0373928_0001011 Ga0373928_0001011_43_3600 1172
60 3300035091 Ga0373951_0001931 Ga0373951_0001931_1202_4759 1172
61 3300035112 Ga0373932_0001981 Ga0373932_0001981_814_4371 1172
62 3300035121 Ga0373960_0001911 Ga0373960_0001911_814_4371 1172
63 3300035207 Ga0373942_0000978 Ga0373942_0000978_3365_6922 1172
64 3300035242 Ga0373962_0000424 Ga0373962_0000424_3323_6880 1172
65 3300050513 nmdc:mga0rr50_8_c1 nmdc:mga0rr50_8_c1_197003_200563 1172
66 3300005353 Ga0070669_100001435 Ga0070669_1000014353 1173
67 3300005518 Ga0070699_100007354 Ga0070699_1000073543 1173
68 3300005617 Ga0068859_100020898 Ga0068859_1000208983 1173
69 3300005841 Ga0068863_100004088 Ga0068863_1000040886 1173
70 3300005844 Ga0068862_100008555 Ga0068862_1000085554 1173
71 3300005985 Ga0081539_10000460 Ga0081539_1000046047 1173
72 3300006237 Ga0097621_100001195 Ga0097621_1000011955 1173
73 3300006358 Ga0068871_100003895 Ga0068871_1000038951 1173
74 3300006844 Ga0075428_100000965 Ga0075428_1000009653 1173
75 3300006931 Ga0097620_100020900 Ga0097620_1000209003 1173
76 3300009094 Ga0111539_10016107 Ga0111539_100161077 1173
77 3300009147 Ga0114129_10001088 Ga0114129_100010882 1173
78 3300009147 Ga0114129_10007898 Ga0114129_100078985 1173
79 3300009148 Ga0105243_10023011 Ga0105243_100230112 1173
80 3300009177 Ga0105248_10008392 Ga0105248_100083927 1173
81 3300013308 Ga0157375_10001099 Ga0157375_1000109915 1173
82 3300025908 Ga0207643_10007381 Ga0207643_100073812 1173
83 3300025923 Ga0207681_10011606 Ga0207681_100116062 1173
84 3300025923 Ga0207681_10016594 Ga0207681_100165942 1173
85 3300025940 Ga0207691_10017118 Ga0207691_100171182 1173
86 3300026088 Ga0207641_10004710 Ga0207641_100047106 1173
87 3300026118 Ga0207675_100005402 Ga0207675_1000054026 1173
88 3300026118 Ga0207675_100020222 Ga0207675_1000202223 1173
89 3300028380 Ga0268265_10000610 Ga0268265_100006107 1173
90 3300028380 Ga0268265_10003555 Ga0268265_100035555 1173
91 3300050507 nmdc:mga05p37_4405_c1 nmdc:mga05p37_4405_c1_8369_11932 1173
92 3300050511 nmdc:mga08y16_6009_c1 nmdc:mga08y16_6009_c1_844_4404 1173
93 3300005548 Ga0070665_100002134 Ga0070665_1000021345 1174
94 3300005985 Ga0081539_10000056 Ga0081539_10000056106 1174
95 3300026035 Ga0207703_10014607 Ga0207703_100146072 1174
96 3300026121 Ga0207683_10006271 Ga0207683_100062715 1174
97 3300028379 Ga0268266_10012836 Ga0268266_100128363 1174
98 3300049823 Ga0501044_0001483 Ga0501044_0001483_3083_6643 1174
99 3300007076 Ga0075435_100005523 Ga0075435_1000055233 1175
100 3300045051 Ga0451576_0007333 Ga0451576_0007333_8972_12604 1175
101 3300045051 Ga0451576_0035583 Ga0451576_0035583_1695_5264 1175
102 3300050513 nmdc:mga0rr50_10384_c1 nmdc:mga0rr50_10384_c1_853_4422 1175
103 3300031903 Ga0307407_10000635 Ga0307407_100006353 1176
104 3300005458 Ga0070681_10012232 Ga0070681_100122324 1177
105 3300006852 Ga0075433_10002878 Ga0075433_100028785 1177
106 3300050515 nmdc:mga0a205_310_c1 nmdc:mga0a205_310_c1_9736_13407 1177
107 3300005985 Ga0081539_10003695 Ga0081539_100036952 1178
108 3300005354 Ga0070675_100012386 Ga0070675_1000123862 1179
109 3300005545 Ga0070695_100000177 Ga0070695_1000001773 1179
110 3300005354 Ga0070675_100001153 Ga0070675_10000115313 1180
111 3300025926 Ga0207659_10004797 Ga0207659_100047972 1180
112 3300059426 Ga0590077_000414 Ga0590077_000414_4527_8087 1180
113 3300046522 Ga0495643_0008388 Ga0495643_0008388_240_3857 1182
114 3300025925 Ga0207650_10001740 Ga0207650_100017403 1183
115 3300025945 Ga0207679_10013959 Ga0207679_100139591 1183
116 3300049576 Ga0501040_0004220 Ga0501040_0004220_3433_7068 1183
117 3300049741 Ga0501079_0010127 Ga0501079_0010127_1612_5247 1183
118 3300031911 Ga0307412_10020479 Ga0307412_100204791 1184
119 3300059421 Ga0590071_000265 Ga0590071_000265_8763_12386 1184
120 3300005618 Ga0068864_100012359 Ga0068864_1000123593 1185
121 3300009094 Ga0111539_10000056 Ga0111539_1000005662 1185
