F280609

General Info

Members Datasets Scaffolds Average Seq Length
183 128 366 418

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10000005|Ga0070717_10000005253
Length 437
Sequence MSASDASPDVAVVGLGRVGLPLALSFADRGLRVLGIDRDGERLSAVAAGRMPFQETGTDKLIERVHRSGRLAVSERVADAARADAIVLTLGTPSFSHIEIDMRDIRSALDDLLRHLRPGHTIVLRSTIAPGTTDFVAGYLERQRGLRAGADVHVAHVPERIATGKFLAEIDTLPCIVGAVGGSESGEHVGRLFETFGAPIVQTTPVQAELAKIWANILRYTHFALPNLLMMDCEQYGANVFEVIDLINRDYPRGGIAQPGFTAGTCLRKDFTFSEERSNAPGMLLAVSRVNESVPHFLVQGIKRRSPEQTLNGRKVAVLGLAFKGDTDDERDSLAHKLIRLLERELADVAVHDPVVASPTQTLEETLHEANVVVVAANHAAFEPRATRAAVGALAAPDCLVVDPWNHLGSGQVFAFADELIPLGVEGGSGGGEAGSD

Samples

Sample ID Description Type Environment
1 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
27 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
38 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
39 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
40 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
41 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
47 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
71 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
72 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
73 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
74 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
75 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
76 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
81 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
86 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
87 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
88 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
89 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
90 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
91 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
92 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
93 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
94 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
95 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
96 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
97 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
98 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
99 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
110 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
111 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
112 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
113 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
117 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
118 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
119 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
120 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
121 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
122 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
123 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
124 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
125 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
126 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
127 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
128 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.45
Metatranscriptomes 0.55
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.64
Nodule 0
Rhizoplane 8.2
Rhizosphere 87.98
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070717_10000005 3300006028 Bacteria 357819
2 JGI25406J46586_10025882 3300003203 Bacteria 2270
3 JGI25407J50210_10001794 3300003373 Bacteria 4946
4 Ga0070658_10157769 3300005327 Bacteria 1902
5 Ga0070683_100065112 3300005329 Bacteria 3393
6 Ga0068868_100063224 3300005338 Bacteria 2936
7 Ga0070692_10003687 3300005345 Bacteria 6273
8 Ga0070669_100001278 3300005353 Bacteria 18226
9 Ga0070671_100179208 3300005355 Bacteria 1794
10 Ga0070659_100000003 3300005366 Bacteria 309142
11 Ga0070659_100003484 3300005366 Bacteria 11201
12 Ga0070714_100018441 3300005435 Bacteria 5668
13 Ga0070710_10000001 3300005437 Bacteria 552187
14 Ga0070705_100001502 3300005440 Bacteria 12280
15 Ga0070681_10100933 3300005458 Bacteria 2831
