F280806

General Info

Members Datasets Scaffolds Average Seq Length
183 136 169 269

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10000139|Ga0105248_100001399
Length 300
Sequence MIQPAGCCNAPDRREIATRGGFRFARRHPISIFGPLCPWGFFDTMTASIAYLGLLDDEDILLDIAALELSALDHPGVDLAPYLAQLAVIEAEIEEAILARILAGRHGFSGDSQSYDAPLNTDMIRVLDRRKGLPVSLAILYVALARRIGWSADALNTPGHVLVRIGPESAPIMVDPFHDGAAVTREGLLTLLRRALGQAARYDARHVAPMANRLVLVRLLLNQATRAEAEGDGGRALTLYRRIVEVAPGNAQGWWDLARLQLSTGRIDDARTSLSAMLEVTRDSGSRAHIAAALEALAGR

Samples

Sample ID Description Type Environment
1 2582581305 Rhizorhabdus wittichii YR128 Isolate Rhizosphere
2 2599185359 Sphingomonas sp. NFR04 Isolate Rhizoplane
3 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
4 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
5 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
6 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
7 2818991466 Sphingomonas trueperi 1152a Isolate Unclassified
8 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
9 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
10 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere
11 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
12 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
13 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
16 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
17 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
18 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
35 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
42 3300012513 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510 Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
47 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
71 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
74 3300041462 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_8 MetaG Metagenome Rhizoplane
75 3300044659 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2E Metagenome Unclassified
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
78 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
79 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
80 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
81 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
82 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
83 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
84 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
85 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
86 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
87 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
88 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
89 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
90 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
91 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
92 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
93 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
94 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
95 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
96 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
97 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
98 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
99 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
100 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
101 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
102 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
103 3300049516 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_B_5_drought Metagenome Rhizosphere
104 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
105 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
110 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
111 3300049676 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_A_3_control Metagenome Rhizosphere
112 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
113 3300049685 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_B_3_control Metagenome Rhizosphere
114 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
115 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
116 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
117 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
118 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
121 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
122 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
123 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
124 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
125 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
126 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
127 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
128 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
129 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
130 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
131 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
132 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
133 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
134 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
135 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
136 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.44
Metatranscriptomes 0
Isolates 6.56

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.93
Nodule 0
Rhizoplane 6.01
Rhizosphere 68.31
Stem 0
Stem Tuber 0
Unclassified 14.75