122 3300009147 Ga0114129_10005805 Ga0114129_100058054 1185
123 3300009147 Ga0114129_10015905 Ga0114129_100159052 1185
124 3300025940 Ga0207691_10014580 Ga0207691_100145803 1185
125 3300027907 Ga0207428_10002778 Ga0207428_1000277811 1185
126 3300027907 Ga0207428_10003596 Ga0207428_100035968 1185
127 3300050511 nmdc:mga08y16_1767_c1 nmdc:mga08y16_1767_c1_5699_9310 1185
128 3300050512 nmdc:mga0n895_1057_c1 nmdc:mga0n895_1057_c1_673_4305 1185
129 3300005340 Ga0070689_100001901 Ga0070689_1000019013 1186
130 3300005354 Ga0070675_100001293 Ga0070675_10000129310 1186
131 3300005843 Ga0068860_100005901 Ga0068860_1000059013 1186
132 3300026035 Ga0207703_10013890 Ga0207703_100138903 1186
133 3300028381 Ga0268264_10005268 Ga0268264_100052683 1186
134 3300005290 Ga0065712_10000250 Ga0065712_100002505 1187
135 3300006844 Ga0075428_100010755 Ga0075428_1000107555 1187
136 3300050507 nmdc:mga05p37_4887_c1 nmdc:mga05p37_4887_c1_343_3945 1187
137 3300005518 Ga0070699_100027417 Ga0070699_1000274171 1188
138 3300005549 Ga0070704_100003121 Ga0070704_1000031211 1188
139 3300005618 Ga0068864_100021222 Ga0068864_1000212222 1188
140 3300032004 Ga0307414_10006397 Ga0307414_100063973 1188
141 3300005334 Ga0068869_100009467 Ga0068869_1000094673 1189
142 3300005338 Ga0068868_100002633 Ga0068868_1000026336 1189
143 3300005340 Ga0070689_100017530 Ga0070689_1000175302 1189
144 3300005356 Ga0070674_100000465 Ga0070674_1000004658 1189
145 3300005543 Ga0070672_100007732 Ga0070672_1000077323 1189
146 3300005548 Ga0070665_100031848 Ga0070665_1000318482 1189
147 3300005843 Ga0068860_100003745 Ga0068860_1000037459 1189
148 3300005844 Ga0068862_100001017 Ga0068862_10000101721 1189
149 3300006844 Ga0075428_100031330 Ga0075428_1000313302 1189
150 3300006846 Ga0075430_100000845 Ga0075430_1000008459 1189
151 3300006871 Ga0075434_100000384 Ga0075434_10000038410 1189
152 3300006880 Ga0075429_100005834 Ga0075429_1000058344 1189
153 3300006880 Ga0075429_100024797 Ga0075429_1000247972 1189
154 3300009553 Ga0105249_10001377 Ga0105249_1000137715 1189
155 3300014745 Ga0157377_10005480 Ga0157377_100054802 1189
156 3300017792 Ga0163161_10008995 Ga0163161_100089953 1189
157 3300025315 Ga0207697_10000103 Ga0207697_1000010316 1189
158 3300025893 Ga0207682_10003159 Ga0207682_100031593 1189
159 3300025901 Ga0207688_10000113 Ga0207688_1000011327 1189
160 3300025907 Ga0207645_10000210 Ga0207645_1000021017 1189
161 3300025908 Ga0207643_10000149 Ga0207643_100001496 1189
162 3300025918 Ga0207662_10002378 Ga0207662_100023782 1189
163 3300025940 Ga0207691_10000791 Ga0207691_1000079126 1189
164 3300025942 Ga0207689_10000712 Ga0207689_100007127 1189
165 3300025945 Ga0207679_10004331 Ga0207679_100043313 1189
166 3300026118 Ga0207675_100006286 Ga0207675_1000062866 1189
167 3300027907 Ga0207428_10000512 Ga0207428_1000051212 1189
168 3300050508 nmdc:mga09592_5911_c1 nmdc:mga09592_5911_c1_3257_6850 1189
169 3300050510 nmdc:mga06r32_694_c1 nmdc:mga06r32_694_c1_13590_17183 1189
170 3300050511 nmdc:mga08y16_15992_c1 nmdc:mga08y16_15992_c1_3533_7126 1189
171 3300006846 Ga0075430_100013897 Ga0075430_1000138972 1190
172 3300005295 Ga0065707_10083737 Ga0065707_100837373 1192
173 3300005354 Ga0070675_100013092 Ga0070675_1000130923 1192
174 3300006844 Ga0075428_100015792 Ga0075428_1000157922 1192
175 3300009094 Ga0111539_10001720 Ga0111539_100017205 1192
176 3300025940 Ga0207691_10004444 Ga0207691_100044444 1192
177 3300027907 Ga0207428_10001587 Ga0207428_100015873 1192
178 3300050511 nmdc:mga08y16_9616_c1 nmdc:mga08y16_9616_c1_3621_7289 1192
179 3300005518 Ga0070699_100001626 Ga0070699_10000162617 1194
180 3300025923 Ga0207681_10015337 Ga0207681_100153371 1195
181 3300025933 Ga0207706_10018156 Ga0207706_100181563 1195
182 3300031901 Ga0307406_10004783 Ga0307406_100047833 1196
183 3300005289 Ga0065704_10004553 Ga0065704_100045532 1201