16 Ga0068867_100148171 3300005459 Bacteria 1841
17 Ga0070707_100202944 3300005468 Bacteria 1933
18 Ga0070684_100067130 3300005535 Bacteria 3149
19 Ga0070684_100281912 3300005535 Bacteria 1522
20 Ga0070684_100292782 3300005535 Bacteria 1493
21 Ga0070665_100001058 3300005548 Bacteria 34437
22 Ga0070664_100135314 3300005564 Bacteria 2167
23 Ga0068866_10045063 3300005718 Bacteria 2210
24 Ga0068861_100101406 3300005719 Bacteria 2290
25 Ga0081455_10153306 3300005937 Bacteria 1774
26 Ga0081538_10000626 3300005981 Bacteria 39230
27 Ga0081538_10001022 3300005981 Bacteria 29868
28 Ga0081538_10006145 3300005981 Bacteria 10652
29 Ga0081538_10022052 3300005981 Bacteria 4625
30 Ga0081538_10068290 3300005981 Bacteria 1977
31 Ga0081540_1004044 3300005983 Bacteria 11357
32 Ga0081540_1034247 3300005983 Bacteria 2743
33 Ga0081539_10001368 3300005985 Bacteria 42269
34 Ga0081539_10001690 3300005985 Bacteria 35584
35 Ga0081539_10004099 3300005985 Bacteria 16630
36 Ga0081539_10070032 3300005985 Bacteria 1884
37 Ga0070716_100093640 3300006173 Bacteria 1824
38 Ga0070712_100071879 3300006175 Bacteria 2477
39 Ga0075428_100017764 3300006844 Bacteria 7859
40 Ga0075428_100080442 3300006844 Bacteria 3556
41 Ga0075430_100000494 3300006846 Bacteria 29636
42 Ga0075430_100005437 3300006846 Bacteria 10764
43 Ga0075430_100019824 3300006846 Bacteria 5720
44 Ga0075431_100016799 3300006847 Bacteria 7434
45 Ga0075433_10070935 3300006852 Bacteria 3062
46 Ga0075435_100226769 3300007076 Bacteria 1587
47 Ga0105240_10121895 3300009093 Bacteria 3139
48 Ga0111539_10098104 3300009094 Bacteria 3442
49 Ga0111539_10238592 3300009094 Bacteria 2116
50 Ga0114129_10004404 3300009147 Bacteria 19866
51 Ga0114129_10075961 3300009147 Bacteria 4678
52 Ga0114129_10265035 3300009147 Bacteria 2301
53 Ga0114129_10353179 3300009147 Bacteria 1947
54 Ga0105237_10216200 3300009545 Bacteria 1917
55 Ga0105238_10019789 3300009551 Bacteria 6852
56 Ga0105249_10144256 3300009553 Bacteria 2286
57 Ga0157370_10252608 3300013104 Bacteria 1631
58 Ga0157369_10140272 3300013105 Bacteria 2558
59 Ga0163162_10226259 3300013306 Bacteria 2000
60 Ga0157372_10163189 3300013307 Bacteria 2575
61 Ga0163163_10110468 3300014325 Bacteria 2777
62 Ga0163163_10122381 3300014325 Bacteria 2636
63 Ga0157379_10077522 3300014968 Bacteria 2976
64 Ga0206353_11883573 3300020082 Bacteria 2038
65 Ga0207426_1004002 3300025302 Bacteria 7479
66 Ga0207692_10000007 3300025898 Bacteria 233250
67 Ga0207688_10074205 3300025901 Bacteria 1934
68 Ga0207688_10096338 3300025901 Bacteria 1704
69 Ga0207705_10131130 3300025909 Bacteria 1866
70 Ga0207671_10135989 3300025914 Bacteria 1890
71 Ga0207693_10040809 3300025915 Bacteria 3655
72 Ga0207693_10088017 3300025915 Bacteria 2434
73 Ga0207657_10029911 3300025919 Bacteria 4950
74 Ga0207649_10069232 3300025920 Bacteria 2246
75 Ga0207664_10000035 3300025929 Bacteria 173780
76 Ga0207664_10001837 3300025929 Bacteria 14000
77 Ga0207690_10000021 3300025932 Bacteria 217710
78 Ga0207709_10099416 3300025935 Bacteria 1920
79 Ga0207669_10095009 3300025937 Bacteria 1953
80 Ga0207691_10227620 3300025940 Bacteria 1615
81 Ga0207661_10007592 3300025944 Bacteria 7711
82 Ga0207661_10185185 3300025944 Bacteria 1821
83 Ga0207679_10110359 3300025945 Bacteria 2170
84 Ga0207639_10012443 3300026041 Bacteria 5926
85 Ga0207708_10076810 3300026075 Bacteria 2562
86 Ga0207708_10214017 3300026075 Bacteria 1541
87 Ga0207641_10255106 3300026088 Bacteria 1640
88 Ga0207648_10105376 3300026089 Bacteria 2473
89 Ga0207648_10159778 3300026089 Bacteria 1990
90 Ga0207674_10147689 3300026116 Bacteria 2309
91 Ga0207675_100192951 3300026118 Bacteria 1954
92 Ga0207675_100227527 3300026118 Bacteria 1798
93 Ga0207675_100248575 3300026118 Bacteria 1721
94 Ga0207683_10230262 3300026121 Bacteria 1690
95 Ga0207428_10131706 3300027907 Bacteria 1913
96 Ga0207428_10187262 3300027907 Bacteria 1561
97 Ga0268266_10026642 3300028379 Bacteria 4918
98 Ga0265326_10000071 3300028558 Bacteria 57770
99 Ga0265319_1000094 3300028563 Bacteria 68209
100 Ga0265319_1004131 3300028563 Bacteria 7299
101 Ga0265319_1036955 3300028563 Bacteria 1667