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24749J21850_1000033 3300002076 Bacteria 25902
2 JGI24751J29686_10000046 3300002459 Bacteria 73259
3 rootH2_10259969 3300003320 Unclassified 1100
4 Ga0065707_10129638 3300005295 Bacteria 1944
5 Ga0065707_10251983 3300005295 Bacteria 1110
6 Ga0070670_100000006 3300005331 Bacteria 319420
7 Ga0070670_100119472 3300005331 Bacteria 2273
8 Ga0070666_10288458 3300005335 Bacteria 1167
9 Ga0070689_100301216 3300005340 Bacteria 1334
10 Ga0070668_100000002 3300005347 Bacteria 216333
11 Ga0070668_100065279 3300005347 Bacteria 2823
12 Ga0070669_100000102 3300005353 Bacteria 82010
13 Ga0070669_100281888 3300005353 Bacteria 1332
14 Ga0070671_100001291 3300005355 Bacteria 18778
15 Ga0070671_100105664 3300005355 Bacteria 2363
16 Ga0070667_100003424 3300005367 Bacteria 13510
17 Ga0070685_10131330 3300005466 Bacteria 1566
18 Ga0068853_100000241 3300005539 Bacteria 38447
19 Ga0070665_100277380 3300005548 Bacteria 1678
20 Ga0068857_100051548 3300005577 Bacteria 3651
21 Ga0068857_100285921 3300005577 Bacteria 1518
22 Ga0068854_100010228 3300005578 Bacteria 6079
23 Ga0068852_100095009 3300005616 Bacteria 2676
24 Ga0068852_100282265 3300005616 Bacteria 1601
25 Ga0068859_100004179 3300005617 Bacteria 14748
26 Ga0068859_100030847 3300005617 Bacteria 5380
27 Ga0068864_100000014 3300005618 Bacteria 308927
28 Ga0068864_100127409 3300005618 Bacteria 2283
29 Ga0068861_100034729 3300005719 Bacteria 3730
30 Ga0068863_100000008 3300005841 Bacteria 251996
31 Ga0068863_100000168 3300005841 Bacteria 70935
32 Ga0068862_100000007 3300005844 Bacteria 313933
33 Ga0068862_100029321 3300005844 Bacteria 4636
34 Ga0068862_100070207 3300005844 Bacteria 3024
35 Ga0075364_10129785 3300006051 Bacteria 1691
36 Ga0075436_100007781 3300006914 Bacteria 7330
37 Ga0097620_100004180 3300006931 Bacteria 14748
38 Ga0097620_100030847 3300006931 Bacteria 5380
39 Ga0075435_100140649 3300007076 Bacteria 2025
40 Ga0105251_10016653 3300009011 Bacteria 3963
41 Ga0105248_10000139 3300009177 Bacteria 84082
42 Ga0105248_10004966 3300009177 Bacteria 14697
43 Ga0105238_10182490 3300009551 Bacteria 2075
44 Ga0105148_100056 3300009978 Bacteria 17469
45 Ga0157326_1000104 3300012513 Bacteria 8680
46 Ga0157371_10040830 3300013102 Bacteria 3312
47 Ga0157369_10174695 3300013105 Bacteria 2262
48 Ga0157380_10000014 3300014326 Bacteria 130737
49 Ga0157380_10060536 3300014326 Bacteria 3026
50 Ga0163161_10069217 3300017792 Bacteria 2579
51 Ga0209147_100624 3300025229 Bacteria 19233
52 Ga0209565_1027232 3300025263 Bacteria 1139
53 Ga0207707_10252223 3300025912 Bacteria 1533
54 Ga0207652_10102060 3300025921 Bacteria 2535
55 Ga0207681_10000001 3300025923 Bacteria 1105841
56 Ga0207681_10034796 3300025923 Bacteria 3315
57 Ga0207681_10218824 3300025923 Bacteria 1472
58 Ga0207694_10093093 3300025924 Bacteria 2380
59 Ga0207650_10000023 3300025925 Bacteria 308148
60 Ga0207644_10000016 3300025931 Bacteria 179046
61 Ga0207711_10003786 3300025941 Bacteria 13015
62 Ga0207712_10294058 3300025961 Bacteria 1330
63 Ga0207668_10000105 3300025972 Bacteria 59485
64 Ga0207658_10011568 3300025986 Bacteria 6007
65 Ga0207639_10000983 3300026041 Bacteria 19409
66 Ga0207639_10169280 3300026041 Bacteria 1849
67 Ga0207702_10398396 3300026078 Bacteria 1327
68 Ga0207641_10000004 3300026088 Bacteria 481088
69 Ga0207641_10000241 3300026088 Bacteria 71027
70 Ga0207676_10000017 3300026095 Bacteria 308709
71 Ga0207674_10022702 3300026116 Bacteria 6735
72 Ga0207674_10046208 3300026116 Bacteria 4472
73 Ga0207675_100000891 3300026118 Bacteria 29831
74 Ga0207698_10210512 3300026142 Bacteria 1749
75 Ga0207698_10382162 3300026142 Bacteria 1340
76 Ga0268266_10209434 3300028379 Bacteria 1787
77 Ga0268265_10000002 3300028380 Bacteria 1035381
78 Ga0268265_10057258 3300028380 Bacteria 2970
79 Ga0307412_10003105 3300031911 Bacteria 9221
80 Ga0307412_10010268 3300031911 Bacteria 5391
81 Ga0307412_10046524 3300031911 Bacteria 2843
82 Ga0307414_10002515 3300032004 Bacteria 9619
83 Ga0373925_0241788 3300037068 Bacteria 1446
84 Ga0395905_0087918 3300037471 Bacteria 2913