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17657

DNA_pol3_finger

Bacterial DNA polymerase III alpha subunit finger domain

568

733

0.99

PF14579

HHH_6

Helix-hairpin-helix motif

806

893

0.97

PF07733

DNA_pol3_alpha

Bacterial DNA polymerase III alpha NTPase domain

296

565

0.96

PF02811

PHP

PHP domain

6

178

0.95

PF01336

tRNA_anti-codon

OB-fold nucleic acid binding domain

1023

1100

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1quq-assembly3.cif.gz_A complex of replication protein a subunits rpa14 and rpa32 0.851 1035 1112
1l1o-assembly1.cif.gz_E structure of the human replication protein a (rpa) trimerization core 0.8413 1035 1112
1ue7-assembly1.cif.gz_B-2 crystal structure of the single-stranded dna-binding protein from mycobacterium tuberculosis 0.8319 1034 1112
3eiv-assembly2.cif.gz_A crystal structure of single-stranded dna-binding protein from streptomyces coelicolor 0.8244 1034 1111
3kdf-assembly3.cif.gz_D x-ray crystal structure of the human replication protein a complex from wheat germ cell free expression 0.8232 1035 1112
ID Description Score Start End Superfamily
af_P10443_714_886_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9558 712 884 1.10.150.870
af_P9WNT7_736_912_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9477 707 884 1.10.150.870
af_P10443_714_886_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9452 712 884 1.10.150.870
af_P9WNT7_736_912_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9375 707 884 1.10.150.870
af_Q9F1K0_663_817_1.10.150.870 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9294 728 881 1.10.150.870
ID Description Score Start End GO Terms
AF-A0A0G1VHW1-F1-model_v4 Polymerase III DnaE protein 0.9697 1033 1112 GO:0003676
GO:0006260
GO:0008408
AF-K1TFD5-F1-model_v4 DNA polymerase III subunit alpha 0.9683 618 802 GO:0006260
GO:0008408
AF-A0A538JML5-F1-model_v4 DNA polymerase III alpha subunit finger domain-containing protein 0.9649 590 743 GO:0006260
GO:0008408
AF-A0A544VQ57-F1-model_v4 DNA polymerase III subunit alpha (EC 2.7.7.7) 0.9645 654 776 GO:0003887
GO:0006260
GO:0008408
AF-K1TFD5-F1-model_v4 DNA polymerase III subunit alpha 0.958 618 802 GO:0006260
GO:0008408

Feature Viewer

pLDDT pTM Quality
71.32 0.54 Medium
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Predicted Structure (AlphaFold2)

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