102 Ga0265334_10000251 3300028573 Bacteria 30815
103 Ga0265318_10002678 3300028577 Bacteria 9351
104 Ga0265336_10000019 3300028666 Bacteria 218636
105 Ga0265338_10000413 3300028800 Bacteria 76430
106 Ga0265338_10003638 3300028800 Bacteria 21473
107 Ga0265340_10000004 3300031247 Bacteria 218649
108 Ga0265327_10001901 3300031251 Bacteria 24126
109 Ga0265316_10014723 3300031344 Bacteria 6867
110 Ga0307410_10097165 3300031852 Bacteria 2104
111 Ga0307406_10072609 3300031901 Bacteria 2260
112 Ga0307406_10132358 3300031901 Bacteria 1753
113 Ga0307415_100066582 3300032126 Bacteria 2514
114 Ga0395898_0080768 3300037466 Bacteria 3136
115 Ga0395905_0304570 3300037471 Bacteria 1481
116 Ga0395901_0072366 3300038443 Bacteria 3594
117 Ga0466965_0032126 3300044683 Bacteria 2564
118 Ga0466963_0023672 3300044694 Bacteria 3902
119 Ga0466963_0034341 3300044694 Bacteria 3299
120 Ga0466963_0040156 3300044694 Bacteria 3067
121 Ga0466970_0091617 3300044765 Bacteria 1650
122 Ga0466970_0163362 3300044765 Bacteria 1232
123 Ga0466960_0000002 3300044901 Bacteria 103573
124 Ga0466960_0031629 3300044901 Bacteria 2444
125 Ga0466960_0067477 3300044901 Bacteria 1772
126 Ga0466959_0032481 3300045049 Bacteria 3864
127 Ga0466958_0111333 3300045836 Bacteria 1709
128 Ga0466967_0004244 3300045976 Bacteria 9621
129 Ga0466967_0007259 3300045976 Bacteria 7971
130 Ga0466967_0013859 3300045976 Bacteria 6251
131 Ga0466967_0020413 3300045976 Bacteria 5355
132 Ga0466967_0031820 3300045976 Bacteria 4447
133 Ga0466967_0033103 3300045976 Bacteria 4373
134 Ga0466967_0072811 3300045976 Bacteria 3081
135 Ga0466967_0098424 3300045976 Bacteria 2671
136 Ga0466967_0451917 3300045976 Bacteria 1256
137 Ga0495650_0000012 3300046471 Bacteria 613144
138 Ga0495664_0000133 3300046477 Bacteria 37867
139 Ga0495596_0022006 3300046500 Bacteria 2598
140 Ga0495618_0070069 3300046514 Bacteria 2230
141 Ga0495620_0055522 3300046515 Bacteria 1669
142 Ga0495645_0005272 3300046543 Bacteria 8854
143 Ga0495600_0049228 3300046809 Bacteria 2750
144 Ga0495672_0038880 3300047320 Bacteria 2898
145 Ga0496102_0000091 3300048905 Bacteria 127153
146 Ga0496103_0000665 3300048906 Bacteria 25877
147 Ga0496104_0412670 3300048907 Bacteria 1262
148 Ga0496106_0074997 3300048909 Bacteria 2590
149 Ga0496109_0074740 3300048912 Bacteria 3115
150 Ga0496109_0075883 3300048912 Bacteria 3091
151 Ga0496110_0032673 3300048913 Bacteria 4497
152 Ga0496110_0110606 3300048913 Bacteria 2469
153 Ga0496110_0340645 3300048913 Bacteria 1366
154 Ga0496111_0123161 3300048914 Bacteria 1916
155 Ga0496112_0022875 3300048915 Bacteria 5962
156 Ga0496113_0002071 3300048916 Bacteria 11540
157 Ga0496113_0044633 3300048916 Bacteria 3285
158 Ga0496113_0069338 3300048916 Bacteria 2678
159 Ga0496115_0174705 3300048918 Bacteria 1776
160 Ga0496119_0062342 3300048922 Bacteria 2222
161 Ga0496121_0001082 3300048924 Bacteria 48100
162 Ga0496121_0010085 3300048924 Bacteria 10720
163 Ga0496124_0125335 3300048927 Bacteria 2047
164 Ga0501034_0079978 3300049571 Bacteria 3272
165 Ga0501036_0111039 3300049572 Bacteria 2317
166 Ga0501072_0103300 3300049588 Bacteria 2265
167 Ga0501075_0033225 3300049591 Bacteria 3838
168 Ga0501076_0075267 3300049592 Bacteria 2706
169 Ga0501076_0081073 3300049592 Bacteria 2605
170 Ga0501076_0251375 3300049592 Bacteria 1447
171 Ga0501081_0030620 3300049743 Bacteria 3644
172 nmdc:mga05p37_160179_c1 3300050507 Bacteria 2749
173 nmdc:mga09592_61632_c1 3300050508 Bacteria 3173
174 nmdc:mga0qj67_477_c1 3300050509 Bacteria 27359
175 nmdc:mga0qj67_69788_c1 3300050509 Bacteria 2803
176 nmdc:mga0qj67_7335_c1 3300050509 Bacteria 8150
177 nmdc:mga06r32_98909_c1 3300050510 Bacteria 2861
178 nmdc:mga0rr50_252553_c1 3300050513 Bacteria 1465
179 nmdc:mga0a205_78343_c1 3300050515 Bacteria 3193
180 Ga0500614_017366 3300053123 Bacteria 1625
181 Ga0500616_0004753 3300053153 Bacteria 9546
182 Ga0501082_0239451 3300060353 Bacteria 1579
183 Ga0530510_0060008 3300061734 Bacteria 2752
184 Ga0070717_10000005
185 JGI25406J46586_10025882
186 JGI25407J50210_10001794
187 Ga0070658_10157769
188 Ga0070683_100065112