85 Ga0395901_0660037 3300038443 Bacteria 1048
86 Ga0451802_0047084 3300041460 Bacteria 5860
87 Ga0451806_574197 3300041462 Bacteria 11493
88 Ga0466973_0282445 3300044659 Bacteria 1133
89 Ga0466967_0041162 3300045976 Bacteria 3982
90 Ga0466967_0373872 3300045976 Bacteria 1383
91 Ga0495638_0078886 3300046460 Bacteria 2003
92 Ga0495650_0001552 3300046471 Bacteria 21682
93 Ga0495584_0185533 3300046491 Bacteria 1057
94 Ga0495616_0000007 3300046513 Bacteria 227689
95 Ga0495637_0001154 3300046520 Bacteria 16192
96 Ga0495637_0102220 3300046520 Bacteria 1119
97 Ga0495643_0000068 3300046522 Bacteria 172115
98 Ga0495643_0017912 3300046522 Bacteria 4130
99 Ga0495648_0010223 3300046524 Bacteria 7168
100 Ga0495663_0000001 3300046525 Bacteria 595264
101 Ga0495633_0000179 3300046558 Bacteria 82201
102 Ga0495633_0000744 3300046558 Bacteria 29404
103 Ga0495633_0015937 3300046558 Bacteria 3889
104 Ga0495668_0021556 3300046616 Bacteria 3693
105 Ga0495625_0015209 3300046660 Bacteria 6104
106 Ga0495671_0000040 3300046692 Bacteria 167933
107 Ga0496102_0185439 3300048905 Bacteria 1961
108 Ga0496108_0000763 3300048911 Bacteria 25067
109 Ga0496109_0006904 3300048912 Bacteria 9578
110 Ga0496110_0383759 3300048913 Unclassified 1280
111 Ga0496111_0021625 3300048914 Bacteria 4496
112 Ga0496111_0146475 3300048914 Bacteria 1751
113 Ga0496113_0076104 3300048916 Bacteria 2563
114 Ga0496117_0079321 3300048920 Bacteria 2164
115 Ga0496121_0000624 3300048924 Bacteria 65948
116 Ga0496122_0000083 3300048925 Bacteria 208744
117 Ga0496122_0012679 3300048925 Bacteria 8351
118 Ga0496123_0000356 3300048926 Bacteria 85832
119 Ga0496124_0002343 3300048927 Bacteria 25006
120 Ga0496124_0039233 3300048927 Bacteria 4106
121 Ga0496124_0061672 3300048927 Bacteria 3142
122 Ga0496125_0009964 3300048928 Bacteria 9658
123 Ga0496125_0011078 3300048928 Bacteria 9046
124 Ga0496125_0015254 3300048928 Bacteria 7436
125 Ga0496125_0032936 3300048928 Bacteria 4595
126 Ga0496125_0042318 3300048928 Bacteria 3882
127 Ga0496126_0004017 3300048929 Bacteria 17931
128 Ga0496126_0084398 3300048929 Bacteria 2801
129 Ga0496126_0154017 3300048929 Bacteria 1968
130 Ga0501290_002226 3300049513 Bacteria 2521
131 Ga0501293_003601 3300049516 Unclassified 1205
132 Ga0501300_002547 3300049523 Bacteria 2729
133 Ga0501033_0022320 3300049570 Bacteria 4775
134 Ga0501034_0021528 3300049571 Bacteria 6570
135 Ga0501046_0117371 3300049580 Bacteria 2027
136 Ga0501047_0000277 3300049581 Bacteria 59304
137 Ga0501223_000019 3300049663 Bacteria 67346
138 Ga0501235_001485 3300049669 Bacteria 5020
139 Ga0501246_000633 3300049676 Bacteria 2574
140 Ga0501249_003076 3300049679 Bacteria 3355
141 Ga0501256_002465 3300049685 Bacteria 1471
142 Ga0501257_000350 3300049686 Bacteria 8955
143 Ga0501225_0000040 3300049705 Bacteria 43674
144 Ga0501225_0001130 3300049705 Bacteria 8359
145 Ga0501225_0008556 3300049705 Bacteria 2933
146 Ga0501080_0130348 3300049742 Bacteria 2328
147 Ga0501262_003618 3300049759 Bacteria 1778
148 Ga0501280_002209 3300049776 Bacteria 3310
149 Ga0501044_0008770 3300049823 Bacteria 11061
150 nmdc:mga00v17_117692_c1 3300050491 Bacteria 1690
151 nmdc:mga0k408_86754_c1 3300050493 Bacteria 1837
152 nmdc:mga07m45_97485_c1 3300050496 Bacteria 1687
153 nmdc:mga0n895_747233_c1 3300050512 Bacteria 971
154 nmdc:mga0rr50_161781_c1 3300050513 Bacteria 1817
155 nmdc:mga08x19_4606_c1 3300050514 Bacteria 8187
156 Ga0500643_000220 3300053087 Bacteria 53142
157 Ga0500643_001240 3300053087 Bacteria 15109
158 Ga0500562_036505 3300053108 Unclassified 1303
159 Ga0500618_002194 3300053125 Bacteria 7644
160 Ga0500642_0000724 3300053130 Bacteria 9727
161 Ga0500655_000009 3300053133 Bacteria 58281
162 Ga0500655_040570 3300053133 Bacteria 912
163 Ga0500559_0197829 3300053136 Unclassified 947
164 Ga0500568_0005009 3300053139 Bacteria 6945
165 Ga0500568_0041957 3300053139 Bacteria 1836
166 Ga0500590_003093 3300053148 Bacteria 7586
167 Ga0500622_0015111 3300053156 Bacteria 4140
168 Ga0500570_000231 3300053724 Bacteria 18423
169 Ga0500645_015203 3300053730 Bacteria 2441

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046513 Ga0495616_0000007 Ga0495616_0000007_226084_226935 222
2 3300053087 Ga0500643_000220 Ga0500643_000220_30685_31524 225
3 3300025912 Ga0207707_10252223 Ga0207707_102522231 228
4 3300012513 Ga0157326_1000104 Ga0157326_10001046 231
5 3300053730 Ga0500645_015203 Ga0500645_015203_622_1395 233
6 3300009177 Ga0105248_10004966 Ga0105248_1000496617 237
7 3300048928 Ga0496125_0032936 Ga0496125_0032936_3455_4240 237
8 3300005539 Ga0068853_100000241 Ga0068853_10000024132 239
9 3300005577 Ga0068857_100285921 Ga0068857_1002859212 239
10 3300009551 Ga0105238_10182490 Ga0105238_101824902 239
11 3300025924 Ga0207694_10093093 Ga0207694_100930932 239
12 3300026041 Ga0207639_10000983 Ga0207639_100009837 239
13 3300026078 Ga0207702_10398396 Ga0207702_103983962 239
14 3300026116 Ga0207674_10022702 Ga0207674_100227024 239
15 3300053087 Ga0500643_001240 Ga0500643_001240_2245_3030 239
16 3300049685 Ga0501256_002465 Ga0501256_002465_43_825 242
17 3300037068 Ga0373925_0241788 Ga0373925_0241788_175_984 245
18 3300046616 Ga0495668_0021556 Ga0495668_0021556_415_1224 245
19 3300049513 Ga0501290_002226 Ga0501290_002226_126_941 245
20 3300049523 Ga0501300_002547 Ga0501300_002547_902_1717 245
21 3300053125 Ga0500618_002194 Ga0500618_002194_6354_7157 245
22 3300053130 Ga0500642_0000724 Ga0500642_0000724_4832_5641 245
23 3300053133 Ga0500655_000009 Ga0500655_000009_27506_28315 245
24 3300053148 Ga0500590_003093 Ga0500590_003093_2580_3383 245
25 3300053156 Ga0500622_0015111 Ga0500622_0015111_2296_3105 245
26 3300053724 Ga0500570_000231 Ga0500570_000231_4437_5246 245
27 3300005617 Ga0068859_100030847 Ga0068859_1000308473 246
28 3300005844 Ga0068862_100070207 Ga0068862_1000702071 246
29 3300006931 Ga0097620_100030847 Ga0097620_1000308473 246
30 3300031911 Ga0307412_10003105 Ga0307412_100031053 246
31 3300046520 Ga0495637_0102220 Ga0495637_0102220_232_1041 246
32 3300046522 Ga0495643_0017912 Ga0495643_0017912_3060_3869 246
33 3300053133 Ga0500655_040570 Ga0500655_040570_36_845 246
34 3300005347 Ga0070668_100000002 Ga0070668_10000000258 247
35 3300005616 Ga0068852_100282265 Ga0068852_1002822651 247
36 3300013102 Ga0157371_10040830 Ga0157371_100408304 247
37 3300013105 Ga0157369_10174695 Ga0157369_101746952 247
38 3300025972 Ga0207668_10000105 Ga0207668_1000010564 247
39 3300026142 Ga0207698_10210512 Ga0207698_102105123 247
40 3300049516 Ga0501293_003601 Ga0501293_003601_50_865 247
41 3300049686 Ga0501257_000350 Ga0501257_000350_7125_7940 247
42 3300049776 Ga0501280_002209 Ga0501280_002209_1468_2283 247
43 3300046460 Ga0495638_0078886 Ga0495638_0078886_370_1152 248
44 3300053136 Ga0500559_0197829 Ga0500559_0197829_101_913 248
45 3300006051 Ga0075364_10129785 Ga0075364_101297852 249
46 3300049705 Ga0501225_0001130 Ga0501225_0001130_2695_3510 249