189 Ga0068868_100063224
190 Ga0070692_10003687
191 Ga0070669_100001278
192 Ga0070671_100179208
193 Ga0070659_100000003
194 Ga0070659_100003484
195 Ga0070714_100018441
196 Ga0070710_10000001
197 Ga0070705_100001502
198 Ga0070681_10100933
199 Ga0068867_100148171
200 Ga0070707_100202944
201 Ga0070684_100067130
202 Ga0070684_100281912
203 Ga0070684_100292782
204 Ga0070665_100001058
205 Ga0070664_100135314
206 Ga0068866_10045063
207 Ga0068861_100101406
208 Ga0081455_10153306
209 Ga0081538_10000626
210 Ga0081538_10001022
211 Ga0081538_10006145
212 Ga0081538_10022052
213 Ga0081538_10068290
214 Ga0081540_1004044
215 Ga0081540_1034247
216 Ga0081539_10001368
217 Ga0081539_10001690
218 Ga0081539_10004099
219 Ga0081539_10070032
220 Ga0070716_100093640
221 Ga0070712_100071879
222 Ga0075428_100017764
223 Ga0075428_100080442
224 Ga0075430_100000494
225 Ga0075430_100005437
226 Ga0075430_100019824
227 Ga0075431_100016799
228 Ga0075433_10070935
229 Ga0075435_100226769
230 Ga0105240_10121895
231 Ga0111539_10098104
232 Ga0111539_10238592
233 Ga0114129_10004404
234 Ga0114129_10075961
235 Ga0114129_10265035
236 Ga0114129_10353179
237 Ga0105237_10216200
238 Ga0105238_10019789
239 Ga0105249_10144256
240 Ga0157370_10252608
241 Ga0157369_10140272
242 Ga0163162_10226259
243 Ga0157372_10163189
244 Ga0163163_10110468
245 Ga0163163_10122381
246 Ga0157379_10077522
247 Ga0206353_11883573
248 Ga0207426_1004002
249 Ga0207692_10000007
250 Ga0207688_10074205
251 Ga0207688_10096338
252 Ga0207705_10131130
253 Ga0207671_10135989
254 Ga0207693_10040809
255 Ga0207693_10088017
256 Ga0207657_10029911
257 Ga0207649_10069232
258 Ga0207664_10000035
259 Ga0207664_10001837
260 Ga0207690_10000021
261 Ga0207709_10099416
262 Ga0207669_10095009
263 Ga0207691_10227620
264 Ga0207661_10007592
265 Ga0207661_10185185
266 Ga0207679_10110359
267 Ga0207639_10012443
268 Ga0207708_10076810
269 Ga0207708_10214017
270 Ga0207641_10255106
271 Ga0207648_10105376
272 Ga0207648_10159778
273 Ga0207674_10147689
274 Ga0207675_100192951
275 Ga0207675_100227527
276 Ga0207675_100248575
277 Ga0207683_10230262
278 Ga0207428_10131706
279 Ga0207428_10187262
280 Ga0268266_10026642
281 Ga0265326_10000071
282 Ga0265319_1000094
283 Ga0265319_1004131
284 Ga0265319_1036955
285 Ga0265334_10000251
286 Ga0265318_10002678
287 Ga0265336_10000019
288 Ga0265338_10000413
289 Ga0265338_10003638
290 Ga0265340_10000004
291 Ga0265327_10001901
292 Ga0265316_10014723
293 Ga0307410_10097165
294 Ga0307406_10072609
295 Ga0307406_10132358
296 Ga0307415_100066582
297 Ga0395898_0080768
298 Ga0395905_0304570
299 Ga0395901_0072366
300 Ga0466965_0032126
301 Ga0466963_0023672
302 Ga0466963_0034341
303 Ga0466963_0040156
304 Ga0466970_0091617
305 Ga0466970_0163362
306 Ga0466960_0000002
307 Ga0466960_0031629
308 Ga0466960_0067477
309 Ga0466959_0032481
310 Ga0466958_0111333
311 Ga0466967_0004244
312 Ga0466967_0007259
313 Ga0466967_0013859
314 Ga0466967_0020413
315 Ga0466967_0031820
316 Ga0466967_0033103
317 Ga0466967_0072811
318 Ga0466967_0098424
319 Ga0466967_0451917
320 Ga0495650_0000012
321 Ga0495664_0000133
322 Ga0495596_0022006
323 Ga0495618_0070069
324 Ga0495620_0055522
325 Ga0495645_0005272
326 Ga0495600_0049228
327 Ga0495672_0038880
328 Ga0496102_0000091
329 Ga0496103_0000665
330 Ga0496104_0412670
331 Ga0496106_0074997
332 Ga0496109_0074740
333 Ga0496109_0075883
334 Ga0496110_0032673
335 Ga0496110_0110606
336 Ga0496110_0340645
337 Ga0496111_0123161
338 Ga0496112_0022875
339 Ga0496113_0002071
340 Ga0496113_0044633
341 Ga0496113_0069338
342 Ga0496115_0174705
343 Ga0496119_0062342
344 Ga0496121_0001082
345 Ga0496121_0010085
346 Ga0496124_0125335
347 Ga0501034_0079978
348 Ga0501036_0111039
349 Ga0501072_0103300
350 Ga0501075_0033225
351 Ga0501076_0075267
352 Ga0501076_0081073
353 Ga0501076_0251375
354 Ga0501081_0030620
355 nmdc:mga05p37_160179_c1
356 nmdc:mga09592_61632_c1
357 nmdc:mga0qj67_477_c1
358 nmdc:mga0qj67_69788_c1
359 nmdc:mga0qj67_7335_c1
360 nmdc:mga06r32_98909_c1
361 nmdc:mga0rr50_252553_c1
362 nmdc:mga0a205_78343_c1
363 Ga0500614_017366
364 Ga0500616_0004753
365 Ga0501082_0239451
366 Ga0530510_0060008