47 3300050491 nmdc:mga00v17_117692_c1 nmdc:mga00v17_117692_c1_819_1628 249
48 3300050496 nmdc:mga07m45_97485_c1 nmdc:mga07m45_97485_c1_435_1244 249
49 iso_pu_bacteria 2937843397 2937844183 249
50 iso_pu_bacteria 3005409236 3005414853 249
51 iso_pu_bacteria 2848297114 2848299195 250
52 3300005355 Ga0070671_100001291 Ga0070671_1000012913 251
53 3300005841 Ga0068863_100000008 Ga0068863_10000000865 251
54 3300005844 Ga0068862_100029321 Ga0068862_1000293213 251
55 3300025931 Ga0207644_10000016 Ga0207644_10000016137 251
56 3300026088 Ga0207641_10000004 Ga0207641_10000004109 251
57 3300028380 Ga0268265_10057258 Ga0268265_100572582 251
58 3300048928 Ga0496125_0042318 Ga0496125_0042318_2518_3312 252
59 iso_pu_bacteria 2643221541 2643730628 252
60 iso_pu_bacteria 2643221605 2644037837 252
61 iso_pu_bacteria 2643221606 2644043797 252
62 iso_pu_bacteria 2643221671 2644393956 252
63 3300003320 rootH2_10259969 rootH2_102599691 253
64 3300006914 Ga0075436_100007781 Ga0075436_1000077818 253
65 3300007076 Ga0075435_100140649 Ga0075435_1001406492 253
66 3300025921 Ga0207652_10102060 Ga0207652_101020602 253
67 3300032004 Ga0307414_10002515 Ga0307414_100025153 253
68 3300046660 Ga0495625_0015209 Ga0495625_0015209_1247_2044 253
69 3300049570 Ga0501033_0022320 Ga0501033_0022320_3491_4288 253
70 3300049571 Ga0501034_0021528 Ga0501034_0021528_2375_3172 253
71 3300049759 Ga0501262_003618 Ga0501262_003618_492_1289 253
72 3300049823 Ga0501044_0008770 Ga0501044_0008770_7088_7885 253
73 3300005295 Ga0065707_10129638 Ga0065707_101296382 254
74 3300005340 Ga0070689_100301216 Ga0070689_1003012161 254
75 3300048925 Ga0496122_0000083 Ga0496122_0000083_79936_80736 254
76 3300048926 Ga0496123_0000356 Ga0496123_0000356_5088_5888 254
77 3300048929 Ga0496126_0154017 Ga0496126_0154017_859_1659 254
78 3300005841 Ga0068863_100000168 Ga0068863_10000016824 255
79 3300026088 Ga0207641_10000241 Ga0207641_1000024152 255
80 3300037471 Ga0395905_0087918 Ga0395905_0087918_1397_2215 255
81 3300038443 Ga0395901_0660037 Ga0395901_0660037_163_981 255
82 3300045976 Ga0466967_0041162 Ga0466967_0041162_728_1546 255
83 3300045976 Ga0466967_0373872 Ga0466967_0373872_539_1357 255
84 3300046471 Ga0495650_0001552 Ga0495650_0001552_15976_16785 255
85 3300048925 Ga0496122_0000083 Ga0496122_0000083_51703_52554 255
86 3300048926 Ga0496123_0000356 Ga0496123_0000356_33270_34121 255
87 3300048929 Ga0496126_0084398 Ga0496126_0084398_93_944 255
88 3300049742 Ga0501080_0130348 Ga0501080_0130348_391_1203 255
89 3300050512 nmdc:mga0n895_747233_c1 nmdc:mga0n895_747233_c1_27_845 255
90 3300050513 nmdc:mga0rr50_161781_c1 nmdc:mga0rr50_161781_c1_512_1330 255
91 3300050514 nmdc:mga08x19_4606_c1 nmdc:mga08x19_4606_c1_4733_5551 255
92 3300053139 Ga0500568_0005009 Ga0500568_0005009_2762_3628 255
93 3300053139 Ga0500568_0041957 Ga0500568_0041957_296_1117 255
94 iso_pu_bacteria 2582581305 2585262715 255
95 3300002076 JGI24749J21850_1000033 JGI24749J21850_10000335 256
96 3300002459 JGI24751J29686_10000046 JGI24751J29686_1000004616 256
97 3300005295 Ga0065707_10251983 Ga0065707_102519831 256
98 3300005331 Ga0070670_100000006 Ga0070670_10000000658 256
99 3300005331 Ga0070670_100119472 Ga0070670_1001194721 256
100 3300005335 Ga0070666_10288458 Ga0070666_102884581 256
101 3300005347 Ga0070668_100065279 Ga0070668_1000652791 256
102 3300005353 Ga0070669_100000102 Ga0070669_10000010224 256
103 3300005353 Ga0070669_100281888 Ga0070669_1002818882 256
104 3300005355 Ga0070671_100105664 Ga0070671_1001056642 256
105 3300005367 Ga0070667_100003424 Ga0070667_10000342411 256
106 3300005466 Ga0070685_10131330 Ga0070685_101313302 256
107 3300005548 Ga0070665_100277380 Ga0070665_1002773802 256
108 3300005577 Ga0068857_100051548 Ga0068857_1000515484 256
109 3300005578 Ga0068854_100010228 Ga0068854_1000102285 256
110 3300005616 Ga0068852_100095009 Ga0068852_1000950093 256
111 3300005617 Ga0068859_100004179 Ga0068859_1000041798 256
112 3300005618 Ga0068864_100000014 Ga0068864_100000014257 256
113 3300005618 Ga0068864_100127409 Ga0068864_1001274092 256
114 3300005719 Ga0068861_100034729 Ga0068861_1000347294 256
115 3300005844 Ga0068862_100000007 Ga0068862_10000000746 256
116 3300006931 Ga0097620_100004180 Ga0097620_1000041808 256
117 3300009011 Ga0105251_10016653 Ga0105251_100166534 256
118 3300009177 Ga0105248_10000139 Ga0105248_100001399 256
119 3300009978 Ga0105148_100056 Ga0105148_1000563 256
120 3300014326 Ga0157380_10000014 Ga0157380_1000001432 256
121 3300014326 Ga0157380_10060536 Ga0157380_100605364 256
122 3300017792 Ga0163161_10069217 Ga0163161_100692172 256
123 3300025229 Ga0209147_100624 Ga0209147_10062412 256
124 3300025263 Ga0209565_1027232 Ga0209565_10272322 256
125 3300025923 Ga0207681_10000001 Ga0207681_10000001251 256
126 3300025923 Ga0207681_10034796 Ga0207681_100347964 256
127 3300025923 Ga0207681_10218824 Ga0207681_102188241 256
128 3300025925 Ga0207650_10000023 Ga0207650_10000023253 256
129 3300025941 Ga0207711_10003786 Ga0207711_1000378611 256
130 3300025961 Ga0207712_10294058 Ga0207712_102940581 256
131 3300025986 Ga0207658_10011568 Ga0207658_100115682 256
132 3300026041 Ga0207639_10169280 Ga0207639_101692802 256
133 3300026095 Ga0207676_10000017 Ga0207676_10000017255 256
134 3300026116 Ga0207674_10046208 Ga0207674_100462083 256
135 3300026118 Ga0207675_100000891 Ga0207675_10000089117 256
136 3300026142 Ga0207698_10382162 Ga0207698_103821622 256
137 3300028379 Ga0268266_10209434 Ga0268266_102094342 256
138 3300028380 Ga0268265_10000002 Ga0268265_10000002256 256
139 3300031911 Ga0307412_10010268 Ga0307412_100102686 256