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03721

UDPG_MGDP_dh_N

UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain

8

192

0.91

PF00984

UDPG_MGDP_dh

UDP-glucose/GDP-mannose dehydrogenase family, central domain

206

293

0.84

PF03720

UDPG_MGDP_dh_C

UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain

317

410

0.83

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

9

204

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ae4-assembly1.cif.gz_A crystal structure of porcine heart mitochondrial complex ii bound with 2-iodo-n-methyl-benzamide 0.9766 2 30
4qi6-assembly1.cif.gz_A cellobiose dehydrogenase from myriococcum thermophilum, mtcdh 0.9745 2 32
7e7h-assembly2.cif.gz_B crystal structure of a pseudooxynicotine amine oxidase pnao from pseudomonas putida s16 0.9725 2 32
3cp2-assembly1.cif.gz_A-2 crystal structure of gida from e. coli 0.9684 2 33
7u6l-assembly1.cif.gz_A pseudooxynicotine amine oxidase 0.968 2 32
ID Description Score Start End Superfamily
af_Q54US8_49_419_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9798 2 32 3.50.50.60
af_Q54BK7_6_401_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9732 1 33 3.50.50.60
af_P75728_4_256_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9695 2 32 3.50.50.60
af_P37631_5_390_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9674 3 34 3.40.50.720
4cnjC01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9642 2 34 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A7V8ZJK6-F1-model_v4 Nucleotide sugar dehydrogenase 0.9815 2 149 GO:0000271
GO:0016616
GO:0016628
GO:0051287
AF-A0A5C7WAK1-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase N-terminal domain-containing protein 0.9434 3 86 GO:0000271
GO:0016616
GO:0016628
GO:0051287
AF-X1F787-F1-model_v4 UDP-glucose/GDP-mannose dehydrogenase N-terminal domain-containing protein 0.9379 3 242 GO:0000271
GO:0016616
GO:0016628
GO:0051287
AF-A0A7V8ZJK6-F1-model_v4 Nucleotide sugar dehydrogenase 0.9378 2 149 GO:0000271
GO:0016616
GO:0016628
GO:0051287
AF-A0A662NVG2-F1-model_v4 deleted 0.9333 3 238

Map