140 3300031911 Ga0307412_10046524 Ga0307412_100465243 256
141 3300041460 Ga0451802_0047084 Ga0451802_0047084_3094_3906 256
142 3300041462 Ga0451806_574197 Ga0451806_574197_6823_7635 256
143 3300044659 Ga0466973_0282445 Ga0466973_0282445_308_1114 256
144 3300046491 Ga0495584_0185533 Ga0495584_0185533_67_900 256
145 3300046520 Ga0495637_0001154 Ga0495637_0001154_2658_3491 256
146 3300046522 Ga0495643_0000068 Ga0495643_0000068_106209_107042 256
147 3300046524 Ga0495648_0010223 Ga0495648_0010223_6230_7063 256
148 3300046525 Ga0495663_0000001 Ga0495663_0000001_512442_513275 256
149 3300046558 Ga0495633_0000179 Ga0495633_0000179_9897_10730 256
150 3300046558 Ga0495633_0000744 Ga0495633_0000744_26540_27373 256
151 3300046558 Ga0495633_0015937 Ga0495633_0015937_2404_3237 256
152 3300046692 Ga0495671_0000040 Ga0495671_0000040_102027_102860 256
153 3300048905 Ga0496102_0185439 Ga0496102_0185439_744_1574 256
154 3300048911 Ga0496108_0000763 Ga0496108_0000763_8621_9454 256
155 3300048912 Ga0496109_0006904 Ga0496109_0006904_1448_2278 256
156 3300048913 Ga0496110_0383759 Ga0496110_0383759_69_899 256
157 3300048914 Ga0496111_0021625 Ga0496111_0021625_322_1152 256
158 3300048914 Ga0496111_0146475 Ga0496111_0146475_249_1082 256
159 3300048916 Ga0496113_0076104 Ga0496113_0076104_1266_2096 256
160 3300048920 Ga0496117_0079321 Ga0496117_0079321_301_1134 256
161 3300048924 Ga0496121_0000624 Ga0496121_0000624_17288_18121 256
162 3300048925 Ga0496122_0012679 Ga0496122_0012679_1015_1851 256
163 3300048927 Ga0496124_0002343 Ga0496124_0002343_5773_6597 256
164 3300048927 Ga0496124_0039233 Ga0496124_0039233_2946_3782 256
165 3300048927 Ga0496124_0061672 Ga0496124_0061672_952_1776 256
166 3300048928 Ga0496125_0009964 Ga0496125_0009964_5524_6357 256
167 3300048928 Ga0496125_0011078 Ga0496125_0011078_410_1240 256
168 3300048928 Ga0496125_0015254 Ga0496125_0015254_1537_2373 256
169 3300048929 Ga0496126_0004017 Ga0496126_0004017_10316_11149 256
170 3300049580 Ga0501046_0117371 Ga0501046_0117371_78_884 256
171 3300049581 Ga0501047_0000277 Ga0501047_0000277_38516_39322 256
172 3300049663 Ga0501223_000019 Ga0501223_000019_22967_23791 256
173 3300049669 Ga0501235_001485 Ga0501235_001485_2692_3540 256
174 3300049676 Ga0501246_000633 Ga0501246_000633_492_1316 256
175 3300049679 Ga0501249_003076 Ga0501249_003076_2497_3303 256
176 3300049705 Ga0501225_0000040 Ga0501225_0000040_19528_20352 256
177 3300049705 Ga0501225_0008556 Ga0501225_0008556_1071_1919 256
178 3300050493 nmdc:mga0k408_86754_c1 nmdc:mga0k408_86754_c1_751_1560 256
179 3300053108 Ga0500562_036505 Ga0500562_036505_163_969 256
180 iso_pu_bacteria 2599185359 2600224724 256
181 iso_pu_bacteria 2599185359 2600228533 256
182 iso_pu_bacteria 2818991466 2819714993 256
183 iso_pu_bacteria 2928968154 2928968891 256

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13369

Transglut_core2

Transglutaminase-like superfamily

69

221

0.93

PF14559

TPR_19

Tetratricopeptide repeat

227

297

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zbp-assembly1.cif.gz_A x-ray crystal structure of protein vpa1032 from vibrio parahaemolyticus. northeast structural genomics consortium target vpr44 0.9636 179 236
4uqy-assembly1.cif.gz_A coevolution of the atpase clpv, the tssb-tssc sheath and the accessory hsie protein distinguishes two type vi secretion classes 0.9223 180 253
4cgq-assembly1.cif.gz_A full length tah1 bound to hsp90 peptide srmeevd 0.9089 173 240
1wm5-assembly1.cif.gz_A crystal structure of the n-terminal tpr domain (1-203) of p67phox 0.9008 173 236
6i7k-assembly1.cif.gz_A crystal structure of monomeric ficd mutant l258d complexed with mgatp 0.8886 173 237
ID Description Score Start End Superfamily
af_B7ZYT3_113_297_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9594 173 237 1.25.40.10
af_A0A1D6GDC0_120_305_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9594 174 237 1.25.40.10
af_Q5CZ52_184_270_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9419 173 236 1.25.40.10
af_E9QH38_31_159_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9386 173 237 1.25.40.10
af_A0A0P0X6Y8_38_178_1.25.40.10 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat;Tetratricopeptide repeat domain 0.9335 173 240 1.25.40.10
ID Description Score Start End GO Terms
AF-A0A1T5BTZ3-F1-model_v4 Regulator of sirC expression, contains transglutaminase-like and TPR domains 0.9785 1 256
AF-A0A1T5BTZ3-F1-model_v4 Regulator of sirC expression, contains transglutaminase-like and TPR domains 0.9748 1 256
AF-A0A1F6PUI3-F1-model_v4 Uncharacterized protein 0.9625 169 255
AF-A0A2U1VUM2-F1-model_v4 Protein SirB1 N-terminal domain-containing protein 0.9599 2 256
AF-A0A2M8TZE4-F1-model_v4 Protein SirB1 N-terminal domain-containing protein 0.9576 2 253

Feature Viewer

pLDDT pTM Quality
92.67 0.9 High
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Predicted Structure (AlphaFold2)

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